TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3067043.2.1
(834 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK101220.1| Oryza sativa (japonica cultivar-group) cDNA... 265 3e-089
ref|XM_464326.1| Oryza sativa (japonica cultivar-group), mRNA 265 3e-089
gb|AACV01003484.1| Oryza sativa (japonica cultivar-group) c... 103 9e-067
dbj|AP004087.3| Oryza sativa (japonica cultivar-group) geno... 103 1e-062
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 103 9e-059
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 103 3e-055
ref|XM_482629.1| Oryza sativa (japonica cultivar-group), mRNA 159 7e-053
dbj|AK069725.1| Oryza sativa (japonica cultivar-group) cDNA... 156 4e-052
dbj|AK068983.1| Oryza sativa (japonica cultivar-group) cDNA... 208 6e-052
ref|NM_191361.1| Oryza sativa (japonica cultivar-group), p... 208 6e-052
dbj|AK105512.1| Oryza sativa (japonica cultivar-group) cDNA... 142 1e-043
gb|AQ915527.1|AQ915527 nbeb0058D18f CUGI Rice BAC Library (... 101 4e-034
gb|AACV01018569.1| Oryza sativa (japonica cultivar-group) c... 80 4e-031
gb|AACV01002400.1| Oryza sativa (japonica cultivar-group) c... 73 6e-029
dbj|AP003890.1| Oryza sativa (japonica cultivar-group) chro... 80 2e-028
dbj|AP004703.3| Oryza sativa (japonica cultivar-group) geno... 80 4e-028
dbj|AP003239.3| Oryza sativa (japonica cultivar-group) geno... 73 2e-027
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 73 4e-024
gb|CV728275.1|CV728275 14Salt--06-O10.g1 Salt treated rice ... 66 7e-024
gb|CA754252.1|CA754252 BR040012000_PLATE_H10_80_091.ab1 OA ... 114 1e-023
gb|AACV01025341.1| Oryza sativa (japonica cultivar-group) c... 59 2e-023
emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC O... 59 7e-022
emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC O... 59 1e-021
>dbj|AK101220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031C20, full
insert sequence
Length = 1435
Score = 265 bits (574), Expect(2) = 3e-089
Identities = 111/155 (71%), Positives = 125/155 (80%)
Frame = +3 / +3
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
EAE L+AKA YQKPEDVPFFPQDLPSPLFPTK PKVLH FAS V+VNDAIWKMYF+EL
Sbjct: 249 EAEVLHAKAGQYQKPEDVPFFPQDLPSPLFPTKDYPKVLHSFASSVSVNDAIWKMYFNEL 428
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLFTVDGDDG+YA+TVALD ACL+ LS+RIHIGKYVAEVKFKDA Q+YS LI+ KD+ +
Sbjct: 429 LPLFTVDGDDGNYAETVALDFACLKALSRRIHIGKYVAEVKFKDASQDYSPLIRAKDTKA 608
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNA 467
LM++LTF FGQNVTL+DNA
Sbjct: 609 LMNLLTFKAVEEKVKRRVEKKARIFGQNVTLEDNA 713
Score = 216 bits (467), Expect(2) = 1e-063
Identities = 106/155 (68%), Positives = 114/155 (73%)
Frame = -3 / -1
Query: 466 ALSSKVTFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATY 287
ALSSKVTF PN+ LNVS IR L+SF+ IS L S ASLNFTSATY
Sbjct: 712 ALSSKVTF*PNILAFFSTLLFTFSSTALNVSRFIRALVSFARISGL*SWEASLNFTSATY 533
Query: 286 LPI*ILCDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFG 107
LPI*IL DR RHAKS+ATV A*LPSSPSTVN+GSNS KYIFHIASFT+T++AK CKTFG
Sbjct: 532 LPI*ILLDRAFRHAKSNATVSA*LPSSPSTVNSGSNSLKYIFHIASFTLTDDAKECKTFG 353
Query: 106 EGFVGKRGEGRS*GKNGTSSGF**CXAFALRASAS 2
VG RGEGRS GKNGTSSGF C A A R SAS
Sbjct: 352 *SLVGNRGEGRSWGKNGTSSGFWYCPALACRTSAS 248
Score = 175 bits (377), Expect(2) = 5e-049
Identities = 78/127 (61%), Positives = 88/127 (69%)
Frame = +2 / +2
Query: 2 GSRGPQRKGXTLSKARRCSILPSRSTLTSLSYKAFPKGLAPFCFIGHRE*CNMENVF**I 181
GSRG R+G T+ KARRCSIL RS TS+SY+ PKG A FC I E*CNME+VF +
Sbjct: 248 GSRGSARQGRTIPKARRCSILSPRSPFTSISYQRLPKGFALFCIISQCE*CNMEDVFQRV 427
Query: 182 APVIHC*W**WQLCTNSCTGFSVSAGSITKNSYW*ICC*GEVQRRSSRI*STNKRKGQQF 361
A IHC W *W LC NSC F +S G + KNSYW*ICC*GEVQR R+*STN KG Q
Sbjct: 428 ASTIHCGWR*W*LCRNSCIRFCMSEGPVKKNSYW*ICC*GEVQRCFPRL*STNPCKGYQG 607
Query: 362 SDGYADI 382
SD A+I
Sbjct: 608 SDESANI 628
Score = 171 bits (369), Expect(2) = 3e-048
Identities = 84/154 (54%), Positives = 100/154 (64%)
Frame = -2 / -3
Query: 464 IVIQGDVLPERPXXXXXXXXXXXXXXLECQHIHQRIAVLFFY*STIFLRSVFELHLSNIF 285
IV+Q D+L + P LEC IHQ + +L * TI L S+FELHLSNIF
Sbjct: 710 IVLQSDILTKYPGLLLYSPFHLLFNRLEC*QIHQSLGILCTD*WTIILGSIFELHLSNIF 531
Query: 284 TNMNSL**NLQTR*IQCNCLCIAAIITINSE*REQFIKIHFPYCIIHGDQ*SKRVQDLWG 105
TNMNS * LQT I CNC CI II+I+SE* +Q ++IH PYCIIH D * KRVQ+LW
Sbjct: 530 TNMNSS*QGLQTCKI*CNCFCIVTIISIHSE*WKQLVEIHLPYCIIHTD**CKRVQNLWV 351
Query: 104 RLCRKER*G*ILREEWNIFWLLIMSSLCVEGLCF 3
RK R* IL +EWNIFWLL++S L V+ L F
Sbjct: 350 IFGRK*R*REILGKEWNIFWLLVLSGLGVQNLGF 249
Score = 160 bits (345), Expect = 1e-037
Identities = 83/155 (53%), Positives = 92/155 (59%)
Frame = -1 / -2
Query: 465 HCHPR*RSARTXXXXXXXXXXXXXPQP*MSAYPSENCCPFLLLVDYILEERL*TSPQQHI 286
HC P+* S + P*M A SE P LVDY L + L*TSPQQHI
Sbjct: 711 HCPPK*HSDQISWPSSLLSFSPSLQPP*MLADSSEPWYPLHGLVDYNLGKHL*TSPQQHI 532
Query: 285 YQYEFFVIEPADTLNPVQLFVHSCHHHHQQ*ITGAIHQNTFSILHHSR*PMKQKGARPLG 106
YQYEFF+ P+D N +QLF+HS HH H Q*I A NT SILHHS * M QK A+PLG
Sbjct: 531 YQYEFFLTGPSDMQNLMQLFLHSYHHLHPQ*IVEATR*NTSSILHHSH*LMMQKSAKPLG 352
Query: 105 KAL*EREVRVDLEGRMEHLLAFDNVXPLR*GPLLP 1
*E EV+ DL RMEHLLAF V P R P LP
Sbjct: 351 NLW*EIEVKGDLGERMEHLLAFGIVRPWRAEPRLP 247
Score = 142 bits (305), Expect = 5e-032
Identities = 78/128 (60%), Positives = 83/128 (64%)
Frame = +1 / +1
Query: 1 GKQRPSTQRLDIIKSQKMFHSSLKIYPHLSFLQSLPQRSCTLLLHWSP*MMQYGKCILMN 180
GK R T R D KSQKMFHS KI HL FL + QR CTLL H S *MMQYG+CI +
Sbjct: 247 GKPRFCTPRPDNTKSQKMFHSFPKISLHLYFLPKITQRFCTLLHHQSV*MMQYGRCISTS 426
Query: 181 CSRYSLLMVMMAAMHKQLHWI*RVCRFYHKEFILVNMLLR*SSKTLLKNIVD**KKRTAI 360
C YSL M MM M KQLH I V R +EFILVNMLLR*SSK L K IV * +R
Sbjct: 427 CFHYSLWMEMMVTMQKQLH*ILHV*RPCQEEFILVNMLLR*SSKMLPKIIVH*SVQRIPR 606
Query: 361 L*WIC*HS 384
L* IC*HS
Sbjct: 607 L**IC*HS 630
Score = 87.7 bits (185), Expect(2) = 3e-089
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +3 / +3
Query: 471 AGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
AGDSECKV+P+VLSKLYD WVMPLTKDVEVEYLLRRLD*
Sbjct: 732 AGDSECKVNPEVLSKLYDLWVMPLTKDVEVEYLLRRLD* 848
Score = 51.0 bits (105), Expect(2) = 1e-063
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -3 / -1
Query: 607 ANRVITDQXXXXXXXXXXXSLVSGITH*SYSLESTLGSTLHSLSPAV 467
A ++ +Q S V GITH SYSL+ST G TLHSLSPA+
Sbjct: 868 AENILANQSRRRRRYSTSTSFVKGITHRSYSLDSTSGLTLHSLSPAL 728
Score = 44.6 bits (91), Expect(2) = 3e-048
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -1 / -2
