TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3562100.2.1
(759 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK121441.1| Oryza sativa (japonica cultivar-group) cDNA... 237 1e-060
gb|CB679715.1|CB679715 OSJNEf03J03.f OSJNEf Oryza sativa (j... 237 2e-060
gb|CB685153.1|CB685153 OSJNEf15F10.f OSJNEf Oryza sativa (j... 237 2e-060
dbj|AK061366.1| Oryza sativa (japonica cultivar-group) cDNA... 237 2e-060
ref|NM_190765.1| Oryza sativa (japonica cultivar-group), p... 237 2e-060
dbj|AK121867.1| Oryza sativa (japonica cultivar-group) cDNA... 223 2e-056
gb|CA999153.1|CA999153 S234N_C11 Rice cold stress germinati... 221 8e-056
gb|CB653924.1|CB653924 OSJNEc05G06.r OSJNEc Oryza sativa (j... 218 5e-055
dbj|AK059283.1| Oryza sativa (japonica cultivar-group) cDNA... 218 5e-055
ref|XM_475304.1| Oryza sativa (japonica cultivar-group), p... 216 2e-054
gb|AACV01002753.1| Oryza sativa (japonica cultivar-group) c... 102 1e-048
dbj|AP003286.3| Oryza sativa (japonica cultivar-group) geno... 102 1e-045
gb|AACV01012264.1| Oryza sativa (japonica cultivar-group) c... 102 2e-041
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 102 8e-041
dbj|AK059220.1| Oryza sativa (japonica cultivar-group) cDNA... 170 2e-040
gb|AC105318.4| Oryza sativa (japonica cultivar-group) chrom... 102 3e-040
dbj|AK071119.1| Oryza sativa (japonica cultivar-group) cDNA... 165 5e-039
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 102 2e-037
gb|C99208.1|C99208 C99208 Rice panicle at ripening stage Or... 79 1e-036
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 102 3e-036
gb|AU030027.1|AU030027 AU030027 Rice cDNA from immature lea... 150 1e-034
gb|AU030028.1|AU030028 AU030028 Rice cDNA from immature lea... 135 2e-033
gb|AU077950.1|AU077950 AU077950 Rice callus Oryza sativa (j... 137 2e-030
gb|AACV01012610.1| Oryza sativa (japonica cultivar-group) c... 81 4e-028
dbj|AK069386.1| Oryza sativa (japonica cultivar-group) cDNA... 90 1e-027
gb|AC108499.3| Oryza sativa (japonica cultivar-group) chrom... 81 2e-026
gb|AACV01003836.1| Oryza sativa (japonica cultivar-group) c... 79 4e-026
ref|NT_107218.1| Oryza sativa (japonica cultivar-group) 81 1e-025
dbj|AP005428.2| Oryza sativa (japonica cultivar-group) geno... 79 9e-025
gb|CF323560.1|CF323560 HDN--04-C19.g1 OsHDAC1-overexpressin... 106 1e-024
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 79 1e-021
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 79 4e-021
>dbj|AK121441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140N15, full
insert sequence
Length = 2362
Score = 237 bits (512), Expect = 1e-060
Identities = 100/119 (84%), Positives = 105/119 (88%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPR+GEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 1629 SKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 1808
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
LYIGDIFLVNS EIIRPNLSIREGIEIIVSGGMTMPQVI SLEPTPRKSQN+RL+R+ T
Sbjct: 1809 LYIGDIFLVNSGEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT 1985
Score = 187 bits (402), Expect = 2e-045
Identities = 85/121 (70%), Positives = 95/121 (78%)
Frame = -3 / -1
Query: 364 HTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIY 185
H V+ L +R FWLF GVGS D ITCGIVIPPETIIS+PSR+DK GLIIS EFT+ MSP+
Sbjct: 1990 HYVIILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSRMDKFGLIISPEFTRNMSPM* 1811
Query: 184 K*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXX 5
+* VGT*TLH+SSSPLSV*RT VDV+NPNAYSP RG* +IATSL A F S V T
Sbjct: 1810 R*FVGT*TLHSSSSPLSV*RTTVDVINPNAYSPIRG*RIIATSLKAVVF*SGEMAVLTCF 1631
Query: 4 D 2
D
Sbjct: 1630 D 1628
Score = 124 bits (265), Expect = 1e-026
Identities = 58/117 (49%), Positives = 72/117 (61%)
Frame = -2 / -3
Query: 383 HACLIQSYCPHSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQ 204
H + C +S+*TD+LALP F+ DHL NYF +F+N I Y V+Q
Sbjct: 2009 HLSSRMTLCHYSI*TDILALPWGGFKGRDHLWHSHSSRNNYFDSFSNG*IWSYYLPRVHQ 1830
Query: 203 KDVTNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
K VTN+ MI WHIN QFF+ FV LKN+ *CY+SKCIFTNT MTN FF+ + I
Sbjct: 1829 KYVTNVKMICWHINAAQFFVAFVSLKNNS*CYKSKCIFTNTWMTNYRNFFKSCCVLI 1659
Score = 118 bits (252), Expect = 8e-025
Identities = 67/118 (56%), Positives = 70/118 (59%)
Frame = +1 / +1
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
HQ L QI KK + VI VLVNMHLD *HQ FFR TK KNC FMCQ I
Sbjct: 1627 HQSKSALPFHQIKTQQLLKKLR*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQI 1806
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE* 354
I+ LVT FW*T + * I F K K*LF EE*LC R*S N GRAR SV* E*
Sbjct: 1807 IFTLVTYFW*TLGR**DQIYPFEKESK*LFLEE*LCHR*SRPLNPPQGRARISV*IE* 1980
Score = 105 bits (224), Expect = 6e-021
Identities = 63/121 (52%), Positives = 70/121 (57%)
Frame = -1 / -2
Query: 363 ILSSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRCHQYI 184
I+S L+G SGSS V T SP A*SFL KQLF L E N L +S P+ CHQ
Sbjct: 1989 IMSLFYLDGYSGSSLGWVQGTRSPVA*SFLQKQLFRFLLEWINLVLLSPQSSPEICHQCK 1810
Query: 183 NDWLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDLXXXXXXXAL 4
+D LAHK T+L LC SEE LML*IQMHIHQ+ DD L* L DL AL
Sbjct: 1809 DDLLAHKRCTVLRRLCQSEEQQLML*IQMHIHQYVDDELSQLL*KLLCFDLVKWQC*LAL 1630
Query: 3 M 1
M
Sbjct: 1629 M 1627
>gb|CB679715.1|CB679715 OSJNEf03J03.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03J03 5', mRNA sequence
Length = 807
Score = 237 bits (511), Expect = 2e-060
Identities = 100/119 (84%), Positives = 105/119 (88%)
Frame = +3 / +2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPR+GEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 386 SKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 565
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
LYIGDIFLVNS EIIRPNLSIREGIEIIVSGGMTMPQVI SLEPTPRKSQN+RL+R+ T
Sbjct: 566 LYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT 742
Score = 188 bits (404), Expect = 9e-046
Identities = 85/121 (70%), Positives = 96/121 (79%)
Frame = -3 / -1
Query: 364 HTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIY 185
H V+ L +R FWLF GVGS D ITCGIVIPPETIIS+PSR+DK GLIIS+EFT+ MSP+
Sbjct: 747 HYVIILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSRMDKFGLIISSEFTRNMSPM* 568
Query: 184 K*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXX 5
+* VGT*TLH+SSSPLSV*RT VDV+NPNAYSP RG* +IATSL A F S V T
Sbjct: 567 R*FVGT*TLHSSSSPLSV*RTTVDVINPNAYSPIRG*RIIATSLKAVVF*SGEMAVLTCF 388
Query: 4 D 2
D
Sbjct: 387 D 385
Score = 123 bits (263), Expect = 2e-026
Identities = 58/117 (49%), Positives = 72/117 (61%)
Frame = -2 / -3
Query: 383 HACLIQSYCPHSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQ 204
H + C +S+*TD+LALP F+ DHL NYF +F+N I Y V+Q
Sbjct: 766 HLSSRMTLCHYSI*TDILALPWGGFKGRDHLWHSHSSRNNYFDSFSNG*IWSYYLLRVHQ 587
Query: 203 KDVTNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
K VTN+ MI WHIN QFF+ FV LKN+ *CY+SKCIFTNT MTN FF+ + I
Sbjct: 586 KYVTNVKMICWHINAAQFFVAFVSLKNNS*CYKSKCIFTNTWMTNYRNFFKSCCVLI 416
Score = 118 bits (252), Expect = 8e-025
Identities = 67/118 (56%), Positives = 70/118 (59%)
Frame = +1 / +3
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
HQ L QI KK + VI VLVNMHLD *HQ FFR TK KNC FMCQ I
Sbjct: 384 HQSKSALPFHQIKTQQLLKKLR*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQI 563
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE* 354
I+ LVT FW*T + * I F K K*LF EE*LC R*S N GRAR SV* E*
Sbjct: 564 IFTLVTYFW*TLRR**DQIYPFEKESK*LFLEE*LCHR*SRPLNPPQGRARISV*IE* 737
Score = 105 bits (224), Expect = 6e-021
