TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493961.2.1
(733 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 162 8e-066
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 162 8e-066
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 162 8e-066
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 162 8e-066
dbj|AP005113.3| Oryza sativa (japonica cultivar-group) geno... 162 8e-066
gb|AACV01005315.1| Oryza sativa (japonica cultivar-group) c... 162 8e-066
dbj|AK108140.1| Oryza sativa (japonica cultivar-group) cDNA... 162 8e-066
ref|XM_467540.1| Oryza sativa (japonica cultivar-group), mRNA 162 8e-066
gb|CB672405.1|CB672405 OSJNEe06G18.r OSJNEe Oryza sativa (j... 162 8e-062
ref|NT_107130.1| Oryza sativa (japonica cultivar-group) 140 5e-051
gb|AC108224.6| Oryza sativa (japonica cultivar-group) chrom... 140 5e-051
gb|AC134053.4| Oryza sativa (japonica cultivar-group) chrom... 140 5e-051
gb|AU163941.1|AU163941 AU163941 Rice panicle at ripening st... 116 9e-044
gb|CO435684.1|CO435684 OsMR750 5MT resistant rice mutant cD... 99 3e-032
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 140 2e-031
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 140 2e-031
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 85 2e-029
gb|AACV01023345.1| Oryza sativa (japonica cultivar-group) c... 85 2e-029
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 59 7e-023
ref|NT_107151.1| Oryza sativa (japonica cultivar-group) 59 8e-023
emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC O... 59 8e-023
gb|AACV01023972.1| Oryza sativa (japonica cultivar-group) c... 59 9e-023
dbj|AK110842.1| Oryza sativa (japonica cultivar-group) cDNA... 59 9e-023
gb|AC152840.2| Oryza sativa (japonica cultivar-group) chrom... 107 1e-021
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 63 3e-021
dbj|AP004790.3| Oryza sativa (japonica cultivar-group) geno... 63 3e-021
gb|AACV01004560.1| Oryza sativa (japonica cultivar-group) c... 63 3e-021
dbj|AK100984.1| Oryza sativa (japonica cultivar-group) cDNA... 63 4e-021
ref|XM_466075.1| Oryza sativa (japonica cultivar-group), mRNA 63 4e-021
gb|CB669167.1|CB669167 OSJNEe01H08.r OSJNEe Oryza sativa (j... 63 4e-021
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 162 bits (348), Expect(2) = 8e-066
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -2 / +3
Query: 396 ETGVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASS 217
E+GV GWRRPFVTHFTGCQPCSG RNEHY+G SCD+G+RRAL+FADDQVLRAYGFRHA
Sbjct: 30026229 ESGVSGWRRPFVTHFTGCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAGP 30026408
Query: 216 LSDDVQPLPFDYPAK 172
LSD V PLPFD+P +
Sbjct: 30026409 LSDAVSPLPFDHPTQ 30026453
Score = 134 bits (288), Expect = 8e-030
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / -3
Query: 179 G*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKC 358
G SNGSG T+SLS AC PYALSTWSSAKLSARRMP SQL P *CS R PLHG HPVKC
Sbjct: 30026446 GWSNGSGLTASLSGPACRNPYALSTWSSAKLSARRMPSSQLFPV*CSFRWPLHGWHPVKC 30026267
Query: 359 VTNGRRHPCTXXXXXXXXXXXXFLATAY 442
VTNGRRHP T LA AY
Sbjct: 30026266 VTNGRRHPLTPLSASPAPASAASLAAAY 30026183
Score = 112 bits (240), Expect(2) = 8e-066
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -2 / +3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMER 496
DDQSALVYMLLQ GS WRDKV+LES YYFEGYW+EI GRL N+TERYEAMER
Sbjct: 30025980 DDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMER 30026135
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 162 bits (348), Expect(2) = 8e-066
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -2 / +3
Query: 396 ETGVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASS 217
E+GV GWRRPFVTHFTGCQPCSG RNEHY+G SCD+G+RRAL+FADDQVLRAYGFRHA
Sbjct: 30071373 ESGVSGWRRPFVTHFTGCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAGP 30071552
Query: 216 LSDDVQPLPFDYPAK 172
LSD V PLPFD+P +
Sbjct: 30071553 LSDAVSPLPFDHPTQ 30071597
Score = 134 bits (288), Expect = 8e-030
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / -1
Query: 179 G*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKC 358
G SNGSG T+SLS AC PYALSTWSSAKLSARRMP SQL P *CS R PLHG HPVKC
Sbjct: 30071590 GWSNGSGLTASLSGPACRNPYALSTWSSAKLSARRMPSSQLFPV*CSFRWPLHGWHPVKC 30071411
Query: 359 VTNGRRHPCTXXXXXXXXXXXXFLATAY 442
VTNGRRHP T LA AY
Sbjct: 30071410 VTNGRRHPLTPLSASPAPASAASLAAAY 30071327
Score = 112 bits (240), Expect(2) = 8e-066
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -2 / +3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMER 496
DDQSALVYMLLQ GS WRDKV+LES YYFEGYW+EI GRL N+TERYEAMER
Sbjct: 30071124 DDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMER 30071279
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 162 bits (348), Expect(2) = 8e-066
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -2 / +1
Query: 396 ETGVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASS 217
E+GV GWRRPFVTHFTGCQPCSG RNEHY+G SCD+G+RRAL+FADDQVLRAYGFRHA
