TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440503.2.1
(542 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 253 9e-069
dbj|AP004774.3| Oryza sativa (japonica cultivar-group) geno... 253 9e-069
dbj|AP004119.3| Oryza sativa (japonica cultivar-group) geno... 253 9e-069
gb|AACV01005431.1| Oryza sativa (japonica cultivar-group) c... 253 9e-069
ref|XM_467832.1| Oryza sativa (japonica cultivar-group), mRNA 253 1e-068
gb|CB643271.1|CB643271 OSJNEb03N21.r OSJNEb Oryza sativa (j... 253 1e-068
dbj|AK119887.1| Oryza sativa (japonica cultivar-group) cDNA... 252 6e-068
gb|CB643268.1|CB643268 OSJNEb03N19.r OSJNEb Oryza sativa (j... 253 8e-066
gb|CB671636.1|CB671636 OSJNEe05E21.r OSJNEe Oryza sativa (j... 253 8e-066
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 253 8e-066
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 253 8e-066
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 253 8e-066
gb|CH401263.1| Oryza sativa (japonica cultivar-group) chrom... 184 3e-062
ref|NT_107118.1| Oryza sativa (japonica cultivar-group) 184 3e-062
gb|AC135596.4| Oryza sativa (japonica cultivar-group) chrom... 184 3e-062
gb|AC135601.3| Oryza sativa (japonica cultivar-group) chrom... 184 3e-062
gb|AACV01022862.1| Oryza sativa (japonica cultivar-group) c... 184 3e-062
gb|CB669908.1|CB669908 OSJNEe02L13.r OSJNEe Oryza sativa (j... 184 3e-062
gb|CB642595.1|CB642595 OSJNEb02N16.f OSJNEb Oryza sativa (j... 184 3e-062
ref|NT_107119.1| Oryza sativa (japonica cultivar-group) 100 5e-061
gb|AC135599.3| Oryza sativa (japonica cultivar-group) chrom... 100 5e-061
gb|AACV01022886.1| Oryza sativa (japonica cultivar-group) c... 100 5e-061
dbj|AK109882.1| Oryza sativa (japonica cultivar-group) cDNA... 100 5e-061
gb|AACV01022860.1| Oryza sativa (japonica cultivar-group) c... 99 1e-059
gb|AACV01022882.1| Oryza sativa (japonica cultivar-group) c... 91 3e-052
dbj|AK070171.1| Oryza sativa (japonica cultivar-group) cDNA... 91 9e-052
gb|CB645318.1|CB645318 OSJNEb06O17.f OSJNEb Oryza sativa (j... 184 3e-050
gb|CB655149.1|CB655149 OSJNEc08E11.r OSJNEc Oryza sativa (j... 184 4e-050
gb|AU075385.1|AU075385 AU075385 Rice panicle at flowering s... 185 4e-045
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 184 5e-045
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 184 5e-045
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 184 5e-045
gb|CB649907.1|CB649907 OSJNEb14B16.r OSJNEb Oryza sativa (j... 183 1e-044
gb|CB649953.1|CB649953 OSJNEb14C16.r OSJNEb Oryza sativa (j... 183 1e-044
gb|CB654985.1|CB654985 OSJNEc07P05.f OSJNEc Oryza sativa (j... 121 3e-043
gb|CB669907.1|CB669907 OSJNEe02L13.f OSJNEe Oryza sativa (j... 120 4e-043
gb|CB673206.1|CB673206 OSJNEe07K02.f OSJNEe Oryza sativa (j... 158 5e-037
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 73 1e-032
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 73 1e-032
emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromoso... 73 2e-032
emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromoso... 73 2e-032
gb|AACV01010168.1| Oryza sativa (japonica cultivar-group) c... 73 2e-032
dbj|AK120331.1| Oryza sativa (japonica cultivar-group) cDNA... 73 2e-032
ref|XM_473275.1| Oryza sativa (japonica cultivar-group), p... 73 8e-032
gb|C98929.1|C98929 C98929 Rice panicle at flowering stage O... 122 9e-029
gb|AC134922.2| Oryza sativa (japonica cultivar-group) chrom... 73 3e-026
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 253 bits (548), Expect = 8e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -3
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 6793968 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 6793789
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 6793788 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 6793609
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 6793608 KKVIDHGSHFMMVGDDEFEMSFTP*S 6793531
Score = 226 bits (487), Expect(2) = 9e-069
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +2
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 6793532 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 6793711
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 6793712 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 6793891
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 6793892 VAIAFRPSMLLKDGSFV 6793942
Score = 141 bits (303), Expect(2) = 4e-053
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 6793831 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 6793652
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 6793651 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 6793532
Score = 90.9 bits (192), Expect(2) = 4e-053
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKAVEATAGGM 182
RADP+TGYPGRTYRFYRG TV+ FGYGLSYSKYSH F +++ + ++A A
Sbjct: 6794064 RADPSTGYPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAA 6793885
Query: 183 A 185
A
Sbjct: 6793884 A 6793882
Score = 58.3 bits (121), Expect(2) = 9e-069
Identities = 29/40 (72%), Positives = 29/40 (72%)
Frame = -2 / +2
Query: 121 FVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
F K EY E*LRP*P L TV PR*N YVRPG PV GSAR
Sbjct: 6793946 FATKW*EYFE*LRP*PNL*TVLPR*NLYVRPGYPVDGSAR 6794065
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0431B06