Query: 567 DTRLRHPWSVASPTDHTAWRALWDRPCTRCH 475
DT+L+HP S A PTDH A AL D CT CH
Sbjct: 828 DTQLQHPSSKALPTDHIA*IALQD*LCTHCH 736
Score = 43.7 bits (89), Expect(2) = 5e-049
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +2 / +2
Query: 470 CW*QRVQGRSQSALQAV*SVGDATDQGCRSRVSPAPPRLISDHPISC 610
C *Q VQ S SA+ A+*SVG+A D+GC S VS P LI + SC
Sbjct: 731 CR*Q*VQS*S*SAI*AI*SVGNAFDEGC*S*VSSPPS*LIRQNIFSC 871
>ref|XM_464326.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1433
Score = 265 bits (574), Expect(2) = 3e-089
Identities = 111/155 (71%), Positives = 125/155 (80%)
Frame = +3 / +2
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
EAE L+AKA YQKPEDVPFFPQDLPSPLFPTK PKVLH FAS V+VNDAIWKMYF+EL
Sbjct: 248 EAEVLHAKAGQYQKPEDVPFFPQDLPSPLFPTKDYPKVLHSFASSVSVNDAIWKMYFNEL 427
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLFTVDGDDG+YA+TVALD ACL+ LS+RIHIGKYVAEVKFKDA Q+YS LI+ KD+ +
Sbjct: 428 LPLFTVDGDDGNYAETVALDFACLKALSRRIHIGKYVAEVKFKDASQDYSPLIRAKDTKA 607
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNA 467
LM++LTF FGQNVTL+DNA
Sbjct: 608 LMNLLTFKAVEEKVKRRVEKKARIFGQNVTLEDNA 712
Score = 216 bits (467), Expect(2) = 1e-063
Identities = 106/155 (68%), Positives = 114/155 (73%)
Frame = -3 / -3
Query: 466 ALSSKVTFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATY 287
ALSSKVTF PN+ LNVS IR L+SF+ IS L S ASLNFTSATY
Sbjct: 711 ALSSKVTF*PNILAFFSTLLFTFSSTALNVSRFIRALVSFARISGL*SWEASLNFTSATY 532
Query: 286 LPI*ILCDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFG 107
LPI*IL DR RHAKS+ATV A*LPSSPSTVN+GSNS KYIFHIASFT+T++AK CKTFG
Sbjct: 531 LPI*ILLDRAFRHAKSNATVSA*LPSSPSTVNSGSNSLKYIFHIASFTLTDDAKECKTFG 352
Query: 106 EGFVGKRGEGRS*GKNGTSSGF**CXAFALRASAS 2
VG RGEGRS GKNGTSSGF C A A R SAS
Sbjct: 351 *SLVGNRGEGRSWGKNGTSSGFWYCPALACRTSAS 247
Score = 175 bits (377), Expect(2) = 5e-049
Identities = 78/127 (61%), Positives = 88/127 (69%)
Frame = +2 / +1
Query: 2 GSRGPQRKGXTLSKARRCSILPSRSTLTSLSYKAFPKGLAPFCFIGHRE*CNMENVF**I 181
GSRG R+G T+ KARRCSIL RS TS+SY+ PKG A FC I E*CNME+VF +
Sbjct: 247 GSRGSARQGRTIPKARRCSILSPRSPFTSISYQRLPKGFALFCIISQCE*CNMEDVFQRV 426
Query: 182 APVIHC*W**WQLCTNSCTGFSVSAGSITKNSYW*ICC*GEVQRRSSRI*STNKRKGQQF 361
A IHC W *W LC NSC F +S G + KNSYW*ICC*GEVQR R+*STN KG Q
Sbjct: 427 ASTIHCGWR*W*LCRNSCIRFCMSEGPVKKNSYW*ICC*GEVQRCFPRL*STNPCKGYQG 606
Query: 362 SDGYADI 382
SD A+I
Sbjct: 607 SDESANI 627
Score = 171 bits (369), Expect(2) = 3e-048
Identities = 84/154 (54%), Positives = 100/154 (64%)
Frame = -2 / -2
Query: 464 IVIQGDVLPERPXXXXXXXXXXXXXXLECQHIHQRIAVLFFY*STIFLRSVFELHLSNIF 285
IV+Q D+L + P LEC IHQ + +L * TI L S+FELHLSNIF
Sbjct: 709 IVLQSDILTKYPGLLLYSPFHLLFNRLEC*QIHQSLGILCTD*WTIILGSIFELHLSNIF 530
Query: 284 TNMNSL**NLQTR*IQCNCLCIAAIITINSE*REQFIKIHFPYCIIHGDQ*SKRVQDLWG 105
TNMNS * LQT I CNC CI II+I+SE* +Q ++IH PYCIIH D * KRVQ+LW
Sbjct: 529 TNMNSS*QGLQTCKI*CNCFCIVTIISIHSE*WKQLVEIHLPYCIIHTD**CKRVQNLWV 350
Query: 104 RLCRKER*G*ILREEWNIFWLLIMSSLCVEGLCF 3
RK R* IL +EWNIFWLL++S L V+ L F
Sbjct: 349 IFGRK*R*REILGKEWNIFWLLVLSGLGVQNLGF 248
Score = 160 bits (345), Expect = 1e-037
Identities = 83/155 (53%), Positives = 92/155 (59%)
Frame = -1 / -1
Query: 465 HCHPR*RSARTXXXXXXXXXXXXXPQP*MSAYPSENCCPFLLLVDYILEERL*TSPQQHI 286
HC P+* S + P*M A SE P LVDY L + L*TSPQQHI
Sbjct: 710 HCPPK*HSDQISWPSSLLSFSPSLQPP*MLADSSEPWYPLHGLVDYNLGKHL*TSPQQHI 531
Query: 285 YQYEFFVIEPADTLNPVQLFVHSCHHHHQQ*ITGAIHQNTFSILHHSR*PMKQKGARPLG 106
YQYEFF+ P+D N +QLF+HS HH H Q*I A NT SILHHS * M QK A+PLG
Sbjct: 530 YQYEFFLTGPSDMQNLMQLFLHSYHHLHPQ*IVEATR*NTSSILHHSH*LMMQKSAKPLG 351
Query: 105 KAL*EREVRVDLEGRMEHLLAFDNVXPLR*GPLLP 1
*E EV+ DL RMEHLLAF V P R P LP
Sbjct: 350 NLW*EIEVKGDLGERMEHLLAFGIVRPWRAEPRLP 246
Score = 142 bits (305), Expect = 5e-032
Identities = 78/128 (60%), Positives = 83/128 (64%)
Frame = +1 / +3
Query: 1 GKQRPSTQRLDIIKSQKMFHSSLKIYPHLSFLQSLPQRSCTLLLHWSP*MMQYGKCILMN 180
GK R T R D KSQKMFHS KI HL FL + QR CTLL H S *MMQYG+CI +
Sbjct: 246 GKPRFCTPRPDNTKSQKMFHSFPKISLHLYFLPKITQRFCTLLHHQSV*MMQYGRCISTS 425
Query: 181 CSRYSLLMVMMAAMHKQLHWI*RVCRFYHKEFILVNMLLR*SSKTLLKNIVD**KKRTAI 360
C YSL M MM M KQLH I V R +EFILVNMLLR*SSK L K IV * +R
Sbjct: 426 CFHYSLWMEMMVTMQKQLH*ILHV*RPCQEEFILVNMLLR*SSKMLPKIIVH*SVQRIPR 605
Query: 361 L*WIC*HS 384
L* IC*HS
Sbjct: 606 L**IC*HS 629
Score = 87.7 bits (185), Expect(2) = 3e-089
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +3 / +2
Query: 471 AGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
AGDSECKV+P+VLSKLYD WVMPLTKDVEVEYLLRRLD*
Sbjct: 731 AGDSECKVNPEVLSKLYDLWVMPLTKDVEVEYLLRRLD* 847
Score = 51.0 bits (105), Expect(2) = 1e-063
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -3 / -3
Query: 607 ANRVITDQXXXXXXXXXXXSLVSGITH*SYSLESTLGSTLHSLSPAV 467
A ++ +Q S V GITH SYSL+ST G TLHSLSPA+
Sbjct: 867 AENILANQSRRRRRYSTSTSFVKGITHRSYSLDSTSGLTLHSLSPAL 727
Score = 44.6 bits (91), Expect(2) = 3e-048
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -1 / -1
Query: 567 DTRLRHPWSVASPTDHTAWRALWDRPCTRCH 475
DT+L+HP S A PTDH A AL D CT CH
Sbjct: 827 DTQLQHPSSKALPTDHIA*IALQD*LCTHCH 735
Score = 43.7 bits (89), Expect(2) = 5e-049
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +2 / +1
Query: 470 CW*QRVQGRSQSALQAV*SVGDATDQGCRSRVSPAPPRLISDHPISC 610
C *Q VQ S SA+ A+*SVG+A D+GC S VS P LI + SC
Sbjct: 730 CR*Q*VQS*S*SAI*AI*SVGNAFDEGC*S*VSSPPS*LIRQNIFSC 870
>gb|AACV01003484.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003484, whole
genome shotgun sequence
Length = 14108
Score = 103 bits (219), Expect(5) = 9e-067
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / -3
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
VLH FAS V+VNDAIWKMYF+ELLPLFTVDGDDG+YA+TVALD ACL+V
Sbjct: 4770 VLHSFASSVSVNDAIWKMYFNELLPLFTVDGDDGNYAETVALDFACLKV 4624
Score = 94.1 bits (199), Expect(5) = 5e-045
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = -3 / +2
Query: 259 TCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKT 113
T RHAKS+ATV A*LPSSPSTVN+GSNS KYIFHIASFT+T++AK CKT
Sbjct: 4625 TFRHAKSNATVSA*LPSSPSTVNSGSNSLKYIFHIASFTLTDDAKECKT 4771
Score = 87.7 bits (185), Expect(5) = 9e-067
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +3 / -3
Query: 471 AGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
AGDSECKV+P+VLSKLYD WVMPLTKDVEVEYLLRRLD*
Sbjct: 3909 AGDSECKVNPEVLSKLYDLWVMPLTKDVEVEYLLRRLD* 3793
Score = 71.6 bits (150), Expect(5) = 6e-031
