TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478343.2.1
(694 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 ... 134 1e-029
gb|AACV01008189.1| Oryza sativa (japonica cultivar-group) c... 134 1e-029
ref|NM_185146.1| Oryza sativa (japonica cultivar-group), mRNA 134 1e-029
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 134 1e-029
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 134 1e-029
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 134 1e-029
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 134 1e-029
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 134 1e-029
ref|NT_107124.1| Oryza sativa (japonica cultivar-group) 105 5e-025
gb|AC146523.2| Oryza sativa (japonica cultivar-group) chrom... 105 5e-025
gb|AACV01005389.1| Oryza sativa (japonica cultivar-group) c... 105 6e-025
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 97 1e-021
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 97 1e-021
dbj|AP004382.2| Oryza sativa (japonica cultivar-group) geno... 97 1e-021
gb|AACV01015538.1| Oryza sativa (japonica cultivar-group) c... 97 1e-021
dbj|AK107239.1| Oryza sativa (japonica cultivar-group) cDNA... 97 1e-021
ref|XM_477222.1| Oryza sativa (japonica cultivar-group), mRNA 97 1e-021
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 87 2e-021
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 87 3e-021
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 87 3e-021
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 87 3e-021
dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA... 87 3e-021
dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA... 87 3e-021
ref|NM_192244.1| Oryza sativa (japonica cultivar-group), p... 87 3e-021
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 105 4e-021
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 105 4e-021
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 105 4e-021
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 105 4e-021
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence,
complete sequence
Length = 143205
Score = 134 bits (287), Expect = 1e-029
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = -2 / -1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQ 514
EVL H AVGGF+TH GWNST E+++EGVPM+C P GDQ GNARYV HVWK G EV G +
Sbjct: 798 EVLRHRAVGGFWTHNGWNSTTESLAEGVPMLCRPSFGDQMGNARYVEHVWKAGFEVVGGE 619
Query: 513 LERGEIKAAIDRLMGGSEEGEGIRKRMNELKIAAD 409
LERG ++ AI RLM S+ GE + K AA+
Sbjct: 618 LERGAVEEAIRRLMAESDGGEMRARARELKKAAAE 514
>gb|AACV01008189.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008189, whole
genome shotgun sequence
Length = 44992
Score = 134 bits (287), Expect = 1e-029
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = -2 / -1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQ 514
EVL H AVGGF+TH GWNST E+++EGVPM+C P GDQ GNARYV HVWK G EV G +
Sbjct: 25132 EVLRHRAVGGFWTHNGWNSTTESLAEGVPMLCRPSFGDQMGNARYVEHVWKAGFEVVGGE 24953
Query: 513 LERGEIKAAIDRLMGGSEEGEGIRKRMNELKIAAD 409
LERG ++ AI RLM S+ GE + K AA+
Sbjct: 24952 LERGAVEEAIRRLMAESDGGEMRARARELKKAAAE 24848
>ref|NM_185146.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1413
Score = 134 bits (287), Expect = 1e-029
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = -2 / +1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQ 514
EVL H AVGGF+TH GWNST E+++EGVPM+C P GDQ GNARYV HVWK G EV G +