Identities = 63/121 (52%), Positives = 70/121 (57%)
Frame = -1 / -2
Query: 363 ILSSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRCHQYI 184
I+S L+G SGSS V T SP A*SFL KQLF L E N L +S P+ CHQ
Sbjct: 746 IMSLFYLDGYSGSSLGWVQGTRSPVA*SFLQKQLFRFLLEWINLVLLSPQSSPEICHQCK 567
Query: 183 NDWLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDLXXXXXXXAL 4
+D LAHK T+L LC SEE LML*IQMHIHQ+ DD L* L DL AL
Sbjct: 566 DDLLAHKRCTVLRRLCQSEEQQLML*IQMHIHQYVDDELSQLL*KLLCFDLVKWQC*LAL 387
Query: 3 M 1
M
Sbjct: 386 M 384
>gb|CB685153.1|CB685153 OSJNEf15F10.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15F10 5', mRNA sequence
Length = 758
Score = 237 bits (511), Expect = 2e-060
Identities = 100/119 (84%), Positives = 105/119 (88%)
Frame = +3 / +2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPR+GEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 380 SKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 559
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
LYIGDIFLVNS EIIRPNLSIREGIEIIVSGGMTMPQVI SLEPTPRKSQN+RL+R+ T
Sbjct: 560 LYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT 736
Score = 188 bits (404), Expect = 9e-046
Identities = 85/121 (70%), Positives = 96/121 (79%)
Frame = -3 / -3
Query: 364 HTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIY 185
H V+ L +R FWLF GVGS D ITCGIVIPPETIIS+PSR+DK GLIIS+EFT+ MSP+
Sbjct: 741 HYVIILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSRMDKFGLIISSEFTRNMSPM* 562
Query: 184 K*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXX 5
+* VGT*TLH+SSSPLSV*RT VDV+NPNAYSP RG* +IATSL A F S V T
Sbjct: 561 R*FVGT*TLHSSSSPLSV*RTTVDVINPNAYSPIRG*RIIATSLKAVVF*SGEMAVLTCF 382
Query: 4 D 2
D
Sbjct: 381 D 379
Score = 123 bits (263), Expect = 2e-026
Identities = 57/109 (52%), Positives = 70/109 (64%)
Frame = -2 / -2
Query: 359 CPHSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQKDVTNI*M 180
C +S+*TD+LALP F+ DHL NYF +F+N I Y V+QK VTN+ M
Sbjct: 736 CHYSI*TDILALPGGGFKGRDHLWHSHSSRNNYFDSFSNG*IWSYYLLRVHQKYVTNVKM 557
Query: 179 IGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
I WHIN QFF+ FV LKN+ *CY+SKCIFTNT MTN FF+ + I
Sbjct: 556 ICWHINAAQFFVAFVSLKNNS*CYKSKCIFTNTWMTNYRNFFKSCCVLI 410
Score = 117 bits (251), Expect = 1e-024
Identities = 67/118 (56%), Positives = 70/118 (59%)
Frame = +1 / +3
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
HQ L QI KK + VI VLVNMHLD *HQ FFR TK KNC FMCQ I
Sbjct: 378 HQSKSALPFHQIKTQQLLKKLR*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQI 557
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE* 354
I+ LVT FW*T + * I F K K*LF EE*LC R*S N GRAR SV* E*
Sbjct: 558 IFTLVTYFW*TLRR**DQIYPFEKESK*LFLEE*LCHR*SRPLNPPPGRARISV*IE* 731
Score = 105 bits (224), Expect = 6e-021
Identities = 63/121 (52%), Positives = 70/121 (57%)
Frame = -1 / -1
Query: 363 ILSSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRCHQYI 184
I+S L+G SGSS V T SP A*SFL KQLF L E N L +S P+ CHQ
Sbjct: 740 IMSLFYLDGYSGSSWGWVQGTRSPVA*SFLQKQLFRFLLEWINLVLLSPQSSPEICHQCK 561
Query: 183 NDWLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDLXXXXXXXAL 4
+D LAHK T+L LC SEE LML*IQMHIHQ+ DD L* L DL AL
Sbjct: 560 DDLLAHKRCTVLRRLCQSEEQQLML*IQMHIHQYVDDELSQLL*KLLCFDLVKWQC*LAL 381
Query: 3 M 1
M
Sbjct: 380 M 378
>dbj|AK061366.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D06, full
insert sequence
Length = 1271
Score = 237 bits (511), Expect = 2e-060
Identities = 100/119 (84%), Positives = 105/119 (88%)
Frame = +3 / +2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPR+GEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 545 SKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 724
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
LYIGDIFLVNS EIIRPNLSIREGIEIIVSGGMTMPQVI SLEPTPRKSQN+RL+R+ T
Sbjct: 725 LYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT 901
Score = 188 bits (404), Expect = 9e-046
Identities = 85/121 (70%), Positives = 96/121 (79%)
Frame = -3 / -3
Query: 364 HTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIY 185
H V+ L +R FWLF GVGS D ITCGIVIPPETIIS+PSR+DK GLIIS+EFT+ MSP+
Sbjct: 906 HYVIILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSRMDKFGLIISSEFTRNMSPM* 727
Query: 184 K*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXX 5
+* VGT*TLH+SSSPLSV*RT VDV+NPNAYSP RG* +IATSL A F S V T
Sbjct: 726 R*FVGT*TLHSSSSPLSV*RTTVDVINPNAYSPIRG*RIIATSLKAVVF*SGEMAVLTCF 547
Query: 4 D 2
D
Sbjct: 546 D 544
Score = 123 bits (263), Expect = 2e-026
Identities = 58/117 (49%), Positives = 72/117 (61%)
Frame = -2 / -2
Query: 383 HACLIQSYCPHSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQ 204
H + C +S+*TD+LALP F+ DHL NYF +F+N I Y V+Q
Sbjct: 925 HLSSRMTLCHYSI*TDILALPWGGFKGRDHLWHSHSSRNNYFDSFSNG*IWSYYLLRVHQ 746
Query: 203 KDVTNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
K VTN+ MI WHIN QFF+ FV LKN+ *CY+SKCIFTNT MTN FF+ + I
Sbjct: 745 KYVTNVKMICWHINAAQFFVAFVSLKNNS*CYKSKCIFTNTWMTNYRNFFKSCCVLI 575
Score = 118 bits (252), Expect = 8e-025
Identities = 67/118 (56%), Positives = 70/118 (59%)
Frame = +1 / +3
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
HQ L QI KK + VI VLVNMHLD *HQ FFR TK KNC FMCQ I
Sbjct: 543 HQSKSALPFHQIKTQQLLKKLR*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQI 722
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE* 354
I+ LVT FW*T + * I F K K*LF EE*LC R*S N GRAR SV* E*
Sbjct: 723 IFTLVTYFW*TLRR**DQIYPFEKESK*LFLEE*LCHR*SRPLNPPQGRARISV*IE* 896
Score = 105 bits (224), Expect = 6e-021
Identities = 63/121 (52%), Positives = 70/121 (57%)
Frame = -1 / -1
Query: 363 ILSSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRCHQYI 184
I+S L+G SGSS V T SP A*SFL KQLF L E N L +S P+ CHQ
Sbjct: 905 IMSLFYLDGYSGSSLGWVQGTRSPVA*SFLQKQLFRFLLEWINLVLLSPQSSPEICHQCK 726
Query: 183 NDWLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDLXXXXXXXAL 4
+D LAHK T+L LC SEE LML*IQMHIHQ+ DD L* L DL AL
Sbjct: 725 DDLLAHKRCTVLRRLCQSEEQQLML*IQMHIHQYVDDELSQLL*KLLCFDLVKWQC*LAL 546
Query: 3 M 1
M
Sbjct: 545 M 543
>ref|NM_190765.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 780
Score = 237 bits (511), Expect = 2e-060
Identities = 100/119 (84%), Positives = 105/119 (88%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPR+GEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 421 SKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 600
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
LYIGDIFLVNS EIIRPNLSIREGIEIIVSGGMTMPQVI SLEPTPRKSQN+RL+R+ T
Sbjct: 601 LYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT 777
Score = 185 bits (398), Expect = 6e-045
Identities = 84/119 (70%), Positives = 95/119 (79%)
Frame = -3 / -2
Query: 358 VLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK* 179
V+ L +R FWLF GVGS D ITCGIVIPPETIIS+PSR+DK GLIIS+EFT+ MSP+ +*
Sbjct: 776 VIILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSRMDKFGLIISSEFTRNMSPM*R* 597
Query: 178 LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXXD 2
VGT*TLH+SSSPLSV*RT VDV+NPNAYSP RG* +IATSL A F S V T D
Sbjct: 596 FVGT*TLHSSSSPLSV*RTTVDVINPNAYSPIRG*RIIATSLKAVVF*SGEMAVLTCFD 420
Score = 122 bits (262), Expect = 3e-026
Identities = 57/109 (52%), Positives = 70/109 (64%)
Frame = -2 / -1
Query: 359 CPHSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQKDVTNI*M 180
C +S+*TD+LALP F+ DHL NYF +F+N I Y V+QK VTN+ M
Sbjct: 777 CHYSI*TDILALPWGGFKGRDHLWHSHSSRNNYFDSFSNG*IWSYYLLRVHQKYVTNVKM 598
Query: 179 IGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
I WHIN QFF+ FV LKN+ *CY+SKCIFTNT MTN FF+ + I