Identities = 31/49 (63%), Positives = 37/49 (75%)
Frame = -2 / +1
Query: 257 LQTR*IQCNCLCIAAIITINSE*REQFIKIHFPYCIIHGDQ*SKRVQDL 111
LQT I CNC CI II+I+SE* +Q ++IH PYCIIH D * KRVQ+L
Sbjct: 4627 LQTCKI*CNCFCIVTIISIHSE*WKQLVEIHLPYCIIHTD**CKRVQNL 4773
Score = 68.0 bits (142), Expect(3) = 9e-021
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = -1 / +3
Query: 258 PADTLNPVQLFVHSCHHHHQQ*ITGAIHQNTFSILHHSR*PMKQKGARPLGKAL 97
P+D N +QLF+HS HH H Q*I A NT SILHHS * M QK A+P KA+
Sbjct: 4626 PSDMQNLMQLFLHSYHHLHPQ*IVEATR*NTSSILHHSH*LMMQKSAKPNNKAI 4787
Score = 67.5 bits (141), Expect(5) = 9e-067
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +3 / -3
Query: 27 AXHYQKPEDVPFFPQDLPSPLFPTKPSPKV 116
A YQKPEDVPFFPQDLPSPLFPTK PKV
Sbjct: 4944 AGQYQKPEDVPFFPQDLPSPLFPTKDYPKV 4855
Score = 66.6 bits (139), Expect(4) = 2e-031
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +2 / -2
Query: 113 GLAPFCFIGHRE*CNMENVF**IAPVIHC*W**WQLCTNSCTGFSVSAGS 262
G A FC I E*CNME+VF +A IHC W *W LC NSC F +S G+
Sbjct: 4771 GFALFCIISQCE*CNMEDVFQRVASTIHCGWR*W*LCRNSCIRFCMSEGT 4622
Score = 57.9 bits (120), Expect(5) = 9e-067
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3 / -2
Query: 261 LSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LS+RIHIGKYVAEVKFKDA Q+YS LI+ K
Sbjct: 4417 LSRRIHIGKYVAEVKFKDASQDYSPLIRAK 4328
Score = 54.7 bits (113), Expect(4) = 2e-031
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +2 / -1
Query: 257 GSITKNSYW*ICC*GEVQRRSSRI*STNKRKG 352
G + KNSYW*ICC*GEVQR R+*STN KG
Sbjct: 4421 GPVKKNSYW*ICC*GEVQRCFPRL*STNPCKG 4326
Score = 51.0 bits (105), Expect(5) = 5e-045
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -3 / +2
Query: 115 TFGEGFVGKRGEGRS*GKNGTSSGF**CXAFAL 17
TFG VG RGEGRS GKNGTSSGF C A+ +
Sbjct: 4856 TFG*SLVGNRGEGRSWGKNGTSSGFWYCPAYQI 4954
Score = 51.0 bits (105), Expect(5) = 5e-045
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1 / +1
Query: 339 LVDYILEERL*TSPQQHIYQYEFFVIEP 256
LVDY L + L*TSPQQHIYQYEFF+ P
Sbjct: 4339 LVDYNLGKHL*TSPQQHIYQYEFFLTGP 4422
Score = 51.0 bits (105), Expect(5) = 5e-045
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -3 / +2
Query: 607 ANRVITDQXXXXXXXXXXXSLVSGITH*SYSLESTLGSTLHSLSPAV 467
A ++ +Q S V GITH SYSL+ST G TLHSLSPA+
Sbjct: 3773 AENILANQSRRRRRYSTSTSFVKGITHRSYSLDSTSGLTLHSLSPAL 3913
Score = 47.3 bits (97), Expect(4) = 2e-031
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2 / -2
Query: 26 GXTLSKARRCSILPSRSTLTSLSYKAFPKG 115
G T+ KARRCSIL RS TS+SY+ PKG
Sbjct: 4945 GRTIPKARRCSILSPRSPFTSISYQRLPKG 4856
Score = 46.4 bits (95), Expect(5) = 6e-031
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2 / +2
Query: 332 TIFLRSVFELHLSNIFTNMNSL**NLQ 252
TI L S+FELHLSNIFTNMNS * LQ
Sbjct: 4346 TIILGSIFELHLSNIFTNMNSS*QGLQ 4426
Score = 45.1 bits (92), Expect(3) = 9e-021
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = -3 / +3
Query: 352 SFSFISRLYS*GASLNFTSATYLPI*ILCDR 260
+F+ IS L S ASLNFTSATYLPI*IL DR
Sbjct: 4326 TFARISGL*SWEASLNFTSATYLPI*ILLDR 4418
Score = 44.6 bits (91), Expect(5) = 6e-031
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -1 / +3
Query: 567 DTRLRHPWSVASPTDHTAWRALWDRPCTRCH 475
DT+L+HP S A PTDH A AL D CT CH
Sbjct: 3813 DTQLQHPSSKALPTDHIA*IALQD*LCTHCH 3905
Score = 43.7 bits (89), Expect(4) = 2e-031
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +2 / -2
Query: 470 CW*QRVQGRSQSALQAV*SVGDATDQGCRSRVSPAPPRLISDHPISC 610
C *Q VQ S SA+ A+*SVG+A D+GC S VS P LI + SC
Sbjct: 3910 CR*Q*VQS*S*SAI*AI*SVGNAFDEGC*S*VSSPPS*LIRQNIFSC 3770
Score = 41.8 bits (85), Expect(5) = 6e-031
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1 / +3
Query: 114 PLGKAL*EREVRVDLEGRMEHLLAFDNVXPLR 19
PLG *E EV+ DL RMEHLLAF V P+R
Sbjct: 4857 PLGNLW*EIEVKGDLGERMEHLLAFGIVRPIR 4952
Score = 40.9 bits (83), Expect(3) = 9e-021
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2 / +1
Query: 113 LWGRLCRKER*G*ILREEWNIFWLLIMSSL 24
LW RK R* IL +EWNIFWLL++S L
Sbjct: 4858 LWVIFGRK*R*REILGKEWNIFWLLVLSGL 4947
Score = 38.2 bits (77), Expect(5) = 9e-067
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3 / -3
Query: 345 EKDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNA 467
++D+ +LM++LTF FGQNVTL+DNA
Sbjct: 4050 QQDTKALMNLLTFKAVEEKVKRRVEKKARIFGQNVTLEDNA 3928
Score = 33.1 bits (66), Expect(5) = 5e-045
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -3 / +2
Query: 466 ALSSKVTFCPNVXXXXXXXXXXXXXXXLNVSISIRELLS 350
ALSSKVTF PN+ LNVS IR L+S
Sbjct: 3929 ALSSKVTF*PNILAFFSTLLFTFSSTALNVSRFIRALVS 4045
Score = 27.2 bits (53), Expect(5) = 6e-031
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2 / +1
Query: 464 IVIQGDVLPERPXXXXXXXXXXXXXXLECQHIHQRIAVL 348
IV+Q D+L + P LEC IHQ + +L
Sbjct: 3931 IVLQSDILTKYPGLLLYSPFHLLFNRLEC*QIHQSLGIL 4047
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1297_C09
Length = 163378
Score = 103 bits (219), Expect(5) = 1e-062
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / -1
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
VLH FAS V+VNDAIWKMYF+ELLPLFTVDGDDG+YA+TVALD ACL+V
Sbjct: 23470 VLHSFASSVSVNDAIWKMYFNELLPLFTVDGDDGNYAETVALDFACLKV 23324
Score = 94.1 bits (199), Expect(5) = 6e-041
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = -3 / +3
Query: 259 TCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKT 113
T RHAKS+ATV A*LPSSPSTVN+GSNS KYIFHIASFT+T++AK CKT
Sbjct: 23325 TFRHAKSNATVSA*LPSSPSTVNSGSNSLKYIFHIASFTLTDDAKECKT 23471
Score = 87.7 bits (185), Expect(5) = 1e-062
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +3 / -1
Query: 471 AGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
AGDSECKV+P+VLSKLYD WVMPLTKDVEVEYLLRRLD*
Sbjct: 22609 AGDSECKVNPEVLSKLYDLWVMPLTKDVEVEYLLRRLD* 22493
Score = 71.6 bits (150), Expect(4) = 4e-026
Identities = 31/49 (63%), Positives = 37/49 (75%)
Frame = -2 / +2
Query: 257 LQTR*IQCNCLCIAAIITINSE*REQFIKIHFPYCIIHGDQ*SKRVQDL 111
LQT I CNC CI II+I+SE* +Q ++IH PYCIIH D * KRVQ+L
Sbjct: 23327 LQTCKI*CNCFCIVTIISIHSE*WKQLVEIHLPYCIIHTD**CKRVQNL 23473
Score = 67.5 bits (141), Expect(5) = 1e-062
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +3 / -1
Query: 27 AXHYQKPEDVPFFPQDLPSPLFPTKPSPKV 116
A YQKPEDVPFFPQDLPSPLFPTK PKV
Sbjct: 23644 AGQYQKPEDVPFFPQDLPSPLFPTKDYPKV 23555
Score = 66.6 bits (139), Expect(4) = 2e-028
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +2 / -3
