TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619146.2.1
(636 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA... 181 8e-044
dbj|AK058915.1| Oryza sativa (japonica cultivar-group) cDNA... 179 3e-043
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 108 3e-041
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 108 3e-041
emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC O... 108 3e-041
emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Parti... 108 3e-041
gb|AACV01025516.1| Oryza sativa (japonica cultivar-group) c... 108 3e-041
dbj|AK060584.1| Oryza sativa (japonica cultivar-group) cDNA... 157 1e-036
dbj|AK101425.1| Oryza sativa (japonica cultivar-group) cDNA... 157 1e-036
dbj|AK103284.1| Oryza sativa (japonica cultivar-group) cDNA... 157 1e-036
ref|NT_079918.2| Oryza sativa (japonica cultivar-group) 95 8e-034
gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic ... 95 9e-034
gb|AACV01007440.1| Oryza sativa (japonica cultivar-group) c... 95 9e-034
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 95 3e-032
dbj|AK102603.1| Oryza sativa (japonica cultivar-group) cDNA... 133 1e-030
gb|AY423716.1| Oryza sativa (japonica cultivar-group) homeo... 133 1e-030
dbj|AK102830.1| Oryza sativa (japonica cultivar-group) cDNA... 133 1e-030
ref|NM_197030.1| Oryza sativa (japonica cultivar-group) put... 133 1e-030
dbj|AK102378.1| Oryza sativa (japonica cultivar-group) cDNA... 130 9e-030
gb|AY425991.1| Oryza sativa (japonica cultivar-group) homeo... 130 9e-030
dbj|AK059498.1| Oryza sativa (japonica cultivar-group) cDNA... 130 9e-030
ref|XM_468564.1| Oryza sativa (japonica cultivar-group), p... 129 2e-029
ref|NM_188279.1| Oryza sativa (japonica cultivar-group), p... 116 2e-029
dbj|AK112091.1| Oryza sativa (japonica cultivar-group) cDNA... 116 2e-029
emb|AJ556802.1|OSA556802 Oryza sativa (japonica cultivar-gr... 110 9e-024
gb|AU173356.1|AU173356 AU173356 Rice root Oryza sativa (jap... 102 9e-024
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-023
gb|AC105733.2| Oryza sativa (japonica cultivar-group) chrom... 74 1e-023
gb|AACV01005752.1| Oryza sativa (japonica cultivar-group) c... 74 1e-023
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 108 7e-022
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 108 7e-022
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 108 7e-022
>dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M14, full
insert sequence
Length = 3140
Score = 181 bits (389), Expect = 8e-044
Identities = 73/115 (63%), Positives = 87/115 (75%)
Frame = -3 / +3
Query: 625 LCCSLKPPAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLA 446
+ C PA FAN+AG DILETT+VN+QD+ LE +LD+EG+KAL ++ P IMQQG
Sbjct: 2523 ILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQGFT 2702
Query: 445 YLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRSAAP 281
YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H P
Sbjct: 2703 YLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGFQLP 2867
Score = 147 bits (315), Expect(2) = 2e-034
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = +3 / -2
Query: 312 MKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARPCCMIAGSCADRA 491
MKVQL SM AR CGA SS TFHATACSYDACRPMLDL TPPGR +PCCMI G+ A
Sbjct: 2836 MKVQLTSMKARQCGASSSLRTFHATACSYDACRPMLDLQTPPGR*VKPCCMILGNSEHSA 2657
Query: 492 FWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKAG 605
F P W T VVSRMS+PALLA +++ AG
Sbjct: 2656 FRPSSSRIISSEMSWRLTSVVSRMSRPALLAKVNIGAG 2543
Score = 143 bits (307), Expect = 2e-032
Identities = 64/114 (56%), Positives = 79/114 (69%)
Frame = +2 / -1
Query: 263 KRRHPVWRCRAMLRASDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGE 442
K + W+ M S EGPV EHE +A+R VVA +LPRH LL+R LPPHAR A A+ E
Sbjct: 2885 KSKSTSWKLETMDGGSHEGPVDEHEGEAVRRVVVAKNLPRHRLLIRCLPPHARLADASRE 2706
Query: 443 VRQALLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERESR 604
+ + LLHD GELR Q L AL+++D L+R VL+V RRL+DVEAG VGE E SR
Sbjct: 2705 IGETLLHDLGELRAQRLPALVIQDHLERDVLEVDQRRLKDVEAGIVGEGEHRSR 2544
Score = 22.6 bits (43), Expect(2) = 2e-034
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / -2
Query: 606 GFREQQSIAS 635
GFREQ SIAS
Sbjct: 2545 GFREQHSIAS 2516
>dbj|AK058915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A07, full
insert sequence
Length = 1011
Score = 179 bits (385), Expect = 3e-043
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -3 / +1
Query: 625 LCCSLKPPAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLA 446
+ C PA FAN+AG DILETT+VN+QD+ LE +LD+EG+K L ++ P IMQQG
Sbjct: 445 ILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKTLCSEFPKIMQQGFT 624
Query: 445 YLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRSAAP 281
YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H P
Sbjct: 625 YLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGFQLP 789
Score = 145 bits (311), Expect(2) = 7e-034
Identities = 60/98 (61%), Positives = 66/98 (67%)
Frame = +3 / -2
Query: 312 MKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARPCCMIAGSCADRA 491
