TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3510875.2.1
(707 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 177 5e-062
ref|NT_107141.1| Oryza sativa (japonica cultivar-group) 186 5e-062
gb|AC134044.4| Oryza sativa (japonica cultivar-group) chrom... 186 5e-062
gb|AACV01022467.1| Oryza sativa (japonica cultivar-group) c... 177 5e-062
dbj|AK062657.1| Oryza sativa (japonica cultivar-group) cDNA... 177 5e-062
gb|AACV01022471.1| Oryza sativa (japonica cultivar-group) c... 113 4e-047
gb|CA998180.1|CA998180 S345A_E11 Rice cold stress germinati... 186 3e-045
dbj|AK063148.1| Oryza sativa (japonica cultivar-group) cDNA... 186 3e-045
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 186 3e-045
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 186 3e-045
emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Parti... 182 4e-044
ref|NT_107157.1| Oryza sativa (japonica cultivar-group) 182 4e-044
gb|AACV01024067.1| Oryza sativa (japonica cultivar-group) c... 182 4e-044
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 182 4e-044
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 182 4e-044
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 182 4e-044
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 182 4e-044
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 177 2e-042
gb|AU075461.1|AU075461 AU075461 Rice cDNA from immature lea... 132 2e-037
gb|AACV01022472.1| Oryza sativa (japonica cultivar-group) c... 109 8e-025
dbj|AK060077.1| Oryza sativa (japonica cultivar-group) cDNA... 109 8e-025
gb|CF278089.1|CF278089 14ETL--03-N18.b1 Rice etiolated leaf... 109 8e-025
gb|CA756453.1|CA756453 BR030042000_PLATE_H05_40_046.ab1 OA ... 104 3e-023
gb|AACV01022469.1| Oryza sativa (japonica cultivar-group) c... 101 2e-022
gb|AZ128912.1|AZ128912 OSJNBb0064D04f CUGI Rice BAC Library... 101 2e-022
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 102 7e-022
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 102 7e-022
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 102 7e-022
dbj|AP006186.3| Oryza sativa (japonica cultivar-group) geno... 102 7e-022
gb|AACV01015027.1| Oryza sativa (japonica cultivar-group) c... 102 8e-022
dbj|AK109288.1| Oryza sativa (japonica cultivar-group) cDNA... 102 8e-022
dbj|AK106062.1| Oryza sativa (japonica cultivar-group) cDNA... 102 8e-022
dbj|AK119790.1| Oryza sativa (japonica cultivar-group) cDNA... 102 8e-022
ref|NM_186138.2| Oryza sativa (japonica cultivar-group), mRNA 102 8e-022
gb|CF278090.1|CF278090 14ETL--03-N18.g1 Rice etiolated leaf... 104 6e-021
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094 genomic
scaffold, whole genome shotgun sequence
Length = 4775249
Score = 177 bits (380), Expect(2) = 5e-062
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -2 / -1
Query: 550 AAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVG 371
AAG VGRAQGTYTFADQ+ GLLM MNFVFTAG+HNGS+L+I+GRNEV+S VREMS+VG
Sbjct: 3706052 AAGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVG 3705873
Query: 370 GSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA*L 257
GSGKFRMARGY +A T+DSG SG T+V+YT+ VKA*L
Sbjct: 3705872 GSGKFRMARGYAEARTVDSGFKSGETIVEYTLFVKA*L 3705759
Score = 123 bits (263), Expect = 2e-026
Identities = 59/114 (51%), Positives = 68/114 (59%)
Frame = +3 / +1
Query: 252 TGS*ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMES 431
+ S ALT VY T V P++ PES V A YP AMRNLP PPT LI P +
Sbjct: 3705754 SSSYALTKRVYSTMVSPDLKPESTVRASAYPLAMRNLPEPPTTLISLTGDITSFRPMIAR 3705933
Query: 432 VLPLCSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATT 593
+LPL SPAVNTKFM++RRP WSANV VP ARPT+ PAA + S T
Sbjct: 3705934 LLPLWSPAVNTKFMSIRRPITLWSANVYVPCARPTTSPAAAAAGELVSGSSMAT 3706095
Score = 113 bits (241), Expect(3) = 4e-047
Identities = 49/60 (81%), Positives = 55/60 (91%)
Frame = -2 / -1
Query: 439 GSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA* 260
GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V+YTV VKA*
Sbjct: 3754094 GSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFVKA* 3753915
Score = 109 bits (232), Expect(2) = 7e-025
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G +NGS +++
Sbjct: 3778789 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTV 3778968
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G +V+Y V V
Sbjct: 3778969 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYV 3779121
Score = 101 bits (215), Expect(2) = 1e-022
Identities = 42/89 (47%), Positives = 54/89 (60%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y +DQ G L MN V TAG +NGS +++LG N + +REM +VGG+ F
Sbjct: 3745330 VGRAQGMYLSSDQVRIGFLQAMNIVLTAGPYNGSVITVLGSNHISDSIREMPVVGGTSAF 3745509
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T + +V+Y V V
Sbjct: 3745510 RFARGYAQARTYFLDSNGLDAIVEYNVYV 3745596
Score = 85.4 bits (180), Expect(2) = 5e-062
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -2 / -1
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEV 533
G+T +VY+HDVVAG NPTA+R+AQ A FGAVVAIDDPLT+ P AA EV
Sbjct: 3706211 GMTKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPAAAAAGEV 3706038
Score = 79.0 bits (166), Expect(2) = 4e-029
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = -2 / -3
Query: 673 VVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQ 494
V G N T ++A+ FGAVV IDDPLT GP A VGRAQG Y A +
Sbjct: 3712365 VSGGPNSTVAQVAEAPTTNASATGFGAVVVIDDPLTDGPNLTASRLVGRAQGMYVAAGKD 3712186
Query: 493 TFGLLMVMNFVF 458
L+M MNFVF
Sbjct: 3712185 ALSLMMAMNFVF 3712150
Score = 77.6 bits (163), Expect(3) = 4e-047
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = -2 / -3
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTT 563
G+T +VYFHDVV GT PTA+R+AQ A FGAVVAIDDPLTT
Sbjct: 3754359 GMTKFKVYFHDVVGGTKPTAIRVAQAASTNGSSTFFGAVVAIDDPLTT 3754216
Score = 76.7 bits (161), Expect(3) = 5e-031
Identities = 33/48 (68%), Positives = 36/48 (75%)
Frame = +3 / +2
Query: 564 VVSGSSMATTAPKLVDDVLEDAXCAMRTAVGFVPATTSWKYTSEVVNP 707
VVSGSSMATTAPK V++ DA CA AVGFVP TTSWKYT +V P
Sbjct: 3754217 VVSGSSMATTAPKKVEEPFVDAACATLIAVGFVPPTTSWKYTLNLVIP 3754360
Score = 74.4 bits (156), Expect(3) = 5e-031
Identities = 36/60 (60%), Positives = 37/60 (61%)
Frame = +3 / +1
Query: 264 ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPL 443
ALT TVY T V PE+APES V A T P AMRNLP PPTMLI P M VLPL
Sbjct: 3753919 ALTKTVYSTMVSPELAPESTVRAST*PLAMRNLPEPPTMLISLTAESTSFRPTMARVLPL 3754098
Score = 73.0 bits (153), Expect(2) = 4e-029
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = -2 / -3
Query: 451 GEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVN 272
G +NGS+L+ILG N VREM +VGG+G FR ARGY QA T AT+G V+Y ++
Sbjct: 3712140 GPYNGSSLAILGANPAERAVREMPVVGGTGVFRFARGYCQATTWWFNATTGDATVEYNIH 3711961
Query: 271 VK 266
++
Sbjct: 3711960 LR 3711955
Score = 40.0 bits (81), Expect(3) = 4e-047
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 494 DVRPPHGHELRVHGRRAQ 441
DVRPPH HELRVH RR Q
Sbjct: 3754150 DVRPPHEHELRVHRRRPQ 3754097