Sbjct: 16573165 ESGVSGWRRPFVTHFTGCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAGP 16573344
Query: 216 LSDDVQPLPFDYPAK 172
LSD V PLPFD+P +
Sbjct: 16573345 LSDAVSPLPFDHPTQ 16573389
Score = 134 bits (288), Expect = 8e-030
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / -3
Query: 179 G*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKC 358
G SNGSG T+SLS AC PYALSTWSSAKLSARRMP SQL P *CS R PLHG HPVKC
Sbjct: 16573382 GWSNGSGLTASLSGPACRNPYALSTWSSAKLSARRMPSSQLFPV*CSFRWPLHGWHPVKC 16573203
Query: 359 VTNGRRHPCTXXXXXXXXXXXXFLATAY 442
VTNGRRHP T LA AY
Sbjct: 16573202 VTNGRRHPLTPLSASPAPASAASLAAAY 16573119
Score = 112 bits (240), Expect(2) = 8e-066
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -2 / +1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMER 496
DDQSALVYMLLQ GS WRDKV+LES YYFEGYW+EI GRL N+TERYEAMER
Sbjct: 16572916 DDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMER 16573071
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 162 bits (348), Expect(2) = 8e-066
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -2 / +1
Query: 396 ETGVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASS 217
E+GV GWRRPFVTHFTGCQPCSG RNEHY+G SCD+G+RRAL+FADDQVLRAYGFRHA
Sbjct: 5236372 ESGVSGWRRPFVTHFTGCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAGP 5236551
Query: 216 LSDDVQPLPFDYPAK 172
LSD V PLPFD+P +
Sbjct: 5236552 LSDAVSPLPFDHPTQ 5236596
Score = 134 bits (288), Expect(2) = 2e-052
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / -1
Query: 179 G*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKC 358
G SNGSG T+SLS AC PYALSTWSSAKLSARRMP SQL P *CS R PLHG HPVKC
Sbjct: 5236589 GWSNGSGLTASLSGPACRNPYALSTWSSAKLSARRMPSSQLFPV*CSFRWPLHGWHPVKC 5236410
Query: 359 VTNGRRHPCTXXXXXXXXXXXXFLATAY 442
VTNGRRHP T LA AY
Sbjct: 5236409 VTNGRRHPLTPLSASPAPASAASLAAAY 5236326
Score = 112 bits (240), Expect(2) = 8e-066
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -2 / +1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMER 496
DDQSALVYMLLQ GS WRDKV+LES YYFEGYW+EI GRL N+TERYEAMER
Sbjct: 5236123 DDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMER 5236278
Score = 95.5 bits (202), Expect(2) = 2e-052
Identities = 42/54 (77%), Positives = 42/54 (77%)
Frame = +1 / -3
Query: 490 RPPLHRLVPLRHVGEPPHDLHPVALEVVAALQEHLVPPPAALLQQHVHERGLVV 651
RP LHRLVPLR V EPP DL PV LEVV AL HLVPP AA LQQHVHER LVV
Sbjct: 5236284 RPALHRLVPLRDVAEPPRDLQPVPLEVVVAL*VHLVPPRAAALQQHVHERRLVV 5236123
Score = 88.1 bits (186), Expect(3) = 1e-037
Identities = 42/52 (80%), Positives = 42/52 (80%)
Frame = +2 / -1
Query: 497 RSIASYLSVMLASRPTISIQ*PSK**PLSRNTLSRHRLPSCSSMYTSADWSS 652
RSIASY SVML S P IS Q PSK** LSR TLSRH LP CSSMYTSADWSS
Sbjct: 5236277 RSIASYRSVMLPSLPAISSQYPSK**SLSRYTLSRHGLPLCSSMYTSADWSS 5236122
Score = 57.4 bits (119), Expect(3) = 1e-037
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = +1 / -3
Query: 334 ARLTPREVRHERAAPPVHPGLRQPGPAQGGVP 429
ARL EVRHERA PP HP LRQPG Q GVP
Sbjct: 5236434 ARLASGEVRHERAPPPAHPALRQPGARQRGVP 5236339
Score = 53.3 bits (110), Expect(3) = 1e-037
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +1 / -3
Query: 157 SASHCLCRVIERQWLHVVTERTGVPETVRPQHLVVGE 267
S S L V+ERQ H V ER GVPE VRP+HLVVGE
Sbjct: 5236611 SLSRRLRGVVERQRAHGVAERAGVPEPVRPEHLVVGE 5236501
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0685G12
Length = 149155
Score = 162 bits (348), Expect(2) = 8e-066
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -2 / +3
Query: 396 ETGVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASS 217
E+GV GWRRPFVTHFTGCQPCSG RNEHY+G SCD+G+RRAL+FADDQVLRAYGFRHA
Sbjct: 50970 ESGVSGWRRPFVTHFTGCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAGP 51149
Query: 216 LSDDVQPLPFDYPAK 172
LSD V PLPFD+P +
Sbjct: 51150 LSDAVSPLPFDHPTQ 51194
Score = 134 bits (288), Expect(2) = 2e-052
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / -1
Query: 179 G*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKC 358
G SNGSG T+SLS AC PYALSTWSSAKLSARRMP SQL P *CS R PLHG HPVKC
Sbjct: 51187 GWSNGSGLTASLSGPACRNPYALSTWSSAKLSARRMPSSQLFPV*CSFRWPLHGWHPVKC 51008
Query: 359 VTNGRRHPCTXXXXXXXXXXXXFLATAY 442
VTNGRRHP T LA AY
Sbjct: 51007 VTNGRRHPLTPLSASPAPASAASLAAAY 50924
Score = 112 bits (240), Expect(2) = 8e-066
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -2 / +3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMER 496
DDQSALVYMLLQ GS WRDKV+LES YYFEGYW+EI GRL N+TERYEAMER
Sbjct: 50721 DDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMER 50876
Score = 95.5 bits (202), Expect(2) = 2e-052
Identities = 42/54 (77%), Positives = 42/54 (77%)
Frame = +1 / -3
Query: 490 RPPLHRLVPLRHVGEPPHDLHPVALEVVAALQEHLVPPPAALLQQHVHERGLVV 651
RP LHRLVPLR V EPP DL PV LEVV AL HLVPP AA LQQHVHER LVV
Sbjct: 50882 RPALHRLVPLRDVAEPPRDLQPVPLEVVVAL*VHLVPPRAAALQQHVHERRLVV 50721
Score = 88.1 bits (186), Expect(3) = 1e-037
Identities = 42/52 (80%), Positives = 42/52 (80%)
