TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2621963.2.1
(743 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA... 189 6e-050
ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA 189 6e-050
dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA... 189 6e-050
dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA... 189 8e-050
gb|AACV01013105.1| Oryza sativa (japonica cultivar-group) c... 189 1e-048
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 189 7e-048
dbj|AB023482.2| Oryza sativa (japonica cultivar-group) geno... 189 7e-048
dbj|AP002864.2| Oryza sativa (japonica cultivar-group) geno... 189 7e-048
gb|AU078328.1|AU078328 AU078328 Rice panicle at ripening st... 189 3e-046
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 189 3e-046
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 189 3e-046
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 189 3e-046
dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA... 145 4e-033
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 145 4e-033
dbj|AP003523.3| Oryza sativa (japonica cultivar-group) geno... 145 4e-033
gb|AACV01014669.1| Oryza sativa (japonica cultivar-group) c... 145 4e-033
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 145 4e-033
gb|AU078327.1|AU078327 AU078327 Rice panicle at ripening st... 62 5e-032
gb|CD670796.1|CD670796 OsMR213 5MT resistant rice mutant cD... 138 5e-031
gb|CB660560.1|CB660560 OSJNEd02H15.r OSJNEd Oryza sativa (j... 116 2e-027
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 115 3e-027
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 116 3e-027
emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromoso... 116 3e-027
gb|AACV01010468.1| Oryza sativa (japonica cultivar-group) c... 115 3e-027
gb|CB680925.1|CB680925 OSJNEf06H23.r OSJNEf Oryza sativa (j... 115 3e-027
gb|CB679398.1|CB679398 OSJNEf02N18.f OSJNEf Oryza sativa (j... 115 3e-027
gb|CB684926.1|CB684926 OSJNEf14O16.r OSJNEf Oryza sativa (j... 115 3e-027
gb|CB678992.1|CB678992 OSJNEf01P14.r OSJNEf Oryza sativa (j... 115 3e-027
gb|CB683325.1|CB683325 OSJNEf11J01.r OSJNEf Oryza sativa (j... 115 3e-027
gb|CB681355.1|CB681355 OSJNEf07H22.r OSJNEf Oryza sativa (j... 115 3e-027
gb|CA754554.1|CA754554 BR030001000_PLATE_F03_22_029.ab1 OA ... 115 3e-027
ref|XM_473863.1| Oryza sativa (japonica cultivar-group), p... 115 3e-027
gb|CB659556.1|CB659556 OSJNEc16K08.f OSJNEc Oryza sativa (j... 116 2e-026
ref|XM_473862.1| Oryza sativa (japonica cultivar-group), p... 116 2e-026
gb|CB680452.1|CB680452 OSJNEf05D04.r OSJNEf Oryza sativa (j... 105 3e-024
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 108 4e-024
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 108 4e-024
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 116 4e-024
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 108 4e-024
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 108 4e-024
gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbar... 108 4e-024
gb|AACV01005727.1| Oryza sativa (japonica cultivar-group) c... 108 4e-024
gb|CB679733.1|CB679733 OSJNEf03J15.r OSJNEf Oryza sativa (j... 108 4e-024
gb|CB679732.1|CB679732 OSJNEf03J15.f OSJNEf Oryza sativa (j... 108 4e-024
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 115 5e-024
gb|AU082168.1|AU082168 AU082168 Rice cDNA from young root O... 108 9e-022
gb|AU082336.1|AU082336 AU082336 Rice immature leaf includin... 108 9e-022
gb|AU097615.1|AU097615 AU097615 Rice panicle shorter than 3... 108 9e-022
gb|AU108185.1|AU108185 AU108185 Rice panicle (longer than 1... 108 9e-022
gb|AU161779.1|AU161779 AU161779 Rice shoot Oryza sativa (ja... 108 9e-022
gb|AU164217.1|AU164217 AU164217 Rice panicle (longer than 1... 108 9e-022
gb|CB681354.1|CB681354 OSJNEf07H22.f OSJNEf Oryza sativa (j... 108 9e-022
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 108 9e-022
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 108 9e-022
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 108 9e-022
gb|CV722026.1|CV722026 YBH--06-C10.b1 Rice before heading y... 99 2e-021
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 85 9e-021
emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromoso... 85 1e-020
gb|AACV01010566.1| Oryza sativa (japonica cultivar-group) c... 85 1e-020
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full
insert sequence
Length = 992
Score = 189 bits (407), Expect(2) = 6e-050
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 497 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 676
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 677 NINIYLPVALELLITCGKHPPPGFKC 754
Score = 108 bits (230), Expect(3) = 7e-031
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / -3
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 657 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 496
Score = 102 bits (218), Expect(3) = 3e-023
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / -2
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 670 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 524
Score = 42.8 bits (87), Expect(3) = 7e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 63 WPRRRGDVGWHVRWW*W 13
W RRR DVGWHV WW W
Sbjct: 364 WRRRRRDVGWHVWWWRW 314
Score = 35.4 bits (71), Expect(2) = 6e-050
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 14 HHHHRTCHPTSPRRLGH 64
H HH TCHPTS RR H
Sbjct: 315 HLHHHTCHPTSRRRRRH 365
Score = 29.0 bits (57), Expect(3) = 7e-031