Score = 28.6 bits (56), Expect(2) = 7e-025
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 685 YFHDVVAGTNPTAVRI 638
YFHD V+ +PTAVR+
Sbjct: 3778711 YFHDKVSKPSPTAVRV 3778758
Score = 28.6 bits (56), Expect(2) = 1e-022
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGP 557
FG V +DDPLT GP
Sbjct: 3745267 FGTVYVMDDPLTEGP 3745311
Score = 25.4 bits (49), Expect(3) = 5e-031
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 440 VVLAGREHEVHDH 478
+V+AG EHEVH H
Sbjct: 3754096 LVVAGGEHEVHVH 3754134
>ref|NT_107141.1| Oryza sativa (japonica cultivar-group)
Length = 1008063
Score = 186 bits (400), Expect = 3e-045
Identities = 82/123 (66%), Positives = 94/123 (76%)
Frame = -2 / -2
Query: 628 AXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAG 449
A F V D T ++ +EVGRAQG+YTFADQ+TFGLLM MNFVFTAG
Sbjct: 414971 AASTNGSSTFFGAVVAIDDPLTTDAASSSSEVGRAQGSYTFADQKTFGLLMNMNFVFTAG 414792
Query: 448 EHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
+H GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V+YTV V
Sbjct: 414791 DHKGSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFV 414612
Query: 268 KA* 260
KA*
Sbjct: 414611 KA* 414603
Score = 177 bits (380), Expect(2) = 5e-062
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -2 / -1
Query: 550 AAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVG 371
AAG VGRAQGTYTFADQ+ GLLM MNFVFTAG+HNGS+L+I+GRNEV+S VREMS+VG
Sbjct: 418068 AAGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVG 417889
Query: 370 GSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA*L 257
GSGKFRMARGY +A T+DSG SG T+V+YT+ VKA*L
Sbjct: 417888 GSGKFRMARGYAEARTVDSGFKSGETIVEYTLFVKA*L 417775
Score = 144 bits (308), Expect = 1e-032
Identities = 71/137 (51%), Positives = 79/137 (57%)
Frame = +3 / +1
Query: 264 ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPL 443
ALT TVY T V PE+APES V A T P AMRNLP PPTMLI P M VLPL
Sbjct: 414607 ALTKTVYSTMVSPELAPESTVRAST*PLAMRNLPEPPTMLISLTAESTSFRPTMARVLPL 414786
Query: 444 CSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLE 623
SPAVNTKFM MRRPNV WSANV*+PWARPTS V S T K+ + ++
Sbjct: 414787 WSPAVNTKFMFMRRPNVFWSANV*LPWARPTSDDDDAASVVSGSSMATTAPKKVEEPFVD 414966
Query: 624 DAXCAMRTAVGFVPATT 674
A + P T+
Sbjct: 414967 AACATLIAVGFVPPTTS 415017
Score = 123 bits (263), Expect = 2e-026
Identities = 59/114 (51%), Positives = 68/114 (59%)
Frame = +3 / +2
Query: 252 TGS*ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMES 431
+ S ALT VY T V P++ PES V A YP AMRNLP PPT LI P +
Sbjct: 417770 SSSYALTKRVYSTMVSPDLKPESTVRASAYPLAMRNLPEPPTTLISLTGDITSFRPMIAR 417949
Query: 432 VLPLCSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATT 593
+LPL SPAVNTKFM++RRP WSANV VP ARPT+ PAA + S T
Sbjct: 417950 LLPLWSPAVNTKFMSIRRPITLWSANVYVPCARPTTSPAAAAAGELVSGSSMAT 418111
Score = 109 bits (232), Expect(2) = 7e-025
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = -2 / +3
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G +NGS +++
Sbjct: 492627 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTV 492806
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G +V+Y V V
Sbjct: 492807 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYV 492959
Score = 101 bits (215), Expect(2) = 2e-022
Identities = 42/89 (47%), Positives = 54/89 (60%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y +DQ G L MN V TAG +NGS +++LG N + +REM +VGG+ F
Sbjct: 456947 VGRAQGMYLSSDQVRIGFLQAMNIVLTAGPYNGSVITVLGSNHISDSIREMPVVGGTSAF 457126
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T + +V+Y V V
Sbjct: 457127 RFARGYAQARTYFLDSNGLDAIVEYNVYV 457213
Score = 85.4 bits (180), Expect(2) = 5e-062
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -2 / -1
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEV 533
G+T +VY+HDVVAG NPTA+R+AQ A FGAVVAIDDPLT+ P AA EV
Sbjct: 418227 GMTKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPAAAAAGEV 418054
Score = 79.0 bits (166), Expect(2) = 5e-029
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = -2 / -3
Query: 673 VVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQ 494
V G N T ++A+ FGAVV IDDPLT GP A VGRAQG Y A +
Sbjct: 424381 VSGGPNSTVAQVAEAPTTNASATGFGAVVVIDDPLTDGPNLTASRLVGRAQGMYVAAGKD 424202
Query: 493 TFGLLMVMNFVF 458
L+M MNFVF
Sbjct: 424201 ALSLMMAMNFVF 424166
Score = 77.6 bits (163), Expect(2) = 3e-023
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = -2 / -2
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTT 563
G+T +VYFHDVV GT PTA+R+AQ A FGAVVAIDDPLTT
Sbjct: 415046 GMTKFKVYFHDVVGGTKPTAIRVAQAASTNGSSTFFGAVVAIDDPLTT 414903
Score = 73.0 bits (153), Expect(2) = 5e-029
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = -2 / -3
Query: 451 GEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVN 272
G +NGS+L+ILG N VREM +VGG+G FR ARGY QA T AT+G V+Y ++
Sbjct: 424156 GPYNGSSLAILGANPAERAVREMPVVGGTGVFRFARGYCQATTWWFNATTGDATVEYNIH 423977
Query: 271 VK 266
++
Sbjct: 423976 LR 423971
Score = 54.7 bits (113), Expect(2) = 3e-023
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -1 / -1
Query: 494 DVRPPHGHELRVHGRRAQRQHALHPWPQRGA 402
DVRPPH HELRVH RR Q +H H P+RGA
Sbjct: 414837 DVRPPHEHELRVHRRRPQGEHPRHRRPERGA 414745
Score = 28.6 bits (56), Expect(2) = 7e-025
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 685 YFHDVVAGTNPTAVRI 638
YFHD V+ +PTAVR+
Sbjct: 492549 YFHDKVSKPSPTAVRV 492596
Score = 28.6 bits (56), Expect(2) = 2e-022
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 601 FGAVVAIDDPLTTGP 557
FG V +DDPLT GP
Sbjct: 456884 FGTVYVMDDPLTEGP 456928
>gb|AC134044.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0019D06 map S10616A, complete sequence
Length = 182486
Score = 186 bits (400), Expect = 3e-045
Identities = 82/123 (66%), Positives = 94/123 (76%)
Frame = -2 / -1
Query: 628 AXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAG 449
A F V D T ++ +EVGRAQG+YTFADQ+TFGLLM MNFVFTAG
Sbjct: 25460 AASTNGSSTFFGAVVAIDDPLTTDAASSSSEVGRAQGSYTFADQKTFGLLMNMNFVFTAG 25281
Query: 448 EHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
+H GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V+YTV V
Sbjct: 25280 DHKGSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFV 25101
Query: 268 KA* 260
KA*
Sbjct: 25100 KA* 25092
Score = 177 bits (380), Expect(2) = 5e-062
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -2 / -3
Query: 550 AAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVG 371
AAG VGRAQGTYTFADQ+ GLLM MNFVFTAG+HNGS+L+I+GRNEV+S VREMS+VG
Sbjct: 28557 AAGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVG 28378
Query: 370 GSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA*L 257
GSGKFRMARGY +A T+DSG SG T+V+YT+ VKA*L
Sbjct: 28377 GSGKFRMARGYAEARTVDSGFKSGETIVEYTLFVKA*L 28264
Score = 144 bits (308), Expect = 1e-032
Identities = 71/137 (51%), Positives = 79/137 (57%)
Frame = +3 / +1
Query: 264 ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPL 443
ALT TVY T V PE+APES V A T P AMRNLP PPTMLI P M VLPL