Query: 113 GLAPFCFIGHRE*CNMENVF**IAPVIHC*W**WQLCTNSCTGFSVSAGS 262
G A FC I E*CNME+VF +A IHC W *W LC NSC F +S G+
Sbjct: 23471 GFALFCIISQCE*CNMEDVFQRVASTIHCGWR*W*LCRNSCIRFCMSEGT 23322
Score = 57.9 bits (120), Expect(5) = 1e-062
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3 / -3
Query: 261 LSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LS+RIHIGKYVAEVKFKDA Q+YS LI+ K
Sbjct: 23117 LSRRIHIGKYVAEVKFKDASQDYSPLIRAK 23028
Score = 54.7 bits (113), Expect(4) = 2e-028
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +2 / -2
Query: 257 GSITKNSYW*ICC*GEVQRRSSRI*STNKRKG 352
G + KNSYW*ICC*GEVQR R+*STN KG
Sbjct: 23121 GPVKKNSYW*ICC*GEVQRCFPRL*STNPCKG 23026
Score = 51.0 bits (105), Expect(5) = 6e-041
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -3 / +3
Query: 115 TFGEGFVGKRGEGRS*GKNGTSSGF**CXAFAL 17
TFG VG RGEGRS GKNGTSSGF C A+ +
Sbjct: 23556 TFG*SLVGNRGEGRSWGKNGTSSGFWYCPAYQI 23654
Score = 51.0 bits (105), Expect(5) = 6e-041
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1 / +2
Query: 339 LVDYILEERL*TSPQQHIYQYEFFVIEP 256
LVDY L + L*TSPQQHIYQYEFF+ P
Sbjct: 23039 LVDYNLGKHL*TSPQQHIYQYEFFLTGP 23122
Score = 51.0 bits (105), Expect(5) = 6e-041
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -3 / +3
Query: 607 ANRVITDQXXXXXXXXXXXSLVSGITH*SYSLESTLGSTLHSLSPAV 467
A ++ +Q S V GITH SYSL+ST G TLHSLSPA+
Sbjct: 22473 AENILANQSRRRRRYSTSTSFVKGITHRSYSLDSTSGLTLHSLSPAL 22613
Score = 47.3 bits (97), Expect(4) = 2e-028
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2 / -3
Query: 26 GXTLSKARRCSILPSRSTLTSLSYKAFPKG 115
G T+ KARRCSIL RS TS+SY+ PKG
Sbjct: 23645 GRTIPKARRCSILSPRSPFTSISYQRLPKG 23556
Score = 46.4 bits (95), Expect(4) = 4e-026
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2 / +3
Query: 332 TIFLRSVFELHLSNIFTNMNSL**NLQ 252
TI L S+FELHLSNIFTNMNS * LQ
Sbjct: 23046 TIILGSIFELHLSNIFTNMNSS*QGLQ 23126
Score = 44.6 bits (91), Expect(4) = 4e-026
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -1 / +1
Query: 567 DTRLRHPWSVASPTDHTAWRALWDRPCTRCH 475
DT+L+HP S A PTDH A AL D CT CH
Sbjct: 22513 DTQLQHPSSKALPTDHIA*IALQD*LCTHCH 22605
Score = 43.7 bits (89), Expect(4) = 2e-028
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +2 / -3
Query: 470 CW*QRVQGRSQSALQAV*SVGDATDQGCRSRVSPAPPRLISDHPISC 610
C *Q VQ S SA+ A+*SVG+A D+GC S VS P LI + SC
Sbjct: 22610 CR*Q*VQS*S*SAI*AI*SVGNAFDEGC*S*VSSPPS*LIRQNIFSC 22470
Score = 41.8 bits (85), Expect(4) = 4e-026
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 114 PLGKAL*EREVRVDLEGRMEHLLAFDNVXPLR 19
PLG *E EV+ DL RMEHLLAF V P+R
Sbjct: 23557 PLGNLW*EIEVKGDLGERMEHLLAFGIVRPIR 23652
Score = 38.2 bits (77), Expect(5) = 1e-062
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3 / -1
Query: 345 EKDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNA 467
++D+ +LM++LTF FGQNVTL+DNA
Sbjct: 22750 QQDTKALMNLLTFKAVEEKVKRRVEKKARIFGQNVTLEDNA 22628
Score = 33.1 bits (66), Expect(5) = 6e-041
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -3 / +3
Query: 466 ALSSKVTFCPNVXXXXXXXXXXXXXXXLNVSISIRELLS 350
ALSSKVTF PN+ LNVS IR L+S
Sbjct: 22629 ALSSKVTF*PNILAFFSTLLFTFSSTALNVSRFIRALVS 22745
>ref|NT_107176.1| Oryza sativa (japonica cultivar-group)
Length = 1593847
Score = 103 bits (219), Expect(5) = 9e-059
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / -1
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
VLH FAS V+VNDAIWKMYF+ELLPLFTVDGDDG+YA+TVALD ACL+V
Sbjct: 1453939 VLHSFASSVSVNDAIWKMYFNELLPLFTVDGDDGNYAETVALDFACLKV 1453793
Score = 94.1 bits (199), Expect(5) = 3e-037
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = -3 / +3
Query: 259 TCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKT 113
T RHAKS+ATV A*LPSSPSTVN+GSNS KYIFHIASFT+T++AK CKT
Sbjct: 1453794 TFRHAKSNATVSA*LPSSPSTVNSGSNSLKYIFHIASFTLTDDAKECKT 1453940
Score = 87.7 bits (185), Expect(5) = 9e-059
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +3 / -1
Query: 471 AGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
AGDSECKV+P+VLSKLYD WVMPLTKDVEVEYLLRRLD*
Sbjct: 1453078 AGDSECKVNPEVLSKLYDLWVMPLTKDVEVEYLLRRLD* 1452962
Score = 71.6 bits (150), Expect(4) = 3e-023
Identities = 31/49 (63%), Positives = 37/49 (75%)
Frame = -2 / +2
Query: 257 LQTR*IQCNCLCIAAIITINSE*REQFIKIHFPYCIIHGDQ*SKRVQDL 111
LQT I CNC CI II+I+SE* +Q ++IH PYCIIH D * KRVQ+L
Sbjct: 1453796 LQTCKI*CNCFCIVTIISIHSE*WKQLVEIHLPYCIIHTD**CKRVQNL 1453942
Score = 67.5 bits (141), Expect(5) = 9e-059
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +3 / -1
Query: 27 AXHYQKPEDVPFFPQDLPSPLFPTKPSPKV 116
A YQKPEDVPFFPQDLPSPLFPTK PKV
Sbjct: 1454113 AGQYQKPEDVPFFPQDLPSPLFPTKDYPKV 1454024
Score = 66.6 bits (139), Expect(4) = 2e-025
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +2 / -3
Query: 113 GLAPFCFIGHRE*CNMENVF**IAPVIHC*W**WQLCTNSCTGFSVSAGS 262
G A FC I E*CNME+VF +A IHC W *W LC NSC F +S G+
Sbjct: 1453940 GFALFCIISQCE*CNMEDVFQRVASTIHCGWR*W*LCRNSCIRFCMSEGT 1453791
Score = 57.9 bits (120), Expect(5) = 9e-059
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3 / -3
Query: 261 LSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LS+RIHIGKYVAEVKFKDA Q+YS LI+ K
Sbjct: 1453586 LSRRIHIGKYVAEVKFKDASQDYSPLIRAK 1453497
Score = 54.7 bits (113), Expect(4) = 2e-025
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +2 / -2
Query: 257 GSITKNSYW*ICC*GEVQRRSSRI*STNKRKG 352
G + KNSYW*ICC*GEVQR R+*STN KG
Sbjct: 1453590 GPVKKNSYW*ICC*GEVQRCFPRL*STNPCKG 1453495
Score = 51.0 bits (105), Expect(5) = 3e-037
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -3 / +3
Query: 115 TFGEGFVGKRGEGRS*GKNGTSSGF**CXAFAL 17
TFG VG RGEGRS GKNGTSSGF C A+ +
Sbjct: 1454025 TFG*SLVGNRGEGRSWGKNGTSSGFWYCPAYQI 1454123
Score = 51.0 bits (105), Expect(5) = 3e-037
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1 / +2
Query: 339 LVDYILEERL*TSPQQHIYQYEFFVIEP 256
LVDY L + L*TSPQQHIYQYEFF+ P
Sbjct: 1453508 LVDYNLGKHL*TSPQQHIYQYEFFLTGP 1453591
Score = 51.0 bits (105), Expect(5) = 3e-037
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -3 / +3
Query: 607 ANRVITDQXXXXXXXXXXXSLVSGITH*SYSLESTLGSTLHSLSPAV 467
A ++ +Q S V GITH SYSL+ST G TLHSLSPA+
Sbjct: 1452942 AENILANQSRRRRRYSTSTSFVKGITHRSYSLDSTSGLTLHSLSPAL 1453082
Score = 47.3 bits (97), Expect(4) = 2e-025
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2 / -3
Query: 26 GXTLSKARRCSILPSRSTLTSLSYKAFPKG 115
G T+ KARRCSIL RS TS+SY+ PKG