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 782 VQFRRRRAGGT*SREAGACRR**A 711
Score = 24.0 bits (46), Expect(3) = 3e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 356 KPDGACLPQV 327
KP G CLPQV
Sbjct: 747 KPGGGCLPQV 718
Score = 23.5 bits (45), Expect(3) = 3e-023
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 57 RRRGDVGWHV 28
RRR DVGW+V
Sbjct: 394 RRRRDVGWNV 365
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 992
Score = 189 bits (407), Expect(2) = 6e-050
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 497 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 676
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 677 NINIYLPVALELLITCGKHPPPGFKC 754
Score = 108 bits (230), Expect(3) = 7e-031
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / -3
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 657 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 496
Score = 102 bits (218), Expect(3) = 3e-023
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / -2
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 670 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 524
Score = 42.8 bits (87), Expect(3) = 7e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 63 WPRRRGDVGWHVRWW*W 13
W RRR DVGWHV WW W
Sbjct: 364 WRRRRRDVGWHVWWWRW 314
Score = 35.4 bits (71), Expect(2) = 6e-050
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 14 HHHHRTCHPTSPRRLGH 64
H HH TCHPTS RR H
Sbjct: 315 HLHHHTCHPTSRRRRRH 365
Score = 29.0 bits (57), Expect(3) = 7e-031
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 782 VQFRRRRAGGT*SREAGACRR**A 711
Score = 24.0 bits (46), Expect(3) = 3e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 356 KPDGACLPQV 327
KP G CLPQV
Sbjct: 747 KPGGGCLPQV 718
Score = 23.5 bits (45), Expect(3) = 3e-023
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 57 RRRGDVGWHV 28
RRR DVGW+V
Sbjct: 394 RRRRDVGWNV 365
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full
insert sequence
Length = 1013
Score = 189 bits (407), Expect(2) = 6e-050
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 497 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 676
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 677 NINIYLPVALELLITCGKHPPPGFKC 754
Score = 108 bits (230), Expect(3) = 7e-031
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / -3
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 657 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 496
Score = 102 bits (218), Expect(3) = 3e-023
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / -2
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 670 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 524
Score = 42.8 bits (87), Expect(3) = 7e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 63 WPRRRGDVGWHVRWW*W 13
W RRR DVGWHV WW W
Sbjct: 364 WRRRRRDVGWHVWWWRW 314
Score = 35.4 bits (71), Expect(2) = 6e-050
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 14 HHHHRTCHPTSPRRLGH 64
H HH TCHPTS RR H
Sbjct: 315 HLHHHTCHPTSRRRRRH 365
Score = 29.0 bits (57), Expect(3) = 7e-031
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 782 VQFRRRRAGGT*SREAGACRR**A 711
Score = 24.0 bits (46), Expect(3) = 3e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 356 KPDGACLPQV 327
KP G CLPQV
Sbjct: 747 KPGGGCLPQV 718
Score = 23.5 bits (45), Expect(3) = 3e-023
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 57 RRRGDVGWHV 28
RRR DVGW+V
Sbjct: 394 RRRRDVGWNV 365
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full
insert sequence
Length = 1384
Score = 189 bits (407), Expect(2) = 8e-050
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 914 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 1093
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 1094 NINIYLPVALELLITCGKHPPPGFKC 1171
Score = 108 bits (230), Expect(3) = 1e-030
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / -2
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 1074 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 913
Score = 102 bits (218), Expect(3) = 3e-023
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / -1
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 1087 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 941
Score = 42.8 bits (87), Expect(3) = 1e-030
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / -1
Query: 63 WPRRRGDVGWHVRWW*W 13
W RRR DVGWHV WW W
Sbjct: 781 WRRRRRDVGWHVWWWRW 731
Score = 35.4 bits (71), Expect(2) = 8e-050
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 14 HHHHRTCHPTSPRRLGH 64
H HH TCHPTS RR H
Sbjct: 732 HLHHHTCHPTSRRRRRH 782
Score = 29.0 bits (57), Expect(3) = 1e-030
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 1199 VQFRRRRAGGT*SREAGACRR**A 1128
Score = 24.0 bits (46), Expect(3) = 3e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -2
Query: 356 KPDGACLPQV 327
KP G CLPQV
Sbjct: 1164 KPGGGCLPQV 1135
Score = 23.5 bits (45), Expect(3) = 3e-023
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -1
Query: 57 RRRGDVGWHV 28
RRR DVGW+V
Sbjct: 811 RRRRDVGWNV 782
>gb|AACV01013105.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013105, whole
genome shotgun sequence
Length = 17541
Score = 189 bits (407), Expect(2) = 1e-048
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / +3
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 16203 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 16382