Sbjct: 25096 ALTKTVYSTMVSPELAPESTVRAST*PLAMRNLPEPPTMLISLTAESTSFRPTMARVLPL 25275
Query: 444 CSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLE 623
SPAVNTKFM MRRPNV WSANV*+PWARPTS V S T K+ + ++
Sbjct: 25276 WSPAVNTKFMFMRRPNVFWSANV*LPWARPTSDDDDAASVVSGSSMATTAPKKVEEPFVD 25455
Query: 624 DAXCAMRTAVGFVPATT 674
A + P T+
Sbjct: 25456 AACATLIAVGFVPPTTS 25506
Score = 123 bits (263), Expect = 2e-026
Identities = 59/114 (51%), Positives = 68/114 (59%)
Frame = +3 / +2
Query: 252 TGS*ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMES 431
+ S ALT VY T V P++ PES V A YP AMRNLP PPT LI P +
Sbjct: 28259 SSSYALTKRVYSTMVSPDLKPESTVRASAYPLAMRNLPEPPTTLISLTGDITSFRPMIAR 28438
Query: 432 VLPLCSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATT 593
+LPL SPAVNTKFM++RRP WSANV VP ARPT+ PAA + S T
Sbjct: 28439 LLPLWSPAVNTKFMSIRRPITLWSANVYVPCARPTTSPAAAAAGELVSGSSMAT 28600
Score = 109 bits (232), Expect(2) = 8e-025
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = -2 / +3
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G +NGS +++
Sbjct: 103116 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTV 103295
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G +V+Y V V
Sbjct: 103296 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYV 103448
Score = 101 bits (215), Expect(2) = 2e-022
Identities = 42/89 (47%), Positives = 54/89 (60%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y +DQ G L MN V TAG +NGS +++LG N + +REM +VGG+ F
Sbjct: 67436 VGRAQGMYLSSDQVRIGFLQAMNIVLTAGPYNGSVITVLGSNHISDSIREMPVVGGTSAF 67615
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T + +V+Y V V
Sbjct: 67616 RFARGYAQARTYFLDSNGLDAIVEYNVYV 67702
Score = 85.4 bits (180), Expect(2) = 5e-062
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -2 / -3
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEV 533
G+T +VY+HDVVAG NPTA+R+AQ A FGAVVAIDDPLT+ P AA EV
Sbjct: 28716 GMTKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPAAAAAGEV 28543
Score = 79.0 bits (166), Expect(2) = 5e-029
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = -2 / -2
Query: 673 VVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQ 494
V G N T ++A+ FGAVV IDDPLT GP A VGRAQG Y A +
Sbjct: 34870 VSGGPNSTVAQVAEAPTTNASATGFGAVVVIDDPLTDGPNLTASRLVGRAQGMYVAAGKD 34691
Query: 493 TFGLLMVMNFVF 458
L+M MNFVF
Sbjct: 34690 ALSLMMAMNFVF 34655
Score = 77.6 bits (163), Expect(2) = 3e-023
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = -2 / -1
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTT 563
G+T +VYFHDVV GT PTA+R+AQ A FGAVVAIDDPLTT
Sbjct: 25535 GMTKFKVYFHDVVGGTKPTAIRVAQAASTNGSSTFFGAVVAIDDPLTT 25392
Score = 73.0 bits (153), Expect(2) = 5e-029
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = -2 / -2
Query: 451 GEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVN 272
G +NGS+L+ILG N VREM +VGG+G FR ARGY QA T AT+G V+Y ++
Sbjct: 34645 GPYNGSSLAILGANPAERAVREMPVVGGTGVFRFARGYCQATTWWFNATTGDATVEYNIH 34466
Query: 271 VK 266
++
Sbjct: 34465 LR 34460
Score = 54.7 bits (113), Expect(2) = 3e-023
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -1 / -3
Query: 494 DVRPPHGHELRVHGRRAQRQHALHPWPQRGA 402
DVRPPH HELRVH RR Q +H H P+RGA
Sbjct: 25326 DVRPPHEHELRVHRRRPQGEHPRHRRPERGA 25234
Score = 28.6 bits (56), Expect(2) = 8e-025
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 685 YFHDVVAGTNPTAVRI 638
YFHD V+ +PTAVR+
Sbjct: 103038 YFHDKVSKPSPTAVRV 103085
Score = 28.6 bits (56), Expect(2) = 2e-022
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 601 FGAVVAIDDPLTTGP 557
FG V +DDPLT GP
Sbjct: 67373 FGTVYVMDDPLTEGP 67417
>gb|AACV01022467.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022467, whole
genome shotgun sequence
Length = 40248
Score = 177 bits (380), Expect(2) = 5e-062
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -2 / +1
Query: 550 AAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVG 371
AAG VGRAQGTYTFADQ+ GLLM MNFVFTAG+HNGS+L+I+GRNEV+S VREMS+VG
Sbjct: 20065 AAGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVG 20244
Query: 370 GSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA*L 257
GSGKFRMARGY +A T+DSG SG T+V+YT+ VKA*L
Sbjct: 20245 GSGKFRMARGYAEARTVDSGFKSGETIVEYTLFVKA*L 20358
Score = 123 bits (263), Expect = 2e-026
Identities = 59/114 (51%), Positives = 68/114 (59%)
Frame = +3 / -2
Query: 252 TGS*ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMES 431
+ S ALT VY T V P++ PES V A YP AMRNLP PPT LI P +
Sbjct: 20363 SSSYALTKRVYSTMVSPDLKPESTVRASAYPLAMRNLPEPPTTLISLTGDITSFRPMIAR 20184
Query: 432 VLPLCSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATT 593
+LPL SPAVNTKFM++RRP WSANV VP ARPT+ PAA + S T
Sbjct: 20183 LLPLWSPAVNTKFMSIRRPITLWSANVYVPCARPTTSPAAAAAGELVSGSSMAT 20022
Score = 85.4 bits (180), Expect(2) = 5e-062
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -2 / +1
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEV 533
G+T +VY+HDVVAG NPTA+R+AQ A FGAVVAIDDPLT+ P AA EV
Sbjct: 19906 GMTKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPAAAAAGEV 20079
Score = 79.0 bits (166), Expect(2) = 5e-029
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = -2 / +3
Query: 673 VVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQ 494
V G N T ++A+ FGAVV IDDPLT GP A VGRAQG Y A +
Sbjct: 13752 VSGGPNSTVAQVAEAPTTNASATGFGAVVVIDDPLTDGPNLTASRLVGRAQGMYVAAGKD 13931
Query: 493 TFGLLMVMNFVF 458
L+M MNFVF
Sbjct: 13932 ALSLMMAMNFVF 13967
Score = 73.0 bits (153), Expect(2) = 5e-029
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = -2 / +3
Query: 451 GEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVN 272
G +NGS+L+ILG N VREM +VGG+G FR ARGY QA T AT+G V+Y ++
Sbjct: 13977 GPYNGSSLAILGANPAERAVREMPVVGGTGVFRFARGYCQATTWWFNATTGDATVEYNIH 14156
Query: 271 VK 266
++
Sbjct: 14157 LR 14162
>dbj|AK062657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-F01, full
insert sequence
Length = 712
Score = 177 bits (380), Expect(2) = 5e-062
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -2 / +3
Query: 550 AAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVG 371
AAG VGRAQGTYTFADQ+ GLLM MNFVFTAG+HNGS+L+I+GRNEV+S VREMS+VG
Sbjct: 294 AAGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVG 473
Query: 370 GSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA*L 257
GSGKFRMARGY +A T+DSG SG T+V+YT+ VKA*L
Sbjct: 474 GSGKFRMARGYAEARTVDSGFKSGETIVEYTLFVKA*L 587
Score = 123 bits (263), Expect = 2e-026
Identities = 59/114 (51%), Positives = 68/114 (59%)
Frame = +3 / -1
Query: 252 TGS*ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMES 431
+ S ALT VY T V P++ PES V A YP AMRNLP PPT LI P +
Sbjct: 592 SSSYALTKRVYSTMVSPDLKPESTVRASAYPLAMRNLPEPPTTLISLTGDITSFRPMIAR 413
Query: 432 VLPLCSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATT 593
+LPL SPAVNTKFM++RRP WSANV VP ARPT+ PAA + S T
Sbjct: 412 LLPLWSPAVNTKFMSIRRPITLWSANVYVPCARPTTSPAAAAAGELVSGSSMAT 251
Score = 85.4 bits (180), Expect(2) = 5e-062
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -2 / +3
