TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969912.2.1
(507 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_470116.1| Oryza sativa (japonica cultivar-group), mRNA 228 7e-074
dbj|AK058641.1| Oryza sativa (japonica cultivar-group) cDNA... 228 5e-073
gb|AACV01008169.1| Oryza sativa (japonica cultivar-group) c... 146 5e-055
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 146 2e-054
gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 ... 146 2e-054
gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 gen... 146 2e-054
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 146 3e-053
gb|D15747.1|D15747 RICC1183A Rice callus Oryza sativa (japo... 123 5e-036
dbj|AK062138.1| Oryza sativa (japonica cultivar-group) cDNA... 122 3e-034
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 146 2e-033
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 146 2e-033
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 146 2e-033
dbj|AK068648.1| Oryza sativa (japonica cultivar-group) cDNA... 105 3e-030
gb|CB678909.1|CB678909 OSJNEf01L21.f OSJNEf Oryza sativa (j... 90 3e-029
dbj|AK106439.1| Oryza sativa (japonica cultivar-group) cDNA... 61 2e-028
ref|XM_481219.1| Oryza sativa (japonica cultivar-group), mRNA 61 2e-028
dbj|AK105802.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-027
ref|XM_482628.1| Oryza sativa (japonica cultivar-group), mRNA 105 2e-027
dbj|AK105870.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-027
ref|XM_507587.1| PREDICTED Oryza sativa (japonica cultivar-... 105 2e-027
dbj|AK072872.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-027
ref|XM_507244.2| PREDICTED Oryza sativa (japonica cultivar-... 105 2e-027
ref|NM_189520.1| Oryza sativa (japonica cultivar-group), p... 108 3e-027
dbj|AK062411.1| Oryza sativa (japonica cultivar-group) cDNA... 108 4e-027
gb|AACV01017860.1| Oryza sativa (japonica cultivar-group) c... 61 2e-026
gb|CB660333.1|CB660333 OSJNEd01P10.f OSJNEd Oryza sativa (j... 97 1e-025
gb|CB679593.1|CB679593 OSJNEf03E14.f OSJNEf Oryza sativa (j... 97 1e-025
dbj|AP007260.2| Oryza sativa (japonica cultivar-group) geno... 108 1e-025
ref|NM_190422.1| Oryza sativa (japonica cultivar-group), p... 78 1e-025
dbj|AK102436.1| Oryza sativa (japonica cultivar-group) cDNA... 69 2e-025
gb|CB647560.1|CB647560 OSJNEb10I16.f OSJNEb Oryza sativa (j... 69 2e-025
gb|CA758807.1|CA758807 BR030025000_PLATE_E11_85_086.ab1 OA ... 69 2e-025
dbj|AK104860.1| Oryza sativa (japonica cultivar-group) cDNA... 97 2e-025
dbj|AK107198.1| Oryza sativa (japonica cultivar-group) cDNA... 97 2e-025
dbj|AK067949.1| Oryza sativa (japonica cultivar-group) cDNA... 97 2e-025
dbj|AP004655.2| Oryza sativa (japonica cultivar-group) chro... 61 2e-025
dbj|AP005415.2| Oryza sativa (japonica cultivar-group) geno... 61 2e-025
dbj|AP003228.3| Oryza sativa (japonica cultivar-group) geno... 108 5e-025
dbj|AK107469.1| Oryza sativa (japonica cultivar-group) cDNA... 76 3e-024
dbj|AK102061.1| Oryza sativa (japonica cultivar-group) cDNA... 81 5e-024
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 108 8e-024
dbj|AK100234.1| Oryza sativa (japonica cultivar-group) cDNA... 72 2e-023
ref|XM_450149.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-023
ref|NM_193168.1| Oryza sativa (japonica cultivar-group), p... 74 2e-023
dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-023
dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-023
gb|CB645627.1|CB645627 OSJNEb07H08.f OSJNEb Oryza sativa (j... 74 2e-023
dbj|AK099770.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-023
gb|BP184676.1|BP184676 BP184676 pNS rice panicle cDNA, germ... 60 3e-023
dbj|AB110186.1| Oryza sativa (japonica cultivar-group) mRNA... 60 3e-023
ref|NM_187716.1| Oryza sativa (japonica cultivar-group), p... 66 3e-023
gb|AACV01019998.1| Oryza sativa (japonica cultivar-group) c... 79 2e-022
gb|AACV01018568.1| Oryza sativa (japonica cultivar-group) c... 81 2e-022
gb|AACV01003141.1| Oryza sativa (japonica cultivar-group) c... 75 4e-022
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 108 5e-022
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 108 5e-022
dbj|AB122055.1| Oryza sativa (japonica cultivar-group) CCR ... 97 5e-022
dbj|AK107149.1| Oryza sativa (japonica cultivar-group) cDNA... 68 7e-022
ref|NM_187717.1| Oryza sativa (japonica cultivar-group), p... 68 7e-022
dbj|AK064401.1| Oryza sativa (japonica cultivar-group) cDNA... 59 8e-021
ref|XM_468316.1| Oryza sativa (japonica cultivar-group), mRNA 59 8e-021
dbj|AP005426.3| Oryza sativa (japonica cultivar-group) geno... 79 1e-020
>ref|XM_470116.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1005
Score = 228 bits (493), Expect(2) = 7e-074
Identities = 94/131 (71%), Positives = 98/131 (74%)
Frame = +3 / +1
Query: 114 HXXXXXXXXXXXRLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPA 293
H RL F RGCSGVFHLASPC VD V DPQ QLMVPA
Sbjct: 163 HALAAAGGGEGRRLRVFPGDLLDGAALLAAARGCSGVFHLASPCIVDRVLDPQAQLMVPA 342
Query: 294 VEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYP 473
VEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYCEKNGVWYP
Sbjct: 343 VEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYCEKNGVWYP 522
Query: 474 ASKTLAEKAAW 506
ASKTLAEKAAW
Sbjct: 523 ASKTLAEKAAW 555
Score = 164 bits (353), Expect(2) = 1e-040
Identities = 71/97 (73%), Positives = 75/97 (77%)
Frame = -3 / -2
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
HAAFSA+V EAGYQTPFF SPAG PGLGT AEMDEVTTTRRTPPASL
Sbjct: 554 HAAFSANVFEAGYQTPFFSQ*SRSVQQRSSRTSPAGQPGLGTMAEMDEVTTTRRTPPASL 375
Query: 325 XARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPE 215
AR+TFSVPSTAGTIS WGS T ST+QG+ARWKTPE
Sbjct: 374 AARSTFSVPSTAGTISCAWGSRTRSTMQGEARWKTPE 264
Score = 72.5 bits (152), Expect(2) = 7e-074
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS LVR LL RGY+V A VL+PDD+AETDH
Sbjct: 46 VTGASGFIGSCLVRRLLARGYSVHAAVLNPDDKAETDH 159
Score = 27.2 bits (53), Expect(2) = 1e-040
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 74 EPMKPLAPVT 45
>dbj|AK058641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E01, full
insert sequence