MKVQL SM AR CGA SS TFHATACSYDACRPMLDL TPPGR +PCCMI G+
Sbjct: 758 MKVQLTSMKARQCGASSSLRTFHATACSYDACRPMLDLQTPPGR*VKPCCMILGNSEHSV 579
Query: 492 FWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKAG 605
F P W T VVSRMS+PALLA +++ AG
Sbjct: 578 FRPSSSRIISSEMSWRLTSVVSRMSRPALLAKVNIGAG 465
Score = 143 bits (307), Expect = 2e-032
Identities = 64/114 (56%), Positives = 79/114 (69%)
Frame = +2 / -1
Query: 263 KRRHPVWRCRAMLRASDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGE 442
K + W+ M S EGPV EHE +A+R VVA +LPRH LL+R LPPHAR A A+ E
Sbjct: 807 KSKSTSWKLETMDGGSHEGPVDEHEGEAVRRVVVAKNLPRHRLLIRCLPPHARLADASRE 628
Query: 443 VRQALLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERESR 604
+ + LLHD GELR Q L AL+++D L+R VL+V RRL+DVEAG VGE E SR
Sbjct: 627 IGETLLHDLGELRAQRLPALVIQDHLERDVLEVDQRRLKDVEAGIVGEGEHRSR 466
Score = 22.6 bits (43), Expect(2) = 7e-034
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / -2
Query: 606 GFREQQSIAS 635
GFREQ SIAS
Sbjct: 467 GFREQHSIAS 438
>gb|CH401282.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000119 genomic
scaffold, whole genome shotgun sequence
Length = 4546750
Score = 108 bits (230), Expect(3) = 3e-041
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -3 / -1
Query: 469 AIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRS 290
+I QG YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H
Sbjct: 2976982 SIFFQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGF 2976803
Query: 289 AAP 281
P
Sbjct: 2976802 QLP 2976794
Score = 94.5 bits (200), Expect(2) = 1e-033
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +3 / +3
Query: 312 MKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARP 455
MKVQL SM AR CGA SS TFHATACSYDACRPMLDL TPPGR +P
Sbjct: 2976825 MKVQLTSMKARQCGASSSLRTFHATACSYDACRPMLDLQTPPGR*VKP 2976968
Score = 79.9 bits (168), Expect(2) = 3e-024
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +2 / +2
Query: 263 KRRHPVWRCRAMLRASDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGE 442
K + W+ M S EGPV EHE +A+R VVA +LPRH LL+R LPPHAR A A+ E
Sbjct: 2976776 KSKSTSWKLETMDGGSHEGPVDEHEGEAVRRVVVAKNLPRHRLLIRCLPPHARLADASRE 2976955
Query: 443 VRQALLHDR 469
+ + L DR
Sbjct: 2976956 IGETLKEDR 2976982
Score = 77.1 bits (162), Expect(3) = 3e-041
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -3 / -2
Query: 604 PAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQ 455
PA FAN+AG DILETT+VN+QD+ LE +LD+EG+KAL ++ P IMQQ
Sbjct: 2977233 PAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 2977084
Score = 72.5 bits (152), Expect(2) = 1e-033
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2 / +1
Query: 455 LLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERESR 604
LLHD GELR Q L AL+++D L+R VL+V RRL+DVEAG VGE E SR
Sbjct: 2977084 LLHDLGELRAQRLPALVIQDHLERDVLEVDQRRLKDVEAGIVGEGEHRSR 2977233
Score = 55.6 bits (115), Expect(2) = 3e-024
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3 / +2
Query: 456 CCMIAGSCADRAFWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKAG 605
CCMI G+ AF P W T VVSRMS+PALLA +++ AG
Sbjct: 2977085 CCMILGNSEHSAFRPSSSRIISSEMSWRLTSVVSRMSRPALLAKVNIGAG 2977234
Score = 25.4 bits (49), Expect(3) = 3e-041
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 634 DAILCCSLK 608
DAILCCSLK
Sbjct: 2977352 DAILCCSLK 2977326
>ref|NT_107152.1| Oryza sativa (japonica cultivar-group)
Length = 2853905
Score = 108 bits (230), Expect(3) = 3e-041
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -3 / -3
Query: 469 AIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRS 290
+I QG YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H
Sbjct: 2126265 SIFFQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGF 2126086
Query: 289 AAP 281
P
Sbjct: 2126085 QLP 2126077
Score = 94.5 bits (200), Expect(2) = 1e-033
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +3 / +2
Query: 312 MKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARP 455
MKVQL SM AR CGA SS TFHATACSYDACRPMLDL TPPGR +P
Sbjct: 2126108 MKVQLTSMKARQCGASSSLRTFHATACSYDACRPMLDLQTPPGR*VKP 2126251
Score = 79.9 bits (168), Expect(2) = 3e-024
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +2 / +1
Query: 263 KRRHPVWRCRAMLRASDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGE 442
K + W+ M S EGPV EHE +A+R VVA +LPRH LL+R LPPHAR A A+ E
Sbjct: 2126059 KSKSTSWKLETMDGGSHEGPVDEHEGEAVRRVVVAKNLPRHRLLIRCLPPHARLADASRE 2126238
Query: 443 VRQALLHDR 469
+ + L DR
Sbjct: 2126239 IGETLKEDR 2126265
Score = 77.1 bits (162), Expect(3) = 3e-041
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -3 / -1
Query: 604 PAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQ 455
PA FAN+AG DILETT+VN+QD+ LE +LD+EG+KAL ++ P IMQQ
Sbjct: 2126516 PAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 2126367
Score = 72.5 bits (152), Expect(2) = 1e-033
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2 / +3
Query: 455 LLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERESR 604
LLHD GELR Q L AL+++D L+R VL+V RRL+DVEAG VGE E SR
Sbjct: 2126367 LLHDLGELRAQRLPALVIQDHLERDVLEVDQRRLKDVEAGIVGEGEHRSR 2126516