Sbjct: 1454114 GRTIPKARRCSILSPRSPFTSISYQRLPKG 1454025
Score = 46.4 bits (95), Expect(4) = 3e-023
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2 / +3
Query: 332 TIFLRSVFELHLSNIFTNMNSL**NLQ 252
TI L S+FELHLSNIFTNMNS * LQ
Sbjct: 1453515 TIILGSIFELHLSNIFTNMNSS*QGLQ 1453595
Score = 44.6 bits (91), Expect(4) = 3e-023
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -1 / +1
Query: 567 DTRLRHPWSVASPTDHTAWRALWDRPCTRCH 475
DT+L+HP S A PTDH A AL D CT CH
Sbjct: 1452982 DTQLQHPSSKALPTDHIA*IALQD*LCTHCH 1453074
Score = 43.7 bits (89), Expect(4) = 2e-025
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +2 / -3
Query: 470 CW*QRVQGRSQSALQAV*SVGDATDQGCRSRVSPAPPRLISDHPISC 610
C *Q VQ S SA+ A+*SVG+A D+GC S VS P LI + SC
Sbjct: 1453079 CR*Q*VQS*S*SAI*AI*SVGNAFDEGC*S*VSSPPS*LIRQNIFSC 1452939
Score = 41.8 bits (85), Expect(4) = 3e-023
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 114 PLGKAL*EREVRVDLEGRMEHLLAFDNVXPLR 19
PLG *E EV+ DL RMEHLLAF V P+R
Sbjct: 1454026 PLGNLW*EIEVKGDLGERMEHLLAFGIVRPIR 1454121
Score = 38.2 bits (77), Expect(5) = 9e-059
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3 / -1
Query: 345 EKDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNA 467
++D+ +LM++LTF FGQNVTL+DNA
Sbjct: 1453219 QQDTKALMNLLTFKAVEEKVKRRVEKKARIFGQNVTLEDNA 1453097
Score = 33.1 bits (66), Expect(5) = 3e-037
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -3 / +3
Query: 466 ALSSKVTFCPNVXXXXXXXXXXXXXXXLNVSISIRELLS 350
ALSSKVTF PN+ LNVS IR L+S
Sbjct: 1453098 ALSSKVTF*PNILAFFSTLLFTFSSTALNVSRFIRALVS 1453214
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 103 bits (219), Expect(5) = 3e-055
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / -1
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
VLH FAS V+VNDAIWKMYF+ELLPLFTVDGDDG+YA+TVALD ACL+V
Sbjct: 4569142 VLHSFASSVSVNDAIWKMYFNELLPLFTVDGDDGNYAETVALDFACLKV 4568996
Score = 94.1 bits (199), Expect(5) = 1e-033
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = -3 / +3
Query: 259 TCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKT 113
T RHAKS+ATV A*LPSSPSTVN+GSNS KYIFHIASFT+T++AK CKT
Sbjct: 4568997 TFRHAKSNATVSA*LPSSPSTVNSGSNSLKYIFHIASFTLTDDAKECKT 4569143
Score = 87.7 bits (185), Expect(5) = 3e-055
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +3 / -1
Query: 471 AGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
AGDSECKV+P+VLSKLYD WVMPLTKDVEVEYLLRRLD*
Sbjct: 4568281 AGDSECKVNPEVLSKLYDLWVMPLTKDVEVEYLLRRLD* 4568165
Score = 67.5 bits (141), Expect(5) = 3e-055
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +3 / -1
Query: 27 AXHYQKPEDVPFFPQDLPSPLFPTKPSPKV 116
A YQKPEDVPFFPQDLPSPLFPTK PKV
Sbjct: 4569316 AGQYQKPEDVPFFPQDLPSPLFPTKDYPKV 4569227
Score = 66.6 bits (139), Expect(4) = 7e-023
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +2 / -3
Query: 113 GLAPFCFIGHRE*CNMENVF**IAPVIHC*W**WQLCTNSCTGFSVSAGS 262
G A FC I E*CNME+VF +A IHC W *W LC NSC F +S G+
Sbjct: 4569143 GFALFCIISQCE*CNMEDVFQRVASTIHCGWR*W*LCRNSCIRFCMSEGT 4568994
Score = 57.9 bits (120), Expect(5) = 3e-055
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3 / -3
Query: 261 LSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LS+RIHIGKYVAEVKFKDA Q+YS LI+ K
Sbjct: 4568789 LSRRIHIGKYVAEVKFKDASQDYSPLIRAK 4568700
Score = 54.7 bits (113), Expect(4) = 7e-023
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +2 / -2
Query: 257 GSITKNSYW*ICC*GEVQRRSSRI*STNKRKG 352
G + KNSYW*ICC*GEVQR R+*STN KG
Sbjct: 4568793 GPVKKNSYW*ICC*GEVQRCFPRL*STNPCKG 4568698
Score = 51.0 bits (105), Expect(5) = 1e-033
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -3 / +3
Query: 115 TFGEGFVGKRGEGRS*GKNGTSSGF**CXAFAL 17
TFG VG RGEGRS GKNGTSSGF C A+ +
Sbjct: 4569228 TFG*SLVGNRGEGRSWGKNGTSSGFWYCPAYQI 4569326
Score = 51.0 bits (105), Expect(5) = 1e-033
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1 / +2
Query: 339 LVDYILEERL*TSPQQHIYQYEFFVIEP 256
LVDY L + L*TSPQQHIYQYEFF+ P
Sbjct: 4568711 LVDYNLGKHL*TSPQQHIYQYEFFLTGP 4568794
Score = 51.0 bits (105), Expect(5) = 1e-033
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -3 / +3
Query: 607 ANRVITDQXXXXXXXXXXXSLVSGITH*SYSLESTLGSTLHSLSPAV 467
A ++ +Q S V GITH SYSL+ST G TLHSLSPA+
Sbjct: 4568145 AENILANQSRRRRRYSTSTSFVKGITHRSYSLDSTSGLTLHSLSPAL 4568285
Score = 47.3 bits (97), Expect(4) = 7e-023
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2 / -3
Query: 26 GXTLSKARRCSILPSRSTLTSLSYKAFPKG 115
G T+ KARRCSIL RS TS+SY+ PKG
Sbjct: 4569317 GRTIPKARRCSILSPRSPFTSISYQRLPKG 4569228
Score = 43.7 bits (89), Expect(4) = 7e-023
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +2 / -3
Query: 470 CW*QRVQGRSQSALQAV*SVGDATDQGCRSRVSPAPPRLISDHPISC 610
C *Q VQ S SA+ A+*SVG+A D+GC S VS P LI + SC
Sbjct: 4568282 CR*Q*VQS*S*SAI*AI*SVGNAFDEGC*S*VSSPPS*LIRQNIFSC 4568142
Score = 38.2 bits (77), Expect(5) = 3e-055
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3 / -1
Query: 345 EKDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNA 467
++D+ +LM++LTF FGQNVTL+DNA
Sbjct: 4568422 QQDTKALMNLLTFKAVEEKVKRRVEKKARIFGQNVTLEDNA 4568300
Score = 33.1 bits (66), Expect(5) = 1e-033
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -3 / +3
Query: 466 ALSSKVTFCPNVXXXXXXXXXXXXXXXLNVSISIRELLS 350
ALSSKVTF PN+ LNVS IR L+S
Sbjct: 4568301 ALSSKVTF*PNILAFFSTLLFTFSSTALNVSRFIRALVS 4568417
>ref|XM_482629.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1043
Score = 159 bits (341), Expect(3) = 7e-053
Identities = 68/126 (53%), Positives = 89/126 (70%)
Frame = +3 / +2
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E+EA+ AKA YQ +++PFFP +P L P L+ A+LV VNDAIW MYF+EL
Sbjct: 329 ESEAVQAKAGRYQSLQEIPFFPFRVPFTLAPPYNFTTELYSAAALVNVNDAIWSMYFNEL 508
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPL +GDDG+YA TV+ DL CLQ LS+RI+ G+YVAEVKF Q Y+ LI+ KD+++
Sbjct: 509 LPLLAKNGDDGNYAATVSSDLVCLQALSRRINYGRYVAEVKFIGDQQNYTTLIRNKDTDA 688
Query: 363 LMDMLT 380
LM +LT
Sbjct: 689 LMKLLT 706
Score = 100 bits (214), Expect(2) = 5e-024
Identities = 57/144 (39%), Positives = 72/144 (50%)
Frame = -3 / -3
Query: 481 LSPAVALSSKVTFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNF 302
L P S VTF PN +V+ IR +S I + + +NF
Sbjct: 807 LLPVSTGPSNVTF*PNTMAFF*TLLFTTSSWASDVNNFIRASVSLLRIKVV*FCWSPMNF 628
Query: 301 TSATYLPI*ILCDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKG 122