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 16383 NINIYLPVALELLITCGKHPPPGFKC 16460
Score = 108 bits (230), Expect(3) = 2e-028
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / -3
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 16363 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 16202
Score = 102 bits (218), Expect(3) = 2e-024
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / -2
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 16376 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 16230
Score = 42.8 bits (87), Expect(3) = 2e-028
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 63 WPRRRGDVGWHVRWW*W 13
W RRR DVGWHV WW W
Sbjct: 16034 WRRRRRDVGWHVWWWRW 15984
Score = 35.4 bits (71), Expect(2) = 1e-048
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 14 HHHHRTCHPTSPRRLGH 64
H HH TCHPTS RR H
Sbjct: 15985 HLHHHTCHPTSRRRRRH 16035
Score = 29.0 bits (57), Expect(3) = 2e-028
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 16488 VQFRRRRAGGT*SREAGACRR**A 16417
Score = 27.6 bits (54), Expect(3) = 2e-024
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 63 WPRRRGDVGWHV 28
W RRR DVGW+V
Sbjct: 16106 WRRRRRDVGWNV 16071
Score = 24.0 bits (46), Expect(3) = 2e-024
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 356 KPDGACLPQV 327
KP G CLPQV
Sbjct: 16453 KPGGGCLPQV 16424
>ref|NT_079872.2| Oryza sativa (japonica cultivar-group)
Length = 1124013
Score = 189 bits (407), Expect(2) = 7e-048
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / -1
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 543339 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 543160
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 543159 NINIYLPVALELLITCGKHPPPGFKC 543082
Score = 108 bits (230), Expect(3) = 2e-026
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / +2
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 543179 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 543340
Score = 102 bits (218), Expect(2) = 2e-023
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / +1
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 543166 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 543312
Score = 42.8 bits (87), Expect(2) = 2e-023
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / +1
Query: 63 WPRRRGDVGWHVRWW*W 13
W RRR DVGWHV WW W
Sbjct: 543472 WRRRRRDVGWHVWWWRW 543522
Score = 29.0 bits (57), Expect(3) = 2e-026
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 543054 VQFRRRRAGGT*SREAGACRR**A 543125
Score = 25.8 bits (50), Expect(2) = 7e-048
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3 / -3
Query: 12 AITTTVRATLRPPDASAITTLRATVRSADAAGGAD 116
+I+TT+RATL P +AI + A AD
Sbjct: 543523 SISTTIRATLHPAADAAIRSTLHPAADAAVRPAAD 543419
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 57 RRRGDVGWHV 28
RRR DVGW+V
Sbjct: 543442 RRRRDVGWNV 543471
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
P0680A03
Length = 156054
Score = 189 bits (407), Expect(2) = 7e-048
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / -1
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 146862 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 146683
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 146682 NINIYLPVALELLITCGKHPPPGFKC 146605
Score = 108 bits (230), Expect(3) = 1e-026
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / +2
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 146702 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 146863
Score = 102 bits (218), Expect(3) = 2e-023
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / +1
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 146689 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 146835
Score = 42.8 bits (87), Expect(3) = 1e-026
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / +1
Query: 63 WPRRRGDVGWHVRWW*W 13
W RRR DVGWHV WW W
Sbjct: 146995 WRRRRRDVGWHVWWWRW 147045
Score = 29.0 bits (57), Expect(3) = 1e-026
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 146577 VQFRRRRAGGT*SREAGACRR**A 146648
Score = 25.8 bits (50), Expect(2) = 7e-048
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3 / -3
Query: 12 AITTTVRATLRPPDASAITTLRATVRSADAAGGAD 116
+I+TT+RATL P +AI + A AD
Sbjct: 147046 SISTTIRATLHPAADAAIRSTLHPAADAAVRPAAD 146942
Score = 24.0 bits (46), Expect(3) = 2e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / +2
Query: 356 KPDGACLPQV 327
KP G CLPQV
Sbjct: 146612 KPGGGCLPQV 146641
Score = 23.5 bits (45), Expect(3) = 2e-023
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 57 RRRGDVGWHV 28
RRR DVGW+V
Sbjct: 146965 RRRRDVGWNV 146994
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0033B09
Length = 143545
Score = 189 bits (407), Expect(2) = 7e-048
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / -2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 72012 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 71833
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 71832 NINIYLPVALELLITCGKHPPPGFKC 71755
Score = 108 bits (230), Expect(3) = 1e-026
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / +2
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 71852 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 72013
Score = 102 bits (218), Expect(3) = 2e-023
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / +1
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 71839 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 71985