Sbjct: 597 ICWHINAAQFFVAFVSLKNNS*CYKSKCIFTNTWMTNYRNFFKSCCVLI 451
Score = 118 bits (252), Expect = 8e-025
Identities = 67/118 (56%), Positives = 70/118 (59%)
Frame = +1 / +2
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
HQ L QI KK + VI VLVNMHLD *HQ FFR TK KNC FMCQ I
Sbjct: 419 HQSKSALPFHQIKTQQLLKKLR*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQI 598
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE* 354
I+ LVT FW*T + * I F K K*LF EE*LC R*S N GRAR SV* E*
Sbjct: 599 IFTLVTYFW*TLRR**DQIYPFEKESK*LFLEE*LCHR*SRPLNPPQGRARISV*IE* 772
>dbj|AK121867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103I02, full
insert sequence
Length = 1424
Score = 223 bits (482), Expect = 2e-056
Identities = 94/130 (72%), Positives = 107/130 (82%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAIISHPR+GEYAFGFITSTM+LQTDKGDEELCSVYVPTNH
Sbjct: 792 SKQVSTAVSPDQNTTAFKEVAIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNH 971
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV 362
LYIGDIFLV S EIIRPNLSIREGIEIIVSGGMTMPQVI + TP K Q+ RL+R+ +
Sbjct: 972 LYIGDIFLVRSEEIIRPNLSIREGIEIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRMMSA 1151
Query: 363 *LYEACMKVM 392
*+++ C +++
Sbjct: 1152 *VHQVCPELL 1181
Score = 172 bits (371), Expect = 3e-041
Identities = 80/122 (65%), Positives = 93/122 (76%)
Frame = -3 / -2
Query: 367 SHTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPI 188
+H ++ L KR GV ITCG+VIPPET+IS+PSR+DK GLIIS++ TKKMSPI
Sbjct: 1156 THALIILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSRMDKFGLIISSDLTKKMSPI 977
Query: 187 YK*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTX 8
Y+*LVGT TLH+SSSPLSV*R +VDVMNPNAYSP RG*L+IATSLNA F S V T
Sbjct: 976 YR*LVGTYTLHSSSSPLSV*RIIVDVMNPNAYSPIRG*LIIATSLNAVVF*SGETAVLTC 797
Query: 7 XD 2
D
Sbjct: 796 FD 791
Score = 144 bits (309), Expect = 1e-032
Identities = 70/123 (56%), Positives = 77/123 (62%)
Frame = -2 / -1
Query: 380 ACLIQSYCPHSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQK 201
A L+ S HSV*T L L C +HLR N FY F+N QI PYN Q+
Sbjct: 1169 ADLMYSRTHHSV*TGALTLMGCLSWCCNHLRHGHSSRNNDFYPFSNGQIRPYNLLRPNQE 990
Query: 200 DVTNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXIXXXX 21
DVT+I*MIGWHI T QFFITFV LK+H CYESKCIFTNTGMTN C FF+C I I
Sbjct: 989 DVTDI*MIGWHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMTNYCNFFKCRCILIW*NS 810
Query: 20 SXN 12
S N
Sbjct: 809 SAN 801
Score = 139 bits (299), Expect = 3e-031
Identities = 74/127 (58%), Positives = 82/127 (64%)
Frame = +1 / +1
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
H+ L QI H KK Q LVIPVLVNMHLDS*H+ FR TKVMKNC V+MCQPI
Sbjct: 790 HRSKLALLFHQIKIQRHLKKLQ*LVIPVLVNMHLDS*HRR*SFRLTKVMKNCAVYMCQPI 969
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE*GQ 360
IYI VTS W +L*G IC F K *K LF EE* CRR* H ++H R R V*TE*
Sbjct: 970 IYISVTSSWLGLRRL*GRICPFEKG*KSLFLEE*PCRR*LQHQDKHPIRVRAPV*TE**V 1149
Query: 361 YDCMRHA 381
+ +R A
Sbjct: 1150 REYIRSA 1170
Score = 131 bits (280), Expect = 1e-028
Identities = 67/115 (58%), Positives = 75/115 (65%)
Frame = -1 / -3
Query: 375 PHTVILSSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRC 196
P + SS CLNG S V V V SPAA SFL KQ FL L E TN AL* ++ P+RC
Sbjct: 1164 PDVLTHSSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FLSLLEWTNSAL*SPQT*PRRC 985
Query: 195 HQYINDWLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDL 31
H+YI+DWLAH H T+LHHLC SE ML*IQMHIHQ+GDD L*M DL
Sbjct: 984 HRYIDDWLAHIHCTVLHHLCQSEGSSSML*IQMHIHQYGDD*LLQLL*MPLYFDL 820
>gb|CA999153.1|CA999153 S234N_C11 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 676
Score = 221 bits (477), Expect = 8e-056
Identities = 93/130 (71%), Positives = 106/130 (81%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAIISHPR+GEYAFGFITSTM+LQTDKGDEELCSVYVPTNH
Sbjct: 159 SKQVSTAVSPDQNTTAFKEVAIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNH 338
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV 362
LYIGDIFLV S EIIRPNLSIREGIEIIVSGGMTMP VI + TP K Q+ RL+R+ +
Sbjct: 339 LYIGDIFLVRSEEIIRPNLSIREGIEIIVSGGMTMPHVIAAPGQTPHKGQSTRLNRMMSA 518
Query: 363 *LYEACMKVM 392
*+++ C +++
Sbjct: 519 *VHQVCPELL 548
Score = 172 bits (371), Expect = 3e-041
Identities = 80/122 (65%), Positives = 93/122 (76%)
Frame = -3 / -1
Query: 367 SHTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPI 188
+H ++ L KR GV ITCG+VIPPET+IS+PSR+DK GLIIS++ TKKMSPI
Sbjct: 523 THALIILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSRMDKFGLIISSDLTKKMSPI 344
Query: 187 YK*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTX 8
Y+*LVGT TLH+SSSPLSV*R +VDVMNPNAYSP RG*L+IATSLNA F S V T
Sbjct: 343 YR*LVGTYTLHSSSSPLSV*RIIVDVMNPNAYSPIRG*LIIATSLNAVVF*SGETAVLTC 164
Query: 7 XD 2
D
Sbjct: 163 FD 158
Score = 143 bits (307), Expect = 2e-032
Identities = 69/123 (56%), Positives = 77/123 (62%)
Frame = -2 / -3
Query: 380 ACLIQSYCPHSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQK 201
A L+ S HSV*T L L C +H+R N FY F+N QI PYN Q+
Sbjct: 536 ADLMYSRTHHSV*TGALTLMGCLSWCCNHMRHGHSSRNNDFYPFSNGQIRPYNLLRPNQE 357
Query: 200 DVTNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXIXXXX 21
DVT+I*MIGWHI T QFFITFV LK+H CYESKCIFTNTGMTN C FF+C I I
Sbjct: 356 DVTDI*MIGWHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMTNYCNFFKCRCILIW*NS 177
Query: 20 SXN 12
S N
Sbjct: 176 SAN 168
Score = 137 bits (293), Expect = 2e-030
Identities = 73/127 (57%), Positives = 81/127 (63%)
Frame = +1 / +1
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
H+ L QI H KK Q LVIPVLVNMHLDS*H+ FR TKVMKNC V+MCQPI
Sbjct: 157 HRSKLALLFHQIKIQRHLKKLQ*LVIPVLVNMHLDS*HRR*SFRLTKVMKNCAVYMCQPI 336
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE*GQ 360
IYI VTS W +L*G IC F K *K LF EE* CR * H ++H R R V*TE*
Sbjct: 337 IYISVTSSWLGLRRL*GRICPFEKG*KSLFLEE*PCRM*LQHQDKHPIRVRAPV*TE**V 516
Query: 361 YDCMRHA 381
+ +R A
Sbjct: 517 REYIRSA 537
Score = 127 bits (271), Expect = 2e-027
Identities = 66/115 (57%), Positives = 74/115 (64%)
Frame = -1 / -2
Query: 375 PHTVILSSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRC 196
P + SS CLNG S V V V S AA SFL KQ FL L E TN AL* ++ P+RC
Sbjct: 531 PDVLTHSSFCLNGCSDPYGVFVLVLQSHAAWSFLQKQ*FLSLLEWTNSAL*SPQT*PRRC 352
Query: 195 HQYINDWLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDL 31
H+YI+DWLAH H T+LHHLC SE ML*IQMHIHQ+GDD L*M DL
Sbjct: 351 HRYIDDWLAHIHCTVLHHLCQSEGSSSML*IQMHIHQYGDD*LLQLL*MPLYFDL 187
>gb|CB653924.1|CB653924 OSJNEc05G06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05G06 3', mRNA sequence
Length = 788
Score = 218 bits (471), Expect = 5e-055
Identities = 93/124 (75%), Positives = 103/124 (83%)
Frame = +3 / -2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAIISHPR+GEYAFGFITSTM+LQTDKGDEELCSVYVPTNH
Sbjct: 610 SKQVSTAVSPDQNTTAFKEVAIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNH 431
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV 362
LYIGDIFLV S EIIRPNLSIREGIEIIVSGGMTMPQVI + TP K Q+ RL+R+ +
Sbjct: 430 LYIGDIFLVRSEEIIRPNLSIREGIEIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRMMSA 251
Query: 363 *LYE 374
*+++
Sbjct: 250 *VHQ 239
Score = 172 bits (371), Expect = 3e-041
Identities = 80/122 (65%), Positives = 93/122 (76%)
Frame = -3 / +3
Query: 367 SHTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPI 188
+H ++ L KR GV ITCG+VIPPET+IS+PSR+DK GLIIS++ TKKMSPI
Sbjct: 246 THALIILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSRMDKFGLIISSDLTKKMSPI 425
Query: 187 YK*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTX 8