Length = 1248
Score = 228 bits (493), Expect(2) = 5e-073
Identities = 94/131 (71%), Positives = 98/131 (74%)
Frame = +3 / +1
Query: 114 HXXXXXXXXXXXRLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPA 293
H RL F RGCSGVFHLASPC VD V DPQ QLMVPA
Sbjct: 220 HALAAAGGGEGRRLRVFPGDLLDGAALLAAARGCSGVFHLASPCIVDRVLDPQAQLMVPA 399
Query: 294 VEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYP 473
VEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYCEKNGVWYP
Sbjct: 400 VEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYCEKNGVWYP 579
Query: 474 ASKTLAEKAAW 506
ASKTLAEKAAW
Sbjct: 580 ASKTLAEKAAW 612
Score = 164 bits (353), Expect(2) = 2e-040
Identities = 71/97 (73%), Positives = 75/97 (77%)
Frame = -3 / -2
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
HAAFSA+V EAGYQTPFF SPAG PGLGT AEMDEVTTTRRTPPASL
Sbjct: 611 HAAFSANVFEAGYQTPFFSQ*SRSVQQRSSRTSPAGQPGLGTMAEMDEVTTTRRTPPASL 432
Query: 325 XARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPE 215
AR+TFSVPSTAGTIS WGS T ST+QG+ARWKTPE
Sbjct: 431 AARSTFSVPSTAGTISCAWGSRTRSTMQGEARWKTPE 321
Score = 69.8 bits (146), Expect(2) = 5e-073
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS LVR LL RGY+V A VL+PDD AETDH
Sbjct: 103 VTGASGFIGSCLVRRLLARGYSVHAAVLNPDD*AETDH 216
Score = 27.2 bits (53), Expect(2) = 2e-040
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 131 EPMKPLAPVT 102
>gb|AACV01008169.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008169, whole
genome shotgun sequence
Length = 30261
Score = 146 bits (313), Expect(4) = 5e-055
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3 / -2
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q QLMVPAVEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYC
Sbjct: 13862 QAQLMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYC 13683
Query: 450 EKNGV 464
EKNGV
Sbjct: 13682 EKNGV 13668
Score = 99.1 bits (210), Expect(4) = 8e-029
Identities = 44/62 (70%), Positives = 45/62 (72%)
Frame = -3 / +1
Query: 463 TPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASLXARTTFSVPSTAGT 284
TPFF SPAG PGLGT AEMDEVTTTRRTPPASL AR+TFSVPSTAGT
Sbjct: 13669 TPFFSQ*SRSVQQRSSRTSPAGQPGLGTMAEMDEVTTTRRTPPASLAARSTFSVPSTAGT 13848
Query: 283 IS 278
IS
Sbjct: 13849 IS 13854
Score = 53.3 bits (110), Expect(4) = 5e-055
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / -1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGASGFIGS LVR LL RGY+V A VL+P
Sbjct: 14328 VTGASGFIGSCLVRRLLARGYSVHAAVLNP 14239
Score = 51.0 bits (105), Expect(4) = 5e-055
Identities = 23/53 (43%), Positives = 23/53 (43%)
Frame = +3 / -3
Query: 114 HXXXXXXXXXXXRLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQ 272
H RL F RGCSGVFHLASPC VD V DPQ
Sbjct: 14128 HALAAARGGEGRRLRVFPGDLLDGAALLAAARGCSGVFHLASPCIVDRVLDPQ 13970
Score = 42.8 bits (87), Expect(4) = 8e-029
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3 / +3
Query: 271 WGSLTGSTVQGDARWKTPE 215
WGS T ST+QG+ARWKTPE
Sbjct: 13971 WGSRTRSTMQGEARWKTPE 14027
Score = 41.4 bits (84), Expect(4) = 5e-055
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3 / -3
Query: 462 VWYPASKTLAEKAAW 506
VWYPASKTLAEKAAW
Sbjct: 12994 VWYPASKTLAEKAAW 12950
Score = 33.6 bits (67), Expect(4) = 8e-029
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / +3
Query: 505 HAAFSASVLEAGYQT 461
HAAFSA+V EAGYQT
Sbjct: 12951 HAAFSANVFEAGYQT 12995
Score = 27.2 bits (53), Expect(4) = 8e-029
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / +2
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 14300 EPMKPLAPVT 14329
>ref|NT_107188.1| Oryza sativa (japonica cultivar-group)
Length = 1363716
Score = 146 bits (313), Expect(4) = 2e-054
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3 / +1
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q QLMVPAVEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYC
Sbjct: 693376 QAQLMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYC 693555
Query: 450 EKNGV 464
EKNGV
Sbjct: 693556 EKNGV 693570
Score = 99.1 bits (210), Expect(2) = 3e-026
Identities = 44/62 (70%), Positives = 45/62 (72%)
Frame = -3 / -2
Query: 463 TPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASLXARTTFSVPSTAGT 284
TPFF SPAG PGLGT AEMDEVTTTRRTPPASL AR+TFSVPSTAGT
Sbjct: 693569 TPFFSQ*SRSVQQRSSRTSPAGQPGLGTMAEMDEVTTTRRTPPASLAARSTFSVPSTAGT 693390
Query: 283 IS 278
IS
Sbjct: 693389 IS 693384
Score = 53.3 bits (110), Expect(4) = 2e-054
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGASGFIGS LVR LL RGY+V A VL+P
Sbjct: 692910 VTGASGFIGSCLVRRLLARGYSVHAAVLNP 692999
Score = 51.0 bits (105), Expect(4) = 2e-054
Identities = 23/53 (43%), Positives = 23/53 (43%)
Frame = +3 / +2
Query: 114 HXXXXXXXXXXXRLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQ 272
H RL F RGCSGVFHLASPC VD V DPQ
Sbjct: 693110 HALAAAGGGEGRRLRVFPGDLLDGAALLAAARGCSGVFHLASPCIVDRVLDPQ 693268
Score = 42.8 bits (87), Expect(2) = 3e-026
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 271 WGSLTGSTVQGDARWKTPE 215
WGS T ST+QG+ARWKTPE
Sbjct: 693267 WGSRTRSTMQGEARWKTPE 693211
Score = 22.1 bits (42), Expect(4) = 2e-054
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 93 DDRAETDH 116
DD+AETDH
Sbjct: 693083 DDKAETDH 693106
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete
sequence
Length = 172337
Score = 146 bits (313), Expect(4) = 2e-054
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3 / -2
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q QLMVPAVEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYC
Sbjct: 20722 QAQLMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYC 20543
Query: 450 EKNGV 464
EKNGV
Sbjct: 20542 EKNGV 20528
Score = 99.1 bits (210), Expect(4) = 1e-026
Identities = 44/62 (70%), Positives = 45/62 (72%)
Frame = -3 / +3
Query: 463 TPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASLXARTTFSVPSTAGT 284
TPFF SPAG PGLGT AEMDEVTTTRRTPPASL AR+TFSVPSTAGT
Sbjct: 20529 TPFFSQ*SRSVQQRSSRTSPAGQPGLGTMAEMDEVTTTRRTPPASLAARSTFSVPSTAGT 20708
Query: 283 IS 278
IS
Sbjct: 20709 IS 20714
Score = 53.3 bits (110), Expect(4) = 2e-054
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / -1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGASGFIGS LVR LL RGY+V A VL+P