Score = 55.6 bits (115), Expect(2) = 3e-024
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3 / +1
Query: 456 CCMIAGSCADRAFWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKAG 605
CCMI G+ AF P W T VVSRMS+PALLA +++ AG
Sbjct: 2126368 CCMILGNSEHSAFRPSSSRIISSEMSWRLTSVVSRMSRPALLAKVNIGAG 2126517
Score = 25.4 bits (49), Expect(3) = 3e-041
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 634 DAILCCSLK 608
DAILCCSLK
Sbjct: 2126635 DAILCCSLK 2126609
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 161806
Score = 108 bits (230), Expect(3) = 3e-041
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -3 / +3
Query: 469 AIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRS 290
+I QG YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H
Sbjct: 157002 SIFFQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGF 157181
Query: 289 AAP 281
P
Sbjct: 157182 QLP 157190
Score = 94.5 bits (200), Expect(2) = 1e-033
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +3 / -1
Query: 312 MKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARP 455
MKVQL SM AR CGA SS TFHATACSYDACRPMLDL TPPGR +P
Sbjct: 157159 MKVQLTSMKARQCGASSSLRTFHATACSYDACRPMLDLQTPPGR*VKP 157016
Score = 79.9 bits (168), Expect(2) = 3e-024
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +2 / -3
Query: 263 KRRHPVWRCRAMLRASDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGE 442
K + W+ M S EGPV EHE +A+R VVA +LPRH LL+R LPPHAR A A+ E
Sbjct: 157208 KSKSTSWKLETMDGGSHEGPVDEHEGEAVRRVVVAKNLPRHRLLIRCLPPHARLADASRE 157029
Query: 443 VRQALLHDR 469
+ + L DR
Sbjct: 157028 IGETLKEDR 157002
Score = 77.1 bits (162), Expect(3) = 3e-041
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -3 / +1
Query: 604 PAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQ 455
PA FAN+AG DILETT+VN+QD+ LE +LD+EG+KAL ++ P IMQQ
Sbjct: 156751 PAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 156900
Score = 72.5 bits (152), Expect(2) = 1e-033
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2 / -2
Query: 455 LLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERESR 604
LLHD GELR Q L AL+++D L+R VL+V RRL+DVEAG VGE E SR
Sbjct: 156900 LLHDLGELRAQRLPALVIQDHLERDVLEVDQRRLKDVEAGIVGEGEHRSR 156751
Score = 55.6 bits (115), Expect(2) = 3e-024
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3 / -3
Query: 456 CCMIAGSCADRAFWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKAG 605
CCMI G+ AF P W T VVSRMS+PALLA +++ AG
Sbjct: 156899 CCMILGNSEHSAFRPSSSRIISSEMSWRLTSVVSRMSRPALLAKVNIGAG 156750
Score = 25.4 bits (49), Expect(3) = 3e-041
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +2
Query: 634 DAILCCSLK 608
DAILCCSLK
Sbjct: 156632 DAILCCSLK 156658
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of
library Monsanto from chromosome 12 of cultivar Nipponbare
of ssp. japonica of Oryza sativa (rice), complete sequence
Length = 61296
Score = 108 bits (230), Expect(3) = 3e-041
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -3 / +3
Query: 469 AIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRS 290
+I QG YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H
Sbjct: 20622 SIFFQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGF 20801
Query: 289 AAP 281
P
Sbjct: 20802 QLP 20810
Score = 94.5 bits (200), Expect(2) = 1e-033
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +3 / -3
Query: 312 MKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARP 455
MKVQL SM AR CGA SS TFHATACSYDACRPMLDL TPPGR +P
Sbjct: 20779 MKVQLTSMKARQCGASSSLRTFHATACSYDACRPMLDLQTPPGR*VKP 20636
Score = 79.9 bits (168), Expect(2) = 3e-024
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +2 / -2
Query: 263 KRRHPVWRCRAMLRASDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGE 442
K + W+ M S EGPV EHE +A+R VVA +LPRH LL+R LPPHAR A A+ E
Sbjct: 20828 KSKSTSWKLETMDGGSHEGPVDEHEGEAVRRVVVAKNLPRHRLLIRCLPPHARLADASRE 20649
Query: 443 VRQALLHDR 469
+ + L DR
Sbjct: 20648 IGETLKEDR 20622
Score = 77.1 bits (162), Expect(3) = 3e-041
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -3 / +1
Query: 604 PAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQ 455
PA FAN+AG DILETT+VN+QD+ LE +LD+EG+KAL ++ P IMQQ
Sbjct: 20371 PAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 20520
Score = 72.5 bits (152), Expect(2) = 1e-033
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2 / -1
Query: 455 LLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERESR 604
LLHD GELR Q L AL+++D L+R VL+V RRL+DVEAG VGE E SR
Sbjct: 20520 LLHDLGELRAQRLPALVIQDHLERDVLEVDQRRLKDVEAGIVGEGEHRSR 20371
Score = 55.6 bits (115), Expect(2) = 3e-024
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3 / -2
Query: 456 CCMIAGSCADRAFWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKAG 605
CCMI G+ AF P W T VVSRMS+PALLA +++ AG
Sbjct: 20519 CCMILGNSEHSAFRPSSSRIISSEMSWRLTSVVSRMSRPALLAKVNIGAG 20370
Score = 25.4 bits (49), Expect(3) = 3e-041
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +2
Query: 634 DAILCCSLK 608
DAILCCSLK
Sbjct: 20252 DAILCCSLK 20278
>gb|AACV01025516.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025516, whole