Y+*LVGT TLH+SSSPLSV*R +VDVMNPNAYSP RG*L+IATSLNA F S V T
Sbjct: 426 YR*LVGTYTLHSSSSPLSV*RIIVDVMNPNAYSPIRG*LIIATSLNAVVF*SGETAVLTC 605
Query: 7 XD 2
D
Sbjct: 606 FD 611
Score = 144 bits (308), Expect = 2e-032
Identities = 69/121 (57%), Positives = 76/121 (62%)
Frame = -2 / +2
Query: 374 LIQSYCPHSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQKDV 195
L+ S HSV*T L L C +HLR N FY F+N QI PYN Q+DV
Sbjct: 239 LMYSRTHHSV*TGALTLMGCLSWCCNHLRHGHSSRNNDFYPFSNGQIRPYNLLRPNQEDV 418
Query: 194 TNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXIXXXXSX 15
T+I*MIGWHI T QFFITFV LK+H CYESKCIFTNTGMTN C FF+C I I S
Sbjct: 419 TDI*MIGWHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMTNYCNFFKCRCILIW*NSSA 598
Query: 14 N 12
N
Sbjct: 599 N 601
Score = 139 bits (298), Expect = 4e-031
Identities = 72/118 (61%), Positives = 78/118 (66%)
Frame = +1 / -3
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
H+ L QI H KK Q LVIPVLVNMHLDS*H+ FR TKVMKNC V+MCQPI
Sbjct: 612 HRSKLALLFHQIKIQRHLKKLQ*LVIPVLVNMHLDS*HRR*SFRLTKVMKNCAVYMCQPI 433
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE* 354
IYI VTS W +L*G IC F K *K LF EE* CRR* H ++H R R V*TE*
Sbjct: 432 IYISVTSSWLGLRRL*GRICPFEKG*KSLFLEE*PCRR*LQHQDKHPIRVRAPV*TE* 259
Score = 129 bits (277), Expect = 3e-028
Identities = 66/109 (60%), Positives = 73/109 (66%)
Frame = -1 / +1
Query: 357 SSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRCHQYIND 178
SS CLNG S V V V SPAA SFL KQ FL L E TN AL* ++ P+RCH+YI+D
Sbjct: 256 SSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FLSLLEWTNSAL*SPQT*PRRCHRYIDD 435
Query: 177 WLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDL 31
WLAH H T+LHHLC SE ML*IQMHIHQ+GDD L*M DL
Sbjct: 436 WLAHIHCTVLHHLCQSEGSSSML*IQMHIHQYGDD*LLQLL*MPLYFDL 582
>dbj|AK059283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D06, full
insert sequence
Length = 1253
Score = 218 bits (471), Expect = 5e-055
Identities = 93/124 (75%), Positives = 103/124 (83%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAIISHPR+GEYAFGFITSTM+LQTDKGDEELCSVYVPTNH
Sbjct: 612 SKQVSTAVSPDQNTTAFKEVAIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNH 791
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV 362
LYIGDIFLV S EIIRPNLSIREGIEIIVSGGMTMPQVI + TP K Q+ RL+R+ +
Sbjct: 792 LYIGDIFLVRSEEIIRPNLSIREGIEIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRMMSA 971
Query: 363 *LYE 374
*+++
Sbjct: 972 *VHQ 983
Score = 172 bits (371), Expect = 3e-041
Identities = 80/122 (65%), Positives = 93/122 (76%)
Frame = -3 / -2
Query: 367 SHTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPI 188
+H ++ L KR GV ITCG+VIPPET+IS+PSR+DK GLIIS++ TKKMSPI
Sbjct: 976 THALIILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSRMDKFGLIISSDLTKKMSPI 797
Query: 187 YK*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTX 8
Y+*LVGT TLH+SSSPLSV*R +VDVMNPNAYSP RG*L+IATSLNA F S V T
Sbjct: 796 YR*LVGTYTLHSSSSPLSV*RIIVDVMNPNAYSPIRG*LIIATSLNAVVF*SGETAVLTC 617
Query: 7 XD 2
D
Sbjct: 616 FD 611
Score = 144 bits (308), Expect = 2e-032
Identities = 69/121 (57%), Positives = 76/121 (62%)
Frame = -2 / -1
Query: 374 LIQSYCPHSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQKDV 195
L+ S HSV*T L L C +HLR N FY F+N QI PYN Q+DV
Sbjct: 983 LMYSRTHHSV*TGALTLMGCLSWCCNHLRHGHSSRNNDFYPFSNGQIRPYNLLRPNQEDV 804
Query: 194 TNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXIXXXXSX 15
T+I*MIGWHI T QFFITFV LK+H CYESKCIFTNTGMTN C FF+C I I S
Sbjct: 803 TDI*MIGWHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMTNYCNFFKCRCILIW*NSSA 624
Query: 14 N 12
N
Sbjct: 623 N 621
Score = 139 bits (298), Expect = 4e-031
Identities = 72/118 (61%), Positives = 78/118 (66%)
Frame = +1 / +1
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
H+ L QI H KK Q LVIPVLVNMHLDS*H+ FR TKVMKNC V+MCQPI
Sbjct: 610 HRSKLALLFHQIKIQRHLKKLQ*LVIPVLVNMHLDS*HRR*SFRLTKVMKNCAVYMCQPI 789
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE* 354
IYI VTS W +L*G IC F K *K LF EE* CRR* H ++H R R V*TE*
Sbjct: 790 IYISVTSSWLGLRRL*GRICPFEKG*KSLFLEE*PCRR*LQHQDKHPIRVRAPV*TE* 963
Score = 129 bits (277), Expect = 3e-028
Identities = 66/109 (60%), Positives = 73/109 (66%)
Frame = -1 / -3
Query: 357 SSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRCHQYIND 178
SS CLNG S V V V SPAA SFL KQ FL L E TN AL* ++ P+RCH+YI+D
Sbjct: 966 SSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FLSLLEWTNSAL*SPQT*PRRCHRYIDD 787
Query: 177 WLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDL 31
WLAH H T+LHHLC SE ML*IQMHIHQ+GDD L*M DL
Sbjct: 786 WLAHIHCTVLHHLCQSEGSSSML*IQMHIHQYGDD*LLQLL*MPLYFDL 640
>ref|XM_475304.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 783
Score = 216 bits (466), Expect = 2e-054
Identities = 93/121 (76%), Positives = 100/121 (82%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAIISHPR+GEYAFGFITSTM+LQTDKGDEELCSVYVPTNH
Sbjct: 421 SKQVSTAVSPDQNTTAFKEVAIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNH 600
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV 362
LYIGDIFLV S EIIRPNLSIREGIEIIVSGGMTMPQVI + TP K Q+ RL+R+ +
Sbjct: 601 LYIGDIFLVRSEEIIRPNLSIREGIEIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRMMSA 780
Query: 363 * 365
*
Sbjct: 781 * 783
Score = 172 bits (370), Expect = 4e-041
Identities = 80/121 (66%), Positives = 92/121 (76%)
Frame = -3 / -2
Query: 364 HTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIY 185
H ++ L KR GV ITCG+VIPPET+IS+PSR+DK GLIIS++ TKKMSPIY
Sbjct: 782 HALIILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSRMDKFGLIISSDLTKKMSPIY 603
Query: 184 K*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXX 5
+*LVGT TLH+SSSPLSV*R +VDVMNPNAYSP RG*L+IATSLNA F S V T
Sbjct: 602 R*LVGTYTLHSSSSPLSV*RIIVDVMNPNAYSPIRG*LIIATSLNAVVF*SGETAVLTCF 423
Query: 4 D 2
D
Sbjct: 422 D 420
Score = 142 bits (305), Expect = 4e-032
Identities = 67/114 (58%), Positives = 73/114 (64%)
Frame = -2 / -1
Query: 353 HSV*TDVLALPRCWFQ*HDHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQKDVTNI*MIG 174
HSV*T L L C +HLR N FY F+N QI PYN Q+DVT+I*MIG
Sbjct: 771 HSV*TGALTLMGCLSWCCNHLRHGHSSRNNDFYPFSNGQIRPYNLLRPNQEDVTDI*MIG 592
Query: 173 WHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXIXXXXSXN 12
WHI T QFFITFV LK+H CYESKCIFTNTGMTN C FF+C I I S N
Sbjct: 591 WHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMTNYCNFFKCRCILIW*NSSAN 430
Score = 139 bits (298), Expect = 4e-031
Identities = 72/118 (61%), Positives = 78/118 (66%)
Frame = +1 / +2
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
H+ L QI H KK Q LVIPVLVNMHLDS*H+ FR TKVMKNC V+MCQPI
Sbjct: 419 HRSKLALLFHQIKIQRHLKKLQ*LVIPVLVNMHLDS*HRR*SFRLTKVMKNCAVYMCQPI 598
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE* 354
IYI VTS W +L*G IC F K *K LF EE* CRR* H ++H R R V*TE*
Sbjct: 599 IYISVTSSWLGLRRL*GRICPFEKG*KSLFLEE*PCRR*LQHQDKHPIRVRAPV*TE* 772
Score = 129 bits (277), Expect = 3e-028
Identities = 66/109 (60%), Positives = 73/109 (66%)
Frame = -1 / -3
Query: 357 SSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRCHQYIND 178
SS CLNG S V V V SPAA SFL KQ FL L E TN AL* ++ P+RCH+YI+D
Sbjct: 775 SSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FLSLLEWTNSAL*SPQT*PRRCHRYIDD 596
Query: 177 WLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDL 31
WLAH H T+LHHLC SE ML*IQMHIHQ+GDD L*M DL
Sbjct: 595 WLAHIHCTVLHHLCQSEGSSSML*IQMHIHQYGDD*LLQLL*MPLYFDL 449
>gb|AACV01002753.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002753, whole
genome shotgun sequence