Score = 42.8 bits (87), Expect(3) = 1e-026
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / +1
Query: 63 WPRRRGDVGWHVRWW*W 13
W RRR DVGWHV WW W
Sbjct: 72145 WRRRRRDVGWHVWWWRW 72195
Score = 29.0 bits (57), Expect(3) = 1e-026
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 71727 VQFRRRRAGGT*SREAGACRR**A 71798
Score = 25.8 bits (50), Expect(2) = 7e-048
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3 / -1
Query: 12 AITTTVRATLRPPDASAITTLRATVRSADAAGGAD 116
+I+TT+RATL P +AI + A AD
Sbjct: 72196 SISTTIRATLHPAADAAIRSTLHPAADAAVRPAAD 72092
Score = 24.0 bits (46), Expect(3) = 2e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / +2
Query: 356 KPDGACLPQV 327
KP G CLPQV
Sbjct: 71762 KPGGGCLPQV 71791
Score = 23.5 bits (45), Expect(3) = 2e-023
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +1
Query: 57 RRRGDVGWHV 28
RRR DVGW+V
Sbjct: 72115 RRRRDVGWNV 72144
>gb|AU078328.1|AU078328 AU078328 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11111_4Z, mRNA sequence
Length = 619
Score = 189 bits (407), Expect = 3e-046
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / +1
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 139 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 318
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 319 NINIYLPVALELLITCGKHPPPGFKC 396
Score = 108 bits (230), Expect(2) = 1e-024
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / -3
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 299 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 138
Score = 102 bits (218), Expect(2) = 2e-021
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / -2
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 312 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 166
Score = 29.0 bits (57), Expect(2) = 1e-024
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 424 VQFRRRRAGGT*SREAGACRR**A 353
Score = 24.0 bits (46), Expect(2) = 2e-021
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 356 KPDGACLPQV 327
KP G CLPQV
Sbjct: 389 KPGGGCLPQV 360
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 189 bits (407), Expect = 3e-046
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / -2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 3345227 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 3345048
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 3345047 NINIYLPVALELLITCGKHPPPGFKC 3344970
Score = 108 bits (230), Expect(3) = 1e-027
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / +1
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 3345067 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 3345228
Score = 102 bits (218), Expect(2) = 2e-022
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / +3
Query: 279 ARADGGAEAQRRVQVRHPLHQRAALGPGLLPDHQVDQPAQHVHARVQLQ 133
ARADGGAEA+R VQVRH LHQRAAL P LLPDHQVDQP QHVHARVQLQ
Sbjct: 3345054 ARADGGAEAERGVQVRHALHQRAALRPRLLPDHQVDQPPQHVHARVQLQ 3345200
Score = 42.8 bits (87), Expect(2) = 2e-022
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / +3
Query: 63 WPRRRGDVGWHVRWW*W 13
W RRR DVGWHV WW W
Sbjct: 3345396 WRRRRRDVGWHVWWWRW 3345446
Score = 29.0 bits (57), Expect(3) = 1e-027
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 391 VVFISRRAAGTGSPTARACRR**A 320
V F RRA GT S A ACRR**A
Sbjct: 3344942 VQFRRRRAGGT*SREAGACRR**A 3345013
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 63 WPRRRGDVGWHV 28
W RRR DVGW+V
Sbjct: 3345324 WRRRRRDVGWNV 3345359
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 189 bits (407), Expect = 3e-046
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / -3
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 3345227 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 3345048
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 3345047 NINIYLPVALELLITCGKHPPPGFKC 3344970
Score = 145 bits (312), Expect = 4e-033
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A + CP+D+LK+ ACVD+L GL+H+ IG +KCCPL++G+ +L+AA+CLCTTIR +LL
Sbjct: 24884483 ATQRCPVDSLKIGACVDLLGGLVHVGIGDPVVNKCCPLLEGLVELEAAVCLCTTIRLKLL 24884662
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LL+TCGK+ P G+ C
Sbjct: 24884663 NINIYLPLALQLLLTCGKNPPPGYTC 24884740
Score = 108 bits (230), Expect = 9e-022
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / +1
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 3345067 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 3345228
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 189 bits (407), Expect = 3e-046
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +1 / -3
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A +TCPID LKLNACVDVL GLIHLVIGQ+AR+KCCPLVQGVADLDAALCLCTTIRARLL
Sbjct: 3455308 ATKTCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLL 3455129
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LLITCGKH P GF+C
Sbjct: 3455128 NINIYLPVALELLITCGKHPPPGFKC 3455051
Score = 145 bits (312), Expect = 4e-033
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A + CP+D+LK+ ACVD+L GL+H+ IG +KCCPL++G+ +L+AA+CLCTTIR +LL
Sbjct: 25844048 ATQRCPVDSLKIGACVDLLGGLVHVGIGDPVVNKCCPLLEGLVELEAAVCLCTTIRLKLL 25844227
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LL+TCGK+ P G+ C
Sbjct: 25844228 NINIYLPLALQLLLTCGKNPPPGYTC 25844305
Score = 108 bits (230), Expect = 9e-022
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -1 / +3
Query: 266 VVQRHSAASRSATPCTSGQHLDLASCPITRWISPLSTSTHAFSFSVSIGHVRTA 105
VVQR SAASRSATPCTSGQH LA CPITRWISP STSTHAFSFS SIGHV A