Sbjct: 1060 EVLRHRAVGGFWTHNGWNSTTESLAEGVPMLCRPSFGDQMGNARYVEHVWKAGFEVVGGE 1239
Query: 513 LERGEIKAAIDRLMGGSEEGEGIRKRMNELKIAAD 409
LERG ++ AI RLM S+ GE + K AA+
Sbjct: 1240 LERGAVEEAIRRLMAESDGGEMRARARELKKAAAE 1344
>ref|NT_107188.1| Oryza sativa (japonica cultivar-group)
Length = 1363716
Score = 134 bits (287), Expect = 1e-029
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQ 514
EVL H AVGGF+TH GWNST E+++EGVPM+C P GDQ GNARYV HVWK G EV G +
Sbjct: 991397 EVLRHRAVGGFWTHNGWNSTTESLAEGVPMLCRPSFGDQMGNARYVEHVWKAGFEVVGGE 991576
Query: 513 LERGEIKAAIDRLMGGSEEGEGIRKRMNELKIAAD 409
LERG ++ AI RLM S+ GE + K AA+
Sbjct: 991577 LERGAVEEAIRRLMAESDGGEMRARARELKKAAAE 991681
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 134 bits (287), Expect = 1e-029
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = -2 / +3
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQ 514
EVL H AVGGF+TH GWNST E+++EGVPM+C P GDQ GNARYV HVWK G EV G +
Sbjct: 8036247 EVLRHRAVGGFWTHNGWNSTTESLAEGVPMLCRPSFGDQMGNARYVEHVWKAGFEVVGGE 8036426
Query: 513 LERGEIKAAIDRLMGGSEEGEGIRKRMNELKIAAD 409
LERG ++ AI RLM S+ GE + K AA+
Sbjct: 8036427 LERGAVEEAIRRLMAESDGGEMRARARELKKAAAE 8036531
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 134 bits (287), Expect = 1e-029
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = -2 / +3
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQ 514
EVL H AVGGF+TH GWNST E+++EGVPM+C P GDQ GNARYV HVWK G EV G +
Sbjct: 35302410 EVLRHRAVGGFWTHNGWNSTTESLAEGVPMLCRPSFGDQMGNARYVEHVWKAGFEVVGGE 35302589
Query: 513 LERGEIKAAIDRLMGGSEEGEGIRKRMNELKIAAD 409
LERG ++ AI RLM S+ GE + K AA+
Sbjct: 35302590 LERGAVEEAIRRLMAESDGGEMRARARELKKAAAE 35302694
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 134 bits (287), Expect = 1e-029
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQ 514
EVL H AVGGF+TH GWNST E+++EGVPM+C P GDQ GNARYV HVWK G EV G +
Sbjct: 34424672 EVLRHRAVGGFWTHNGWNSTTESLAEGVPMLCRPSFGDQMGNARYVEHVWKAGFEVVGGE 34424851
Query: 513 LERGEIKAAIDRLMGGSEEGEGIRKRMNELKIAAD 409
LERG ++ AI RLM S+ GE + K AA+
Sbjct: 34424852 LERGAVEEAIRRLMAESDGGEMRARARELKKAAAE 34424956
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 134 bits (287), Expect = 1e-029
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = -2 / +1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQ 514
EVL H AVGGF+TH GWNST E+++EGVPM+C P GDQ GNARYV HVWK G EV G +
Sbjct: 34334200 EVLRHRAVGGFWTHNGWNSTTESLAEGVPMLCRPSFGDQMGNARYVEHVWKAGFEVVGGE 34334379
Query: 513 LERGEIKAAIDRLMGGSEEGEGIRKRMNELKIAAD 409
LERG ++ AI RLM S+ GE + K AA+
Sbjct: 34334380 LERGAVEEAIRRLMAESDGGEMRARARELKKAAAE 34334484
>ref|NT_107124.1| Oryza sativa (japonica cultivar-group)
Length = 867134
Score = 105 bits (225), Expect(2) = 5e-025
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -2 / -2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVL+HPA+G F THCGWNST+E++S VPMIC P GDQ G ARYVC +WKVG V
Sbjct: 169852 EVLSHPAIGAFLTHCGWNSTLESISRTVPMICKPCGGDQLGTARYVCDMWKVGVRV 169685
Score = 32.2 bits (64), Expect(2) = 5e-025
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 519 DQLERGEIKAAIDRLMGGSEEG 454
D+L RG I+AAI+RLM G E G
Sbjct: 169675 DKLTRGGIQAAIERLMDGIEGG 169610
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0045D11 map near 50283S, complete sequence
Length = 148306
Score = 105 bits (225), Expect(2) = 5e-025