Sbjct: 21188 VTGASGFIGSCLVRRLLARGYSVHAAVLNP 21099
Score = 51.0 bits (105), Expect(4) = 2e-054
Identities = 23/53 (43%), Positives = 23/53 (43%)
Frame = +3 / -3
Query: 114 HXXXXXXXXXXXRLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQ 272
H RL F RGCSGVFHLASPC VD V DPQ
Sbjct: 20988 HALAAAGGGEGRRLRVFPGDLLDGAALLAAARGCSGVFHLASPCIVDRVLDPQ 20830
Score = 42.8 bits (87), Expect(4) = 1e-026
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3 / +2
Query: 271 WGSLTGSTVQGDARWKTPE 215
WGS T ST+QG+ARWKTPE
Sbjct: 20831 WGSRTRSTMQGEARWKTPE 20887
Score = 33.6 bits (67), Expect(4) = 1e-026
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / +2
Query: 505 HAAFSASVLEAGYQT 461
HAAFSA+V EAGYQT
Sbjct: 19811 HAAFSANVFEAGYQT 19855
Score = 27.2 bits (53), Expect(4) = 1e-026
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 21160 EPMKPLAPVT 21189
Score = 22.1 bits (42), Expect(4) = 2e-054
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 93 DDRAETDH 116
DD+AETDH
Sbjct: 21015 DDKAETDH 20992
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
sequence
Length = 163828
Score = 146 bits (313), Expect(4) = 2e-054
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3 / +1
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q QLMVPAVEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYC
Sbjct: 781 QAQLMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYC 960
Query: 450 EKNGV 464
EKNGV
Sbjct: 961 EKNGV 975
Score = 99.1 bits (210), Expect(4) = 1e-026
Identities = 44/62 (70%), Positives = 45/62 (72%)
Frame = -3 / -3
Query: 463 TPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASLXARTTFSVPSTAGT 284
TPFF SPAG PGLGT AEMDEVTTTRRTPPASL AR+TFSVPSTAGT
Sbjct: 974 TPFFSQ*SRSVQQRSSRTSPAGQPGLGTMAEMDEVTTTRRTPPASLAARSTFSVPSTAGT 795
Query: 283 IS 278
IS
Sbjct: 794 IS 789
Score = 53.3 bits (110), Expect(4) = 2e-054
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGASGFIGS LVR LL RGY+V A VL+P
Sbjct: 315 VTGASGFIGSCLVRRLLARGYSVHAAVLNP 404
Score = 51.0 bits (105), Expect(4) = 2e-054
Identities = 23/53 (43%), Positives = 23/53 (43%)
Frame = +3 / +2
Query: 114 HXXXXXXXXXXXRLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQ 272
H RL F RGCSGVFHLASPC VD V DPQ
Sbjct: 515 HALAAAGGGEGRRLRVFPGDLLDGAALLAAARGCSGVFHLASPCIVDRVLDPQ 673
Score = 42.8 bits (87), Expect(4) = 1e-026
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 271 WGSLTGSTVQGDARWKTPE 215
WGS T ST+QG+ARWKTPE
Sbjct: 672 WGSRTRSTMQGEARWKTPE 616
Score = 33.6 bits (67), Expect(4) = 1e-026
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / -2
Query: 505 HAAFSASVLEAGYQT 461
HAAFSA+V EAGYQT
Sbjct: 1692 HAAFSANVFEAGYQT 1648
Score = 27.2 bits (53), Expect(4) = 1e-026
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 343 EPMKPLAPVT 314
Score = 22.1 bits (42), Expect(4) = 2e-054
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 93 DDRAETDH 116
DD+AETDH
Sbjct: 488 DDKAETDH 511
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 146 bits (313), Expect(3) = 3e-053
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3 / +2
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q QLMVPAVEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYC
Sbjct: 7715603 QAQLMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYC 7715782
Query: 450 EKNGV 464
EKNGV
Sbjct: 7715783 EKNGV 7715797
Score = 99.1 bits (210), Expect(2) = 3e-026
Identities = 44/62 (70%), Positives = 45/62 (72%)
Frame = -3 / -1
Query: 463 TPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASLXARTTFSVPSTAGT 284
TPFF SPAG PGLGT AEMDEVTTTRRTPPASL AR+TFSVPSTAGT
Sbjct: 7715796 TPFFSQ*SRSVQQRSSRTSPAGQPGLGTMAEMDEVTTTRRTPPASLAARSTFSVPSTAGT 7715617
Query: 283 IS 278
IS
Sbjct: 7715616 IS 7715611
Score = 53.3 bits (110), Expect(3) = 3e-053
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGASGFIGS LVR LL RGY+V A VL+P
Sbjct: 7715137 VTGASGFIGSCLVRRLLARGYSVHAAVLNP 7715226
Score = 51.0 bits (105), Expect(3) = 3e-053
Identities = 23/53 (43%), Positives = 23/53 (43%)
Frame = +3 / +3
Query: 114 HXXXXXXXXXXXRLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQ 272
H RL F RGCSGVFHLASPC VD V DPQ
Sbjct: 7715337 HALAAARGGEGRRLRVFPGDLLDGAALLAAARGCSGVFHLASPCIVDRVLDPQ 7715495
Score = 42.8 bits (87), Expect(2) = 3e-026
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 271 WGSLTGSTVQGDARWKTPE 215
WGS T ST+QG+ARWKTPE
Sbjct: 7715494 WGSRTRSTMQGEARWKTPE 7715438
>gb|D15747.1|D15747 RICC1183A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1183A, mRNA sequence
Length = 500
Score = 123 bits (263), Expect(2) = 5e-036
Identities = 53/84 (63%), Positives = 60/84 (71%)
Frame = +3 / +1
Query: 255 PVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWT 434
P P +MVPAVEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DE
Sbjct: 148 PRPRPPGAVMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDEVAGL 327
Query: 435 DIDYCEKNGVWYPASKTLAEKAAW 506
++ + G W PA K L EK W
Sbjct: 328 NLTTSRRTGFW*PA*KXLEEKEEW 399
Score = 108 bits (230), Expect(2) = 6e-029
Identities = 47/76 (61%), Positives = 53/76 (69%)
Frame = -3 / -1
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
H++FS++ AGYQ P SPAG PGLGT AEMDEVTTTRRTPPASL
Sbjct: 398 HSSFSSNXF*AGYQNPVLLEVVKFSPATSSRTSPAGQPGLGTMAEMDEVTTTRRTPPASL 219
Query: 325 XARTTFSVPSTAGTIS 278
AR+TFSVPSTAGTI+
Sbjct: 218 AARSTFSVPSTAGTIT 171
Score = 51.5 bits (106), Expect(2) = 5e-036
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3 / +2
Query: 207 RGCSGVFHLASPCTVDPVKDPQNQ 278
RGCSGVFHLASPC VD V DPQ Q
Sbjct: 101 RGCSGVFHLASPCIVDRVLDPQAQ 172
Score = 42.8 bits (87), Expect(2) = 6e-029
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 271 WGSLTGSTVQGDARWKTPE 215
WGS T ST+QG+ARWKTPE
Sbjct: 165 WGSRTRSTMQGEARWKTPE 109
>dbj|AK062138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F11, full
insert sequence
Length = 1270
Score = 122 bits (262), Expect(2) = 3e-034
Identities = 51/117 (43%), Positives = 68/117 (58%)
Frame = +3 / +1
Query: 153 LSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKD 332
LS F+ GC GVFH+ASP D + DP+ ++M PAV+GTL+V+
Sbjct: 277 LSLFKADVLDAGELSAAIAGCEGVFHVASPVPGDKIVDPELEVMAPAVKGTLSVLEVCSS 456