genome shotgun sequence
Length = 38783
Score = 108 bits (230), Expect(3) = 3e-041
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -3 / +1
Query: 469 AIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRS 290
+I QG YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H
Sbjct: 24685 SIFFQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGF 24864
Query: 289 AAP 281
P
Sbjct: 24865 QLP 24873
Score = 94.5 bits (200), Expect(2) = 1e-033
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +3 / -1
Query: 312 MKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARP 455
MKVQL SM AR CGA SS TFHATACSYDACRPMLDL TPPGR +P
Sbjct: 24842 MKVQLTSMKARQCGASSSLRTFHATACSYDACRPMLDLQTPPGR*VKP 24699
Score = 79.9 bits (168), Expect(2) = 3e-024
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +2 / -3
Query: 263 KRRHPVWRCRAMLRASDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGE 442
K + W+ M S EGPV EHE +A+R VVA +LPRH LL+R LPPHAR A A+ E
Sbjct: 24891 KSKSTSWKLETMDGGSHEGPVDEHEGEAVRRVVVAKNLPRHRLLIRCLPPHARLADASRE 24712
Query: 443 VRQALLHDR 469
+ + L DR
Sbjct: 24711 IGETLKEDR 24685
Score = 77.1 bits (162), Expect(3) = 3e-041
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -3 / +2
Query: 604 PAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQ 455
PA FAN+AG DILETT+VN+QD+ LE +LD+EG+KAL ++ P IMQQ
Sbjct: 24434 PAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 24583
Score = 72.5 bits (152), Expect(2) = 1e-033
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2 / -2
Query: 455 LLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERESR 604
LLHD GELR Q L AL+++D L+R VL+V RRL+DVEAG VGE E SR
Sbjct: 24583 LLHDLGELRAQRLPALVIQDHLERDVLEVDQRRLKDVEAGIVGEGEHRSR 24434
Score = 55.6 bits (115), Expect(2) = 3e-024
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3 / -3
Query: 456 CCMIAGSCADRAFWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKAG 605
CCMI G+ AF P W T VVSRMS+PALLA +++ AG
Sbjct: 24582 CCMILGNSEHSAFRPSSSRIISSEMSWRLTSVVSRMSRPALLAKVNIGAG 24433
Score = 25.4 bits (49), Expect(3) = 3e-041
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 634 DAILCCSLK 608
DAILCCSLK
Sbjct: 24315 DAILCCSLK 24341
>dbj|AK060584.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H08, full
insert sequence
Length = 1875
Score = 157 bits (337), Expect = 1e-036
Identities = 62/106 (58%), Positives = 76/106 (71%)
Frame = -3 / +2
Query: 625 LCCSLKPPAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLA 446
+ C A FAN AG D+LETT++ +QD+ LE +LD++G+KAL + P IMQQG A
Sbjct: 1394 IMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFA 1573
Query: 445 YLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
YLPGGVC SSMGR SYEQAVAWKV+ DD P CLA M NW+F+*
Sbjct: 1574 YLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 1711
Score = 122 bits (262), Expect = 3e-026
Identities = 58/98 (59%), Positives = 68/98 (69%)
Frame = +2 / -3
Query: 308 SDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGEVRQALLHDRGELRGQ 487
SDE PV EHE +A+R VVA LPRH LLVR PPHAR AHA EV + LLHD GEL
Sbjct: 1711 SDE*PVDEHEGEAVRRVVVAQDLPRHRLLVRHRPPHARHAHAAREVGETLLHDLGELCT* 1532
Query: 488 GLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERES 601
L A++++D L+R VL+ + RRLQ VEAG VGE E S
Sbjct: 1531 CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRS 1418
Score = 121 bits (258), Expect = 1e-025
Identities = 52/98 (53%), Positives = 58/98 (59%)
Frame = +3 / -1
Query: 309 QMKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARPCCMIAGSCADR 488
Q QL +M AR CG SS TFHATACSYD RPMLD HTPPGR A+PCCMI G+
Sbjct: 1710 QTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPCCMILGNSVHS 1531
Query: 489 AFWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKA 602
AF P W VVS MS+PA LA ++ A
Sbjct: 1530 AFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTGA 1417
>dbj|AK101425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038E17, full
insert sequence
Length = 1165
Score = 157 bits (337), Expect = 1e-036
Identities = 62/106 (58%), Positives = 76/106 (71%)
Frame = -3 / +1
Query: 625 LCCSLKPPAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLA 446
+ C A FAN AG D+LETT++ +QD+ LE +LD++G+KAL + P IMQQG A
Sbjct: 709 IMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFA 888
Query: 445 YLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
YLPGGVC SSMGR SYEQAVAWKV+ DD P CLA M NW+F+*
Sbjct: 889 YLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 1026
Score = 122 bits (262), Expect = 3e-026
Identities = 58/98 (59%), Positives = 68/98 (69%)
Frame = +2 / -2
Query: 308 SDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGEVRQALLHDRGELRGQ 487
SDE PV EHE +A+R VVA LPRH LLVR PPHAR AHA EV + LLHD GEL
Sbjct: 1026 SDE*PVDEHEGEAVRRVVVAQDLPRHRLLVRHRPPHARHAHAAREVGETLLHDLGELCT* 847
Query: 488 GLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERES 601
L A++++D L+R VL+ + RRLQ VEAG VGE E S
Sbjct: 846 CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRS 733
Score = 121 bits (258), Expect = 1e-025
Identities = 52/98 (53%), Positives = 58/98 (59%)
Frame = +3 / -3