Frame = +2 / -1
Query: 497 RSIASYLSVMLASRPTISIQ*PSK**PLSRNTLSRHRLPSCSSMYTSADWSS 652
RSIASY SVML S P IS Q PSK** LSR TLSRH LP CSSMYTSADWSS
Sbjct: 50875 RSIASYRSVMLPSLPAISSQYPSK**SLSRYTLSRHGLPLCSSMYTSADWSS 50720
Score = 57.4 bits (119), Expect(3) = 1e-037
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = +1 / -3
Query: 334 ARLTPREVRHERAAPPVHPGLRQPGPAQGGVP 429
ARL EVRHERA PP HP LRQPG Q GVP
Sbjct: 51032 ARLASGEVRHERAPPPAHPALRQPGARQRGVP 50937
Score = 53.3 bits (110), Expect(3) = 1e-037
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +1 / -3
Query: 157 SASHCLCRVIERQWLHVVTERTGVPETVRPQHLVVGE 267
S S L V+ERQ H V ER GVPE VRP+HLVVGE
Sbjct: 51209 SLSRRLRGVVERQRAHGVAERAGVPEPVRPEHLVVGE 51099
>gb|AACV01005315.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005315, whole
genome shotgun sequence
Length = 51470
Score = 162 bits (348), Expect(2) = 8e-066
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -2 / -2
Query: 396 ETGVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASS 217
E+GV GWRRPFVTHFTGCQPCSG RNEHY+G SCD+G+RRAL+FADDQVLRAYGFRHA
Sbjct: 22411 ESGVSGWRRPFVTHFTGCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAGP 22232
Query: 216 LSDDVQPLPFDYPAK 172
LSD V PLPFD+P +
Sbjct: 22231 LSDAVSPLPFDHPTQ 22187
Score = 134 bits (288), Expect(2) = 2e-052
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / +3
Query: 179 G*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKC 358
G SNGSG T+SLS AC PYALSTWSSAKLSARRMP SQL P *CS R PLHG HPVKC
Sbjct: 22194 GWSNGSGLTASLSGPACRNPYALSTWSSAKLSARRMPSSQLFPV*CSFRWPLHGWHPVKC 22373
Query: 359 VTNGRRHPCTXXXXXXXXXXXXFLATAY 442
VTNGRRHP T LA AY
Sbjct: 22374 VTNGRRHPLTPLSASPAPASAASLAAAY 22457
Score = 112 bits (240), Expect(2) = 8e-066
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -2 / -2
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMER 496
DDQSALVYMLLQ GS WRDKV+LES YYFEGYW+EI GRL N+TERYEAMER
Sbjct: 22660 DDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMER 22505
Score = 95.5 bits (202), Expect(2) = 2e-052
Identities = 42/54 (77%), Positives = 42/54 (77%)
Frame = +1 / +2
Query: 490 RPPLHRLVPLRHVGEPPHDLHPVALEVVAALQEHLVPPPAALLQQHVHERGLVV 651
RP LHRLVPLR V EPP DL PV LEVV AL HLVPP AA LQQHVHER LVV
Sbjct: 22499 RPALHRLVPLRDVAEPPRDLQPVPLEVVVAL*VHLVPPRAAALQQHVHERRLVV 22660
Score = 88.1 bits (186), Expect(3) = 1e-037
Identities = 42/52 (80%), Positives = 42/52 (80%)
Frame = +2 / +3
Query: 497 RSIASYLSVMLASRPTISIQ*PSK**PLSRNTLSRHRLPSCSSMYTSADWSS 652
RSIASY SVML S P IS Q PSK** LSR TLSRH LP CSSMYTSADWSS
Sbjct: 22506 RSIASYRSVMLPSLPAISSQYPSK**SLSRYTLSRHGLPLCSSMYTSADWSS 22661
Score = 57.4 bits (119), Expect(3) = 1e-037
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = +1 / +2
Query: 334 ARLTPREVRHERAAPPVHPGLRQPGPAQGGVP 429
ARL EVRHERA PP HP LRQPG Q GVP
Sbjct: 22349 ARLASGEVRHERAPPPAHPALRQPGARQRGVP 22444
Score = 53.3 bits (110), Expect(3) = 1e-037
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +1 / +2
Query: 157 SASHCLCRVIERQWLHVVTERTGVPETVRPQHLVVGE 267
S S L V+ERQ H V ER GVPE VRP+HLVVGE
Sbjct: 22172 SLSRRLRGVVERQRAHGVAERAGVPEPVRPEHLVVGE 22282
>dbj|AK108140.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-E08, full
insert sequence
Length = 1526
Score = 162 bits (348), Expect(2) = 8e-066
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -2 / +3
Query: 396 ETGVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASS 217
E+GV GWRRPFVTHFTGCQPCSG RNEHY+G SCD+G+RRAL+FADDQVLRAYGFRHA
Sbjct: 1131 ESGVSGWRRPFVTHFTGCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAGP 1310
Query: 216 LSDDVQPLPFDYPAK 172
LSD V PLPFD+P +
Sbjct: 1311 LSDAVSPLPFDHPTQ 1355
Score = 134 bits (288), Expect(2) = 2e-052
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / -2
Query: 179 G*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKC 358
G SNGSG T+SLS AC PYALSTWSSAKLSARRMP SQL P *CS R PLHG HPVKC
Sbjct: 1348 GWSNGSGLTASLSGPACRNPYALSTWSSAKLSARRMPSSQLFPV*CSFRWPLHGWHPVKC 1169
Query: 359 VTNGRRHPCTXXXXXXXXXXXXFLATAY 442
VTNGRRHP T LA AY
Sbjct: 1168 VTNGRRHPLTPLSASPAPASAASLAAAY 1085
Score = 112 bits (240), Expect(2) = 8e-066
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -2 / +3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMER 496
DDQSALVYMLLQ GS WRDKV+LES YYFEGYW+EI GRL N+TERYEAMER
Sbjct: 882 DDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMER 1037
Score = 95.5 bits (202), Expect(2) = 2e-052
Identities = 42/54 (77%), Positives = 42/54 (77%)
Frame = +1 / -1
Query: 490 RPPLHRLVPLRHVGEPPHDLHPVALEVVAALQEHLVPPPAALLQQHVHERGLVV 651
RP LHRLVPLR V EPP DL PV LEVV AL HLVPP AA LQQHVHER LVV
Sbjct: 1043 RPALHRLVPLRDVAEPPRDLQPVPLEVVVAL*VHLVPPRAAALQQHVHERRLVV 882
Score = 88.1 bits (186), Expect(3) = 1e-037
Identities = 42/52 (80%), Positives = 42/52 (80%)
Frame = +2 / -2
Query: 497 RSIASYLSVMLASRPTISIQ*PSK**PLSRNTLSRHRLPSCSSMYTSADWSS 652
RSIASY SVML S P IS Q PSK** LSR TLSRH LP CSSMYTSADWSS