Query: 333 AGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAA 503
+ V++VVV SS +AV NP WP G+ DE CW+D C + WY ASK +AEK A
Sbjct: 457 SKKVQKVVVVSSTAAVHYNPNWPPGKPKDESCWSDRKICMEKKEWYSASKVIAEKMA 627
Score = 46.0 bits (94), Expect(2) = 3e-034
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA GFIGS LV+ LL RGY V A + DP D
Sbjct: 136 VTGAGGFIGSWLVKLLLSRGYAVHATLRDPCD 231
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 146 bits (313), Expect = 2e-033
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3 / +2
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q QLMVPAVEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYC
Sbjct: 34981766 QAQLMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYC 34981945
Query: 450 EKNGV 464
EKNGV
Sbjct: 34981946 EKNGV 34981960
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 146 bits (313), Expect = 2e-033
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3 / +2
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q QLMVPAVEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYC
Sbjct: 34127441 QAQLMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYC 34127620
Query: 450 EKNGV 464
EKNGV
Sbjct: 34127621 EKNGV 34127635
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 146 bits (313), Expect = 2e-033
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3 / +1
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q QLMVPAVEGTLNV+RA KDAGGVRRVVVTSSISA+VP+PGWPAGEV DERCWTD+DYC
Sbjct: 34036969 QAQLMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCWTDLDYC 34037148
Query: 450 EKNGV 464
EKNGV
Sbjct: 34037149 EKNGV 34037163
>dbj|AK068648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159B10, full
insert sequence
Length = 1452
Score = 105 bits (224), Expect(3) = 3e-030
Identities = 44/104 (42%), Positives = 59/104 (56%)
Frame = +3 / +2
Query: 153 LSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKD 332
LS F+ GC GVFH+ASP D + DP+ ++M PAV+GTLNV+
Sbjct: 278 LSLFKADVLDAGELSAAIAGCEGVFHVASPVPGDKIVDPELEVMAPAVKGTLNVLEVCSS 457
Query: 333 AGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGV 464
+ V++VVV SS +AV NP WP G+ DE CW+D C + V
Sbjct: 458 SKKVQKVVVVSSTAAVHYNPNWPPGKPKDESCWSDRKICMEKKV 589
Score = 46.0 bits (94), Expect(3) = 3e-030
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA GFIGS LV+ LL RGY V A + DP D
Sbjct: 137 VTGAGGFIGSWLVKLLLSRGYAVHATLRDPCD 232
Score = 25.4 bits (49), Expect(3) = 3e-030
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 465 WYPASKTLAEKAA 503
WY ASK +AEK A
Sbjct: 725 WYSASKVIAEKMA 763
>gb|CB678909.1|CB678909 OSJNEf01L21.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf01L21 5', mRNA sequence
Length = 791
Score = 89.5 bits (189), Expect(3) = 3e-029
Identities = 38/78 (48%), Positives = 50/78 (64%)
Frame = +3 / +1
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q Q++ PAV GT V++A +AG VRRVV TSSI AV +P VVDE CW+D+++C
Sbjct: 442 QEQMVEPAVRGTEYVIKAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFC 621
Query: 450 EKNGVWYPASKTLAEKAA 503
+K WY K +AE A
Sbjct: 622 KKTKNWYCYGKAVAEHEA 675
Score = 44.6 bits (91), Expect(3) = 3e-029
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 95 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 190
Score = 35.9 bits (72), Expect(3) = 3e-029
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVK 263
GC GVFH ASP T DPV+
Sbjct: 293 GCHGVFHTASPVTDDPVR 346
>dbj|AK106439.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D08, full
insert sequence
Length = 1420
Score = 61.1 bits (127), Expect(3) = 2e-028
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 393 GWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G GE VDE CW+D+D+C G WY +KT+AE+AAW
Sbjct: 580 GGGGGEEVDETCWSDLDHCRDTGNWYCYAKTVAEQAAW 693
Score = 60.2 bits (125), Expect(3) = 2e-028
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +3 / +1
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPG 395
T P+ D +++ PAV G NV+ A DAGGVRRVV+TSSI AV G
Sbjct: 439 TASPITDDPEKMIEPAVSGARNVITAAADAGGVRRVVMTSSIGAVYMGGG 588
Score = 49.2 bits (101), Expect(3) = 2e-028
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GFI S LV+ LL +GY VR V +PDD A+ H
Sbjct: 217 VTGAGGFIASWLVKLLLEKGYAVRGTVRNPDDAAKNAH 330
>ref|XM_481219.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1420
Score = 61.1 bits (127), Expect(3) = 2e-028
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 393 GWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G GE VDE CW+D+D+C G WY +KT+AE+AAW
Sbjct: 580 GGGGGEEVDETCWSDLDHCRDTGNWYCYAKTVAEQAAW 693
Score = 60.2 bits (125), Expect(3) = 2e-028
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +3 / +1
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPG 395
T P+ D +++ PAV G NV+ A DAGGVRRVV+TSSI AV G
Sbjct: 439 TASPITDDPEKMIEPAVSGARNVITAAADAGGVRRVVMTSSIGAVYMGGG 588
Score = 49.2 bits (101), Expect(3) = 2e-028
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GFI S LV+ LL +GY VR V +PDD A+ H
Sbjct: 217 VTGAGGFIASWLVKLLLEKGYAVRGTVRNPDDAAKNAH 330
>dbj|AK105802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A12, full
insert sequence
Length = 1423
Score = 105 bits (223), Expect(2) = 2e-027
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A +AG VRRVV TSSI AV +P VVDE
Sbjct: 476 TASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 655
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+DYC++ WY K +AE+AAW
Sbjct: 656 CWSDLDYCKETRNWYCYGKAVAEQAAW 736
Score = 43.2 bits (88), Expect(2) = 2e-027
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL +GY V+ V +PDD
Sbjct: 257 VTGAAGYIASWLVKLLLEKGYTVKGTVRNPDD 352
>ref|XM_482628.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1423
Score = 105 bits (223), Expect(2) = 2e-027
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A +AG VRRVV TSSI AV +P VVDE
Sbjct: 476 TASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 655
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+DYC++ WY K +AE+AAW
Sbjct: 656 CWSDLDYCKETRNWYCYGKAVAEQAAW 736
Score = 43.2 bits (88), Expect(2) = 2e-027
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL +GY V+ V +PDD
Sbjct: 257 VTGAAGYIASWLVKLLLEKGYTVKGTVRNPDD 352