Query: 309 QMKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARPCCMIAGSCADR 488
Q QL +M AR CG SS TFHATACSYD RPMLD HTPPGR A+PCCMI G+
Sbjct: 1025 QTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPCCMILGNSVHS 846
Query: 489 AFWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKA 602
AF P W VVS MS+PA LA ++ A
Sbjct: 845 AFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTGA 732
>dbj|AK103284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M18, full
insert sequence
Length = 3082
Score = 157 bits (337), Expect = 1e-036
Identities = 62/106 (58%), Positives = 76/106 (71%)
Frame = -3 / +1
Query: 625 LCCSLKPPAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLA 446
+ C A FAN AG D+LETT++ +QD+ LE +LD++G+KAL + P IMQQG A
Sbjct: 2608 IMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFA 2787
Query: 445 YLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
YLPGGVC SSMGR SYEQAVAWKV+ DD P CLA M NW+F+*
Sbjct: 2788 YLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 2925
Score = 122 bits (262), Expect = 3e-026
Identities = 58/98 (59%), Positives = 68/98 (69%)
Frame = +2 / -2
Query: 308 SDEGPVGEHERQALRGAVVAHHLPRHCLLVRRLPPHARPAHATGEVRQALLHDRGELRGQ 487
SDE PV EHE +A+R VVA LPRH LLVR PPHAR AHA EV + LLHD GEL
Sbjct: 2925 SDE*PVDEHEGEAVRRVVVAQDLPRHRLLVRHRPPHARHAHAAREVGETLLHDLGELCT* 2746
Query: 488 GLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERES 601
L A++++D L+R VL+ + RRLQ VEAG VGE E S
Sbjct: 2745 CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRS 2632
Score = 121 bits (258), Expect = 1e-025
Identities = 52/98 (53%), Positives = 58/98 (59%)
Frame = +3 / -3
Query: 309 QMKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARPCCMIAGSCADR 488
Q QL +M AR CG SS TFHATACSYD RPMLD HTPPGR A+PCCMI G+
Sbjct: 2924 QTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPCCMILGNSVHS 2745
Query: 489 AFWPXXXXXXXXXXXWMFTIVVSRMSKPALLANLSVKA 602
AF P W VVS MS+PA LA ++ A
Sbjct: 2744 AFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTGA 2631
>ref|NT_079918.2| Oryza sativa (japonica cultivar-group)
Length = 553008
Score = 94.5 bits (200), Expect(3) = 8e-034
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3 / -2
Query: 457 QGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
QG AYLPGGVC SSMGR SYEQAVAWKV+ DD P CLA M NW+F+*
Sbjct: 456752 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 456603
Score = 81.3 bits (171), Expect(2) = 9e-025
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +3 / +1
Query: 309 QMKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARP 455
Q QL +M AR CG SS TFHATACSYD RPMLD HTPPGR A+P
Sbjct: 456604 QTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKP 456750
Score = 68.0 bits (142), Expect(3) = 8e-034
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = -3 / -1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLP 437
FAN AG D+LETT++ +QD+ LE +LD++G+KAL + P IMQQ +P
Sbjct: 456972 FANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQVWTIVP 456823
Score = 56.1 bits (116), Expect(2) = 9e-025
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 455 LLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERES 601
LLHD GEL L A++++D L+R VL+ + RRLQ VEAG VGE E S
Sbjct: 456841 LLHDLGELCT*CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRS 456987
Score = 23.1 bits (44), Expect(3) = 8e-034
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 634 DAILCCSLK 608
D+I+CCSLK
Sbjct: 457114 DSIMCCSLK 457088
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence
Length = 175704
Score = 94.5 bits (200), Expect(3) = 9e-034
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3 / +2
Query: 457 QGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
QG AYLPGGVC SSMGR SYEQAVAWKV+ DD P CLA M NW+F+*
Sbjct: 96257 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 96406
Score = 81.3 bits (171), Expect(2) = 9e-025
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +3 / -1
Query: 309 QMKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARP 455
Q QL +M AR CG SS TFHATACSYD RPMLD HTPPGR A+P
Sbjct: 96405 QTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKP 96259
Score = 68.0 bits (142), Expect(3) = 9e-034
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = -3 / +1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLP 437
FAN AG D+LETT++ +QD+ LE +LD++G+KAL + P IMQQ +P
Sbjct: 96037 FANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQVWTIVP 96186
Score = 56.1 bits (116), Expect(2) = 9e-025
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +2 / -1
Query: 455 LLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERES 601
LLHD GEL L A++++D L+R VL+ + RRLQ VEAG VGE E S
Sbjct: 96168 LLHDLGELCT*CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRS 96022
Score = 23.1 bits (44), Expect(3) = 9e-034
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 634 DAILCCSLK 608
D+I+CCSLK
Sbjct: 95895 DSIMCCSLK 95921
>gb|AACV01007440.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007440, whole
genome shotgun sequence
Length = 11259
Score = 94.5 bits (200), Expect(3) = 9e-034