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEV 533
G+T +VY+HDVVAG NPTA+R+AQ A FGAVVAIDDPLT+ P AA EV
Sbjct: 135 GMTKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPAAAAAGEV 308
>gb|AACV01022471.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022471,
whole genome shotgun sequence
Length = 1146
Score = 113 bits (241), Expect(3) = 4e-047
Identities = 49/60 (81%), Positives = 55/60 (91%)
Frame = -2 / +1
Query: 439 GSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA* 260
GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V+YTV VKA*
Sbjct: 364 GSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFVKA* 543
Score = 77.6 bits (163), Expect(3) = 4e-047
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = -2 / +3
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTT 563
G+T +VYFHDVV GT PTA+R+AQ A FGAVVAIDDPLTT
Sbjct: 99 GMTKFKVYFHDVVGGTKPTAIRVAQAASTNGSSTFFGAVVAIDDPLTT 242
Score = 76.7 bits (161), Expect(3) = 6e-031
Identities = 33/48 (68%), Positives = 36/48 (75%)
Frame = +3 / -3
Query: 564 VVSGSSMATTAPKLVDDVLEDAXCAMRTAVGFVPATTSWKYTSEVVNP 707
VVSGSSMATTAPK V++ DA CA AVGFVP TTSWKYT +V P
Sbjct: 241 VVSGSSMATTAPKKVEEPFVDAACATLIAVGFVPPTTSWKYTLNLVIP 98
Score = 74.4 bits (156), Expect(3) = 6e-031
Identities = 36/60 (60%), Positives = 37/60 (61%)
Frame = +3 / -2
Query: 264 ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPL 443
ALT TVY T V PE+APES V A T P AMRNLP PPTMLI P M VLPL
Sbjct: 539 ALTKTVYSTMVSPELAPESTVRAST*PLAMRNLPEPPTMLISLTAESTSFRPTMARVLPL 360
Score = 40.0 bits (81), Expect(3) = 4e-047
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 494 DVRPPHGHELRVHGRRAQ 441
DVRPPH HELRVH RR Q
Sbjct: 308 DVRPPHEHELRVHRRRPQ 361
Score = 25.4 bits (49), Expect(3) = 6e-031
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 440 VVLAGREHEVHDH 478
+V+AG EHEVH H
Sbjct: 362 LVVAGGEHEVHVH 324
>gb|CA998180.1|CA998180 S345A_E11 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 665
Score = 186 bits (400), Expect = 3e-045
Identities = 82/123 (66%), Positives = 94/123 (76%)
Frame = -2 / +1
Query: 628 AXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAG 449
A F V D T ++ +EVGRAQG+YTFADQ+TFGLLM MNFVFTAG
Sbjct: 64 AASTNGSSTFFGAVVAIDDPLTTDAASSSSEVGRAQGSYTFADQKTFGLLMNMNFVFTAG 243
Query: 448 EHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
+H GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V+YTV V
Sbjct: 244 DHKGSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFV 423
Query: 268 KA* 260
KA*
Sbjct: 424 KA* 432
Score = 144 bits (308), Expect = 1e-032
Identities = 71/137 (51%), Positives = 79/137 (57%)
Frame = +3 / -1
Query: 264 ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPL 443
ALT TVY T V PE+APES V A T P AMRNLP PPTMLI P M VLPL
Sbjct: 428 ALTKTVYSTMVSPELAPESTVRAST*PLAMRNLPEPPTMLISLTAESTSFRPTMARVLPL 249
Query: 444 CSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLE 623
SPAVNTKFM MRRPNV WSANV*+PWARPTS V S T K+ + ++
Sbjct: 248 WSPAVNTKFMFMRRPNVFWSANV*LPWARPTSDDDDAASVVSGSSMATTAPKKVEEPFVD 69
Query: 624 DAXCAMRTAVGFVPATT 674
A + P T+
Sbjct: 68 AACATLIAVGFVPPTTS 18
Score = 73.0 bits (153), Expect(2) = 8e-022
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -2 / +1
Query: 691 EVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTT 563
+VYFHDVV GT PTA+R+AQ A FGAVVAIDDPLTT
Sbjct: 4 KVYFHDVVGGTKPTAIRVAQAASTNGSSTFFGAVVAIDDPLTT 132
Score = 54.7 bits (113), Expect(2) = 8e-022
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -1 / +3
Query: 494 DVRPPHGHELRVHGRRAQRQHALHPWPQRGA 402
DVRPPH HELRVH RR Q +H H P+RGA
Sbjct: 198 DVRPPHEHELRVHRRRPQGEHPRHRRPERGA 290
>dbj|AK063148.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-H04, full
insert sequence
Length = 756
Score = 186 bits (400), Expect = 3e-045
Identities = 82/123 (66%), Positives = 94/123 (76%)
Frame = -2 / +2
Query: 628 AXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAG 449
A F V D T ++ +EVGRAQG+YTFADQ+TFGLLM MNFVFTAG
Sbjct: 200 AASTNGSSTFFGAVVAIDDPLTTDAASSSSEVGRAQGSYTFADQKTFGLLMNMNFVFTAG 379
Query: 448 EHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
+H GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V+YTV V
Sbjct: 380 DHKGSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFV 559
Query: 268 KA* 260
KA*
Sbjct: 560 KA* 568
Score = 144 bits (308), Expect = 1e-032
Identities = 71/137 (51%), Positives = 79/137 (57%)
Frame = +3 / -1
Query: 264 ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPL 443
ALT TVY T V PE+APES V A T P AMRNLP PPTMLI P M VLPL
Sbjct: 564 ALTKTVYSTMVSPELAPESTVRAST*PLAMRNLPEPPTMLISLTAESTSFRPTMARVLPL 385
Query: 444 CSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLE 623
SPAVNTKFM MRRPNV WSANV*+PWARPTS V S T K+ + ++
Sbjct: 384 WSPAVNTKFMFMRRPNVFWSANV*LPWARPTSDDDDAASVVSGSSMATTAPKKVEEPFVD 205
Query: 624 DAXCAMRTAVGFVPATT 674
A + P T+
Sbjct: 204 AACATLIAVGFVPPTTS 154
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = -2 / +2
Query: 706 GLTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTT 563
G+T +VYFHDVV GT PTA+R+AQ A FGAVVAIDDPLTT
Sbjct: 125 GMTKFKVYFHDVVGGTKPTAIRVAQAASTNGSSTFFGAVVAIDDPLTT 268
Score = 54.7 bits (113), Expect(2) = 4e-023
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -1 / +1
Query: 494 DVRPPHGHELRVHGRRAQRQHALHPWPQRGA 402
DVRPPH HELRVH RR Q +H H P+RGA
Sbjct: 334 DVRPPHEHELRVHRRRPQGEHPRHRRPERGA 426
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 186 bits (400), Expect = 3e-045
Identities = 82/123 (66%), Positives = 94/123 (76%)
Frame = -2 / -1
Query: 628 AXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAG 449
A F V D T ++ +EVGRAQG+YTFADQ+TFGLLM MNFVFTAG
Sbjct: 3897834 AASTNGSSTFFGAVVAIDDPLTTDAASSSSEVGRAQGSYTFADQKTFGLLMNMNFVFTAG 3897655
Query: 448 EHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
+H GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V+YTV V
Sbjct: 3897654 DHKGSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFV 3897475
Query: 268 KA* 260
KA*
Sbjct: 3897474 KA* 3897466
Score = 177 bits (380), Expect = 2e-042
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -2 / -3
Query: 550 AAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVG 371
AAG VGRAQGTYTFADQ+ GLLM MNFVFTAG+HNGS+L+I+GRNEV+S VREMS+VG
Sbjct: 3900931 AAGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVG 3900752
Query: 370 GSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA*L 257
GSGKFRMARGY +A T+DSG SG T+V+YT+ VKA*L
Sbjct: 3900751 GSGKFRMARGYAEARTVDSGFKSGETIVEYTLFVKA*L 3900638
Score = 144 bits (308), Expect = 1e-032
Identities = 71/137 (51%), Positives = 79/137 (57%)
Frame = +3 / +2
Query: 264 ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPL 443
ALT TVY T V PE+APES V A T P AMRNLP PPTMLI P M VLPL
Sbjct: 3897470 ALTKTVYSTMVSPELAPESTVRAST*PLAMRNLPEPPTMLISLTAESTSFRPTMARVLPL 3897649
Query: 444 CSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLE 623
SPAVNTKFM MRRPNV WSANV*+PWARPTS V S T K+ + ++
Sbjct: 3897650 WSPAVNTKFMFMRRPNVFWSANV*LPWARPTSDDDDAASVVSGSSMATTAPKKVEEPFVD 3897829