>dbj|AK105870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A12, full
insert sequence
Length = 1439
Score = 105 bits (223), Expect(2) = 2e-027
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = +3 / +3
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A +AG VRRVV TSSI AV +P VVDE
Sbjct: 477 TASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 656
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+DYC++ WY K +AE+AAW
Sbjct: 657 CWSDLDYCKETRNWYCYGKAVAEQAAW 737
Score = 43.2 bits (88), Expect(2) = 2e-027
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL +GY V+ V +PDD
Sbjct: 258 VTGAAGYIASWLVKLLLEKGYTVKGTVRNPDD 353
>ref|XM_507587.1| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1
mRNA
Length = 1439
Score = 105 bits (223), Expect(2) = 2e-027
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = +3 / +3
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A +AG VRRVV TSSI AV +P VVDE
Sbjct: 477 TASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 656
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+DYC++ WY K +AE+AAW
Sbjct: 657 CWSDLDYCKETRNWYCYGKAVAEQAAW 737
Score = 43.2 bits (88), Expect(2) = 2e-027
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL +GY V+ V +PDD
Sbjct: 258 VTGAAGYIASWLVKLLLEKGYTVKGTVRNPDD 353
>dbj|AK072872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143B20, full
insert sequence
Length = 1441
Score = 105 bits (223), Expect(2) = 2e-027
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = +3 / +3
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A +AG VRRVV TSSI AV +P VVDE
Sbjct: 477 TASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 656
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+DYC++ WY K +AE+AAW
Sbjct: 657 CWSDLDYCKETRNWYCYGKAVAEQAAW 737
Score = 43.2 bits (88), Expect(2) = 2e-027
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL +GY V+ V +PDD
Sbjct: 258 VTGAAGYIASWLVKLLLEKGYTVKGTVRNPDD 353
>ref|XM_507244.2| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1
mRNA
Length = 1441
Score = 105 bits (223), Expect(2) = 2e-027
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = +3 / +3
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A +AG VRRVV TSSI AV +P VVDE
Sbjct: 477 TASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 656
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+DYC++ WY K +AE+AAW
Sbjct: 657 CWSDLDYCKETRNWYCYGKAVAEQAAW 737
Score = 43.2 bits (88), Expect(2) = 2e-027
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL +GY V+ V +PDD
Sbjct: 258 VTGAAGYIASWLVKLLLEKGYTVKGTVRNPDD 353
>ref|NM_189520.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 984
Score = 108 bits (230), Expect(2) = 3e-027
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3 / +1
Query: 339 GVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G RRVVVTSSISA+VPNPG AGE+VDER WTD+++C+ G WYP SKTLAE+AAW
Sbjct: 349 GARRVVVTSSISAMVPNPGLAAGELVDERSWTDMEFCKARGKWYPVSKTLAERAAW 516
Score = 38.6 bits (78), Expect(2) = 3e-027
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRA 77
VTG +GFIGS +VR LL RGY V A
Sbjct: 25 VTGGNGFIGSWIVRILLARGYAVTA 99
>dbj|AK062411.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-F01, full
insert sequence
Length = 1175
Score = 108 bits (230), Expect(2) = 4e-027
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3 / +3
Query: 339 GVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G RRVVVTSSISA+VPNPG AGE+VDER WTD+++C+ G WYP SKTLAE+AAW
Sbjct: 402 GARRVVVTSSISAMVPNPGLAAGELVDERSWTDMEFCKARGKWYPVSKTLAERAAW 569
Score = 38.6 bits (78), Expect(2) = 4e-027
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRA 77
VTG +GFIGS +VR LL RGY V A
Sbjct: 78 VTGGNGFIGSWIVRILLARGYAVTA 152
>gb|AACV01017860.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017860, whole
genome shotgun sequence
Length = 40232
Score = 61.1 bits (127), Expect(4) = 2e-026
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3 / -3
Query: 393 GWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G GE VDE CW+D+D+C G WY +KT+AE+AAW
Sbjct: 33609 GGGGGEEVDETCWSDLDHCRDTGNWYCYAKTVAEQAAW 33496
Score = 54.2 bits (112), Expect(4) = 2e-026
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +3 / -3
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPG 395
Q +++ PAV G NV+ A DAGGVRRVV+TSSI AV G
Sbjct: 33726 QEKMIEPAVSGARNVITAAADAGGVRRVVMTSSIGAVYMGGG 33601
Score = 41.4 bits (84), Expect(4) = 2e-026
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3 / -3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKD 266
RL+ R GC GVFH ASP T DPV+D
Sbjct: 33939 RLTLVRAELLDKESLAAAFAGCEGVFHTASPITDDPVRD 33823
Score = 39.1 bits (79), Expect(4) = 2e-026
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3 / -1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGA GFI S LV+ LL +GY VR V +P
Sbjct: 34763 VTGAGGFIASWLVKLLLEKGYAVRGTVRNP 34674
>gb|CB660333.1|CB660333 OSJNEd01P10.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01P10 5', mRNA sequence
Length = 792
Score = 96.8 bits (205), Expect(2) = 1e-025
Identities = 41/86 (47%), Positives = 54/86 (62%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V++A +AG VRRVV TSSI AV +P VVDE
Sbjct: 335 TASPVTDDPEQMVEPAVRGTEYVIKAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 514
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAA 503
CW+D+++C+K WY K +AE+ A
Sbjct: 515 CWSDLEFCKKTKNWYCYGKAVAEQEA 592
Score = 44.6 bits (91), Expect(2) = 1e-025
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 116 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 211
>gb|CB679593.1|CB679593 OSJNEf03E14.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03E14 5', mRNA sequence
Length = 813
Score = 96.8 bits (205), Expect(2) = 1e-025
Identities = 41/86 (47%), Positives = 54/86 (62%)
Frame = +3 / +1
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V++A +AG VRRVV TSSI AV +P VVDE
Sbjct: 307 TASPVTDDPEQMVEPAVRGTEYVIKAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 486
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAA 503
CW+D+++C+K WY K +AE+ A
Sbjct: 487 CWSDLEFCKKTKNWYCYGKAVAEQEA 564
Score = 44.6 bits (91), Expect(2) = 1e-025