Sbjct: 3455148 VVQRQSAASRSATPCTSGQHFALAFCPITRWISPPSTSTHAFSFSASIGHVFVA 3455309
>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full
insert sequence
Length = 1338
Score = 145 bits (312), Expect = 4e-033
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A + CP+D+LK+ ACVD+L GL+H+ IG +KCCPL++G+ +L+AA+CLCTTIR +LL
Sbjct: 593 ATQRCPVDSLKIGACVDLLGGLVHVGIGDPVVNKCCPLLEGLVELEAAVCLCTTIRLKLL 772
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LL+TCGK+ P G+ C
Sbjct: 773 NINIYLPLALQLLLTCGKNPPPGYTC 850
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 145 bits (312), Expect = 4e-033
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A + CP+D+LK+ ACVD+L GL+H+ IG +KCCPL++G+ +L+AA+CLCTTIR +LL
Sbjct: 3309533 ATQRCPVDSLKIGACVDLLGGLVHVGIGDPVVNKCCPLLEGLVELEAAVCLCTTIRLKLL 3309712
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LL+TCGK+ P G+ C
Sbjct: 3309713 NINIYLPLALQLLLTCGKNPPPGYTC 3309790
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0416A11
Length = 171519
Score = 145 bits (312), Expect = 4e-033
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +1 / +3
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A + CP+D+LK+ ACVD+L GL+H+ IG +KCCPL++G+ +L+AA+CLCTTIR +LL
Sbjct: 126252 ATQRCPVDSLKIGACVDLLGGLVHVGIGDPVVNKCCPLLEGLVELEAAVCLCTTIRLKLL 126431
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LL+TCGK+ P G+ C
Sbjct: 126432 NINIYLPLALQLLLTCGKNPPPGYTC 126509
>gb|AACV01014669.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014669, whole
genome shotgun sequence
Length = 5817
Score = 145 bits (312), Expect = 4e-033
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +1 / -2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A + CP+D+LK+ ACVD+L GL+H+ IG +KCCPL++G+ +L+AA+CLCTTIR +LL
Sbjct: 5138 ATQRCPVDSLKIGACVDLLGGLVHVGIGDPVVNKCCPLLEGLVELEAAVCLCTTIRLKLL 4959
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LL+TCGK+ P G+ C
Sbjct: 4958 NINIYLPLALQLLLTCGKNPPPGYTC 4881
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 145 bits (312), Expect = 4e-033
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A + CP+D+LK+ ACVD+L GL+H+ IG +KCCPL++G+ +L+AA+CLCTTIR +LL
Sbjct: 7185746 ATQRCPVDSLKIGACVDLLGGLVHVGIGDPVVNKCCPLLEGLVELEAAVCLCTTIRLKLL 7185925
Query: 286 NINIYLPIALNLLITCGKHAPSGFQC 363
NINIYLP+AL LL+TCGK+ P G+ C
Sbjct: 7185926 NINIYLPLALQLLLTCGKNPPPGYTC 7186003
>gb|AU078327.1|AU078327 AU078327 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11111_3A, mRNA sequence
Length = 537
Score = 62.5 bits (130), Expect(4) = 5e-032
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1 / +1
Query: 262 TTIRARLLNINIYLPIALNLLITCGKH 342
TTIRARLLNINIYLP+AL LLITCGKH
Sbjct: 403 TTIRARLLNINIYLPVALELLITCGKH 483
Score = 61.6 bits (128), Expect(4) = 5e-032
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1 / +2
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQ 192
A +TCPID LKLNACVDVL GLIHLVIG+
Sbjct: 251 ATKTCPIDALKLNACVDVLGGLIHLVIGR 337
Score = 39.6 bits (80), Expect(4) = 5e-032
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1 / +1
Query: 190 QEARSKCCPLVQGVADLDAALCLCT 264
Q+AR+KCCPLVQGVAD L T
Sbjct: 334 QKARAKCCPLVQGVADWTPRSALTT 408
Score = 35.4 bits (71), Expect(4) = 5e-032
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 14 HHHHRTCHPTSPRRLGH 64
H HH TCHPTS RR H
Sbjct: 71 HLHHHTCHPTSRRRRRH 121
>gb|CD670796.1|CD670796 OsMR213 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 573
Score = 138 bits (297), Expect = 5e-031
Identities = 51/81 (62%), Positives = 68/81 (83%)
Frame = +1 / +1
Query: 106 AVRTCPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLL 285
A + CP+D+LK+ ACVD+L GL+H+ IG +KCCPL++G+A+L+AA+CLCTTIR +LL
Sbjct: 304 ATQRCPVDSLKIGACVDLLGGLVHVGIGDPVVNKCCPLLEGLAELEAAVCLCTTIRLKLL 483
Query: 286 NINIYLPIALNLLITCGKHAP 348
NINIYLP+AL LL+TCGK P
Sbjct: 484 NINIYLPLALQLLLTCGKTLP 546
>gb|CB660560.1|CB660560 OSJNEd02H15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02H15 3', mRNA sequence
Length = 716
Score = 116 bits (248), Expect(2) = 2e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / -3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +AR CCPL+ GVADLDAA CLCT I+A+ L +++
Sbjct: 639 CPVNTLKLLACVDALNGLVHAVVGAKARDTCCPLLSGVADLDAAFCLCTAIKAKALGVSL 460
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 459 VLPVAISVLV 430
Score = 30.4 bits (60), Expect(2) = 2e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -3
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 435 LVNECGKHVPSSFQC 391
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / +2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 8790371 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 8790550
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 8790551 VLPVAISVLV 8790580
Score = 85.4 bits (180), Expect(2) = 9e-021
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = +1 / -3
Query: 193 EARSKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPIALNLLITCGKHAPSGFQC 363
+A CCPLV+ +A L AA CLCT I+A++L+I+IY+PIAL LL+ CG P G+ C
Sbjct: 10494793 DAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIYIPIALKLLVNCGCDVPPGYTC 10494623
Score = 38.6 bits (78), Expect(2) = 9e-021
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1 / -3
Query: 115 TCPIDTLKLNACVDVLSGLIHL 180
TCPID LKL CVD+L +H+
Sbjct: 10494862 TCPIDALKLGVCVDLLGNEVHI 10494797
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 8790575 LVNECGKHVPSSFQC 8790619
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 116 bits (247), Expect(2) = 2e-026