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3 / +2
Query: 457 QGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
QG AYLPGGVC SSMGR SYEQAVAWKV+ DD P CLA M NW+F+*
Sbjct: 4982 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 5131
Score = 81.3 bits (171), Expect(2) = 9e-025
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +3 / -1
Query: 309 QMKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARP 455
Q QL +M AR CG SS TFHATACSYD RPMLD HTPPGR A+P
Sbjct: 5130 QTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKP 4984
Score = 68.0 bits (142), Expect(3) = 9e-034
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = -3 / +1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLP 437
FAN AG D+LETT++ +QD+ LE +LD++G+KAL + P IMQQ +P
Sbjct: 4762 FANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQVWTIVP 4911
Score = 56.1 bits (116), Expect(2) = 9e-025
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +2 / -1
Query: 455 LLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERES 601
LLHD GEL L A++++D L+R VL+ + RRLQ VEAG VGE E S
Sbjct: 4893 LLHDLGELCT*CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRS 4747
Score = 23.1 bits (44), Expect(3) = 9e-034
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 634 DAILCCSLK 608
D+I+CCSLK
Sbjct: 4620 DSIMCCSLK 4646
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 94.5 bits (200), Expect(2) = 3e-032
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3 / -2
Query: 457 QGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
QG AYLPGGVC SSMGR SYEQAVAWKV+ DD P CLA M NW+F+*
Sbjct: 10968827 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 10968678
Score = 81.3 bits (171), Expect(2) = 9e-025
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +3 / +1
Query: 309 QMKVQLASMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARP 455
Q QL +M AR CG SS TFHATACSYD RPMLD HTPPGR A+P
Sbjct: 10968679 QTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKP 10968825
Score = 68.0 bits (142), Expect(2) = 3e-032
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = -3 / -1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLP 437
FAN AG D+LETT++ +QD+ LE +LD++G+KAL + P IMQQ +P
Sbjct: 10969047 FANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQVWTIVP 10968898
Score = 56.1 bits (116), Expect(2) = 9e-025
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 455 LLHDRGELRGQGLLALLVEDRLQRQVLDVHHRRLQDVEAGAVGELERES 601
LLHD GEL L A++++D L+R VL+ + RRLQ VEAG VGE E S
Sbjct: 10968916 LLHDLGELCT*CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRS 10969062
>dbj|AK102603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098N12, full
insert sequence
Length = 3227
Score = 133 bits (286), Expect(2) = 1e-030
Identities = 51/93 (54%), Positives = 68/93 (73%)
Frame = -3 / +2
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN G ++LET++V +QDL L+ + DE G+KAL ++P +M+QG YLPGGVC S MGR
Sbjct: 2597 FANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGR 2776
Query: 406 QASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
S+EQAVAWKV+G+D CLA NW+F+*
Sbjct: 2777 HVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 2875
Score = 23.5 bits (45), Expect(2) = 1e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +2
Query: 634 DAILCCSLK 608
DAILCCS K
Sbjct: 2552 DAILCCSFK 2578
>gb|AY423716.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper
protein Hox9 mRNA, complete cds
Length = 3174
Score = 133 bits (286), Expect(2) = 1e-030
Identities = 51/93 (54%), Positives = 68/93 (73%)
Frame = -3 / +3
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN G ++LET++V +QDL L+ + DE G+KAL ++P +M+QG YLPGGVC S MGR
Sbjct: 2526 FANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGR 2705
Query: 406 QASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
S+EQAVAWKV+G+D CLA NW+F+*
Sbjct: 2706 HVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 2804
Score = 23.5 bits (45), Expect(2) = 1e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +3
Query: 634 DAILCCSLK 608
DAILCCS K
Sbjct: 2481 DAILCCSFK 2507
>dbj|AK102830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109G06, full
insert sequence
Length = 3000
Score = 133 bits (286), Expect(2) = 1e-030
Identities = 51/93 (54%), Positives = 68/93 (73%)
Frame = -3 / +3
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN G ++LET++V +QDL L+ + DE G+KAL ++P +M+QG YLPGGVC S MGR
Sbjct: 2373 FANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGR 2552
Query: 406 QASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
S+EQAVAWKV+G+D CLA NW+F+*
Sbjct: 2553 HVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 2651
Score = 23.5 bits (45), Expect(2) = 1e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +3
Query: 634 DAILCCSLK 608
DAILCCS K
Sbjct: 2328 DAILCCSFK 2354
>ref|NM_197030.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine
zipper protein (OSJNBa0093B11.11), mRNA
Length = 2523
Score = 133 bits (286), Expect(2) = 1e-030
Identities = 51/93 (54%), Positives = 68/93 (73%)