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 88 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 183
>dbj|AP007260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
fosmid clone: OSJNOa275J08
Length = 36356
Score = 108 bits (230), Expect(2) = 1e-025
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3 / +3
Query: 339 GVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G RRVVVTSSISA+VPNPG AGE+VDER WTD+++C+ G WYP SKTLAE+AAW
Sbjct: 11052 GARRVVVTSSISAMVPNPGLAAGELVDERSWTDMEFCKARGKWYPVSKTLAERAAW 11219
Score = 38.6 bits (78), Expect(2) = 1e-025
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRA 77
VTG +GFIGS +VR LL RGY V A
Sbjct: 10728 VTGGNGFIGSWIVRILLARGYAVTA 10802
>ref|NM_190422.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 981
Score = 77.6 bits (163), Expect(3) = 1e-025
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ G GVFHLASP T+ P +DP+ +L+ PAV GTLNV+RA K
Sbjct: 181 RLRLFQMDLLDPASITPAVDGAHGVFHLASPLTLHPTQDPEGELLKPAVSGTLNVLRAAK 360
Query: 330 DAGGVRRVVVTSSISAV 380
D G R +++ S ++ V
Sbjct: 361 DCGVARVMLMASQVAIV 411
Score = 50.6 bits (104), Expect(3) = 1e-025
Identities = 26/51 (50%), Positives = 27/51 (52%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDHXXXXXXXXXXXRL 155
VTG SGFIGS LVR LL RGY V A V + D ET H RL
Sbjct: 40 VTGGSGFIGSWLVRLLLDRGYTVHATVKNLQDDGETRHLQALDGADTRLRL 192
Score = 29.5 bits (58), Expect(3) = 1e-025
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 412 SSTSVAGPTSTTARRTGFGT 471
SST+ AGPTS+++R GT
Sbjct: 440 SSTTTAGPTSSSSRNISIGT 499
>dbj|AK102436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093J18, full
insert sequence
Length = 1094
Score = 68.9 bits (144), Expect(3) = 2e-025
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SSI+AV NP WP + E W+D + C KN WY SKT+AE+ A+
Sbjct: 392 VKRVVMVSSIAAVFSNPNWPKDKAFTEDSWSDEELCRKNQDWYYLSKTVAEREAF 556
Score = 56.1 bits (116), Expect(3) = 2e-025
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL + GC GVFH+ASP +P+ +++ PAV GTLNV++A
Sbjct: 203 RLQLLKADLLDYDSVASAVAGCEGVFHVASPVPSGRSTNPEVEVIAPAVTGTLNVLKACH 382
Query: 330 DAGGVRRVVVTS 365
+A R V+V+S
Sbjct: 383 EAKVKRVVMVSS 418
Score = 32.2 bits (64), Expect(3) = 2e-025
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S+ V LL RG G + A+ DH
Sbjct: 62 VTGAGGFMASSHVELLLSRGNYAVRGTVRDPGDAKNDH 175
>gb|CB647560.1|CB647560 OSJNEb10I16.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10I16 5', mRNA sequence
Length = 631
Score = 68.9 bits (144), Expect(3) = 2e-025
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SSI+AV NP WP + E W+D + C KN WY SKT+AE+ A+
Sbjct: 417 VKRVVMVSSIAAVFSNPNWPKDKAFTEDSWSDEELCRKNQDWYYLSKTVAEREAF 581
Score = 56.1 bits (116), Expect(3) = 2e-025
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL + GC GVFH+ASP +P+ +++ PAV GTLNV++A
Sbjct: 228 RLQLLKADLLDYDSVASAVAGCEGVFHVASPVPSGRSTNPEVEVIAPAVTGTLNVLKACH 407
Query: 330 DAGGVRRVVVTS 365
+A R V+V+S
Sbjct: 408 EAKVKRVVMVSS 443
Score = 32.2 bits (64), Expect(3) = 2e-025
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S+ V LL RG G + A+ DH
Sbjct: 87 VTGAGGFMASSHVELLLSRGNYAVRGTVRDPGDAKNDH 200
>gb|CA758807.1|CA758807 BR030025000_PLATE_E11_85_086.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030025000_PLATE_E11_85_086.ab1 similar to NP_180918.1|
(NM_128920) putative cinnamoyl-CoA reductase
[Arabidopsis thaliana] gi|2459448|gb|AAB80683.1|
(AC002332) putative cinnamoyl-CoA reductase [Arabidopsis
thaliana..., mRNA sequence
Length = 622
Score = 68.9 bits (144), Expect(3) = 2e-025
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SSI+AV NP WP + E W+D + C KN WY SKT+AE+ A+
Sbjct: 425 VKRVVMVSSIAAVFSNPNWPKDKAFTEDSWSDEELCRKNQDWYYLSKTVAEREAF 589
Score = 56.1 bits (116), Expect(3) = 2e-025
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL + GC GVFH+ASP +P+ +++ PAV GTLNV++A
Sbjct: 236 RLQLLKADLLDYDSVASAVAGCEGVFHVASPVPSGRSTNPEVEVIAPAVTGTLNVLKACH 415
Query: 330 DAGGVRRVVVTS 365
+A R V+V+S
Sbjct: 416 EAKVKRVVMVSS 451
Score = 32.2 bits (64), Expect(3) = 2e-025
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S+ V LL RG G + A+ DH
Sbjct: 95 VTGAGGFMASSHVELLLSRGNYAVRGTVRDPGDAKNDH 208
>dbj|AK104860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D11, full
insert sequence
Length = 1245
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 41/86 (47%), Positives = 54/86 (62%)
Frame = +3 / +1
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V++A +AG VRRVV TSSI AV +P VVDE
Sbjct: 349 TASPVTDDPEQMVEPAVRGTEYVIKAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 528
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAA 503
CW+D+++C+K WY K +AE+ A
Sbjct: 529 CWSDLEFCKKTKNWYCYGKAVAEQEA 606
Score = 44.6 bits (91), Expect(2) = 2e-025
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 130 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 225
>dbj|AK107198.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-A12, full
insert sequence
Length = 1253
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 41/86 (47%), Positives = 54/86 (62%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V++A +AG VRRVV TSSI AV +P VVDE
Sbjct: 344 TASPVTDDPEQMVEPAVRGTEYVIKAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 523
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAA 503
CW+D+++C+K WY K +AE+ A
Sbjct: 524 CWSDLEFCKKTKNWYCYGKAVAEQEA 601
Score = 44.6 bits (91), Expect(2) = 2e-025
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 125 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 220
>dbj|AK067949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P15, full
insert sequence
Length = 1265
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 41/86 (47%), Positives = 54/86 (62%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V++A +AG VRRVV TSSI AV +P VVDE
Sbjct: 350 TASPVTDDPEQMVEPAVRGTEYVIKAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 529
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAA 503
CW+D+++C+K WY K +AE+ A
Sbjct: 530 CWSDLEFCKKTKNWYCYGKAVAEQEA 607
Score = 44.6 bits (91), Expect(2) = 2e-025
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 131 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 226