Sbjct: 1036 RSIASYRSVMLPSLPAISSQYPSK**SLSRYTLSRHGLPLCSSMYTSADWSS 881
Score = 57.4 bits (119), Expect(3) = 1e-037
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = +1 / -1
Query: 334 ARLTPREVRHERAAPPVHPGLRQPGPAQGGVP 429
ARL EVRHERA PP HP LRQPG Q GVP
Sbjct: 1193 ARLASGEVRHERAPPPAHPALRQPGARQRGVP 1098
Score = 53.3 bits (110), Expect(3) = 1e-037
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +1 / -1
Query: 157 SASHCLCRVIERQWLHVVTERTGVPETVRPQHLVVGE 267
S S L V+ERQ H V ER GVPE VRP+HLVVGE
Sbjct: 1370 SLSRRLRGVVERQRAHGVAERAGVPEPVRPEHLVVGE 1260
>ref|XM_467540.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1526
Score = 162 bits (348), Expect(2) = 8e-066
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -2 / +3
Query: 396 ETGVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASS 217
E+GV GWRRPFVTHFTGCQPCSG RNEHY+G SCD+G+RRAL+FADDQVLRAYGFRHA
Sbjct: 1131 ESGVSGWRRPFVTHFTGCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAGP 1310
Query: 216 LSDDVQPLPFDYPAK 172
LSD V PLPFD+P +
Sbjct: 1311 LSDAVSPLPFDHPTQ 1355
Score = 134 bits (288), Expect(2) = 2e-052
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / -2
Query: 179 G*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKC 358
G SNGSG T+SLS AC PYALSTWSSAKLSARRMP SQL P *CS R PLHG HPVKC
Sbjct: 1348 GWSNGSGLTASLSGPACRNPYALSTWSSAKLSARRMPSSQLFPV*CSFRWPLHGWHPVKC 1169
Query: 359 VTNGRRHPCTXXXXXXXXXXXXFLATAY 442
VTNGRRHP T LA AY
Sbjct: 1168 VTNGRRHPLTPLSASPAPASAASLAAAY 1085
Score = 112 bits (240), Expect(2) = 8e-066
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -2 / +3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMER 496
DDQSALVYMLLQ GS WRDKV+LES YYFEGYW+EI GRL N+TERYEAMER
Sbjct: 882 DDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMER 1037
Score = 95.5 bits (202), Expect(2) = 2e-052
Identities = 42/54 (77%), Positives = 42/54 (77%)
Frame = +1 / -1
Query: 490 RPPLHRLVPLRHVGEPPHDLHPVALEVVAALQEHLVPPPAALLQQHVHERGLVV 651
RP LHRLVPLR V EPP DL PV LEVV AL HLVPP AA LQQHVHER LVV
Sbjct: 1043 RPALHRLVPLRDVAEPPRDLQPVPLEVVVAL*VHLVPPRAAALQQHVHERRLVV 882
Score = 88.1 bits (186), Expect(3) = 1e-037
Identities = 42/52 (80%), Positives = 42/52 (80%)
Frame = +2 / -2
Query: 497 RSIASYLSVMLASRPTISIQ*PSK**PLSRNTLSRHRLPSCSSMYTSADWSS 652
RSIASY SVML S P IS Q PSK** LSR TLSRH LP CSSMYTSADWSS
Sbjct: 1036 RSIASYRSVMLPSLPAISSQYPSK**SLSRYTLSRHGLPLCSSMYTSADWSS 881
Score = 57.4 bits (119), Expect(3) = 1e-037
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = +1 / -1
Query: 334 ARLTPREVRHERAAPPVHPGLRQPGPAQGGVP 429
ARL EVRHERA PP HP LRQPG Q GVP
Sbjct: 1193 ARLASGEVRHERAPPPAHPALRQPGARQRGVP 1098
Score = 53.3 bits (110), Expect(3) = 1e-037
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +1 / -1
Query: 157 SASHCLCRVIERQWLHVVTERTGVPETVRPQHLVVGE 267
S S L V+ERQ H V ER GVPE VRP+HLVVGE
Sbjct: 1370 SLSRRLRGVVERQRAHGVAERAGVPEPVRPEHLVVGE 1260
>gb|CB672405.1|CB672405 OSJNEe06G18.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06G18 3', mRNA sequence
Length = 761
Score = 162 bits (348), Expect(2) = 8e-062
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -2 / -2
Query: 396 ETGVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASS 217
E+GV GWRRPFVTHFTGCQPCSG RNEHY+G SCD+G+RRAL+FADDQVLRAYGFRHA
Sbjct: 529 ESGVSGWRRPFVTHFTGCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAGP 350
Query: 216 LSDDVQPLPFDYPAK 172
LSD V PLPFD+P +
Sbjct: 349 LSDAVSPLPFDHPTQ 305
Score = 134 bits (288), Expect(2) = 1e-049
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / +3
Query: 179 G*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKC 358
G SNGSG T+SLS AC PYALSTWSSAKLSARRMP SQL P *CS R PLHG HPVKC
Sbjct: 312 GWSNGSGLTASLSGPACRNPYALSTWSSAKLSARRMPSSQLFPV*CSFRWPLHGWHPVKC 491
Query: 359 VTNGRRHPCTXXXXXXXXXXXXFLATAY 442
VTNGRRHP T LA AY
Sbjct: 492 VTNGRRHPLTPLSASPAPASAASLAAAY 575
Score = 99.6 bits (211), Expect(2) = 8e-062
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -2 / -2
Query: 633 VYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMER 496
VYMLLQ GS WRDKV+LES YYFEGYW+EI GRL N+TERYEAMER
Sbjct: 760 VYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMER 623
Score = 86.3 bits (182), Expect(2) = 1e-049
Identities = 37/48 (77%), Positives = 37/48 (77%)
Frame = +1 / +2
Query: 490 RPPLHRLVPLRHVGEPPHDLHPVALEVVAALQEHLVPPPAALLQQHVH 633
RP LHRLVPLR V EPP DL PV LEVV AL HLVPP AA LQQHVH
Sbjct: 617 RPALHRLVPLRDVAEPPRDLQPVPLEVVVAL*VHLVPPRAAALQQHVH 760
Score = 73.0 bits (153), Expect(3) = 4e-033
Identities = 36/46 (78%), Positives = 36/46 (78%)
Frame = +2 / +3
Query: 497 RSIASYLSVMLASRPTISIQ*PSK**PLSRNTLSRHRLPSCSSMYT 634
RSIASY SVML S P IS Q PSK** LSR TLSRH LP CSSMYT
Sbjct: 624 RSIASYRSVMLPSLPAISSQYPSK**SLSRYTLSRHGLPLCSSMYT 761
Score = 57.4 bits (119), Expect(3) = 4e-033
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = +1 / +2
Query: 334 ARLTPREVRHERAAPPVHPGLRQPGPAQGGVP 429
ARL EVRHERA PP HP LRQPG Q GVP