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -2 / -2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVL+HPA+G F THCGWNST+E++S VPMIC P GDQ G ARYVC +WKVG V
Sbjct: 65130 EVLSHPAIGAFLTHCGWNSTLESISRTVPMICKPCGGDQLGTARYVCDMWKVGVRV 64963
Score = 32.2 bits (64), Expect(2) = 5e-025
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 519 DQLERGEIKAAIDRLMGGSEEG 454
D+L RG I+AAI+RLM G E G
Sbjct: 64953 DKLTRGGIQAAIERLMDGIEGG 64888
>gb|AACV01005389.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005389, whole
genome shotgun sequence
Length = 7380
Score = 105 bits (225), Expect(2) = 6e-025
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVL+HPA+G F THCGWNST+E++S VPMIC P GDQ G ARYVC +WKVG V
Sbjct: 5390 EVLSHPAIGAFLTHCGWNSTLESISRTVPMICKPCGGDQLGTARYVCDMWKVGVRV 5557
Score = 32.2 bits (64), Expect(2) = 6e-025
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 519 DQLERGEIKAAIDRLMGGSEEG 454
D+L RG I+AAI+RLM G E G
Sbjct: 5567 DKLTRGGIQAAIERLMDGIEGG 5632
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 97.3 bits (206), Expect(2) = 1e-021
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAH AVGGF+TH GWNST+E+VSEGVPMIC P+ DQ N RY+ VW VG E+ G
Sbjct: 7890164 EVLAHHAVGGFWTHNGWNSTLESVSEGVPMICKPQFADQMLNTRYLEAVWAVGFELVG 7890337
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / +2
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERGEIK AI RLM E E
Sbjct: 7890338 KLERGEIKKAIKRLMVEKEGAE 7890403
>gb|CH401221.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000058 genomic
scaffold, whole genome shotgun sequence
Length = 3500188
Score = 97.3 bits (206), Expect(2) = 1e-021
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / +1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAH AVGGF+TH GWNST+E+VSEGVPMIC P+ DQ N RY+ VW VG E+ G
Sbjct: 1749571 EVLAHHAVGGFWTHNGWNSTLESVSEGVPMICKPQFADQMLNTRYLEAVWAVGFELVG 1749744
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / +1
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERGEIK AI RLM E E
Sbjct: 1749745 KLERGEIKKAIKRLMVEKEGAE 1749810
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0418E08
Length = 141040
Score = 97.3 bits (206), Expect(2) = 1e-021
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / +3
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAH AVGGF+TH GWNST+E+VSEGVPMIC P+ DQ N RY+ VW VG E+ G
Sbjct: 50451 EVLAHHAVGGFWTHNGWNSTLESVSEGVPMICKPQFADQMLNTRYLEAVWAVGFELVG 50624
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / +3
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERGEIK AI RLM E E
Sbjct: 50625 KLERGEIKKAIKRLMVEKEGAE 50690
>gb|AACV01015538.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015538, whole
genome shotgun sequence
Length = 47958
Score = 97.3 bits (206), Expect(2) = 1e-021
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / +3
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAH AVGGF+TH GWNST+E+VSEGVPMIC P+ DQ N RY+ VW VG E+ G
Sbjct: 2736 EVLAHHAVGGFWTHNGWNSTLESVSEGVPMICKPQFADQMLNTRYLEAVWAVGFELVG 2909
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / +3
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERGEIK AI RLM E E
Sbjct: 2910 KLERGEIKKAIKRLMVEKEGAE 2975
>dbj|AK107239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-F03, full
insert sequence
Length = 1618
Score = 97.3 bits (206), Expect(2) = 1e-021
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAH AVGGF+TH GWNST+E+VSEGVPMIC P+ DQ N RY+ VW VG E+ G