>dbj|AP004655.2| Oryza sativa (japonica cultivar-group) chromosome 8 clone P0019C09, ***
SEQUENCING IN PROGRESS ***
Length = 151928
Score = 61.1 bits (127), Expect(3) = 2e-025
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3 / -1
Query: 393 GWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G GE VDE CW+D+D+C G WY +KT+AE+AAW
Sbjct: 146339 GGGGGEEVDETCWSDLDHCRDTGNWYCYAKTVAEQAAW 146226
Score = 54.2 bits (112), Expect(3) = 2e-025
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +3 / -1
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPG 395
Q +++ PAV G NV+ A DAGGVRRVV+TSSI AV G
Sbjct: 146456 QEKMIEPAVSGARNVITAAADAGGVRRVVMTSSIGAVYMGGG 146331
Score = 41.4 bits (84), Expect(3) = 2e-025
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3 / -1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKD 266
RL+ R GC GVFH ASP T DPV+D
Sbjct: 146669 RLTLVRAELLDKESLAAAFAGCEGVFHTASPITDDPVRD 146553
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBa0091M20
Length = 132976
Score = 61.1 bits (127), Expect(3) = 2e-025
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 393 GWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G GE VDE CW+D+D+C G WY +KT+AE+AAW
Sbjct: 10741 GGGGGEEVDETCWSDLDHCRDTGNWYCYAKTVAEQAAW 10854
Score = 54.2 bits (112), Expect(3) = 2e-025
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +3 / +1
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPG 395
Q +++ PAV G NV+ A DAGGVRRVV+TSSI AV G
Sbjct: 10624 QEKMIEPAVSGARNVITAAADAGGVRRVVMTSSIGAVYMGGG 10749
Score = 41.4 bits (84), Expect(3) = 2e-025
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKD 266
RL+ R GC GVFH ASP T DPV+D
Sbjct: 10411 RLTLVRAELLDKESLAAAFAGCEGVFHTASPITDDPVRD 10527
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0020E09
Length = 149195
Score = 108 bits (230), Expect(2) = 5e-025
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3 / +1
Query: 339 GVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G RRVVVTSSISA+VPNPG AGE+VDER WTD+++C+ G WYP SKTLAE+AAW
Sbjct: 124432 GARRVVVTSSISAMVPNPGLAAGELVDERSWTDMEFCKARGKWYPVSKTLAERAAW 124599
Score = 38.6 bits (78), Expect(2) = 5e-025
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRA 77
VTG +GFIGS +VR LL RGY V A
Sbjct: 124108 VTGGNGFIGSWIVRILLARGYAVTA 124182
>dbj|AK107469.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B02, full
insert sequence
Length = 1507
Score = 75.8 bits (159), Expect(3) = 3e-024
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +3 / +2
Query: 339 GVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
GVRRVVV SS +AV+ NP +P V+DE W+D YC WY SKTLAE+ AW
Sbjct: 593 GVRRVVVVSSAAAVILNPAFPRDAVLDEDAWSDEHYCRSIENWYCLSKTLAEREAW 760
Score = 57.9 bits (120), Expect(3) = 3e-024
Identities = 29/90 (32%), Positives = 37/90 (41%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDHXXXXXXXXXXXRLSFFRCXXXX 182
VTGA GF+ S LV LL G V G + A+ H RL F+
Sbjct: 87 VTGAGGFVASWLVHRLLSSGDYVVHGTVRDPSDAKNGHLREMDYGAGERRLRLFKADVLD 266
Query: 183 XXXXXXXXRGCSGVFHLASPCTVDPVKDPQ 272
GC+GVFH+ASP +P+
Sbjct: 267 RASVAAAVAGCAGVFHVASPVPASKPHNPE 356
Score = 23.1 bits (44), Expect(3) = 3e-024
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1 / +3
Query: 283 WCLRWKGR*TWCAR 324
W RW+ R TW R
Sbjct: 540 WLRRWRERGTWSRR 581
>dbj|AK102061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082D10, full
insert sequence
Length = 1090
Score = 81.3 bits (171), Expect(3) = 5e-024
Identities = 36/73 (49%), Positives = 45/73 (61%)
Frame = +3 / +2
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
Q Q++ PAV GT V+ A +AG VRRVV TSSI AV +P VVDE CW+D+DYC
Sbjct: 764 QEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLDYC 943
Query: 450 EKNGVWYPASKTL 488
++ V A L
Sbjct: 944 KETRVGASAKSNL 982
Score = 37.7 bits (76), Expect(3) = 5e-024
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGA+G+I S LV+ LL +GY V+ V +P
Sbjct: 258 VTGAAGYIASWLVKLLLEKGYTVKGTVRNP 347
Score = 35.9 bits (72), Expect(3) = 5e-024
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVK 263
GC GVFH ASP T DPV+
Sbjct: 550 GCHGVFHTASPVTDDPVR 603
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 108 bits (230), Expect(2) = 8e-024
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3 / +1
Query: 339 GVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G RRVVVTSSISA+VPNPG AGE+VDER WTD+++C+ G WYP SKTLAE+AAW
Sbjct: 2945941 GARRVVVTSSISAMVPNPGLAAGELVDERSWTDMEFCKARGKWYPVSKTLAERAAW 2946108
Score = 38.6 bits (78), Expect(2) = 8e-024
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRA 77
VTG +GFIGS +VR LL RGY V A
Sbjct: 2945617 VTGGNGFIGSWIVRILLARGYAVTA 2945691
>dbj|AK100234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051O20, full
insert sequence
Length = 1612
Score = 72.1 bits (151), Expect(3) = 2e-023
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3 / +3
Query: 339 GVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G++RVV TSSI V NP + VD+ CW+D++YC++ WY +KT+AE+ AW
Sbjct: 588 GIKRVVFTSSIGTVYMNPYRDPNKPVDDTCWSDLEYCKRTENWYCYAKTVAEQGAW 755
Score = 42.3 bits (86), Expect(3) = 2e-023
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA GFI S LV+ LL +GY VR V +P D
Sbjct: 279 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPMD 374
Score = 35.4 bits (71), Expect(3) = 2e-023
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVK 263
RL R GC GVFH ASP T DP K
Sbjct: 417 RLVLLRADLLDPDSLVAAFTGCEGVFHAASPVTDDPEK 530
>ref|XM_450149.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1614
Score = 72.1 bits (151), Expect(3) = 2e-023
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3 / +3
Query: 339 GVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
G++RVV TSSI V NP + VD+ CW+D++YC++ WY +KT+AE+ AW
Sbjct: 588 GIKRVVFTSSIGTVYMNPYRDPNKPVDDTCWSDLEYCKRTENWYCYAKTVAEQGAW 755
Score = 42.3 bits (86), Expect(3) = 2e-023
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA GFI S LV+ LL +GY VR V +P D
Sbjct: 279 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPMD 374
Score = 35.4 bits (71), Expect(3) = 2e-023
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVK 263
RL R GC GVFH ASP T DP K
Sbjct: 417 RLVLLRADLLDPDSLVAAFTGCEGVFHAASPVTDDPEK 530