Sbjct: 467 ARLASGEVRHERAPPPAHPALRQPGARQRGVP 562
Score = 53.3 bits (110), Expect(3) = 4e-033
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +1 / +2
Query: 157 SASHCLCRVIERQWLHVVTERTGVPETVRPQHLVVGE 267
S S L V+ERQ H V ER GVPE VRP+HLVVGE
Sbjct: 290 SLSRRLRGVVERQRAHGVAERAGVPEPVRPEHLVVGE 400
>ref|NT_107130.1| Oryza sativa (japonica cultivar-group)
Length = 325940
Score = 140 bits (300), Expect(2) = 5e-051
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = -2 / -3
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASSLS 211
G GWRRPFVTHFTGCQPC G+ N+ YS SC GM RALNFADDQVLR YG+RH LS
Sbjct: 317328 GQSGWRRPFVTHFTGCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGYRHKDPLS 317149
Query: 210 DDVQPLPFDYPA 175
D+V+PLPFDYPA
Sbjct: 317148 DEVRPLPFDYPA 317113
Score = 90.0 bits (190), Expect(2) = 1e-026
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = +2 / +2
Query: 176 AG*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVK 355
AG*SNGSG TSS S P STWSSAKLSAR +P +QL E* P HG HPVK
Sbjct: 317114 AG*SNGSGRTSSESGSLWRYP*FRSTWSSAKLSARFIPSAQLFLE*ILFGSPPHGWHPVK 317293
Query: 356 CVTNGRRHP 382
CVTNGRRHP
Sbjct: 317294 CVTNGRRHP 317320
Score = 85.4 bits (180), Expect(2) = 5e-051
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -2 / -3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMERRP 490
DDQSALVY+L + +W K +LE GY+F+GYW+E+V RL ++ RYEA ERRP
Sbjct: 317601 DDQSALVYLLSEHEEKWGAKTYLEKGYFFQGYWVEVVDRLDDIAARYEAAERRP 317440
Score = 54.2 bits (112), Expect(2) = 1e-026
Identities = 29/54 (53%), Positives = 32/54 (59%)
Frame = +2 / +2
Query: 491 GRRSIASYLSVMLASRPTISIQ*PSK**PLSRNTLSRHRLPSCSSMYTSADWSS 652
GRRS ASYL+ M +SR T S Q P K *P SR L+ H TSADWSS
Sbjct: 317441 GRRSAASYLAAMSSSRSTTSTQYPWKK*PFSR*VLAPHFSSCSERR*TSADWSS 317602
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07,
complete sequence
Length = 175703
Score = 140 bits (300), Expect(2) = 5e-051
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = -2 / -3
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASSLS 211
G GWRRPFVTHFTGCQPC G+ N+ YS SC GM RALNFADDQVLR YG+RH LS
Sbjct: 167091 GQSGWRRPFVTHFTGCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGYRHKDPLS 166912
Query: 210 DDVQPLPFDYPA 175
D+V+PLPFDYPA
Sbjct: 166911 DEVRPLPFDYPA 166876
Score = 90.0 bits (190), Expect(2) = 1e-026
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = +2 / +2
Query: 176 AG*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVK 355
AG*SNGSG TSS S P STWSSAKLSAR +P +QL E* P HG HPVK
Sbjct: 166877 AG*SNGSGRTSSESGSLWRYP*FRSTWSSAKLSARFIPSAQLFLE*ILFGSPPHGWHPVK 167056
Query: 356 CVTNGRRHP 382
CVTNGRRHP
Sbjct: 167057 CVTNGRRHP 167083
Score = 85.4 bits (180), Expect(2) = 5e-051
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -2 / -3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMERRP 490
DDQSALVY+L + +W K +LE GY+F+GYW+E+V RL ++ RYEA ERRP
Sbjct: 167364 DDQSALVYLLSEHEEKWGAKTYLEKGYFFQGYWVEVVDRLDDIAARYEAAERRP 167203
Score = 54.2 bits (112), Expect(2) = 1e-026
Identities = 29/54 (53%), Positives = 32/54 (59%)
Frame = +2 / +2
Query: 491 GRRSIASYLSVMLASRPTISIQ*PSK**PLSRNTLSRHRLPSCSSMYTSADWSS 652
GRRS ASYL+ M +SR T S Q P K *P SR L+ H TSADWSS
Sbjct: 167204 GRRSAASYLAAMSSSRSTTSTQYPWKK*PFSR*VLAPHFSSCSERR*TSADWSS 167365
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0005H02, complete sequence
Length = 144882
Score = 140 bits (300), Expect(2) = 5e-051
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = -2 / -2
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASSLS 211
G GWRRPFVTHFTGCQPC G+ N+ YS SC GM RALNFADDQVLR YG+RH LS
Sbjct: 23192 GQSGWRRPFVTHFTGCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGYRHKDPLS 23013
Query: 210 DDVQPLPFDYPA 175
D+V+PLPFDYPA
Sbjct: 23012 DEVRPLPFDYPA 22977
Score = 90.0 bits (190), Expect(2) = 3e-029
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = +2 / +1
Query: 176 AG*SNGSGCTSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVK 355
AG*SNGSG TSS S P STWSSAKLSAR +P +QL E* P HG HPVK
Sbjct: 22978 AG*SNGSGRTSSESGSLWRYP*FRSTWSSAKLSARFIPSAQLFLE*ILFGSPPHGWHPVK 23157
Query: 356 CVTNGRRHP 382
CVTNGRRHP
Sbjct: 23158 CVTNGRRHP 23184
Score = 85.4 bits (180), Expect(2) = 5e-051
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -2 / -2
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMERRP 490
DDQSALVY+L + +W K +LE GY+F+GYW+E+V RL ++ RYEA ERRP
Sbjct: 23465 DDQSALVYLLSEHEEKWGAKTYLEKGYFFQGYWVEVVDRLDDIAARYEAAERRP 23304
Score = 62.9 bits (131), Expect(2) = 3e-029
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +1 / +3
Query: 493 PPLHRLVPLRHVGEPPHDLHPVALEVVAALQEHLVPPPAALLQQHVHERGLVV 651
PPL RLVP R V EP DLHPV LE VA L+ L PP +L + V ER LVV
Sbjct: 23307 PPLRRLVPRRDVVEPVDDLHPVPLEEVALLEVGLGPPFLLVLGEEVDERRLVV 23465
>gb|AU163941.1|AU163941 AU163941 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11545, mRNA sequence
Length = 560
Score = 116 bits (247), Expect(2) = 9e-044
Identities = 44/62 (70%), Positives = 48/62 (77%)