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +1 / +1
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP+DTLKL ACVD L+GL+H V+G A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 982051 CPVDTLKLLACVDALNGLVHAVVGATAGDTCCPLLSGVADLDAALCLCTAIKAKALGLSL 982230
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 982231 VLPVAISVLV 982260
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / +1
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 992470 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 992649
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 992650 VLPVAISVLV 992679
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 992674 LVNECGKHVPSSFQC 992718
Score = 27.2 bits (53), Expect(2) = 2e-026
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 319 LLITCGKHAPSGFQC 363
L+ CGK+ PS FQC
Sbjct: 982255 LVNDCGKYVPSDFQC 982299
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
complete sequence
Length = 160484
Score = 116 bits (247), Expect(2) = 2e-026
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +1 / +2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP+DTLKL ACVD L+GL+H V+G A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 67520 CPVDTLKLLACVDALNGLVHAVVGATAGDTCCPLLSGVADLDAALCLCTAIKAKALGLSL 67699
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 67700 VLPVAISVLV 67729
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / +2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 77939 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 78118
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 78119 VLPVAISVLV 78148
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 78143 LVNECGKHVPSSFQC 78187
Score = 27.2 bits (53), Expect(2) = 2e-026
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 319 LLITCGKHAPSGFQC 363
L+ CGK+ PS FQC
Sbjct: 67724 LVNDCGKYVPSDFQC 67768
>gb|AACV01010468.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010468, whole
genome shotgun sequence
Length = 17647
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / -2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 7761 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 7582
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 7581 VLPVAISVLV 7552
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -2
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 7557 LVNECGKHVPSSFQC 7513
>gb|CB680925.1|CB680925 OSJNEf06H23.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf06H23 3', mRNA sequence
Length = 765
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / -3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 751 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 572
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 571 VLPVAISVLV 542
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -3
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 547 LVNECGKHVPSSFQC 503
>gb|CB679398.1|CB679398 OSJNEf02N18.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf02N18 5', mRNA sequence
Length = 705
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / +2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 251 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 430
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 431 VLPVAISVLV 460
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 455 LVNECGKHVPSSFQC 499
>gb|CB684926.1|CB684926 OSJNEf14O16.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14O16 3', mRNA sequence
Length = 697
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / -2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 651 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 472
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 471 VLPVAISVLV 442
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -2
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 447 LVNECGKHVPSSFQC 403
>gb|CB678992.1|CB678992 OSJNEf01P14.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf01P14 3', mRNA sequence
Length = 689
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / -3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 636 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 457
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 456 VLPVAISVLV 427
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -3
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 432 LVNECGKHVPSSFQC 388
>gb|CB683325.1|CB683325 OSJNEf11J01.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11J01 3', mRNA sequence
Length = 671
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / -1
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 644 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 465
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 464 VLPVAISVLV 435
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 440 LVNECGKHVPSSFQC 396
>gb|CB681355.1|CB681355 OSJNEf07H22.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf07H22 3', mRNA sequence
Length = 643
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / -2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 609 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 430
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 429 VLPVAISVLV 400
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -2
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 405 LVNECGKHVPSSFQC 361