Sbjct: 1139 EVLAHHAVGGFWTHNGWNSTLESVSEGVPMICKPQFADQMLNTRYLEAVWAVGFELVG 1312
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / +2
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERGEIK AI RLM E E
Sbjct: 1313 KLERGEIKKAIKRLMVEKEGAE 1378
>ref|XM_477222.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1618
Score = 97.3 bits (206), Expect(2) = 1e-021
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAH AVGGF+TH GWNST+E+VSEGVPMIC P+ DQ N RY+ VW VG E+ G
Sbjct: 1139 EVLAHHAVGGFWTHNGWNSTLESVSEGVPMICKPQFADQMLNTRYLEAVWAVGFELVG 1312
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / +2
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERGEIK AI RLM E E
Sbjct: 1313 KLERGEIKKAIKRLMVEKEGAE 1378
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 86.8 bits (183), Expect(2) = 2e-021
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 690 VLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
+L HPAVGGF THCGWNST+EAV+ GVPM+ PR+ DQ+ N + + V +VG V
Sbjct: 120929 ILNHPAVGGFVTHCGWNSTLEAVTAGVPMVTWPRYADQFYNEKLITEVLEVGVGV 121093
Score = 39.1 bits (79), Expect(2) = 2e-021
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2 / +2
Query: 498 IKAAIDRLMGGSEEGEGIRKRMNELKIAADKGIDESAGS 382
+ AI R+MG EEGE IRK+ EL + A +++ S
Sbjct: 121154 VAGAIGRVMGDGEEGEAIRKKATELGVKARGALEKGGSS 121270
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0696E01
Length = 194056
Score = 86.8 bits (183), Expect(2) = 3e-021
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 690 VLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
+L HPAVGGF THCGWNST+EAV+ GVPM+ PR+ DQ+ N + + V +VG V
Sbjct: 120929 ILNHPAVGGFVTHCGWNSTLEAVTAGVPMVTWPRYADQFYNEKLITEVLEVGVGV 121093
Score = 39.1 bits (79), Expect(2) = 3e-021
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2 / +2
Query: 498 IKAAIDRLMGGSEEGEGIRKRMNELKIAADKGIDESAGS 382
+ AI R+MG EEGE IRK+ EL + A +++ S
Sbjct: 121154 VAGAIGRVMGDGEEGEAIRKKATELGVKARGALEKGGSS 121270
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0004A09
Length = 158826
Score = 86.8 bits (183), Expect(2) = 3e-021
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -2 / +1
Query: 690 VLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
+L HPAVGGF THCGWNST+EAV+ GVPM+ PR+ DQ+ N + + V +VG V
Sbjct: 40132 ILNHPAVGGFVTHCGWNSTLEAVTAGVPMVTWPRYADQFYNEKLITEVLEVGVGV 40296
Score = 39.1 bits (79), Expect(2) = 3e-021
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2 / +1
Query: 498 IKAAIDRLMGGSEEGEGIRKRMNELKIAADKGIDESAGS 382
+ AI R+MG EEGE IRK+ EL + A +++ S
Sbjct: 40357 VAGAIGRVMGDGEEGEAIRKKATELGVKARGALEKGGSS 40473
>gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001928, whole
genome shotgun sequence
Length = 16252
Score = 86.8 bits (183), Expect(2) = 3e-021
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -2 / -3
Query: 690 VLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
+L HPAVGGF THCGWNST+EAV+ GVPM+ PR+ DQ+ N + + V +VG V
Sbjct: 5765 ILNHPAVGGFVTHCGWNSTLEAVTAGVPMVTWPRYADQFYNEKLITEVLEVGVGV 5601
Score = 39.1 bits (79), Expect(2) = 3e-021
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2 / -3
Query: 498 IKAAIDRLMGGSEEGEGIRKRMNELKIAADKGIDESAGS 382
+ AI R+MG EEGE IRK+ EL + A +++ S
Sbjct: 5540 VAGAIGRVMGDGEEGEAIRKKATELGVKARGALEKGGSS 5424
>dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I21, full
insert sequence
Length = 1896
Score = 86.8 bits (183), Expect(2) = 3e-021