TSATYLP IL + CRH +S TV A*LPSSP GSNS KY+ H+ASFT+TN A
Sbjct: 627 TSATYLP*LILLESACRHTRSDETVAA*LPSSPFLARRGSNSLKYMLHMASFTLTNAAAE 448
Query: 121 CKTFGEGFVGKRGEGRS*GKNGTS 50
+ + + G +G GK G S
Sbjct: 447 YSSVVKLYGGANVKGTLKGKKGIS 376
Score = 66.1 bits (138), Expect(3) = 7e-053
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3 / +2
Query: 462 NATAGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
N+ + + KVDP ++ KLYD+WV+PLTK VEVEYLL RLD*
Sbjct: 803 NSNSSQTSFKVDPSLVYKLYDKWVIPLTKQVEVEYLLHRLD* 928
Score = 34.5 bits (69), Expect(2) = 5e-024
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2 / -2
Query: 587 SVEAAQEILDFDILGQWHHPLIIQ 516
S++ +++LD + QW+HP +IQ
Sbjct: 928 SIKTMEQVLDLHLFSQWNHPFVIQ 857
Score = 25.4 bits (49), Expect(3) = 7e-053
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 435 FGQNVTLDDNATAGDS 482
FGQNVTLD G+S
Sbjct: 761 FGQNVTLDGPVETGNS 808
>dbj|AK069725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027D10, full
insert sequence
Length = 1043
Score = 156 bits (336), Expect(3) = 4e-052
Identities = 67/126 (53%), Positives = 89/126 (70%)
Frame = +3 / +2
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E+EA+ AKA YQ +++PFFP +P L P L+ A+LV VNDAIW MYF+EL
Sbjct: 329 ESEAVQAKAGRYQSLQEIPFFPFRVPFTLAPPYNFTTELYSAAALVNVNDAIWSMYFNEL 508
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPL +G+DG+YA TV+ DL CLQ LS+RI+ G+YVAEVKF Q Y+ LI+ KD+++
Sbjct: 509 LPLLAKNGNDGNYAATVSSDLVCLQALSRRINYGRYVAEVKFIGDQQNYTTLIRNKDTDA 688
Query: 363 LMDMLT 380
LM +LT
Sbjct: 689 LMKLLT 706
Score = 98.2 bits (208), Expect(2) = 3e-023
Identities = 56/144 (38%), Positives = 71/144 (49%)
Frame = -3 / -3
Query: 481 LSPAVALSSKVTFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNF 302
L P S VTF PN +V+ IR +S I + + +NF
Sbjct: 807 LLPVSTGPSNVTF*PNTMAFF*TLLFTTSSWASDVNNFIRASVSLLRIKVV*FCWSPMNF 628
Query: 301 TSATYLPI*ILCDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKG 122
TSATYLP IL + CRH +S TV A*LPS P GSNS KY+ H+ASFT+TN A
Sbjct: 627 TSATYLP*LILLESACRHTRSDETVAA*LPSLPFLARRGSNSLKYMLHMASFTLTNAAAE 448
Query: 121 CKTFGEGFVGKRGEGRS*GKNGTS 50
+ + + G +G GK G S
Sbjct: 447 YSSVVKLYGGANVKGTLKGKKGIS 376
Score = 66.1 bits (138), Expect(3) = 4e-052
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3 / +2
Query: 462 NATAGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
N+ + + KVDP ++ KLYD+WV+PLTK VEVEYLL RLD*
Sbjct: 803 NSNSSQTSFKVDPSLVYKLYDKWVIPLTKQVEVEYLLHRLD* 928
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2 / -2
Query: 587 SVEAAQEILDFDILGQWHHPLIIQ 516
S++ +++LD + QW+HP +IQ
Sbjct: 928 SIKTMEQVLDLHLFSQWNHPFVIQ 857
Score = 25.4 bits (49), Expect(3) = 4e-052
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 435 FGQNVTLDDNATAGDS 482
FGQNVTLD G+S
Sbjct: 761 FGQNVTLDGPVETGNS 808
>dbj|AK068983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001N13, full
insert sequence
Length = 1250
Score = 208 bits (449), Expect = 6e-052
Identities = 86/195 (44%), Positives = 115/195 (58%)
Frame = +3 / +1
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E L+ + Y+ P++ PFFP+DLP PL P PKVLHP A + +N IWKMYFDEL
Sbjct: 448 ETEKLHQQVGRYKSPDEHPFFPEDLPEPLLPPLQYPKVLHPIADSININKEIWKMYFDEL 627
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LP +G DG+Y + D CLQ LS+RIH GK+VAE KF+++P+ Y I +D +
Sbjct: 628 LPRLVKEGSDGNYGSSALCDTICLQALSKRIHYGKFVAEAKFQESPEAYMPAIIAQDCDQ 807
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQWVMPL 542
LM +LT+ FGQ V L K+ P ++++LY +MPL
Sbjct: 808 LMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSYRIMPL 987
Query: 543 TKDVEVEYLLRRLD* 587
TK+V+V YLLRRLD*
Sbjct: 988 TKEVQVAYLLRRLD* 1032
>ref|NM_191361.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 885
Score = 208 bits (449), Expect = 6e-052
Identities = 86/195 (44%), Positives = 115/195 (58%)
Frame = +3 / +1
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E L+ + Y+ P++ PFFP+DLP PL P PKVLHP A + +N IWKMYFDEL
Sbjct: 301 ETEKLHQQVGRYKSPDEHPFFPEDLPEPLLPPLQYPKVLHPIADSININKEIWKMYFDEL 480
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LP +G DG+Y + D CLQ LS+RIH GK+VAE KF+++P+ Y I +D +
Sbjct: 481 LPRLVKEGSDGNYGSSALCDTICLQALSKRIHYGKFVAEAKFQESPEAYMPAIIAQDCDQ 660
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQWVMPL 542
LM +LT+ FGQ V L K+ P ++++LY +MPL
Sbjct: 661 LMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSYRIMPL 840
Query: 543 TKDVEVEYLLRRLD* 587
TK+V+V YLLRRLD*
Sbjct: 841 TKEVQVAYLLRRLD* 885
>dbj|AK105512.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-E07, full
insert sequence
Length = 1348
Score = 142 bits (305), Expect(2) = 1e-043
Identities = 60/152 (39%), Positives = 87/152 (57%)
Frame = +3 / +3
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
+ E ++A+ Y+ P++ PFFP++L + P+ VLHP A+ + +N IW +YF +L
Sbjct: 486 KTEKMHARMGRYKSPDEHPFFPENLLEVVEPSVEYENVLHPAAANININKRIWDVYFGDL 665
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LP +G DG+ + D+ LQ LS+RIH GKYVAE KF+ AP Y+ I KDS+
Sbjct: 666 LPRLVKEGSDGNCGSSACWDMLILQALSKRIHYGKYVAEAKFQGAPDTYTPAILNKDSDK 845
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLD 458
LM++LTF TFGQ V+ D
Sbjct: 846 LMELLTFAKVEDDVRARVMSKAMTFGQVVSED 941
Score = 83.1 bits (175), Expect(2) = 3e-021
Identities = 51/138 (36%), Positives = 60/138 (43%)
Frame = -3 / -1
Query: 457 SKVTFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATYLPI 278
S +T P V NVS SI LS I+ +Y GA N SATYLP
Sbjct: 940 SSLTTWPKVMALLITRALTSSSTFANVSNSISLSLSLFKIAGVYVSGAPWNLASATYLP* 761
Query: 277 *ILCDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFGEGF 98
*IL + CR S + LPS PS + G S KY I F + A GC+TF
Sbjct: 760 *ILLESACRINMSQHALDPQLPSLPSFTSLGRRSPKYTSQILLFMLMLAAAGCRTFSYST 581
Query: 97 VGKRGEGRS*GKNGTSSG 44
G + GK G SSG
Sbjct: 580 DGSTTSSKFSGKKGCSSG 527
Score = 58.8 bits (122), Expect(2) = 1e-043
Identities = 20/33 (60%), Positives = 31/33 (93%)
Frame = +3 / +3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K++P++ +LYD+W+MPLTK+V+V+YLL+RLD*
Sbjct: 963 KIEPELAVELYDKWIMPLTKEVQVQYLLKRLD* 1061
Score = 43.2 bits (88), Expect(2) = 3e-021
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -2 / -3
Query: 587 SVEAAQEILDFDILGQWHHPLIIQLGEHFGIDLAL 483
S++ +E+L LGQWH PL+IQL +DL L
Sbjct: 1061 SIQPLEEVLHLHFLGQWHDPLVIQLHGQLRLDLEL 957
>gb|AQ915527.1|AQ915527 nbeb0058D18f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0058D18f, DNA sequence
Length = 802