>gb|CA754554.1|CA754554 BR030001000_PLATE_F03_22_029.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030001000_PLATE_F03_22_029.ab1 similar to proline rich
protein homolog WCOR518 - wheat (fragment)
gi|1657851|gb|AAB18205.1| (U73214) cold acclimation
protein WCOR518 [Triticum aestivum], mRNA sequence
Length = 624
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / +2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 245 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 424
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 425 VLPVAISVLV 454
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 449 LVNECGKHVPSSFQC 493
>ref|XM_473863.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 465
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / +1
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 208 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 387
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 388 VLPVAISVLV 417
Score = 30.4 bits (60), Expect(2) = 3e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 412 LVNECGKHVPSSFQC 456
>gb|CB659556.1|CB659556 OSJNEc16K08.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16K08 5', mRNA sequence
Length = 869
Score = 116 bits (247), Expect(2) = 2e-026
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +1 / +2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP+DTLKL ACVD L+GL+H V+G A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 356 CPVDTLKLLACVDALNGLVHAVVGATAGDTCCPLLSGVADLDAALCLCTAIKAKALGLSL 535
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 536 VLPVAISVLV 565
Score = 27.2 bits (53), Expect(2) = 2e-026
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 319 LLITCGKHAPSGFQC 363
L+ CGK+ PS FQC
Sbjct: 560 LVNDCGKYVPSDFQC 604
>ref|XM_473862.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 609
Score = 116 bits (247), Expect(2) = 2e-026
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +1 / +1
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP+DTLKL ACVD L+GL+H V+G A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 334 CPVDTLKLLACVDALNGLVHAVVGATAGDTCCPLLSGVADLDAALCLCTAIKAKALGLSL 513
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 514 VLPVAISVLV 543
Score = 27.2 bits (53), Expect(2) = 2e-026
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 319 LLITCGKHAPSGFQC 363
L+ CGK+ PS FQC
Sbjct: 538 LVNDCGKYVPSDFQC 582
>gb|CB680452.1|CB680452 OSJNEf05D04.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf05D04 3', mRNA sequence
Length = 527
Score = 105 bits (224), Expect(2) = 3e-024
Identities = 38/67 (56%), Positives = 55/67 (82%)
Frame = +1 / -3
Query: 127 DTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINIYLP 306
+T+KL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++ LP
Sbjct: 486 NTVKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSLVLP 307
Query: 307 IALNLLI 327
+A+++L+
Sbjct: 306 VAMSVLV 286
Score = 30.4 bits (60), Expect(2) = 3e-024
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -3
Query: 319 LLITCGKHAPSGFQC 363
L+ CGKH PS FQC
Sbjct: 291 LVNECGKHVPSSFQC 247
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010
genomic scaffold, whole genome shotgun sequence
Length = 13858245
Score = 108 bits (230), Expect(2) = 4e-024
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +1
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 205117 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 205296
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 205297 NLPINLSLLV 205326
Score = 27.2 bits (53), Expect(2) = 4e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 331 CGKHAPSGFQC 363
CG+ PSGFQC
Sbjct: 205333 CGRSVPSGFQC 205365
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 108 bits (230), Expect(2) = 4e-024
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 198711 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 198890
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 198891 NLPINLSLLV 198920
Score = 27.2 bits (53), Expect(2) = 4e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 331 CGKHAPSGFQC 363
CG+ PSGFQC
Sbjct: 198927 CGRSVPSGFQC 198959
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 116 bits (247), Expect = 4e-024
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +1 / +3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP+DTLKL ACVD L+GL+H V+G A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 31085439 CPVDTLKLLACVDALNGLVHAVVGATAGDTCCPLLSGVADLDAALCLCTAIKAKALGLSL 31085618
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 31085619 VLPVAISVLV 31085648
Score = 115 bits (246), Expect = 5e-024
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / +3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 31095858 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 31096037
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 31096038 VLPVAISVLV 31096067
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
Length = 162241
Score = 108 bits (230), Expect(2) = 4e-024
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / -2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 63945 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 63766
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 63765 NLPINLSLLV 63736
Score = 27.2 bits (53), Expect(2) = 4e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 331 CGKHAPSGFQC 363
CG+ PSGFQC
Sbjct: 63729 CGRSVPSGFQC 63697
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAb0079B22, from chromosome 3, complete sequence