Length = 154796
Score = 253 bits (548), Expect(2) = 2e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -3
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 119529 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 119350
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 119349 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 119170
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 119169 KKVIDHGSHFMMVGDDEFEMSFTP*S 119092
Score = 226 bits (487), Expect(2) = 9e-069
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +2
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 119093 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 119272
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 119273 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 119452
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 119453 VAIAFRPSMLLKDGSFV 119503
Score = 141 bits (303), Expect(2) = 4e-053
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 119392 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 119213
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 119212 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 119093
Score = 90.9 bits (192), Expect(2) = 4e-053
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKAVEATAGGM 182
RADP+TGYPGRTYRFYRG TV+ FGYGLSYSKYSH F +++ + ++A A
Sbjct: 119625 RADPSTGYPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAA 119446
Query: 183 A 185
A
Sbjct: 119445 A 119443
Score = 58.3 bits (121), Expect(2) = 9e-069
Identities = 29/40 (72%), Positives = 29/40 (72%)
Frame = -2 / +2
Query: 121 FVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
F K EY E*LRP*P L TV PR*N YVRPG PV GSAR
Sbjct: 119507 FATKW*EYFE*LRP*PNL*TVLPR*NLYVRPGYPVDGSAR 119626
Score = 22.6 bits (43), Expect(2) = 2e-066
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1 / -1
Query: 1 CAPTRPRATPAGRTG 45
C P PR P RTG
Sbjct: 119627 CVPIHPRDIPDERTG 119583
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1288_G09
Length = 109672
Score = 253 bits (548), Expect(2) = 2e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -3
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 8756 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 8577
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 8576 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 8397
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 8396 KKVIDHGSHFMMVGDDEFEMSFTP*S 8319
Score = 226 bits (487), Expect(2) = 9e-069
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +1
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 8320 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 8499
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 8500 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 8679
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 8680 VAIAFRPSMLLKDGSFV 8730
Score = 141 bits (303), Expect(2) = 4e-053
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 8619 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 8440
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 8439 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 8320
Score = 90.9 bits (192), Expect(2) = 4e-053
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKAVEATAGGM 182
RADP+TGYPGRTYRFYRG TV+ FGYGLSYSKYSH F +++ + ++A A
Sbjct: 8852 RADPSTGYPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAA 8673
Query: 183 A 185
A
Sbjct: 8672 A 8670
Score = 58.3 bits (121), Expect(2) = 9e-069
Identities = 29/40 (72%), Positives = 29/40 (72%)
Frame = -2 / +1
Query: 121 FVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
F K EY E*LRP*P L TV PR*N YVRPG PV GSAR
Sbjct: 8734 FATKW*EYFE*LRP*PNL*TVLPR*NLYVRPGYPVDGSAR 8853
Score = 22.6 bits (43), Expect(2) = 2e-066
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1 / -1
Query: 1 CAPTRPRATPAGRTG 45
C P PR P RTG
Sbjct: 8854 CVPIHPRDIPDERTG 8810
>gb|AACV01005431.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005431, whole
genome shotgun sequence
Length = 31287
Score = 253 bits (548), Expect(2) = 2e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -3
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 9346 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 9167
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 9166 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 8987
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 8986 KKVIDHGSHFMMVGDDEFEMSFTP*S 8909
Score = 226 bits (487), Expect(2) = 9e-069
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +3
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 8910 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 9089
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 9090 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 9269
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 9270 VAIAFRPSMLLKDGSFV 9320
Score = 141 bits (303), Expect(2) = 4e-053
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 9209 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 9030
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 9029 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 8910
Score = 90.9 bits (192), Expect(2) = 4e-053
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKAVEATAGGM 182