Score = 101 bits (216), Expect(2) = 4e-034
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +3 / -2
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQ 257
VLH FAS V+VNDAIWKMYF+ELLPLFTVDGDDG+YA+TVALD ACL+
Sbjct: 396 VLHSFASSVSVNDAIWKMYFNELLPLFTVDGDDGNYAETVALDFACLE 253
Score = 92.7 bits (196), Expect(2) = 2e-026
Identities = 39/47 (82%), Positives = 44/47 (93%)
Frame = -3 / +2
Query: 253 RHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKT 113
RHAKS+ATV A*LPSSPSTVN+GSNS KYIFHIASFT+T++AK CKT
Sbjct: 257 RHAKSNATVSA*LPSSPSTVNSGSNSLKYIFHIASFTLTDDAKECKT 397
Score = 67.5 bits (141), Expect(2) = 4e-034
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +3 / -2
Query: 27 AXHYQKPEDVPFFPQDLPSPLFPTKPSPKV 116
A YQKPEDVPFFPQDLPSPLFPTK PKV
Sbjct: 570 AGQYQKPEDVPFFPQDLPSPLFPTKDYPKV 481
Score = 51.0 bits (105), Expect(2) = 2e-026
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -3 / +2
Query: 115 TFGEGFVGKRGEGRS*GKNGTSSGF**CXAFAL 17
TFG VG RGEGRS GKNGTSSGF C A+ +
Sbjct: 482 TFG*SLVGNRGEGRSWGKNGTSSGFWYCPAYQI 580
>gb|AACV01018569.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018569, whole
genome shotgun sequence
Length = 14799
Score = 79.9 bits (168), Expect(4) = 4e-031
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = +3 / -2
Query: 117 LHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
L+ A+LV VNDAIW MYF+ELLPL +GDDG+YA TV+ DL CLQV
Sbjct: 10385 LYSAAALVNVNDAIWSMYFNELLPLLAKNGDDGNYAATVSSDLVCLQV 10242
Score = 66.1 bits (138), Expect(4) = 4e-031
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3 / -3
Query: 462 NATAGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
N+ + + KVDP ++ KLYD+WV+PLTK VEVEYLL RLD*
Sbjct: 9811 NSNSSQTSFKVDPSLVYKLYDKWVIPLTKQVEVEYLLHRLD* 9686
Score = 40.0 bits (81), Expect(4) = 4e-031
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3 / -3
Query: 261 LSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LS+RI+ G+YVAEVKF Q Y+ LI+ K
Sbjct: 10153 LSRRINYGRYVAEVKFIGDQQNYTTLIRNK 10064
Score = 25.4 bits (49), Expect(4) = 4e-031
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3 / -3
Query: 435 FGQNVTLDDNATAGDS 482
FGQNVTLD G+S
Sbjct: 9853 FGQNVTLDGPVETGNS 9806
>gb|AACV01002400.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002400, whole
genome shotgun sequence
Length = 23210
Score = 72.5 bits (152), Expect(3) = 6e-029
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +3 / +2
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVL 263
VLHP A + +N IWKMYFDELLP +G DG+Y + D CLQVL
Sbjct: 1637 VLHPIADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQVL 1786
Score = 62.0 bits (129), Expect(3) = 6e-029
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +3 / +2
Query: 348 KDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQ 527
+D + LM +LT+ FGQ V L K+ P ++++LY
Sbjct: 2306 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 2485
Query: 528 WVMPLTKDVEVEYLLRRLD* 587
+MPLTK+V+V YLLRRLD*
Sbjct: 2486 RIMPLTKEVQVAYLLRRLD* 2545
Score = 48.7 bits (100), Expect(3) = 6e-029
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3 / +1
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASL 137
Y+ P++ PFFP+DLP PL P PKV+H L
Sbjct: 1093 YKSPDEHPFFPEDLPEPLLPPLQYPKVMHKLVFL 1194
>dbj|AP003890.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone OJ1244_D07,
*** SEQUENCING IN PROGRESS ***
Length = 104295
Score = 79.9 bits (168), Expect(3) = 2e-028
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = +3 / +3
Query: 117 LHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
L+ A+LV VNDAIW MYF+ELLPL +GDDG+YA TV+ DL CLQV
Sbjct: 21792 LYSAAALVNVNDAIWSMYFNELLPLLAKNGDDGNYAATVSSDLVCLQV 21935
Score = 66.1 bits (138), Expect(3) = 2e-028
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3 / +1
Query: 462 NATAGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
N+ + + KVDP ++ KLYD+WV+PLTK VEVEYLL RLD*
Sbjct: 22366 NSNSSQTSFKVDPSLVYKLYDKWVIPLTKQVEVEYLLHRLD* 22491
Score = 40.0 bits (81), Expect(3) = 2e-028
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3 / +1
Query: 261 LSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LS+RI+ G+YVAEVKF Q Y+ LI+ K
Sbjct: 22024 LSRRINYGRYVAEVKFIGDQQNYTTLIRNK 22113
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0528B09
Length = 156897
Score = 79.9 bits (168), Expect(3) = 4e-028
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = +3 / +2
Query: 117 LHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
L+ A+LV VNDAIW MYF+ELLPL +GDDG+YA TV+ DL CLQV
Sbjct: 121703 LYSAAALVNVNDAIWSMYFNELLPLLAKNGDDGNYAATVSSDLVCLQV 121846
Score = 66.1 bits (138), Expect(3) = 4e-028
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3 / +3
Query: 462 NATAGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
N+ + + KVDP ++ KLYD+WV+PLTK VEVEYLL RLD*
Sbjct: 122277 NSNSSQTSFKVDPSLVYKLYDKWVIPLTKQVEVEYLLHRLD* 122402
Score = 40.0 bits (81), Expect(3) = 4e-028
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3 / +3
Query: 261 LSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LS+RI+ G+YVAEVKF Q Y+ LI+ K
Sbjct: 121935 LSRRINYGRYVAEVKFIGDQQNYTTLIRNK 122024
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0403C05
Length = 151085
Score = 72.5 bits (152), Expect(3) = 2e-027
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +3 / -1
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVL 263
VLHP A + +N IWKMYFDELLP +G DG+Y + D CLQVL
Sbjct: 36971 VLHPIADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQVL 36822
Score = 62.0 bits (129), Expect(3) = 2e-027
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +3 / -1
Query: 348 KDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQ 527
+D + LM +LT+ FGQ V L K+ P ++++LY
Sbjct: 36302 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 36123
Query: 528 WVMPLTKDVEVEYLLRRLD* 587
+MPLTK+V+V YLLRRLD*
Sbjct: 36122 RIMPLTKEVQVAYLLRRLD* 36063
Score = 48.7 bits (100), Expect(3) = 2e-027
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3 / -3
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASL 137
Y+ P++ PFFP+DLP PL P PKV+H L
Sbjct: 37515 YKSPDEHPFFPEDLPEPLLPPLQYPKVMHKLVFL 37414
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 72.5 bits (152), Expect(4) = 4e-024
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +3 / -2
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVL 263