Length = 156933
Score = 108 bits (230), Expect(2) = 4e-024
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 132711 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 132890
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 132891 NLPINLSLLV 132920
Score = 27.2 bits (53), Expect(2) = 4e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 331 CGKHAPSGFQC 363
CG+ PSGFQC
Sbjct: 132927 CGRSVPSGFQC 132959
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBb0080O10, from chromosome 3, complete sequence
Length = 127917
Score = 108 bits (230), Expect(2) = 4e-024
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 35778 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 35957
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 35958 NLPINLSLLV 35987
Score = 27.2 bits (53), Expect(2) = 4e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 331 CGKHAPSGFQC 363
CG+ PSGFQC
Sbjct: 35994 CGRSVPSGFQC 36026
>gb|AACV01005727.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005727, whole
genome shotgun sequence
Length = 11983
Score = 108 bits (230), Expect(2) = 4e-024
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / -3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 11480 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 11301
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 11300 NLPINLSLLV 11271
Score = 27.2 bits (53), Expect(2) = 4e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -3
Query: 331 CGKHAPSGFQC 363
CG+ PSGFQC
Sbjct: 11264 CGRSVPSGFQC 11232
>gb|CB679733.1|CB679733 OSJNEf03J15.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03J15 3', mRNA sequence
Length = 806
Score = 108 bits (230), Expect(2) = 4e-024
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / -3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 618 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 439
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 438 NLPINLSLLV 409
Score = 27.2 bits (53), Expect(2) = 4e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -3
Query: 331 CGKHAPSGFQC 363
CG+ PSGFQC
Sbjct: 402 CGRSVPSGFQC 370
>gb|CB679732.1|CB679732 OSJNEf03J15.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03J15 5', mRNA sequence
Length = 643
Score = 108 bits (230), Expect(2) = 4e-024
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 24 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 203
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 204 NLPINLSLLV 233
Score = 27.2 bits (53), Expect(2) = 4e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 331 CGKHAPSGFQC 363
CG+ PSGFQC
Sbjct: 240 CGRSVPSGFQC 272
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 115 bits (246), Expect = 5e-024
Identities = 41/70 (58%), Positives = 58/70 (82%)
Frame = +1 / +3
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CP++TLKL ACVD L+GL+H V+G +A CCPL+ GVADLDAALCLCT I+A+ L +++
Sbjct: 27934470 CPVNTLKLLACVDALNGLVHAVVGAKASDTCCPLLSGVADLDAALCLCTAIKAKALGVSL 27934649
Query: 298 YLPIALNLLI 327
LP+A+++L+
Sbjct: 27934650 VLPVAISVLV 27934679
>gb|AU082168.1|AU082168 AU082168 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10510, mRNA sequence
Length = 413
Score = 108 bits (230), Expect = 9e-022
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 191 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 370
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 371 NLPINLSLLV 400
>gb|AU082336.1|AU082336 AU082336 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50579, mRNA sequence
Length = 517
Score = 108 bits (230), Expect = 9e-022
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +1
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 295 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 474
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 475 NLPINLSLLV 504
>gb|AU097615.1|AU097615 AU097615 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30638, mRNA sequence
Length = 472
Score = 108 bits (230), Expect = 9e-022
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +1
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 256 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 435
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 436 NLPINLSLLV 465
>gb|AU108185.1|AU108185 AU108185 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20248, mRNA sequence
Length = 327
Score = 108 bits (230), Expect = 9e-022
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +2
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 116 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 295
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 296 NLPINLSLLV 325
>gb|AU161779.1|AU161779 AU161779 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S5454, mRNA sequence
Length = 367
Score = 108 bits (230), Expect = 9e-022
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +1
Query: 118 CPIDTLKLNACVDVLSGLIHLVIGQEARSKCCPLVQGVADLDAALCLCTTIRARLLNINI 297
CPIDTLKL C +VL+GLI++ +G R CC L+QG+ADL+AA+CLCT +RA +L IN+
Sbjct: 151 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 330
Query: 298 YLPIALNLLI 327
LPI L+LL+
Sbjct: 331 NLPINLSLLV 360
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,087,893,648
Number of Sequences: 438736
Number of extensions: 54160839
Number of successful extensions: 368132
Number of sequences better than 1.0e-020: 80
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 170626521628
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)