Frame = -2 / +1
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASSLS 211
G GWRRPFVTHFTGCQPC G+ N+ YS SC GM RALNFADDQVLR YG+RH LS
Sbjct: 373 GQSGWRRPFVTHFTGCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGYRHKDPLS 552
Query: 210 DD 205
D+
Sbjct: 553 DE 558
Score = 85.4 bits (180), Expect(2) = 9e-044
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -2 / +1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMERRP 490
DDQSALVY+L + +W K +LE GY+F+GYW+E+V RL ++ RYEA ERRP
Sbjct: 100 DDQSALVYLLSEHEEKWGAKTYLEKGYFFQGYWVEVVDRLDDIAARYEAAERRP 261
Score = 75.3 bits (158), Expect(2) = 6e-025
Identities = 37/60 (61%), Positives = 39/60 (65%)
Frame = +2 / -1
Query: 203 TSSLSELACLKPYALSTWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKCVTNGRRHP 382
TSS S P STWSSAKLSAR +P +QL E* P HG HPVKCVTNGRRHP
Sbjct: 560 TSSXSGSLWRYP*FRSTWSSAKLSARFIPSAQLFLE*ILFGSPPHGWHPVKCVTNGRRHP 381
Score = 62.9 bits (131), Expect(2) = 6e-025
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +1 / -3
Query: 493 PPLHRLVPLRHVGEPPHDLHPVALEVVAALQEHLVPPPAALLQQHVHERGLVV 651
PPL RLVP R V EP DLHPV LE VA L+ L PP +L + V ER LVV
Sbjct: 258 PPLRRLVPRRDVVEPVDDLHPVPLEEVALLEVGLGPPFLLVLGEEVDERRLVV 100
>gb|CO435684.1|CO435684 OsMR750 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 536
Score = 98.7 bits (209), Expect(2) = 3e-032
Identities = 40/68 (58%), Positives = 42/68 (61%)
Frame = -2 / +2
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASSLS 211
G GWRRPFVTHFTGC PC G+ N YS SC GM RALNF VLR Y +R LS
Sbjct: 326 GQSGWRRPFVTHFTGCXPCGGEPNNIYSXXSCADGMNRALNFXXXXVLRNYXYRXKDPLS 505
Query: 210 DDVQPLPF 187
V LPF
Sbjct: 506 XXVXXLPF 529
Score = 70.7 bits (148), Expect(3) = 7e-022
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +2 / -3
Query: 248 STWSSAKLSARRMPWSQLSPE*CSLRCPLHG*HPVKCVTNGRRHP 382
STW S KLSAR +P +QL E* P HG HPVKCVTNGRRHP
Sbjct: 468 STWXSXKLSARFIPSAQLXLE*MLFGSPPHGWHPVKCVTNGRRHP 334
Score = 64.3 bits (134), Expect(2) = 3e-032
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = -2 / +1
Query: 627 MLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMERR 493
+L + +W K +LE GY+F+GYW+E+V RL ++ RYEA ERR
Sbjct: 70 LLSEHEEKWGTKTYLEKGYFFQGYWVEVVDRLDDIAARYEAAERR 204
Score = 49.6 bits (102), Expect(3) = 7e-022
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = +1 / -3
Query: 493 PPLHRLVPLRHVGEPPHDLHPVALEVVAALQEHLVPP 603
PPL RLVP R V EP DLHPV LE VA L+ L P
Sbjct: 204 PPLRRLVPRRDVVEPVDDLHPVTLEEVALLEVGLGSP 94
Score = 27.2 bits (53), Expect(3) = 7e-022
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1 / -2
Query: 187 ERQWLHVVTERTGVPETVRPQHLVVGE 267
ERQ H V ER V P+H V GE
Sbjct: 529 ERQRXHXVGERVLXAVXVVPEHXVXGE 449
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 140 bits (300), Expect = 2e-031
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = -2 / -2
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASSLS 211
G GWRRPFVTHFTGCQPC G+ N+ YS SC GM RALNFADDQVLR YG+RH LS
Sbjct: 19448540 GQSGWRRPFVTHFTGCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGYRHKDPLS 19448361
Query: 210 DDVQPLPFDYPA 175
D+V+PLPFDYPA
Sbjct: 19448360 DEVRPLPFDYPA 19448325
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 140 bits (300), Expect = 2e-031
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = -2 / -1
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRHASSLS 211
G GWRRPFVTHFTGCQPC G+ N+ YS SC GM RALNFADDQVLR YG+RH LS
Sbjct: 19608089 GQSGWRRPFVTHFTGCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGYRHKDPLS 19607910
Query: 210 DDVQPLPFDYPA 175
D+V+PLPFDYPA
Sbjct: 19607909 DEVRPLPFDYPA 19607874
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101 genomic
scaffold, whole genome shotgun sequence
Length = 5106408
Score = 85.4 bits (180), Expect(2) = 2e-029
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -2 / -1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMERRP 490
DDQSALVY+L + +W K +LE GY+F+GYW+E+V RL ++ RYEA ERRP
Sbjct: 2197854 DDQSALVYLLSEHEEKWGAKTYLEKGYFFQGYWVEVVDRLDDIAARYEAAERRP 2197693
Score = 68.0 bits (142), Expect(2) = 2e-029
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -2 / -1
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQG 286
G GWRRPFVTHFTGCQPC G+ N+ YS SC G
Sbjct: 2197581 GQSGWRRPFVTHFTGCQPCGGEPNKIYSKKSCADG 2197477
>gb|AACV01023345.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023345, whole
genome shotgun sequence
Length = 5458
Score = 85.4 bits (180), Expect(2) = 2e-029
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -2 / +3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERYEAMERRP 490
DDQSALVY+L + +W K +LE GY+F+GYW+E+V RL ++ RYEA ERRP
Sbjct: 5079 DDQSALVYLLSEHEEKWGAKTYLEKGYFFQGYWVEVVDRLDDIAARYEAAERRP 5240
Score = 68.0 bits (142), Expect(2) = 2e-029
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -2 / +3
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQG 286
G GWRRPFVTHFTGCQPC G+ N+ YS SC G