Query: 624 DAXCAMRTAVGFVPATT 674
A + P T+
Sbjct: 3897830 AACATLIAVGFVPPTTS 3897880
Score = 123 bits (263), Expect = 2e-026
Identities = 59/114 (51%), Positives = 68/114 (59%)
Frame = +3 / +3
Query: 252 TGS*ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMES 431
+ S ALT VY T V P++ PES V A YP AMRNLP PPT LI P +
Sbjct: 3900633 SSSYALTKRVYSTMVSPDLKPESTVRASAYPLAMRNLPEPPTTLISLTGDITSFRPMIAR 3900812
Query: 432 VLPLCSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATT 593
+LPL SPAVNTKFM++RRP WSANV VP ARPT+ PAA + S T
Sbjct: 3900813 LLPLWSPAVNTKFMSIRRPITLWSANVYVPCARPTTSPAAAAAGELVSGSSMAT 3900974
Score = 109 bits (232), Expect = 4e-022
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G +NGS +++
Sbjct: 3975490 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTV 3975669
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G +V+Y V V
Sbjct: 3975670 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYV 3975822
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 186 bits (400), Expect = 3e-045
Identities = 82/123 (66%), Positives = 94/123 (76%)
Frame = -2 / -3
Query: 628 AXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAG 449
A F V D T ++ +EVGRAQG+YTFADQ+TFGLLM MNFVFTAG
Sbjct: 3906528 AASTNGSSTFFGAVVAIDDPLTTDAASSSSEVGRAQGSYTFADQKTFGLLMNMNFVFTAG 3906349
Query: 448 EHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
+H GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V+YTV V
Sbjct: 3906348 DHKGSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFV 3906169
Query: 268 KA* 260
KA*
Sbjct: 3906168 KA* 3906160
Score = 177 bits (380), Expect = 2e-042
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -2 / -2
Query: 550 AAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVG 371
AAG VGRAQGTYTFADQ+ GLLM MNFVFTAG+HNGS+L+I+GRNEV+S VREMS+VG
Sbjct: 3909625 AAGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVG 3909446
Query: 370 GSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA*L 257
GSGKFRMARGY +A T+DSG SG T+V+YT+ VKA*L
Sbjct: 3909445 GSGKFRMARGYAEARTVDSGFKSGETIVEYTLFVKA*L 3909332
Score = 144 bits (308), Expect = 1e-032
Identities = 71/137 (51%), Positives = 79/137 (57%)
Frame = +3 / +2
Query: 264 ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPL 443
ALT TVY T V PE+APES V A T P AMRNLP PPTMLI P M VLPL
Sbjct: 3906164 ALTKTVYSTMVSPELAPESTVRAST*PLAMRNLPEPPTMLISLTAESTSFRPTMARVLPL 3906343
Query: 444 CSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLE 623
SPAVNTKFM MRRPNV WSANV*+PWARPTS V S T K+ + ++
Sbjct: 3906344 WSPAVNTKFMFMRRPNVFWSANV*LPWARPTSDDDDAASVVSGSSMATTAPKKVEEPFVD 3906523
Query: 624 DAXCAMRTAVGFVPATT 674
A + P T+
Sbjct: 3906524 AACATLIAVGFVPPTTS 3906574
Score = 123 bits (263), Expect = 2e-026
Identities = 59/114 (51%), Positives = 68/114 (59%)
Frame = +3 / +3
Query: 252 TGS*ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMES 431
+ S ALT VY T V P++ PES V A YP AMRNLP PPT LI P +
Sbjct: 3909327 SSSYALTKRVYSTMVSPDLKPESTVRASAYPLAMRNLPEPPTTLISLTGDITSFRPMIAR 3909506
Query: 432 VLPLCSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATT 593
+LPL SPAVNTKFM++RRP WSANV VP ARPT+ PAA + S T
Sbjct: 3909507 LLPLWSPAVNTKFMSIRRPITLWSANVYVPCARPTTSPAAAAAGELVSGSSMAT 3909668
Score = 109 bits (232), Expect = 4e-022
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G +NGS +++
Sbjct: 3984184 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTV 3984363
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G +V+Y V V
Sbjct: 3984364 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYV 3984516
>emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0010K22
of library OSJNBa from chromosome 12 of cultivar
Nipponbare of ssp. japonica of Oryza sativa (rice),
complete sequence
Length = 92728
Score = 182 bits (392), Expect = 4e-044
Identities = 77/144 (53%), Positives = 100/144 (69%)
Frame = -2 / -1
Query: 700 TTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQ 521
T +VY+HDVV+G +PTAV++A+ A FGAVV IDDPLT+GP A + VGRAQ
Sbjct: 51010 THIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQ 50831
Query: 520 GTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARG 341
GTY A + T LLM MNFVF +G +NGST++I+GRNEV + VREM++VGG+G FR ARG
Sbjct: 50830 GTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARG 50651
Query: 340 YVQAHTIDSGATSGTTVVQYTVNV 269
Y QA T +G V+Y + +
Sbjct: 50650 YAQARTHTLDMKTGDATVEYNLYI 50579
Score = 118 bits (253), Expect = 5e-025
Identities = 64/137 (46%), Positives = 70/137 (51%)
Frame = +3 / +3
Query: 279 VYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPLCSPAV 458
+Y T P V A PRA R P+PPT I P M +VLPL P
Sbjct: 50589 LYSTVASPVFMSRVWVRAWA*PRAHRKTPVPPTTAISRTAAKTSLRPMMATVLPLYLPDW 50768
Query: 459 NTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLEDAXCA 638
TKFM M V A *VPWARPT A R GP VSGSS+ TTAPK + D L A A
Sbjct: 50769 KTKFMFMSSATVSLPALT*VPWARPTGDEAFRSGPDVSGSSITTTAPKKLADELVVAALA 50948
Query: 639 MRTAVGFVPATTSWKYT 689
TAVG P TTS +YT
Sbjct: 50949 TCTAVGLGPLTTSCQYT 50999
>ref|NT_107157.1| Oryza sativa (japonica cultivar-group)
Length = 959526
Score = 182 bits (392), Expect = 4e-044
Identities = 77/144 (53%), Positives = 100/144 (69%)
Frame = -2 / +3
Query: 700 TTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQ 521
T +VY+HDVV+G +PTAV++A+ A FGAVV IDDPLT+GP A + VGRAQ
Sbjct: 143784 THIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQ 143963
Query: 520 GTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARG 341
GTY A + T LLM MNFVF +G +NGST++I+GRNEV + VREM++VGG+G FR ARG
Sbjct: 143964 GTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARG 144143
Query: 340 YVQAHTIDSGATSGTTVVQYTVNV 269
Y QA T +G V+Y + +
Sbjct: 144144 YAQARTHTLDMKTGDATVEYNLYI 144215
Score = 118 bits (253), Expect = 5e-025
Identities = 64/137 (46%), Positives = 70/137 (51%)
Frame = +3 / -3
Query: 279 VYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPLCSPAV 458
+Y T P V A PRA R P+PPT I P M +VLPL P
Sbjct: 144205 LYSTVASPVFMSRVWVRAWA*PRAHRKTPVPPTTAISRTAAKTSLRPMMATVLPLYLPDW 144026
Query: 459 NTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLEDAXCA 638
TKFM M V A *VPWARPT A R GP VSGSS+ TTAPK + D L A A
Sbjct: 144025 KTKFMFMSSATVSLPALT*VPWARPTGDEAFRSGPDVSGSSITTTAPKKLADELVVAALA 143846
Query: 639 MRTAVGFVPATTSWKYT 689
TAVG P TTS +YT
Sbjct: 143845 TCTAVGLGPLTTSCQYT 143795
>gb|AACV01024067.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg024067, whole
genome shotgun sequence
Length = 28316
Score = 182 bits (392), Expect = 4e-044
Identities = 77/144 (53%), Positives = 100/144 (69%)
Frame = -2 / -3
Query: 700 TTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQ 521
T +VY+HDVV+G +PTAV++A+ A FGAVV IDDPLT+GP A + VGRAQ
Sbjct: 24591 THIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQ 24412
Query: 520 GTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARG 341
GTY A + T LLM MNFVF +G +NGST++I+GRNEV + VREM++VGG+G FR ARG
Sbjct: 24411 GTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARG 24232