Frame = -3 / +1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN G ++LET++V +QDL L+ + DE G+KAL ++P +M+QG YLPGGVC S MGR
Sbjct: 2245 FANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGR 2424
Query: 406 QASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
S+EQAVAWKV+G+D CLA NW+F+*
Sbjct: 2425 HVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 2523
Score = 23.5 bits (45), Expect(2) = 1e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 634 DAILCCSLK 608
DAILCCS K
Sbjct: 2200 DAILCCSFK 2226
>dbj|AK102378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091P14, full
insert sequence
Length = 3252
Score = 130 bits (279), Expect(2) = 9e-030
Identities = 50/95 (52%), Positives = 68/95 (71%)
Frame = -3 / +3
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN AG D+LET++V +QDL L+ + DE G++AL + +P +M+QG YLP GVC S MGR
Sbjct: 2652 FANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGR 2831
Query: 406 QASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GS 302
S++QAVAWKV+ +D CLA NW+F+* S
Sbjct: 2832 HVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV*PS 2936
Score = 23.5 bits (45), Expect(2) = 9e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +3
Query: 634 DAILCCSLK 608
DAILCCS K
Sbjct: 2607 DAILCCSFK 2633
>gb|AY425991.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper
protein Hox10 mRNA, complete cds
Length = 3252
Score = 130 bits (279), Expect(2) = 9e-030
Identities = 50/95 (52%), Positives = 68/95 (71%)
Frame = -3 / +3
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN AG D+LET++V +QDL L+ + DE G++AL + +P +M+QG YLP GVC S MGR
Sbjct: 2652 FANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGR 2831
Query: 406 QASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GS 302
S++QAVAWKV+ +D CLA NW+F+* S
Sbjct: 2832 HVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV*PS 2936
Score = 23.5 bits (45), Expect(2) = 9e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +3
Query: 634 DAILCCSLK 608
DAILCCS K
Sbjct: 2607 DAILCCSFK 2633
>dbj|AK059498.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H11, full
insert sequence
Length = 1573
Score = 130 bits (279), Expect(2) = 9e-030
Identities = 50/95 (52%), Positives = 68/95 (71%)
Frame = -3 / +2
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN AG D+LET++V +QDL L+ + DE G++AL + +P +M+QG YLP GVC S MGR
Sbjct: 989 FANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGR 1168
Query: 406 QASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GS 302
S++QAVAWKV+ +D CLA NW+F+* S
Sbjct: 1169 HVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV*PS 1273
Score = 23.5 bits (45), Expect(2) = 9e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +2
Query: 634 DAILCCSLK 608
DAILCCS K
Sbjct: 944 DAILCCSFK 970
>ref|XM_468564.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2574
Score = 129 bits (277), Expect(2) = 2e-029
Identities = 49/93 (52%), Positives = 67/93 (72%)
Frame = -3 / +1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN AG D+LET++V +QDL L+ + DE G++AL + +P +M+QG YLP GVC S MGR
Sbjct: 2296 FANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGR 2475
Query: 406 QASYEQAVAWKVVGDDGAPQCLALMLANWTFI* 308
S++QAVAWKV+ +D CLA NW+F+*
Sbjct: 2476 HVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 2574
Score = 23.5 bits (45), Expect(2) = 2e-029
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 634 DAILCCSLK 608
DAILCCS K
Sbjct: 2251 DAILCCSFK 2277
>ref|NM_188279.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2697
Score = 116 bits (248), Expect(3) = 2e-029
Identities = 47/77 (61%), Positives = 61/77 (79%)
Frame = -3 / +1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN +G D+LETT+V +QD+ LE V D++G+K L +LP IM+QG+A + GGVC SS+GR
Sbjct: 2416 FANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGR 2595
Query: 406 QASYEQAVAWKVVGDDG 356
ASYE+AVAWKVV DG
Sbjct: 2596 AASYEKAVAWKVVDGDG 2646
Score = 31.8 bits (63), Expect(3) = 2e-029
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3 / +1
Query: 373 VVGDDGAPQCLALMLANWTFI* 308
V GD G C+ M NWTF+*
Sbjct: 2632 VDGDGGGAHCICFMFINWTFL* 2697
Score = 22.6 bits (43), Expect(3) = 2e-029
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / +1
Query: 631 AILCCSLK 608
AILCCSLK
Sbjct: 2374 AILCCSLK 2397
>dbj|AK112091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A01, full
insert sequence
Length = 1429
Score = 116 bits (248), Expect(3) = 2e-029
Identities = 47/77 (61%), Positives = 61/77 (79%)
Frame = -3 / +3
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN +G D+LETT+V +QD+ LE V D++G+K L +LP IM+QG+A + GGVC SS+GR
Sbjct: 1017 FANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGR 1196
Query: 406 QASYEQAVAWKVVGDDG 356
ASYE+AVAWKVV DG
Sbjct: 1197 AASYEKAVAWKVVDGDG 1247
Score = 31.8 bits (63), Expect(3) = 2e-029
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3 / +3
Query: 373 VVGDDGAPQCLALMLANWTFI* 308
V GD G C+ M NWTF+*
Sbjct: 1233 VDGDGGGAHCICFMFINWTFL* 1298
Score = 22.6 bits (43), Expect(3) = 2e-029
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / +3
Query: 631 AILCCSLK 608