Sbjct: 5352 GQSGWRRPFVTHFTGCQPCGGEPNKIYSKKSCADG 5456
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 59.3 bits (123), Expect(3) = 7e-023
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = -2 / -3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+++LL + RW +KV++E Y+ G+W +V + M ER+
Sbjct: 2280343 DDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEEMMERH 2280203
Score = 51.0 bits (105), Expect(3) = 7e-023
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -2 / -3
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRHASSLSDDVQ 199
Y + C GM RA NFAD+QVLR YGFRH S S V+
Sbjct: 2280124 YPRERCLGGMERAFNFADNQVLRLYGFRHRSLASARVR 2280011
Score = 38.2 bits (77), Expect(3) = 7e-023
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 390 GVHGWRRPFVTHFTGCQPCSG 328
G+ R PFVTHF GC+PC G
Sbjct: 2280196 GLGDERWPFVTHFVGCKPCGG 2280134
>ref|NT_107151.1| Oryza sativa (japonica cultivar-group)
Length = 901339
Score = 59.3 bits (123), Expect(3) = 8e-023
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = -2 / -1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+++LL + RW +KV++E Y+ G+W +V + M ER+
Sbjct: 463777 DDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEEMMERH 463637
Score = 51.0 bits (105), Expect(3) = 8e-023
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -2 / -1
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRHASSLSDDVQ 199
Y + C GM RA NFAD+QVLR YGFRH S S V+
Sbjct: 463558 YPRERCLGGMERAFNFADNQVLRLYGFRHRSLASARVR 463445
Score = 38.2 bits (77), Expect(3) = 8e-023
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 390 GVHGWRRPFVTHFTGCQPCSG 328
G+ R PFVTHF GC+PC G
Sbjct: 463630 GLGDERWPFVTHFVGCKPCGG 463568
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 122901
Score = 59.3 bits (123), Expect(3) = 8e-023
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = -2 / +1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+++LL + RW +KV++E Y+ G+W +V + M ER+
Sbjct: 110608 DDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEEMMERH 110748
Score = 51.0 bits (105), Expect(3) = 8e-023
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -2 / +1
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRHASSLSDDVQ 199
Y + C GM RA NFAD+QVLR YGFRH S S V+
Sbjct: 110827 YPRERCLGGMERAFNFADNQVLRLYGFRHRSLASARVR 110940
Score = 38.2 bits (77), Expect(3) = 8e-023
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 390 GVHGWRRPFVTHFTGCQPCSG 328
G+ R PFVTHF GC+PC G
Sbjct: 110755 GLGDERWPFVTHFVGCKPCGG 110817
>gb|AACV01023972.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023972, whole
genome shotgun sequence
Length = 17692
Score = 59.3 bits (123), Expect(3) = 9e-023
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = -2 / -2
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+++LL + RW +KV++E Y+ G+W +V + M ER+
Sbjct: 10284 DDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEEMMERH 10144
Score = 51.0 bits (105), Expect(3) = 9e-023
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -2 / -2
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRHASSLSDDVQ 199
Y + C GM RA NFAD+QVLR YGFRH S S V+
Sbjct: 10065 YPRERCLGGMERAFNFADNQVLRLYGFRHRSLASARVR 9952
Score = 38.2 bits (77), Expect(3) = 9e-023
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 390 GVHGWRRPFVTHFTGCQPCSG 328
G+ R PFVTHF GC+PC G
Sbjct: 10137 GLGDERWPFVTHFVGCKPCGG 10075
>dbj|AK110842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-B07, full
insert sequence
Length = 1540
Score = 59.3 bits (123), Expect(3) = 9e-023
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = -2 / +3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+++LL + RW +KV++E Y+ G+W +V + M ER+
Sbjct: 1032 DDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEEMMERH 1172
Score = 51.0 bits (105), Expect(3) = 9e-023
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -2 / +3
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRHASSLSDDVQ 199
Y + C GM RA NFAD+QVLR YGFRH S S V+
Sbjct: 1251 YPRERCLGGMERAFNFADNQVLRLYGFRHRSLASARVR 1364
Score = 38.2 bits (77), Expect(3) = 9e-023
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / +3
Query: 390 GVHGWRRPFVTHFTGCQPCSG 328
G+ R PFVTHF GC+PC G
Sbjct: 1179 GLGDERWPFVTHFVGCKPCGG 1241
>gb|AC152840.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0082D04, *** SEQUENCING IN PROGRESS ***, 17
unordered pieces
Length = 152360
Score = 107 bits (229), Expect = 1e-021
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = -2 / +1
Query: 390 GVHGWRRPFVTHFTGCQPCSGQRNEHYSGDSCDQGMRRALNFADDQVLRAYGFRH 226
G GWRRPFVTHF+GCQPC G+ N+ YS SC GM RALNFADDQVLR YG+RH
Sbjct: 19303 GQSGWRRPFVTHFSGCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGYRH 19467
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 63.4 bits (132), Expect(3) = 3e-021
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = -2 / -3
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+Y+LL + +W +KVF+E+ YY G+W +V + M E +