Query: 340 YVQAHTIDSGATSGTTVVQYTVNV 269
Y QA T +G V+Y + +
Sbjct: 24231 YAQARTHTLDMKTGDATVEYNLYI 24160
Score = 118 bits (253), Expect = 5e-025
Identities = 64/137 (46%), Positives = 70/137 (51%)
Frame = +3 / +2
Query: 279 VYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPLCSPAV 458
+Y T P V A PRA R P+PPT I P M +VLPL P
Sbjct: 24170 LYSTVASPVFMSRVWVRAWA*PRAHRKTPVPPTTAISRTAAKTSLRPMMATVLPLYLPDW 24349
Query: 459 NTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLEDAXCA 638
TKFM M V A *VPWARPT A R GP VSGSS+ TTAPK + D L A A
Sbjct: 24350 KTKFMFMSSATVSLPALT*VPWARPTGDEAFRSGPDVSGSSITTTAPKKLADELVVAALA 24529
Query: 639 MRTAVGFVPATTSWKYT 689
TAVG P TTS +YT
Sbjct: 24530 TCTAVGLGPLTTSCQYT 24580
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 182 bits (392), Expect = 4e-044
Identities = 77/144 (53%), Positives = 100/144 (69%)
Frame = -2 / +3
Query: 700 TTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQ 521
T +VY+HDVV+G +PTAV++A+ A FGAVV IDDPLT+GP A + VGRAQ
Sbjct: 3657861 THIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQ 3658040
Query: 520 GTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARG 341
GTY A + T LLM MNFVF +G +NGST++I+GRNEV + VREM++VGG+G FR ARG
Sbjct: 3658041 GTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARG 3658220
Query: 340 YVQAHTIDSGATSGTTVVQYTVNV 269
Y QA T +G V+Y + +
Sbjct: 3658221 YAQARTHTLDMKTGDATVEYNLYI 3658292
Score = 118 bits (253), Expect = 5e-025
Identities = 64/137 (46%), Positives = 70/137 (51%)
Frame = +3 / -3
Query: 279 VYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPLCSPAV 458
+Y T P V A PRA R P+PPT I P M +VLPL P
Sbjct: 3658282 LYSTVASPVFMSRVWVRAWA*PRAHRKTPVPPTTAISRTAAKTSLRPMMATVLPLYLPDW 3658103
Query: 459 NTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLEDAXCA 638
TKFM M V A *VPWARPT A R GP VSGSS+ TTAPK + D L A A
Sbjct: 3658102 KTKFMFMSSATVSLPALT*VPWARPTGDEAFRSGPDVSGSSITTTAPKKLADELVVAALA 3657923
Query: 639 MRTAVGFVPATTSWKYT 689
TAVG P TTS +YT
Sbjct: 3657922 TCTAVGLGPLTTSCQYT 3657872
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 182 bits (392), Expect = 4e-044
Identities = 77/144 (53%), Positives = 100/144 (69%)
Frame = -2 / +3
Query: 700 TTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQ 521
T +VY+HDVV+G +PTAV++A+ A FGAVV IDDPLT+GP A + VGRAQ
Sbjct: 3657861 THIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQ 3658040
Query: 520 GTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARG 341
GTY A + T LLM MNFVF +G +NGST++I+GRNEV + VREM++VGG+G FR ARG
Sbjct: 3658041 GTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARG 3658220
Query: 340 YVQAHTIDSGATSGTTVVQYTVNV 269
Y QA T +G V+Y + +
Sbjct: 3658221 YAQARTHTLDMKTGDATVEYNLYI 3658292
Score = 118 bits (253), Expect = 5e-025
Identities = 64/137 (46%), Positives = 70/137 (51%)
Frame = +3 / -3
Query: 279 VYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPLCSPAV 458
+Y T P V A PRA R P+PPT I P M +VLPL P
Sbjct: 3658282 LYSTVASPVFMSRVWVRAWA*PRAHRKTPVPPTTAISRTAAKTSLRPMMATVLPLYLPDW 3658103
Query: 459 NTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLEDAXCA 638
TKFM M V A *VPWARPT A R GP VSGSS+ TTAPK + D L A A
Sbjct: 3658102 KTKFMFMSSATVSLPALT*VPWARPTGDEAFRSGPDVSGSSITTTAPKKLADELVVAALA 3657923
Query: 639 MRTAVGFVPATTSWKYT 689
TAVG P TTS +YT
Sbjct: 3657922 TCTAVGLGPLTTSCQYT 3657872
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 182 bits (392), Expect = 4e-044
Identities = 77/144 (53%), Positives = 100/144 (69%)
Frame = -2 / +2
Query: 700 TTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQ 521
T +VY+HDVV+G +PTAV++A+ A FGAVV IDDPLT+GP A + VGRAQ
Sbjct: 3789035 THIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQ 3789214
Query: 520 GTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARG 341
GTY A + T LLM MNFVF +G +NGST++I+GRNEV + VREM++VGG+G FR ARG
Sbjct: 3789215 GTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARG 3789394
Query: 340 YVQAHTIDSGATSGTTVVQYTVNV 269
Y QA T +G V+Y + +
Sbjct: 3789395 YAQARTHTLDMKTGDATVEYNLYI 3789466
Score = 118 bits (253), Expect = 5e-025
Identities = 64/137 (46%), Positives = 70/137 (51%)
Frame = +3 / -3
Query: 279 VYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPLCSPAV 458
+Y T P V A PRA R P+PPT I P M +VLPL P
Sbjct: 3789456 LYSTVASPVFMSRVWVRAWA*PRAHRKTPVPPTTAISRTAAKTSLRPMMATVLPLYLPDW 3789277
Query: 459 NTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLEDAXCA 638
TKFM M V A *VPWARPT A R GP VSGSS+ TTAPK + D L A A
Sbjct: 3789276 KTKFMFMSSATVSLPALT*VPWARPTGDEAFRSGPDVSGSSITTTAPKKLADELVVAALA 3789097
Query: 639 MRTAVGFVPATTSWKYT 689
TAVG P TTS +YT
Sbjct: 3789096 TCTAVGLGPLTTSCQYT 3789046
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 182 bits (392), Expect = 4e-044
Identities = 77/144 (53%), Positives = 100/144 (69%)
Frame = -2 / +3
Query: 700 TTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGPTRAAGTEVGRAQ 521
T +VY+HDVV+G +PTAV++A+ A FGAVV IDDPLT+GP A + VGRAQ
Sbjct: 3789009 THIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQ 3789188
Query: 520 GTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARG 341
GTY A + T LLM MNFVF +G +NGST++I+GRNEV + VREM++VGG+G FR ARG
Sbjct: 3789189 GTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARG 3789368
Query: 340 YVQAHTIDSGATSGTTVVQYTVNV 269
Y QA T +G V+Y + +
Sbjct: 3789369 YAQARTHTLDMKTGDATVEYNLYI 3789440
Score = 118 bits (253), Expect = 5e-025
Identities = 64/137 (46%), Positives = 70/137 (51%)
Frame = +3 / -2
Query: 279 VYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPLCSPAV 458
+Y T P V A PRA R P+PPT I P M +VLPL P
Sbjct: 3789430 LYSTVASPVFMSRVWVRAWA*PRAHRKTPVPPTTAISRTAAKTSLRPMMATVLPLYLPDW 3789251
Query: 459 NTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATTAPKLVDDVLEDAXCA 638
TKFM M V A *VPWARPT A R GP VSGSS+ TTAPK + D L A A
Sbjct: 3789250 KTKFMFMSSATVSLPALT*VPWARPTGDEAFRSGPDVSGSSITTTAPKKLADELVVAALA 3789071
Query: 639 MRTAVGFVPATTSWKYT 689
TAVG P TTS +YT
Sbjct: 3789070 TCTAVGLGPLTTSCQYT 3789020
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 177 bits (380), Expect = 2e-042
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -2 / -2
Query: 550 AAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVG 371
AAG VGRAQGTYTFADQ+ GLLM MNFVFTAG+HNGS+L+I+GRNEV+S VREMS+VG
Sbjct: 4008344 AAGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVG 4008165
Query: 370 GSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA*L 257
GSGKFRMARGY +A T+DSG SG T+V+YT+ VKA*L
Sbjct: 4008164 GSGKFRMARGYAEARTVDSGFKSGETIVEYTLFVKA*L 4008051
Score = 123 bits (263), Expect = 2e-026
Identities = 59/114 (51%), Positives = 68/114 (59%)
Frame = +3 / +1
Query: 252 TGS*ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMES 431
+ S ALT VY T V P++ PES V A YP AMRNLP PPT LI P +
Sbjct: 4008046 SSSYALTKRVYSTMVSPDLKPESTVRASAYPLAMRNLPEPPTTLISLTGDITSFRPMIAR 4008225
Query: 432 VLPLCSPAVNTKFMTMRRPNVCWSANV*VPWARPTSVPAARVGPVVSGSSMATT 593
+LPL SPAVNTKFM++RRP WSANV VP ARPT+ PAA + S T