RADP+TGYPGRTYRFYRG TV+ FGYGLSYSKYSH F +++ + ++A A
Sbjct: 9442 RADPSTGYPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAA 9263
Query: 183 A 185
A
Sbjct: 9262 A 9260
Score = 58.3 bits (121), Expect(2) = 9e-069
Identities = 29/40 (72%), Positives = 29/40 (72%)
Frame = -2 / +3
Query: 121 FVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
F K EY E*LRP*P L TV PR*N YVRPG PV GSAR
Sbjct: 9324 FATKW*EYFE*LRP*PNL*TVLPR*NLYVRPGYPVDGSAR 9443
Score = 22.6 bits (43), Expect(2) = 2e-066
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1 / -1
Query: 1 CAPTRPRATPAGRTG 45
C P PR P RTG
Sbjct: 9444 CVPIHPRDIPDERTG 9400
>ref|XM_467832.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2628
Score = 253 bits (548), Expect(2) = 2e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / +3
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 1953 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 2132
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 2133 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 2312
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 2313 KKVIDHGSHFMMVGDDEFEMSFTP*S 2390
Score = 226 bits (487), Expect(2) = 1e-068
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / -3
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 2389 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 2210
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 2209 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 2030
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 2029 VAIAFRPSMLLKDGSFV 1979
Score = 141 bits (303), Expect(2) = 4e-053
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / +2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 2090 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 2269
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 2270 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 2389
Score = 90.9 bits (192), Expect(2) = 4e-053
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +3 / +3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKAVEATAGGM 182
RADP+TGYPGRTYRFYRG TV+ FGYGLSYSKYSH F +++ + ++A A
Sbjct: 1857 RADPSTGYPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAA 2036
Query: 183 A 185
A
Sbjct: 2037 A 2039
Score = 58.3 bits (121), Expect(2) = 1e-068
Identities = 29/40 (72%), Positives = 29/40 (72%)
Frame = -2 / -3
Query: 121 FVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
F K EY E*LRP*P L TV PR*N YVRPG PV GSAR
Sbjct: 1975 FATKW*EYFE*LRP*PNL*TVLPR*NLYVRPGYPVDGSAR 1856
Score = 22.6 bits (43), Expect(2) = 2e-066
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1 / +1
Query: 1 CAPTRPRATPAGRTG 45
C P PR P RTG
Sbjct: 1855 CVPIHPRDIPDERTG 1899
>gb|CB643271.1|CB643271 OSJNEb03N21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03N21 3', mRNA sequence
Length = 858
Score = 253 bits (548), Expect(2) = 2e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -1
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 720 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 541
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 540 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 361
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 360 KKVIDHGSHFMMVGDDEFEMSFTP*S 283
Score = 226 bits (487), Expect(2) = 1e-068
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +2
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 284 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 463
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 464 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 643
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 644 VAIAFRPSMLLKDGSFV 694
Score = 140 bits (301), Expect(2) = 7e-053
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -3
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 583 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 404
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 403 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHPLI 284
Score = 90.9 bits (192), Expect(2) = 7e-053
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +3 / -1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKAVEATAGGM 182
RADP+TGYPGRTYRFYRG TV+ FGYGLSYSKYSH F +++ + ++A A
Sbjct: 816 RADPSTGYPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAA 637
Query: 183 A 185
A
Sbjct: 636 A 634
Score = 58.3 bits (121), Expect(2) = 1e-068
Identities = 29/40 (72%), Positives = 29/40 (72%)
Frame = -2 / +2
Query: 121 FVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
F K EY E*LRP*P L TV PR*N YVRPG PV GSAR
Sbjct: 698 FATKW*EYFE*LRP*PNL*TVLPR*NLYVRPGYPVDGSAR 817
Score = 22.6 bits (43), Expect(2) = 2e-066
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1 / -2
Query: 1 CAPTRPRATPAGRTG 45
C P PR P RTG
Sbjct: 818 CVPIHPRDIPDERTG 774
>dbj|AK119887.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-H05, full
insert sequence
Length = 2628
Score = 252 bits (545), Expect(2) = 5e-066
Identities = 102/146 (69%), Positives = 117/146 (80%)
Frame = +3 / +3
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 1953 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 2132
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT H+EFEVSPCKHFSRATEDG