>ref|NM_193168.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1359
Score = 74.4 bits (156), Expect(3) = 2e-023
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ PAV+GTLNV+ + K A R +V +S + VVDE ++
Sbjct: 643 VKDPKAELLDPAVKGTLNVLGSCKKASIRRVIVTSSMAAVAYNGKPRTPDVVVDETWFSV 822
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEK+ WY SKTLAE+AAW
Sbjct: 823 PEICEKHQQWYVLSKTLAEEAAW 891
Score = 50.1 bits (103), Expect(3) = 2e-023
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LVR LL RGY VRA + D D +T H
Sbjct: 397 VTGASGYIASWLVRLLLARGYTVRATIRDTSDPKKTLH 510
Score = 25.4 bits (49), Expect(3) = 2e-023
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F GC VFH ASP
Sbjct: 538 RLHLFEANLLEEGSFDAAVNGCDCVFHTASP 630
>dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162A03, full
insert sequence
Length = 1334
Score = 74.4 bits (156), Expect(3) = 2e-023
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +3 / +3
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ PAV+GTLNV+ + K A R +V +S + VVDE ++
Sbjct: 456 VKDPKAELLDPAVKGTLNVLGSCKKASIRRVIVTSSMAAVAYNGKPRTPDVVVDETWFSV 635
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEK+ WY SKTLAE+AAW
Sbjct: 636 PEICEKHQQWYVLSKTLAEEAAW 704
Score = 50.1 bits (103), Expect(3) = 2e-023
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LVR LL RGY VRA + D D +T H
Sbjct: 210 VTGASGYIASWLVRLLLARGYTVRATIRDTSDPKKTLH 323
Score = 25.4 bits (49), Expect(3) = 2e-023
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F GC VFH ASP
Sbjct: 351 RLHLFEANLLEEGSFDAAVNGCDCVFHTASP 443
>dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F12, full
insert sequence
Length = 1322
Score = 74.4 bits (156), Expect(3) = 2e-023
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +3 / +3
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ PAV+GTLNV+ + K A R +V +S + VVDE ++
Sbjct: 468 VKDPKAELLDPAVKGTLNVLGSCKKASIRRVIVTSSMAAVAYNGKPRTPDVVVDETWFSV 647
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEK+ WY SKTLAE+AAW
Sbjct: 648 PEICEKHQQWYVLSKTLAEEAAW 716
Score = 50.1 bits (103), Expect(3) = 2e-023
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LVR LL RGY VRA + D D +T H
Sbjct: 222 VTGASGYIASWLVRLLLARGYTVRATIRDTSDPKKTLH 335
Score = 25.4 bits (49), Expect(3) = 2e-023
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F GC VFH ASP
Sbjct: 363 RLHLFEANLLEEGSFDAAVNGCDCVFHTASP 455
>gb|CB645627.1|CB645627 OSJNEb07H08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07H08 5', mRNA sequence
Length = 784
Score = 74.4 bits (156), Expect(3) = 2e-023
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +3 / +3
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ PAV+GTLNV+ + K A R +V +S + VVDE ++
Sbjct: 432 VKDPKAELLDPAVKGTLNVLGSCKKASIRRVIVTSSMAAVAYNGKPRTPDVVVDETWFSV 611
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEK+ WY SKTLAE+AAW
Sbjct: 612 PEICEKHQQWYVLSKTLAEEAAW 680
Score = 50.1 bits (103), Expect(3) = 2e-023
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LVR LL RGY VRA + D D +T H
Sbjct: 186 VTGASGYIASWLVRLLLARGYTVRATIRDTSDPKKTLH 299
Score = 25.4 bits (49), Expect(3) = 2e-023
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F GC VFH ASP
Sbjct: 327 RLHLFEANLLEEGSFDAAVNGCDCVFHTASP 419
>dbj|AK099770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D01, full
insert sequence
Length = 2836
Score = 60.2 bits (125), Expect(3) = 3e-023
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL R C GVFH ASP + + +++VPA+ GTLNV+++ K
Sbjct: 1804 RLQLVRADLMEEGSFDDAVMACEGVFHTASPVLAKSDSNCKEEMLVPAINGTLNVLKSCK 1983
Query: 330 DAGGVRRVVVTSSISAV 380
++RVV+TSS S V
Sbjct: 1984 KNPFLKRVVLTSSSSTV 2034
Score = 45.5 bits (93), Expect(3) = 3e-023
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGF+ S L++ LL GY+V V DP +R + H
Sbjct: 1663 VTGASGFVASWLIKRLLEAGYHVIGTVRDPSNRDKVSH 1776
Score = 43.7 bits (89), Expect(3) = 3e-023
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3 / +1
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
+DE W+ + CEK +WY +K AEKAAW
Sbjct: 2071 LDETIWSSVALCEKLQLWYALAKISAEKAAW 2163
>gb|BP184676.1|BP184676 BP184676 pNS rice panicle cDNA, germ cell generating stage Oryza
sativa (japonica cultivar-group) cDNA clone 14FPG037,
mRNA sequence
Length = 1210
Score = 60.2 bits (125), Expect(3) = 3e-023
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL R C GVFH ASP + + +++VPA+ GTLNV+++ K
Sbjct: 186 RLQLVRADLMEEGSFDDAVMACEGVFHTASPVLAKSDSNCKEEMLVPAINGTLNVLKSCK 365
Query: 330 DAGGVRRVVVTSSISAV 380
++RVV+TSS S V
Sbjct: 366 KNPFLKRVVLTSSSSTV 416
Score = 45.5 bits (93), Expect(3) = 3e-023
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGF+ S L++ LL GY+V V DP +R + H
Sbjct: 45 VTGASGFVASWLIKRLLEAGYHVIGTVRDPSNRDKVSH 158
Score = 43.7 bits (89), Expect(3) = 3e-023
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3 / +3
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
+DE W+ + CEK +WY +K AEKAAW
Sbjct: 453 LDETIWSSVALCEKLQLWYALAKISAEKAAW 545
>dbj|AB110186.1| Oryza sativa (japonica cultivar-group) mRNA for dihydroflavonol
reductase, complete cds, clone: 14FPG037
Length = 1194
Score = 60.2 bits (125), Expect(3) = 3e-023
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL R C GVFH ASP + + +++VPA+ GTLNV+++ K
Sbjct: 186 RLQLVRADLMEEGSFDDAVMACEGVFHTASPVLAKSDSNCKEEMLVPAINGTLNVLKSCK 365
Query: 330 DAGGVRRVVVTSSISAV 380
++RVV+TSS S V
Sbjct: 366 KNPFLKRVVLTSSSSTV 416
Score = 45.5 bits (93), Expect(3) = 3e-023
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGF+ S L++ LL GY+V V DP +R + H
Sbjct: 45 VTGASGFVASWLIKRLLEAGYHVIGTVRDPSNRDKVSH 158
Score = 43.7 bits (89), Expect(3) = 3e-023
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3 / +3
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
+DE W+ + CEK +WY +K AEKAAW
Sbjct: 453 LDETIWSSVALCEKLQLWYALAKISAEKAAW 545
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,665,015,565
Number of Sequences: 438736
Number of extensions: 17027254
Number of successful extensions: 181431
Number of sequences better than 1.0e-020: 74
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 99882927870
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)