Length = 18525
Score = 102 bits (218), Expect(4) = 1e-048
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +3 / -2
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
QTDKGDEELCSVYVPTNHLYIGDIFLVNS EIIRPNLSIREGI
Sbjct: 13778 QTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGI 13650
Score = 72.1 bits (151), Expect(3) = 3e-031
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = -3 / +1
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV 131
+PSR+DK GLIIS+EFT+ MSP+ +* VGT*TLH+SSSPLSV
Sbjct: 13651 IPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV 13776
Score = 71.2 bits (149), Expect(4) = 1e-048
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +3 / -2
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
EIIVSGGMTMPQVI SLEPTPRKSQN+RL+R+ T
Sbjct: 13457 EIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT 13356
Score = 67.5 bits (141), Expect(4) = 1e-048
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +3 / -1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAII HPR+GEYAFGFITST+VLQ
Sbjct: 14031 DQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQ 13933
Score = 67.0 bits (140), Expect(3) = 3e-031
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -3 / +1
Query: 364 HTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIIS 257
H V+ L +R FWLF GVGS D ITCGIVIPPETIIS
Sbjct: 13351 HYVIILFRRIFWLFLGVGSRDAITCGIVIPPETIIS 13458
Score = 51.0 bits (105), Expect(3) = 3e-031
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = -3 / +2
Query: 130 *RTMVDVMNPNAYSPTRG*LMIATSLNAXXF 38
*RT VDV+NPNAYSP RG* +IATSL A F
Sbjct: 13934 *RTTVDVINPNAYSPIRG*RIIATSLKAVVF 14026
Score = 29.9 bits (59), Expect(4) = 1e-048
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 407 ACWLWIQSWGMEL 445
ACW+W +SWG E+
Sbjct: 4981 ACWVWEESWGGEV 4943
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0677H08
Length = 178830
Score = 102 bits (218), Expect(4) = 1e-045
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +3 / -3
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
QTDKGDEELCSVYVPTNHLYIGDIFLVNS EIIRPNLSIREGI
Sbjct: 39496 QTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGI 39368
Score = 72.1 bits (151), Expect(3) = 2e-029
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = -3 / +3
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV 131
+PSR+DK GLIIS+EFT+ MSP+ +* VGT*TLH+SSSPLSV
Sbjct: 39369 IPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV 39494
Score = 71.2 bits (149), Expect(4) = 1e-045
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +3 / -3
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
EIIVSGGMTMPQVI SLEPTPRKSQN+RL+R+ T
Sbjct: 39175 EIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT 39074
Score = 67.5 bits (141), Expect(4) = 1e-045
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +3 / -2
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAII HPR+GEYAFGFITST+VLQ
Sbjct: 39749 DQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQ 39651
Score = 67.0 bits (140), Expect(3) = 2e-029
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -3 / +3
Query: 364 HTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIIS 257
H V+ L +R FWLF GVGS D ITCGIVIPPETIIS
Sbjct: 39069 HYVIILFRRIFWLFLGVGSRDAITCGIVIPPETIIS 39176
Score = 51.0 bits (105), Expect(3) = 2e-029
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = -3 / +1
Query: 130 *RTMVDVMNPNAYSPTRG*LMIATSLNAXXF 38
*RT VDV+NPNAYSP RG* +IATSL A F
Sbjct: 39652 *RTTVDVINPNAYSPIRG*RIIATSLKAVVF 39744
Score = 29.9 bits (59), Expect(4) = 1e-045
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 407 ACWLWIQSWGMEL 445
ACW+W +SWG E+
Sbjct: 30701 ACWVWEESWGGEV 30663
>gb|AACV01012264.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012264, whole
genome shotgun sequence
Length = 25704
Score = 102 bits (217), Expect(3) = 2e-041
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = +3 / +1
Query: 120 MVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
+ LQTDKGDEELCSVYVPTNHLYIGDIFLV S EIIRPNLSIREGI
Sbjct: 6706 IALQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGI 6843
Score = 78.0 bits (164), Expect(3) = 1e-028
Identities = 33/48 (68%), Positives = 43/48 (89%)
Frame = -3 / -2
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
+PSR+DK GLIIS++ TKKMSPIY+*LVGT TLH+SSSPLSV + +++
Sbjct: 6842 IPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSVCKAILN 6699
Score = 71.2 bits (149), Expect(3) = 2e-041
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3 / +1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAIISHPR+GEYAFGFITSTM+LQ
Sbjct: 5980 DQNTTAFKEVAIISHPRIGEYAFGFITSTMILQ 6078
Score = 67.5 bits (141), Expect(3) = 9e-024
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -2 / -1
Query: 257 YAFTNRQIGPYNFGGVYQKDVTNI*MIGWHINTTQFFITFVCL 129
Y F+N QI PYN Q+DVT+I*MIGWHI T QFFITFV L
Sbjct: 6843 YPFSNGQIRPYNLLRPNQEDVTDI*MIGWHIYTAQFFITFVSL 6715
Score = 66.1 bits (138), Expect(3) = 4e-023
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +1 / +2
Query: 112 HQPWFFRQTKVMKNCVVFMCQPIIYILVTSFW*TPPKL*GPICLFVKA* 258
H +R TKVMKNC V+MCQPIIYI VTS W +L*G IC F K *
Sbjct: 6698 HLILLYRLTKVMKNCAVYMCQPIIYISVTSSWLGLRRL*GRICPFEKG* 6844
Score = 62.0 bits (129), Expect(3) = 1e-028
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / -1
Query: 131 LKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
LK+H CYESKCIFTNTGMTN C FF+C I I
Sbjct: 6078 LKDHRRCYESKCIFTNTGMTNYCNFFKCRCILI 5980
Score = 57.0 bits (118), Expect(3) = 9e-024
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -3 / -2
Query: 136 SV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXF 38
+ *R +VDVMNPNAYSP RG*L+IATSLNA F
Sbjct: 6083 NT*RIIVDVMNPNAYSPIRG*LIIATSLNAVVF 5985
Score = 51.9 bits (107), Expect(3) = 2e-041
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3 / +3
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV*LYE 374
EIIVSGGMTMPQVI + TP K Q+ RL+R+ + *+++
Sbjct: 6972 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRMMSA*VHQ 7088
Score = 50.6 bits (104), Expect(3) = 4e-023
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2 / +2
Query: 254 HRNNCFRRNDYAAGDHVTGTNTSEEPERPFRQSEDSMTV*G 376
+RN+CF RND+AAGD T TNT E PF+Q+++ ++ G
Sbjct: 6968 YRNHCFWRNDHAAGDCSTRTNTP*GSEHPFKQNDECVSTSG 7090
Score = 46.4 bits (95), Expect(3) = 4e-023
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +1 / +2
Query: 31 QIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFR 132
QI H KK Q LVIPVLVNMHLDS*H+ FR
Sbjct: 5978 QIKIQRHLKKLQ*LVIPVLVNMHLDS*HRR*SFR 6079
Score = 42.3 bits (86), Expect(3) = 1e-028
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -3 / -3
Query: 367 SHTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPS 248
+H ++ L KR GV ITCG+VIPPET+IS+ S
Sbjct: 7081 THALIILFKRVL*PLWGVCPGAAITCGMVIPPETMISVKS 6962
Score = 40.9 bits (83), Expect(3) = 9e-024
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -1 / -1
Query: 387 LSCMPHTVILSSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFL 256
L +P + SS CLNG S V V V SPAA SFL KQ FL
Sbjct: 7101 LQILPDVLTHSSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FL 6970
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 102 bits (218), Expect(3) = 8e-041
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +3 / -2
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
QTDKGDEELCSVYVPTNHLYIGDIFLVNS EIIRPNLSIREGI
Sbjct: 12107075 QTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGI 12106947
Score = 72.1 bits (151), Expect(3) = 1e-025