AILCCSLK
Sbjct: 975 AILCCSLK 998
>emb|AJ556802.1|OSA556802 Oryza sativa (japonica cultivar-group) partial mRNA for HD-ZIP
protein (hb1 gene)
Length = 1354
Score = 110 bits (235), Expect(2) = 9e-024
Identities = 42/76 (55%), Positives = 58/76 (76%)
Frame = -3 / +1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGR 407
FAN AG D+LET++V +QDL L+ + DE G++AL + +P +M+QG YLP GVC S MGR
Sbjct: 1123 FANKAGLDMLETSLVALQDLTLDRIFDEPGREALFSNIPKLMEQGHVYLPSGVCMSGMGR 1302
Query: 406 QASYEQAVAWKVVGDD 359
S++QAVAWKV+ +D
Sbjct: 1303 HVSFDQAVAWKVLTED 1350
Score = 23.5 bits (45), Expect(2) = 9e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 634 DAILCCSLK 608
DAILCCS K
Sbjct: 1078 DAILCCSFK 1104
>gb|AU173356.1|AU173356 AU173356 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2413, mRNA sequence
Length = 449
Score = 102 bits (217), Expect(2) = 9e-024
Identities = 42/68 (61%), Positives = 54/68 (79%)
Frame = -3 / +2
Query: 559 LETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGRQASYEQAVA 380
LETT+V +QD+ LE V D++G+K L +LP IM+QG+A + GGVC SS+GR ASYE+AVA
Sbjct: 2 LETTLVALQDMTLEKVXDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVA 181
Query: 379 WKVVGDDG 356
WKVV DG
Sbjct: 182 WKVVDGDG 205
Score = 31.8 bits (63), Expect(2) = 9e-024
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3 / +2
Query: 373 VVGDDGAPQCLALMLANWTFI* 308
V GD G C+ M NWTF+*
Sbjct: 191 VDGDGGGAHCICFMFINWTFL* 256
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010
genomic scaffold, whole genome shotgun sequence
Length = 13858245
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = -3 / +3
Query: 454 GLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GS 302
G YLP GVC S MGR S++QAVAWKV+ +D CLA NW+F+* S
Sbjct: 549591 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV*PS 549743
Score = 59.3 bits (123), Expect(2) = 1e-023
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = -3 / +1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQ 455
FAN AG D+LET++V +QDL L+ + DE G++AL + +P +M+Q
Sbjct: 549337 FANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQ 549468
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBb0043C10, complete sequence
Length = 108688
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = -3 / -3
Query: 454 GLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GS 302
G YLP GVC S MGR S++QAVAWKV+ +D CLA NW+F+* S
Sbjct: 80153 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV*PS 80001
Score = 59.3 bits (123), Expect(2) = 1e-023
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = -3 / -1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQ 455
FAN AG D+LET++V +QDL L+ + DE G++AL + +P +M+Q
Sbjct: 80407 FANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQ 80276
>gb|AACV01005752.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005752, whole
genome shotgun sequence
Length = 45615
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = -3 / -3
Query: 454 GLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GS 302
G YLP GVC S MGR S++QAVAWKV+ +D CLA NW+F+* S
Sbjct: 24841 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV*PS 24689
Score = 59.3 bits (123), Expect(2) = 1e-023
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = -3 / -1
Query: 586 FANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQ 455
FAN AG D+LET++V +QDL L+ + DE G++AL + +P +M+Q
Sbjct: 25095 FANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQ 24964
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 108 bits (230), Expect = 7e-022
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -3 / -1
Query: 469 AIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRS 290
+I QG YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H
Sbjct: 22160628 SIFFQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGF 22160449
Query: 289 AAP 281
P
Sbjct: 22160448 QLP 22160440
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 108 bits (230), Expect = 7e-022
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -3 / -1
Query: 469 AIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRS 290
+I QG YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H
Sbjct: 25954667 SIFFQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGF 25954488
Query: 289 AAP 281
P
Sbjct: 25954487 QLP 25954479
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 108 bits (230), Expect = 7e-022
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -3 / -3
Query: 469 AIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANWTFI*GSQHRS 290
+I QG YLPGGVC+SSMGRQASYEQAVAWKV+ DD AP CLA ML NWTF+* + H
Sbjct: 25882845 SIFFQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM*STIHGF 25882666
Query: 289 AAP 281
P
Sbjct: 25882665 QLP 25882657
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,743,373,106
Number of Sequences: 438736
Number of extensions: 59402147
Number of successful extensions: 427761
Number of sequences better than 1.0e-020: 41
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 138928072401
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)