Sbjct: 655909 DDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEMMENH 655769
Score = 44.1 bits (90), Expect(3) = 3e-021
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / -3
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRH 226
Y + C + M RA NFAD+QVLR YGF H
Sbjct: 655690 YPVERCLRSMERAFNFADNQVLRLYGFAH 655604
Score = 35.4 bits (71), Expect(3) = 3e-021
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 390 GVHGWRRPFVTHFTGCQPC 334
G+ R PFVTHF GC+PC
Sbjct: 655762 GLGDERWPFVTHFVGCKPC 655706
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0476H10
Length = 151703
Score = 63.4 bits (132), Expect(3) = 3e-021
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = -2 / -2
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+Y+LL + +W +KVF+E+ YY G+W +V + M E +
Sbjct: 89194 DDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEMMENH 89054
Score = 44.1 bits (90), Expect(3) = 3e-021
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / -2
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRH 226
Y + C + M RA NFAD+QVLR YGF H
Sbjct: 88975 YPVERCLRSMERAFNFADNQVLRLYGFAH 88889
Score = 35.4 bits (71), Expect(3) = 3e-021
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 390 GVHGWRRPFVTHFTGCQPC 334
G+ R PFVTHF GC+PC
Sbjct: 89047 GLGDERWPFVTHFVGCKPC 88991
>gb|AACV01004560.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004560, whole
genome shotgun sequence
Length = 71882
Score = 63.4 bits (132), Expect(3) = 3e-021
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = -2 / -1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+Y+LL + +W +KVF+E+ YY G+W +V + M E +
Sbjct: 14294 DDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEMMENH 14154
Score = 44.1 bits (90), Expect(3) = 3e-021
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / -1
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRH 226
Y + C + M RA NFAD+QVLR YGF H
Sbjct: 14075 YPVERCLRSMERAFNFADNQVLRLYGFAH 13989
Score = 35.4 bits (71), Expect(3) = 3e-021
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 390 GVHGWRRPFVTHFTGCQPC 334
G+ R PFVTHF GC+PC
Sbjct: 14147 GLGDERWPFVTHFVGCKPC 14091
>dbj|AK100984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145D01, full
insert sequence
Length = 1910
Score = 63.4 bits (132), Expect(3) = 4e-021
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = -2 / +1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+Y+LL + +W +KVF+E+ YY G+W +V + M E +
Sbjct: 1312 DDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEMMENH 1452
Score = 44.1 bits (90), Expect(3) = 4e-021
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / +1
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRH 226
Y + C + M RA NFAD+QVLR YGF H
Sbjct: 1531 YPVERCLRSMERAFNFADNQVLRLYGFAH 1617
Score = 35.4 bits (71), Expect(3) = 4e-021
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / +1
Query: 390 GVHGWRRPFVTHFTGCQPC 334
G+ R PFVTHF GC+PC
Sbjct: 1459 GLGDERWPFVTHFVGCKPC 1515
>ref|XM_466075.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1910
Score = 63.4 bits (132), Expect(3) = 4e-021
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = -2 / +1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+Y+LL + +W +KVF+E+ YY G+W +V + M E +
Sbjct: 1312 DDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEMMENH 1452
Score = 44.1 bits (90), Expect(3) = 4e-021
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / +1
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRH 226
Y + C + M RA NFAD+QVLR YGF H
Sbjct: 1531 YPVERCLRSMERAFNFADNQVLRLYGFAH 1617
Score = 35.4 bits (71), Expect(3) = 4e-021
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / +1
Query: 390 GVHGWRRPFVTHFTGCQPC 334
G+ R PFVTHF GC+PC
Sbjct: 1459 GLGDERWPFVTHFVGCKPC 1515
>gb|CB669167.1|CB669167 OSJNEe01H08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01H08 3', mRNA sequence
Length = 825
Score = 63.4 bits (132), Expect(3) = 4e-021
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = -2 / -1
Query: 651 DDQSALVYMLLQEGSRWRDKVFLESGYYFEGYWMEIVGRLANMTERY 511
DDQSAL+Y+LL + +W +KVF+E+ YY G+W +V + M E +
Sbjct: 702 DDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEMMENH 562
Score = 44.1 bits (90), Expect(3) = 4e-021
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / -1
Query: 312 YSGDSCDQGMRRALNFADDQVLRAYGFRH 226
Y + C + M RA NFAD+QVLR YGF H
Sbjct: 483 YPVERCLRSMERAFNFADNQVLRLYGFAH 397
Score = 35.4 bits (71), Expect(3) = 4e-021
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 390 GVHGWRRPFVTHFTGCQPC 334
G+ R PFVTHF GC+PC
Sbjct: 555 GLGDERWPFVTHFVGCKPC 499
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,105,004,255
Number of Sequences: 438736
Number of extensions: 58920273
Number of successful extensions: 378198
Number of sequences better than 1.0e-020: 40
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 166996170104
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)