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 690 VLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
+L HPAVGGF THCGWNST+EAV+ GVPM+ PR+ DQ+ N + + V +VG V
Sbjct: 1169 ILNHPAVGGFVTHCGWNSTLEAVTAGVPMVTWPRYADQFYNEKLITEVLEVGVGV 1333
Score = 39.1 bits (79), Expect(2) = 3e-021
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2 / +2
Query: 498 IKAAIDRLMGGSEEGEGIRKRMNELKIAADKGIDESAGS 382
+ AI R+MG EEGE IRK+ EL + A +++ S
Sbjct: 1394 VAGAIGRVMGDGEEGEAIRKKATELGVKARGALEKGGSS 1510
>dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147K24, full
insert sequence
Length = 1896
Score = 86.8 bits (183), Expect(2) = 3e-021
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 690 VLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
+L HPAVGGF THCGWNST+EAV+ GVPM+ PR+ DQ+ N + + V +VG V
Sbjct: 1169 ILNHPAVGGFVTHCGWNSTLEAVTAGVPMVTWPRYADQFYNEKLITEVLEVGVGV 1333
Score = 39.1 bits (79), Expect(2) = 3e-021
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2 / +2
Query: 498 IKAAIDRLMGGSEEGEGIRKRMNELKIAADKGIDESAGS 382
+ AI R+MG EEGE IRK+ EL + A +++ S
Sbjct: 1394 VAGAIGRVMGDGEEGEAIRKKATELGVKARGALEKGGSS 1510
>ref|NM_192244.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1476
Score = 86.8 bits (183), Expect(2) = 3e-021
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -2 / +1
Query: 690 VLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
+L HPAVGGF THCGWNST+EAV+ GVPM+ PR+ DQ+ N + + V +VG V
Sbjct: 1072 ILNHPAVGGFVTHCGWNSTLEAVTAGVPMVTWPRYADQFYNEKLITEVLEVGVGV 1236
Score = 39.1 bits (79), Expect(2) = 3e-021
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2 / +1
Query: 498 IKAAIDRLMGGSEEGEGIRKRMNELKIAADKGIDESAGS 382
+ AI R+MG EEGE IRK+ EL + A +++ S
Sbjct: 1297 VAGAIGRVMGDGEEGEAIRKKATELGVKARGALEKGGSS 1413
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 105 bits (225), Expect = 4e-021
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVL+HPA+G F THCGWNST+E++S VPMIC P GDQ G ARYVC +WKVG V
Sbjct: 17573708 EVLSHPAIGAFLTHCGWNSTLESISRTVPMICKPCGGDQLGTARYVCDMWKVGVRV 17573875
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 105 bits (225), Expect = 4e-021
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -2 / +1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVL+HPA+G F THCGWNST+E++S VPMIC P GDQ G ARYVC +WKVG V
Sbjct: 31026772 EVLSHPAIGAFLTHCGWNSTLESISRTVPMICKPCGGDQLGTARYVCDMWKVGVRV 31026939
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 105 bits (225), Expect = 4e-021
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -2 / -2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVL+HPA+G F THCGWNST+E++S VPMIC P GDQ G ARYVC +WKVG V
Sbjct: 13932293 EVLSHPAIGAFLTHCGWNSTLESISRTVPMICKPCGGDQLGTARYVCDMWKVGVRV 13932126
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 105 bits (225), Expect = 4e-021
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -2 / -1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVL+HPA+G F THCGWNST+E++S VPMIC P GDQ G ARYVC +WKVG V
Sbjct: 14014295 EVLSHPAIGAFLTHCGWNSTLESISRTVPMICKPCGGDQLGTARYVCDMWKVGVRV 14014128
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,632,347,937
Number of Sequences: 438736
Number of extensions: 49008458
Number of successful extensions: 689060
Number of sequences better than 1.0e-020: 38
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 155197527651
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)