Sbjct: 4008226 LLPLWSPAVNTKFMSIRRPITLWSANVYVPCARPTTSPAAAAAGELVSGSSMAT 4008387
Score = 113 bits (241), Expect = 2e-023
Identities = 49/60 (81%), Positives = 55/60 (91%)
Frame = -2 / -2
Query: 439 GSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNVKA* 260
GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V+YTV VKA*
Sbjct: 4056386 GSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFVKA* 4056207
Score = 109 bits (232), Expect = 4e-022
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G +NGS +++
Sbjct: 4081081 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTV 4081260
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G +V+Y V V
Sbjct: 4081261 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYV 4081413
>gb|AU075461.1|AU075461 AU075461 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60741_2Z, mRNA sequence
Length = 391
Score = 132 bits (282), Expect(2) = 2e-037
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = -2 / +2
Query: 466 FVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVV 287
FVFTAG+H GSTL+I+GRNEVLS VREMSIVGGSGKFRMARGYV+A T+DSGA SG T+V
Sbjct: 68 FVFTAGDHKGSTLAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIV 247
Query: 286 QYTVNVKA* 260
+YTV VKA*
Sbjct: 248 EYTVFVKA* 274
Score = 87.2 bits (184), Expect(2) = 3e-025
Identities = 42/67 (62%), Positives = 43/67 (64%)
Frame = +3 / -2
Query: 264 ALTLTVYWTTVVPEVAPESMVCACTYPRAMRNLPLPPTMLIXXXXXXXXXXPRMESVLPL 443
ALT TVY T V PE+APES V A T P AMRNLP PPTMLI P M VLPL
Sbjct: 270 ALTKTVYSTMVSPELAPESTVRAST*PLAMRNLPEPPTMLISLTAESTSFRPTMARVLPL 91
Query: 444 CSPAVNT 464
SPAVNT
Sbjct: 90 WSPAVNT 70
Score = 51.9 bits (107), Expect(2) = 3e-025
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +3 / -1
Query: 438 PLCSPAVNTKFMTMRRPNVCWSANV*VPWARP 533
PL +FM MRRPNV WSANV*+PWARP
Sbjct: 97 PLVVAGGEHEFMFMRRPNVFWSANV*LPWARP 2
Score = 48.3 bits (99), Expect(2) = 2e-037
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -2 / +3
Query: 532 GRAQGTYTFADQQTFGLLMVMN 467
GRAQG+YTFADQ+TFGLLM MN
Sbjct: 3 GRAQGSYTFADQKTFGLLMNMN 68
>gb|AACV01022472.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022472, whole
genome shotgun sequence
Length = 29399
Score = 109 bits (232), Expect(2) = 8e-025
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = -2 / -3
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G +NGS +++
Sbjct: 5118 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTV 4939
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G +V+Y V V
Sbjct: 4938 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYV 4786
Score = 28.6 bits (56), Expect(2) = 8e-025
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 685 YFHDVVAGTNPTAVRI 638
YFHD V+ +PTAVR+
Sbjct: 5196 YFHDKVSKPSPTAVRV 5149
>dbj|AK060077.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B12, full
insert sequence
Length = 981
Score = 109 bits (232), Expect(2) = 8e-025
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G +NGS +++
Sbjct: 289 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTV 468
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G +V+Y V V
Sbjct: 469 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYV 621
Score = 28.6 bits (56), Expect(2) = 8e-025
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 685 YFHDVVAGTNPTAVRI 638
YFHD V+ +PTAVR+
Sbjct: 211 YFHDKVSKPSPTAVRV 258
>gb|CF278089.1|CF278089 14ETL--03-N18.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-N18, mRNA sequence
Length = 679
Score = 109 bits (232), Expect(2) = 8e-025
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = -2 / +2
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G +NGS +++
Sbjct: 278 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTV 457
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G +V+Y V V
Sbjct: 458 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYV 610
Score = 28.6 bits (56), Expect(2) = 8e-025
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 685 YFHDVVAGTNPTAVRI 638
YFHD V+ +PTAVR+
Sbjct: 200 YFHDKVSKPSPTAVRV 247
>gb|CA756453.1|CA756453 BR030042000_PLATE_H05_40_046.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030042000_PLATE_H05_40_046.ab1 similar to NP_176762.1|
(NM_105259) dirigent protein, putative [Arabidopsis
thaliana], mRNA sequence
Length = 621
Score = 104 bits (221), Expect(2) = 3e-023
Identities = 47/111 (42%), Positives = 61/111 (54%)
Frame = -2 / +3
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F ++ + D T +GRAQG Y +DQ G L MN VFT G + GS +++
Sbjct: 237 FFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYXGSVVTV 416
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN DVREM ++GG+G FR ARGY QA T +G V+Y V V
Sbjct: 417 LGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAFVEYNVYV 569
Score = 28.6 bits (56), Expect(2) = 3e-023
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 685 YFHDVVAGTNPTAVRI 638
YFHD V+ +PTAVR+
Sbjct: 159 YFHDKVSKPSPTAVRV 206
>gb|AACV01022469.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022469, whole
genome shotgun sequence
Length = 5348
Score = 101 bits (215), Expect(2) = 2e-022
Identities = 42/89 (47%), Positives = 54/89 (60%)
Frame = -2 / -2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y +DQ G L MN V TAG +NGS +++LG N + +REM +VGG+ F
Sbjct: 2698 VGRAQGMYLSSDQVRIGFLQAMNIVLTAGPYNGSVITVLGSNHISDSIREMPVVGGTSAF 2519
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T + +V+Y V V
Sbjct: 2518 RFARGYAQARTYFLDSNGLDAIVEYNVYV 2432
Score = 28.6 bits (56), Expect(2) = 2e-022
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 601 FGAVVAIDDPLTTGP 557
FG V +DDPLT GP
Sbjct: 2761 FGTVYVMDDPLTEGP 2717
>gb|AZ128912.1|AZ128912 OSJNBb0064D04f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0064D04f, DNA
sequence
Length = 474
Score = 101 bits (215), Expect(2) = 2e-022
Identities = 42/89 (47%), Positives = 54/89 (60%)
Frame = -2 / -3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y +DQ G L MN V TAG +NGS +++LG N + +REM +VGG+ F
Sbjct: 406 VGRAQGMYLSSDQVRIGFLQAMNIVLTAGPYNGSVITVLGSNHISDSIREMPVVGGTSAF 227
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T + +V+Y V V
Sbjct: 226 RFARGYAQARTYFLDSNGLDAIVEYNVYV 140
Score = 28.6 bits (56), Expect(2) = 2e-022
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 601 FGAVVAIDDPLTTGP 557
FG V +DDPLT GP
Sbjct: 469 FGTVYVMDDPLTEGP 425
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 102 bits (217), Expect(2) = 7e-022
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -2 / -3
Query: 577 DPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLS 398
D T + A EVGRAQG Y + + L+M +N FTAGE+NGST++++G ++ +
Sbjct: 398191 DDALTETSSATSPEVGRAQGFYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTA 398012
Query: 397 DVREMSIVGGSGKFRMARGYVQAHTIDSGATSG 299
VRE+S+VGG+GKFRMA GYV T A++G
Sbjct: 398011 TVRELSVVGGTGKFRMATGYVVWKTASMSASTG 397913
Score = 25.4 bits (49), Expect(2) = 7e-022
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 685 YFHDVVAGTNPTAVRI 638