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = -3 / +1
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV 131
+PSR+DK GLIIS+EFT+ MSP+ +* VGT*TLH+SSSPLSV
Sbjct: 12106948 IPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV 12107073
Score = 71.2 bits (149), Expect(3) = 8e-041
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +3 / -2
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
EIIVSGGMTMPQVI SLEPTPRKSQN+RL+R+ T
Sbjct: 12106754 EIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT 12106653
Score = 67.5 bits (141), Expect(3) = 8e-041
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +3 / -1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAII HPR+GEYAFGFITST+VLQ
Sbjct: 12107328 DQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQ 12107230
Score = 67.0 bits (140), Expect(3) = 1e-025
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -3 / +1
Query: 364 HTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIIS 257
H V+ L +R FWLF GVGS D ITCGIVIPPETIIS
Sbjct: 12106648 HYVIILFRRIFWLFLGVGSRDAITCGIVIPPETIIS 12106755
Score = 51.0 bits (105), Expect(3) = 1e-025
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = -3 / +2
Query: 130 *RTMVDVMNPNAYSPTRG*LMIATSLNAXXF 38
*RT VDV+NPNAYSP RG* +IATSL A F
Sbjct: 12107231 *RTTVDVINPNAYSPIRG*RIIATSLKAVVF 12107323
>dbj|AK059220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D01, full
insert sequence
Length = 1170
Score = 170 bits (365), Expect = 2e-040
Identities = 68/104 (65%), Positives = 83/104 (79%)
Frame = +3 / +2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + D N AFKEV II HPR+GEYAFGFITS++ LQ+ G EEL VYVPTNH
Sbjct: 590 SKQISAAISPDQNKQAFKEVVIIRHPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNH 769
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEP 314
LYIGDIF+VNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+P
Sbjct: 770 LYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDP 901
Score = 105 bits (223), Expect = 8e-021
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = -3 / -1
Query: 289 GIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVDV 110
GI +PP+T ISMPSR ++ GLI S EFT K+SPI + LVGT T ++SS P+ + R DV
Sbjct: 876 GIDMPPDTTISMPSRTERFGLITSFEFTMKISPI*RWLVGTYTQYSSS*PV*LWRETDDV 697
Query: 109 MNPNAYSPTRG*LMIATSLNAXXF 38
M PNAYSP RG LM+ TSLNA F
Sbjct: 696 MKPNAYSPIRGCLMMTTSLNACLF 625
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05,
complete sequence
Length = 109126
Score = 102 bits (217), Expect(3) = 3e-040
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = +3 / +3
Query: 120 MVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
+ LQTDKGDEELCSVYVPTNHLYIGDIFLV S EIIRPNLSIREGI
Sbjct: 55926 IALQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGI 56063
Score = 78.0 bits (164), Expect(3) = 2e-027
Identities = 33/48 (68%), Positives = 43/48 (89%)
Frame = -3 / -1
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
+PSR+DK GLIIS++ TKKMSPIY+*LVGT TLH+SSSPLSV + +++
Sbjct: 56062 IPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSVCKAILN 55919
Score = 71.2 bits (149), Expect(3) = 3e-040
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3 / +3
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAIISHPR+GEYAFGFITSTM+LQ
Sbjct: 55200 DQNTTAFKEVAIISHPRIGEYAFGFITSTMILQ 55298
Score = 67.5 bits (141), Expect(3) = 1e-022
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 257 YAFTNRQIGPYNFGGVYQKDVTNI*MIGWHINTTQFFITFVCL 129
Y F+N QI PYN Q+DVT+I*MIGWHI T QFFITFV L
Sbjct: 56063 YPFSNGQIRPYNLLRPNQEDVTDI*MIGWHIYTAQFFITFVSL 55935
Score = 66.1 bits (138), Expect(3) = 7e-022
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +1 / +1
Query: 112 HQPWFFRQTKVMKNCVVFMCQPIIYILVTSFW*TPPKL*GPICLFVKA* 258
H +R TKVMKNC V+MCQPIIYI VTS W +L*G IC F K *
Sbjct: 55918 HLILLYRLTKVMKNCAVYMCQPIIYISVTSSWLGLRRL*GRICPFEKG* 56064
Score = 62.0 bits (129), Expect(3) = 2e-027
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / -3
Query: 131 LKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
LK+H CYESKCIFTNTGMTN C FF+C I I
Sbjct: 55298 LKDHRRCYESKCIFTNTGMTNYCNFFKCRCILI 55200
Score = 57.0 bits (118), Expect(3) = 1e-022
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -3 / -1
Query: 136 SV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXF 38
+ *R +VDVMNPNAYSP RG*L+IATSLNA F
Sbjct: 55303 NT*RIIVDVMNPNAYSPIRG*LIIATSLNAVVF 55205
Score = 51.9 bits (107), Expect(3) = 3e-040
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3 / +2
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV*LYE 374
EIIVSGGMTMPQVI + TP K Q+ RL+R+ + *+++
Sbjct: 56192 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRMMSA*VHQ 56308
Score = 50.6 bits (104), Expect(3) = 7e-022
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2 / +1
Query: 254 HRNNCFRRNDYAAGDHVTGTNTSEEPERPFRQSEDSMTV*G 376
+RN+CF RND+AAGD T TNT E PF+Q+++ ++ G
Sbjct: 56188 YRNHCFWRNDHAAGDCSTRTNTP*GSEHPFKQNDECVSTSG 56310
Score = 46.4 bits (95), Expect(3) = 7e-022
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +1 / +1
Query: 31 QIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFR 132
QI H KK Q LVIPVLVNMHLDS*H+ FR
Sbjct: 55198 QIKIQRHLKKLQ*LVIPVLVNMHLDS*HRR*SFR 55299
Score = 42.3 bits (86), Expect(3) = 2e-027
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -3 / -2
Query: 367 SHTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPS 248
+H ++ L KR GV ITCG+VIPPET+IS+ S
Sbjct: 56301 THALIILFKRVL*PLWGVCPGAAITCGMVIPPETMISVKS 56182
Score = 40.9 bits (83), Expect(3) = 1e-022
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -1 / -3
Query: 387 LSCMPHTVILSSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFL 256
L +P + SS CLNG S V V V SPAA SFL KQ FL
Sbjct: 56321 LQILPDVLTHSSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FL 56190
>dbj|AK071119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M07, full
insert sequence
Length = 1309
Score = 165 bits (355), Expect = 5e-039
Identities = 68/116 (58%), Positives = 85/116 (73%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + D N AFKEV II HPR+GEYAFGFITS ++LQ +E++ VYVPTNH
Sbjct: 570 SKQISAAISPDQNKHAFKEVVIIRHPRIGEYAFGFITSEVLLQDYSSEEQMYCVYVPTNH 749
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDR 350
LYIGDIFLVNS+++IRPNLS+REGIEI+VSGGM+MPQV+ +E + +R R
Sbjct: 750 LYIGDIFLVNSSDVIRPNLSVREGIEIVVSGGMSMPQVLSIVETEQNQWSRMRSSR 917
>ref|NT_107212.1| Oryza sativa (japonica cultivar-group)
Length = 2712182
Score = 102 bits (217), Expect(3) = 2e-037
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = +3 / +1
Query: 120 MVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
+ LQTDKGDEELCSVYVPTNHLYIGDIFLV S EIIRPNLSIREGI
Sbjct: 2574685 IALQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGI 2574822
Score = 78.0 bits (164), Expect(3) = 8e-025
Identities = 33/48 (68%), Positives = 43/48 (89%)
Frame = -3 / -1
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
+PSR+DK GLIIS++ TKKMSPIY+*LVGT TLH+SSSPLSV + +++
Sbjct: 2574821 IPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSVCKAILN 2574678
Score = 71.2 bits (149), Expect(3) = 2e-037
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3 / +1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAIISHPR+GEYAFGFITSTM+LQ
Sbjct: 2573959 DQNTTAFKEVAIISHPRIGEYAFGFITSTMILQ 2574057
Score = 62.0 bits (129), Expect(3) = 8e-025
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / -3
Query: 131 LKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