VLHP A + +N IWKMYFDELLP +G DG+Y + D CLQVL
Sbjct: 6694271 VLHPIADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQVL 6694122
Score = 62.0 bits (129), Expect(4) = 4e-024
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +3 / -2
Query: 348 KDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQ 527
+D + LM +LT+ FGQ V L K+ P ++++LY
Sbjct: 6693602 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 6693423
Query: 528 WVMPLTKDVEVEYLLRRLD* 587
+MPLTK+V+V YLLRRLD*
Sbjct: 6693422 RIMPLTKEVQVAYLLRRLD* 6693363
Score = 48.7 bits (100), Expect(4) = 4e-024
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3 / -1
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASL 137
Y+ P++ PFFP+DLP PL P PKV+H L
Sbjct: 6694815 YKSPDEHPFFPEDLPEPLLPPLQYPKVMHKLVFL 6694714
Score = 33.6 bits (67), Expect(4) = 4e-024
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2 / -3
Query: 578 PRLISDHPISCSCELYVRVGFSLLCTCPLWL 670
PR + HPI +C + + + + LCTCPL L
Sbjct: 4108207 PRSAARHPILFACTIAISLDGTGLCTCPLSL 4108115
>gb|CV728275.1|CV728275 14Salt--06-O10.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--06-O10, mRNA sequence
Length = 488
Score = 66.1 bits (138), Expect(3) = 7e-024
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3 / -1
Query: 462 NATAGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
N+ + + KVDP ++ KLYD+WV+PLTK VEVEYLL RLD*
Sbjct: 257 NSNSSQTSFKVDPSLVYKLYDKWVIPLTKQVEVEYLLHRLD* 132
Score = 61.1 bits (127), Expect(3) = 7e-024
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3 / -1
Query: 249 CLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLMDMLT 380
CLQ LS+RI+ G+YVAEVKF Q Y+ LI+ KD+++LM +LT
Sbjct: 485 CLQALSRRINYGRYVAEVKFIGDQQNYTTLIRNKDTDALMKLLT 354
Score = 25.4 bits (49), Expect(3) = 7e-024
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3 / -1
Query: 435 FGQNVTLDDNATAGDS 482
FGQNVTLD G+S
Sbjct: 299 FGQNVTLDGPVETGNS 252
>gb|CA754252.1|CA754252 BR040012000_PLATE_H10_80_091.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR040012000_PLATE_H10_80_091.ab1 similar to putative
chorismate mutase precursor [Oryza sativa, mRNA sequence
Length = 653
Score = 114 bits (244), Expect = 1e-023
Identities = 43/88 (48%), Positives = 53/88 (60%)
Frame = +3 / +2
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E L+ + Y+ P++ PFFP+DLP PL P PKVLHP A + +N IW MYFDEL
Sbjct: 389 ETEXLHQQVGRYKSPDEHPFFPEDLPEPLLPPLQYPKVLHPIADSININXEIWXMYFDEL 568
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLS 266
LP +G DG Y + D CLQ LS
Sbjct: 569 LPRLVKEGSDGXYGSSALCDTICLQALS 652
>gb|AACV01025341.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025341, whole
genome shotgun sequence
Length = 39984
Score = 58.8 bits (122), Expect(4) = 2e-023
Identities = 20/33 (60%), Positives = 31/33 (93%)
Frame = +3 / +3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K++P++ +LYD+W+MPLTK+V+V+YLL+RLD*
Sbjct: 6852 KIEPELAVELYDKWIMPLTKEVQVQYLLKRLD* 6950
Score = 54.7 bits (113), Expect(4) = 2e-023
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3 / +1
Query: 111 KVLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVL 263
+VLHP A+ + +N IW +YF +LLP +G DG+ + D+ LQV+
Sbjct: 5962 QVLHPAAANININKRIWDVYFGDLLPRLVKEGSDGNCGSSACWDMLILQVI 6114
Score = 47.8 bits (98), Expect(4) = 2e-023
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +3 / +3
Query: 252 LQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LQ LS+RIH GKYVAE KF+ AP Y+ I K
Sbjct: 6408 LQALSKRIHYGKYVAEAKFQGAPDTYTPAILNK 6506
Score = 28.1 bits (55), Expect(4) = 2e-023
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3 / +3
Query: 348 KDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLD 458
+DS+ LM++LTF TFGQ V+ D
Sbjct: 6720 QDSDKLMELLTFAKVEDDVRARVMSKAMTFGQVVSED 6830
>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 144767
Score = 58.8 bits (122), Expect(4) = 7e-022
Identities = 20/33 (60%), Positives = 31/33 (93%)
Frame = +3 / -3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K++P++ +LYD+W+MPLTK+V+V+YLL+RLD*
Sbjct: 16575 KIEPELAVELYDKWIMPLTKEVQVQYLLKRLD* 16477
Score = 54.7 bits (113), Expect(4) = 7e-022
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3 / -1
Query: 111 KVLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVL 263
+VLHP A+ + +N IW +YF +LLP +G DG+ + D+ LQV+
Sbjct: 17465 QVLHPAAANININKRIWDVYFGDLLPRLVKEGSDGNCGSSACWDMLILQVI 17313
Score = 47.8 bits (98), Expect(4) = 7e-022
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +3 / -3
Query: 252 LQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LQ LS+RIH GKYVAE KF+ AP Y+ I K
Sbjct: 17019 LQALSKRIHYGKYVAEAKFQGAPDTYTPAILNK 16921
Score = 28.1 bits (55), Expect(4) = 7e-022
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3 / -3
Query: 348 KDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLD 458
+DS+ LM++LTF TFGQ V+ D
Sbjct: 16707 QDSDKLMELLTFAKVEDDVRARVMSKAMTFGQVVSED 16597
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 176388
Score = 58.8 bits (122), Expect(4) = 1e-021
Identities = 20/33 (60%), Positives = 31/33 (93%)
Frame = +3 / -2
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K++P++ +LYD+W+MPLTK+V+V+YLL+RLD*
Sbjct: 130790 KIEPELAVELYDKWIMPLTKEVQVQYLLKRLD* 130692
Score = 54.7 bits (113), Expect(4) = 1e-021
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3 / -3
Query: 111 KVLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVL 263
+VLHP A+ + +N IW +YF +LLP +G DG+ + D+ LQV+
Sbjct: 131680 QVLHPAAANININKRIWDVYFGDLLPRLVKEGSDGNCGSSACWDMLILQVI 131528
Score = 47.8 bits (98), Expect(4) = 1e-021
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +3 / -2
Query: 252 LQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LQ LS+RIH GKYVAE KF+ AP Y+ I K
Sbjct: 131234 LQALSKRIHYGKYVAEAKFQGAPDTYTPAILNK 131136
Score = 28.1 bits (55), Expect(4) = 1e-021
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3 / -2
Query: 348 KDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLD 458
+DS+ LM++LTF TFGQ V+ D
Sbjct: 130922 QDSDKLMELLTFAKVEDDVRARVMSKAMTFGQVVSED 130812
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,611,127,731
Number of Sequences: 438736
Number of extensions: 87254914
Number of successful extensions: 417385
Number of sequences better than 1.0e-020: 27
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 197854158058
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)