+ HDVV+G+ TAV++
Sbjct: 398302 FMHDVVSGSGQTAVQV 398255
>gb|CH401218.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000055
genomic scaffold, whole genome shotgun sequence
Length = 1431804
Score = 102 bits (217), Expect(2) = 7e-022
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -2 / -1
Query: 577 DPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLS 398
D T + A EVGRAQG Y + + L+M +N FTAGE+NGST++++G ++ +
Sbjct: 397095 DDALTETSSATSPEVGRAQGFYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTA 396916
Query: 397 DVREMSIVGGSGKFRMARGYVQAHTIDSGATSG 299
VRE+S+VGG+GKFRMA GYV T A++G
Sbjct: 396915 TVRELSVVGGTGKFRMATGYVVWKTASMSASTG 396817
Score = 25.4 bits (49), Expect(2) = 7e-022
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 685 YFHDVVAGTNPTAVRI 638
+ HDVV+G+ TAV++
Sbjct: 397206 FMHDVVSGSGQTAVQV 397159
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0585H11
Length = 149371
Score = 102 bits (217), Expect(2) = 7e-022
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -2 / -1
Query: 577 DPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLS 398
D T + A EVGRAQG Y + + L+M +N FTAGE+NGST++++G ++ +
Sbjct: 6418 DDALTETSSATSPEVGRAQGFYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTA 6239
Query: 397 DVREMSIVGGSGKFRMARGYVQAHTIDSGATSG 299
VRE+S+VGG+GKFRMA GYV T A++G
Sbjct: 6238 TVRELSVVGGTGKFRMATGYVVWKTASMSASTG 6140
Score = 25.4 bits (49), Expect(2) = 7e-022
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 685 YFHDVVAGTNPTAVRI 638
+ HDVV+G+ TAV++
Sbjct: 6529 FMHDVVSGSGQTAVQV 6482
>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:B1317D11
Length = 135043
Score = 102 bits (217), Expect(2) = 7e-022
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -2 / -3
Query: 577 DPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLS 398
D T + A EVGRAQG Y + + L+M +N FTAGE+NGST++++G ++ +
Sbjct: 128492 DDALTETSSATSPEVGRAQGFYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTA 128313
Query: 397 DVREMSIVGGSGKFRMARGYVQAHTIDSGATSG 299
VRE+S+VGG+GKFRMA GYV T A++G
Sbjct: 128312 TVRELSVVGGTGKFRMATGYVVWKTASMSASTG 128214
Score = 25.4 bits (49), Expect(2) = 7e-022
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 685 YFHDVVAGTNPTAVRI 638
+ HDVV+G+ TAV++
Sbjct: 128603 FMHDVVSGSGQTAVQV 128556
>gb|AACV01015027.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015027, whole
genome shotgun sequence
Length = 17580
Score = 102 bits (217), Expect(2) = 8e-022
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -2 / +2
Query: 577 DPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLS 398
D T + A EVGRAQG Y + + L+M +N FTAGE+NGST++++G ++ +
Sbjct: 14081 DDALTETSSATSPEVGRAQGFYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTA 14260
Query: 397 DVREMSIVGGSGKFRMARGYVQAHTIDSGATSG 299
VRE+S+VGG+GKFRMA GYV T A++G
Sbjct: 14261 TVRELSVVGGTGKFRMATGYVVWKTASMSASTG 14359
Score = 25.4 bits (49), Expect(2) = 8e-022
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 685 YFHDVVAGTNPTAVRI 638
+ HDVV+G+ TAV++
Sbjct: 13970 FMHDVVSGSGQTAVQV 14017
>dbj|AK109288.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-C06, full
insert sequence
Length = 1001
Score = 102 bits (217), Expect(2) = 8e-022
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -2 / -2
Query: 577 DPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLS 398
D T + A EVGRAQG Y + + L+M +N FTAGE+NGST++++G ++ +
Sbjct: 547 DDALTETSSATSPEVGRAQGFYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTA 368
Query: 397 DVREMSIVGGSGKFRMARGYVQAHTIDSGATSG 299
VRE+S+VGG+GKFRMA GYV T A++G
Sbjct: 367 TVRELSVVGGTGKFRMATGYVVWKTASMSASTG 269
Score = 25.4 bits (49), Expect(2) = 8e-022
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 685 YFHDVVAGTNPTAVRI 638
+ HDVV+G+ TAV++
Sbjct: 658 FMHDVVSGSGQTAVQV 611
>dbj|AK106062.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G06, full
insert sequence
Length = 958
Score = 102 bits (217), Expect(2) = 8e-022
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -2 / +1
Query: 577 DPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLS 398
D T + A EVGRAQG Y + + L+M +N FTAGE+NGST++++G ++ +
Sbjct: 244 DDALTETSSATSPEVGRAQGFYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTA 423
Query: 397 DVREMSIVGGSGKFRMARGYVQAHTIDSGATSG 299
VRE+S+VGG+GKFRMA GYV T A++G
Sbjct: 424 TVRELSVVGGTGKFRMATGYVVWKTASMSASTG 522
Score = 25.4 bits (49), Expect(2) = 8e-022
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 685 YFHDVVAGTNPTAVRI 638
+ HDVV+G+ TAV++
Sbjct: 133 FMHDVVSGSGQTAVQV 180
>dbj|AK119790.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-A02, full
insert sequence
Length = 957
Score = 102 bits (217), Expect(2) = 8e-022
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -2 / +3
Query: 577 DPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLS 398
D T + A EVGRAQG Y + + L+M +N FTAGE+NGST++++G ++ +
Sbjct: 240 DDALTETSSATSPEVGRAQGFYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTA 419
Query: 397 DVREMSIVGGSGKFRMARGYVQAHTIDSGATSG 299
VRE+S+VGG+GKFRMA GYV T A++G
Sbjct: 420 TVRELSVVGGTGKFRMATGYVVWKTASMSASTG 518
Score = 25.4 bits (49), Expect(2) = 8e-022
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 685 YFHDVVAGTNPTAVRI 638
+ HDVV+G+ TAV++
Sbjct: 129 FMHDVVSGSGQTAVQV 176
>ref|NM_186138.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 958
Score = 102 bits (217), Expect(2) = 8e-022
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -2 / +1
Query: 577 DPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLS 398
D T + A EVGRAQG Y + + L+M +N FTAGE+NGST++++G ++ +
Sbjct: 244 DDALTETSSATSPEVGRAQGFYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTA 423
Query: 397 DVREMSIVGGSGKFRMARGYVQAHTIDSGATSG 299
VRE+S+VGG+GKFRMA GYV T A++G
Sbjct: 424 TVRELSVVGGTGKFRMATGYVVWKTASMSASTG 522
Score = 25.4 bits (49), Expect(2) = 8e-022
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 685 YFHDVVAGTNPTAVRI 638
+ HDVV+G+ TAV++
Sbjct: 133 FMHDVVSGSGQTAVQV 180
>gb|CF278090.1|CF278090 14ETL--03-N18.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-N18, mRNA sequence
Length = 558
Score = 104 bits (222), Expect(2) = 6e-021
Identities = 44/89 (49%), Positives = 56/89 (62%)
Frame = -2 / -2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG +DQ G L MN VFT G +NGS +++LGRN DVREM ++GG+G F
Sbjct: 512 MGRAQGAVHGSDQAKLGFLQAMNLVFTDGTYNGSVVTVLGRNCPFDDVREMPVIGGTGAF 333
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T +G +V+Y V V
Sbjct: 332 RFARGYAQARTHTLDLKTGDAIVEYNVYV 246
Score = 21.7 bits (41), Expect(2) = 6e-021
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -2
Query: 583 IDDPLTTGP 557
+DDPLT GP
Sbjct: 557 MDDPLTEGP 531
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,233,635,470
Number of Sequences: 438736
Number of extensions: 42994675
Number of successful extensions: 524183
Number of sequences better than 1.0e-020: 48
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 159735467056
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)