LK+H CYESKCIFTNTGMTN C FF+C I I
Sbjct: 2574057 LKDHRRCYESKCIFTNTGMTNYCNFFKCRCILI 2573959
Score = 51.9 bits (107), Expect(3) = 2e-037
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3 / +3
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV*LYE 374
EIIVSGGMTMPQVI + TP K Q+ RL+R+ + *+++
Sbjct: 2574951 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRMMSA*VHQ 2575067
Score = 42.3 bits (86), Expect(3) = 8e-025
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -3 / -2
Query: 367 SHTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPS 248
+H ++ L KR GV ITCG+VIPPET+IS+ S
Sbjct: 2575060 THALIILFKRVL*PLWGVCPGAAITCGMVIPPETMISVKS 2574941
>gb|C99208.1|C99208 C99208 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10436_8Z, mRNA sequence
Length = 645
Score = 78.5 bits (165), Expect(5) = 1e-036
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3 / +3
Query: 159 SVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEI 263
SVYVPTNHLYIGDIFLV S EIIRPNLSIREGIEI
Sbjct: 189 SVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGIEI 293
Score = 72.1 bits (151), Expect(5) = 1e-036
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = +3 / +2
Query: 54 KEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELC 158
K++ + HPR+GEYAFGFITSTM+LQTDKGDEELC
Sbjct: 83 KKLQ*LVHPRIGEYAFGFITSTMILQTDKGDEELC 187
Score = 62.9 bits (131), Expect(4) = 2e-025
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = -3 / -3
Query: 262 ISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TL 158
IS+PSR+DK GLIIS++ TKKMSPIY+*LVGT TL
Sbjct: 292 ISIPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTL 188
Score = 59.3 bits (123), Expect(4) = 2e-025
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2 / -3
Query: 155 QFFITFVCLKNHG*CYESKCIFTNTGM 75
QFFITFV LK+H CYESKCIFTNTGM
Sbjct: 184 QFFITFVSLKDHRRCYESKCIFTNTGM 104
Score = 32.2 bits (64), Expect(5) = 1e-036
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 249 EGIEIIVSGGMTMPQVIMS 305
+G + IVSGGMTMPQVI S
Sbjct: 280 KG*KSIVSGGMTMPQVIAS 336
Score = 29.9 bits (59), Expect(4) = 2e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 298 ITCGIVIPPETIISMP 251
ITCG+VIPPET+ P
Sbjct: 329 ITCGMVIPPETMDFYP 282
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 305 TGTNTSEEPERPFRQSEDSMTV*GM 379
T TNT E PF+Q+++ ++ G+
Sbjct: 337 TRTNTP*GSEHPFKQNDECVSTSGL 411
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 39 NXXAFKEVAIIS 74
N AFKEVAIIS
Sbjct: 67 NTTAFKEVAIIS 102
Score = 22.6 bits (43), Expect(4) = 2e-025
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2 / -1
Query: 80 GMTNDCYFFECXXI 39
G TN C FF+C I
Sbjct: 108 GWTNYCNFFKCRCI 67
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 102 bits (217), Expect(3) = 3e-036
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = +3 / +3
Query: 120 MVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
+ LQTDKGDEELCSVYVPTNHLYIGDIFLV S EIIRPNLSIREGI
Sbjct: 3606600 IALQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGI 3606737
Score = 80.8 bits (170), Expect(3) = 1e-022
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +3 / -3
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
Q+ G EEL VYVPTNHLYIGDIF+VNS ++IRPNLS+REGI
Sbjct: 8459419 QSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGI 8459291
Score = 78.0 bits (164), Expect(3) = 1e-023
Identities = 33/48 (68%), Positives = 43/48 (89%)
Frame = -3 / -3
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
+PSR+DK GLIIS++ TKKMSPIY+*LVGT TLH+SSSPLSV + +++
Sbjct: 3606736 IPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSVCKAILN 3606593
Score = 71.2 bits (149), Expect(3) = 3e-036
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3 / +3
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAIISHPR+GEYAFGFITSTM+LQ
Sbjct: 3605874 DQNTTAFKEVAIISHPRIGEYAFGFITSTMILQ 3605972
Score = 62.0 bits (129), Expect(3) = 1e-023
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / -2
Query: 131 LKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
LK+H CYESKCIFTNTGMTN C FF+C I I
Sbjct: 3605972 LKDHRRCYESKCIFTNTGMTNYCNFFKCRCILI 3605874
Score = 61.6 bits (128), Expect(3) = 1e-022
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +3 / -2
Query: 18 TXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
T D N AFKEV II HPR+GEYAFGFITS++ LQ
Sbjct: 8459699 TLVSTDQNKQAFKEVVIIRHPRIGEYAFGFITSSVSLQ 8459586
Score = 51.9 bits (107), Expect(3) = 3e-036
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3 / +2
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV*LYE 374
EIIVSGGMTMPQVI + TP K Q+ RL+R+ + *+++
Sbjct: 3606866 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRMMSA*VHQ 3606982
Score = 42.3 bits (86), Expect(3) = 1e-023
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -3 / -1
Query: 367 SHTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPS 248
+H ++ L KR GV ITCG+VIPPET+IS+ S
Sbjct: 3606975 THALIILFKRVL*PLWGVCPGAAITCGMVIPPETMISVKS 3606856
Score = 36.8 bits (74), Expect(3) = 1e-022
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3 / -1
Query: 234 NLSIREGIEIIVSGGMTMPQVIMSLEP 314
+L + EI+VSGGM+MPQ++ +L+P
Sbjct: 8459202 DLFLTRHAEIVVSGGMSMPQILSTLDP 8459122
>gb|AU030027.1|AU030027 AU030027 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50520_1A, mRNA sequence
Length = 366
Score = 150 bits (323), Expect = 1e-034
Identities = 60/84 (71%), Positives = 72/84 (85%)
Frame = +3 / +3
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVN 212
D N AFKEV II HPR+GEYAFGFITS ++LQ +E++ VYVPTNHLYIGDIFLVN
Sbjct: 18 DQNKHAFKEVVIIRHPRIGEYAFGFITSEVLLQDYSSEEQMYCVYVPTNHLYIGDIFLVN 197
Query: 213 SAEIIRPNLSIREGIEIIVSGGMT 284
S+++IRPNLS+REGIEI+VSGGM+
Sbjct: 198 SSDVIRPNLSVREGIEIVVSGGMS 269
>gb|AU030028.1|AU030028 AU030028 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50520_2Z, mRNA sequence
Length = 707
Score = 135 bits (289), Expect(2) = 2e-033
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +3 / +3
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVN 212
D N AFKEVAII HPR+GEYAFGFITS ++LQ +E++ VYVPTNHLYIGDIFLVN
Sbjct: 78 DQNKHAFKEVAIIRHPRIGEYAFGFITSEVLLQDYSSEEQMYCVYVPTNHLYIGDIFLVN 257
Query: 213 SAEIIRPNLSIREGI 257
S+++IRPNLS+REGI
Sbjct: 258 SSDVIRPNLSVREGI 302
Score = 31.3 bits (62), Expect(2) = 2e-033
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3 / +1
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDR 350
EI+VSGG +MPQV+ +E + +R R
Sbjct: 304 EIVVSGGXSMPQVLSIVETEQNQWSRMRSSR 396
>gb|AU077950.1|AU077950 AU077950 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C12951_8Z, mRNA sequence
Length = 718
Score = 137 bits (293), Expect = 2e-030
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = +3 / +2
Query: 168 VPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLD 347
+PTNHLYIGDIFLVNS EIIRPNLSIREGIEIIVSGGMTMPQVI SLEPTPRKSQN+RL+
Sbjct: 95 MPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPTPRKSQNIRLN 274
Query: 348 RVRT 359
R+ T
Sbjct: 275 RIMT 286
Score = 111 bits (236), Expect = 1e-022
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = -3 / -2
Query: 364 HTVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIY 185
H V+ L +R FWLF GVGS D ITCGIVIPPETIIS+PSR+DK GLIIS+EFT+ MSP+
Sbjct: 291 HYVIILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSRMDKFGLIISSEFTRNMSPM* 112
Query: 184 K*LVG 170
+* VG
Sbjct: 111 R*FVG 97
>gb|AACV01012610.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012610, whole
genome shotgun sequence
Length = 16739
Score = 80.8 bits (170), Expect(3) = 4e-028
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +3 / -1
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
Q+ G EEL VYVPTNHLYIGDIF+VNS ++IRPNLS+REGI
Sbjct: 10868 QSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGI 10740
Score = 61.6 bits (128), Expect(3) = 4e-028
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +3 / -3
Query: 18 TXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
T D N AFKEV II HPR+GEYAFGFITS++ LQ
Sbjct: 11148 TLVSTDQNKQAFKEVVIIRHPRIGEYAFGFITSSVSLQ 11035
Score = 36.8 bits (74), Expect(3) = 4e-028
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3 / -2
Query: 234 NLSIREGIEIIVSGGMTMPQVIMSLEP 314
+L + EI+VSGGM+MPQ++ +L+P
Sbjct: 10651 DLFLTRHAEIVVSGGMSMPQILSTLDP 10571
>dbj|AK069386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H16, full
insert sequence
Length = 1192
Score = 90.4 bits (191), Expect(2) = 1e-027
Identities = 34/57 (59%), Positives = 49/57 (85%)
Frame = +3 / +1
Query: 141 GDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
G EL VYVPTN+LY+GDIFL++ A++I P+LS+RE IEI++SGGM++PQ+I ++E
Sbjct: 703 GGRELACVYVPTNNLYLGDIFLMSRADVIVPDLSVREAIEIVLSGGMSVPQIISAVE 873
Score = 57.0 bits (118), Expect(2) = 1e-027
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +3 / +1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D + AFKEV II HPR+GEYA GFITST+ L+
Sbjct: 562 DQSSRAFKEVVIIRHPRIGEYALGFITSTLTLR 660
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11,
complete sequence
Length = 133352
Score = 80.8 bits (170), Expect(3) = 2e-026
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +3 / -2
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
Q+ G EEL VYVPTNHLYIGDIF+VNS ++IRPNLS+REGI
Sbjct: 98140 QSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGI 98012
Score = 61.6 bits (128), Expect(3) = 2e-026
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +3 / -1
Query: 18 TXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
T D N AFKEV II HPR+GEYAFGFITS++ LQ
Sbjct: 98420 TLVSTDQNKQAFKEVVIIRHPRIGEYAFGFITSSVSLQ 98307
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3 / -3
Query: 234 NLSIREGIEIIVSGGMTMPQVIMSLEP 314
+L + EI+VSGGM+MPQ++ +L+P
Sbjct: 97923 DLFLTRHAEIVVSGGMSMPQILSTLDP 97843
>gb|AACV01003836.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003836, whole
genome shotgun sequence
Length = 32497
Score = 79.4 bits (167), Expect(3) = 4e-026
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +3 / +1
Query: 117 TMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
T + Q +E++ VYVPTNHLYIGDIFLVNS+++IRPNLS+REGI
Sbjct: 26140 TSLRQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPNLSVREGI 26280
Score = 60.6 bits (126), Expect(3) = 4e-026
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3 / +3
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEV II HPR+GEYAFGFITS ++LQ
Sbjct: 24546 DQNKHAFKEVVIIRHPRIGEYAFGFITSEVLLQ 24644
Score = 34.1 bits (68), Expect(3) = 4e-026
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3 / +2
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDR 350
EI+VSGGM+MPQV+ +E + +R R
Sbjct: 26372 EIVVSGGMSMPQVLSIVETEQNQWSRMRSSR 26464
>ref|NT_107218.1| Oryza sativa (japonica cultivar-group)
Length = 369997
Score = 80.8 bits (170), Expect(3) = 1e-025
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +3 / -1
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
Q+ G EEL VYVPTNHLYIGDIF+VNS ++IRPNLS+REGI
Sbjct: 98140 QSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGI 98012
Score = 61.6 bits (128), Expect(3) = 1e-025
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +3 / -3
Query: 18 TXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
T D N AFKEV II HPR+GEYAFGFITS++ LQ
Sbjct: 98420 TLVSTDQNKQAFKEVVIIRHPRIGEYAFGFITSSVSLQ 98307
Score = 36.8 bits (74), Expect(3) = 1e-025
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3 / -2
Query: 234 NLSIREGIEIIVSGGMTMPQVIMSLEP 314
+L + EI+VSGGM+MPQ++ +L+P
Sbjct: 97923 DLFLTRHAEIVVSGGMSMPQILSTLDP 97843
>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0693E08
Length = 157969
Score = 79.4 bits (167), Expect(3) = 9e-025
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +3 / -3
Query: 117 TMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
T + Q +E++ VYVPTNHLYIGDIFLVNS+++IRPNLS+REGI
Sbjct: 81890 TSLRQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPNLSVREGI 81750
Score = 60.6 bits (126), Expect(3) = 9e-025
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3 / -2
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEV II HPR+GEYAFGFITS ++LQ
Sbjct: 83484 DQNKHAFKEVVIIRHPRIGEYAFGFITSEVLLQ 83386
Score = 34.1 bits (68), Expect(3) = 9e-025
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3 / -1
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDR 350
EI+VSGGM+MPQV+ +E + +R R
Sbjct: 81658 EIVVSGGMSMPQVLSIVETEQNQWSRMRSSR 81566
>gb|CF323560.1|CF323560 HDN--04-C19.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-C19, mRNA sequence
Length = 512
Score = 106 bits (227), Expect(2) = 1e-024
Identities = 44/56 (78%), Positives = 46/56 (82%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYV 170
S V T D N AFKEVAIISHPR+GEYAFGFITSTM+LQTDKGDEELCSVYV
Sbjct: 297 SKQVSTAVSPDQNTTAFKEVAIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYV 464
Score = 30.4 bits (60), Expect(2) = 1e-024
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 174 TNHLYIGDIFL 206
TNHLYIGDIFL
Sbjct: 469 TNHLYIGDIFL 501
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 79.4 bits (167), Expect(3) = 1e-021
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +3 / -3
Query: 117 TMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
T + Q +E++ VYVPTNHLYIGDIFLVNS+++IRPNLS+REGI
Sbjct: 3648054 TSLRQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPNLSVREGI 3647914
Score = 60.6 bits (126), Expect(3) = 1e-021
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3 / -2
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEV II HPR+GEYAFGFITS ++LQ
Sbjct: 3649648 DQNKHAFKEVVIIRHPRIGEYAFGFITSEVLLQ 3649550
Score = 34.1 bits (68), Expect(3) = 1e-021
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3 / -1
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDR 350
EI+VSGGM+MPQV+ +E + +R R
Sbjct: 3647822 EIVVSGGMSMPQVLSIVETEQNQWSRMRSSR 3647730
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 79.4 bits (167), Expect(3) = 4e-021
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +3 / -3
Query: 117 TMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
T + Q +E++ VYVPTNHLYIGDIFLVNS+++IRPNLS+REGI
Sbjct: 9677720 TSLRQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPNLSVREGI 9677580
Score = 60.6 bits (126), Expect(3) = 4e-021
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3 / -2
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEV II HPR+GEYAFGFITS ++LQ
Sbjct: 9679314 DQNKHAFKEVVIIRHPRIGEYAFGFITSEVLLQ 9679216
Score = 34.1 bits (68), Expect(3) = 4e-021
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3 / -1
Query: 258 EIIVSGGMTMPQVIMSLEPTPRKSQNVRLDR 350
EI+VSGGM+MPQV+ +E + +R R
Sbjct: 9677488 EIVVSGGMSMPQVLSIVETEQNQWSRMRSSR 9677396
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,969,044,217
Number of Sequences: 438736
Number of extensions: 78647454
Number of successful extensions: 263251
Number of sequences better than 1.0e-020: 40
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 175164461033
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)