Sbjct: 2133 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHMEFEVSPCKHFSRATEDG 2312
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 2313 KKVIDHGSHFMMVGDDEFEMSFTP*S 2390
Score = 223 bits (481), Expect(2) = 6e-068
Identities = 94/137 (68%), Positives = 104/137 (75%)
Frame = -2 / -3
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNS VC+ LRCRLW PIS
Sbjct: 2389 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSIWTVCIDLRCRLWKPIS 2210
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 2209 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 2030
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 2029 VAIAFRPSMLLKDGSFV 1979
Score = 142 bits (304), Expect(2) = 3e-053
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / +2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 2090 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPYGVR 2269
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 2270 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 2389
Score = 90.9 bits (192), Expect(2) = 3e-053
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +3 / +3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKAVEATAGGM 182
RADP+TGYPGRTYRFYRG TV+ FGYGLSYSKYSH F +++ + ++A A
Sbjct: 1857 RADPSTGYPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAA 2036
Query: 183 A 185
A
Sbjct: 2037 A 2039
Score = 58.3 bits (121), Expect(2) = 6e-068
Identities = 29/40 (72%), Positives = 29/40 (72%)
Frame = -2 / -3
Query: 121 FVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
F K EY E*LRP*P L TV PR*N YVRPG PV GSAR
Sbjct: 1975 FATKW*EYFE*LRP*PNL*TVLPR*NLYVRPGYPVDGSAR 1856
Score = 22.6 bits (43), Expect(2) = 5e-066
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1 / +1
Query: 1 CAPTRPRATPAGRTG 45
C P PR P RTG
Sbjct: 1855 CVPIHPRDIPDERTG 1899
>gb|CB643268.1|CB643268 OSJNEb03N19.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03N19 3', mRNA sequence
Length = 741
Score = 253 bits (548), Expect = 8e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -3
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 664 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 485
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 484 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 305
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 304 KKVIDHGSHFMMVGDDEFEMSFTP*S 227
Score = 226 bits (487), Expect(2) = 2e-065
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +3
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 228 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 407
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 408 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 587
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 588 VAIAFRPSMLLKDGSFV 638
Score = 141 bits (303), Expect(2) = 2e-048
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 527 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 348
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 347 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 228
Score = 75.3 bits (158), Expect(2) = 2e-048
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +3 / -3
Query: 24 YPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKAVEATAGGMA 185
YPGRTYRFYRG TV+ FGYGLSYSKYSH F +++ + ++A A A
Sbjct: 739 YPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAAA 578
Score = 47.3 bits (97), Expect(2) = 2e-065
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = -2 / +3
Query: 121 FVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG 26
F K EY E*LRP*P L TV PR*N YVRPG
Sbjct: 642 FATKW*EYFE*LRP*PNL*TVLPR*NLYVRPG 737
>gb|CB671636.1|CB671636 OSJNEe05E21.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05E21 3', mRNA sequence
Length = 726
Score = 253 bits (548), Expect = 8e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -2
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 647 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 468
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 467 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 288
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 287 KKVIDHGSHFMMVGDDEFEMSFTP*S 210
Score = 226 bits (487), Expect(2) = 7e-065
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +1
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 211 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 390
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 391 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 570
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 571 VAIAFRPSMLLKDGSFV 621
Score = 141 bits (303), Expect(2) = 2e-048
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -1
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 510 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 331
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 330 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 211
Score = 74.8 bits (157), Expect(2) = 2e-048
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / -2
Query: 21 GYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKAVEATAGGMA 185
GYPGRTYRFY G TV+ FGYGLSYSKYSH F +++ + ++A A A
Sbjct: 725 GYPGRTYRFYGGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAAA 561
Score = 45.5 bits (93), Expect(2) = 7e-065
Identities = 23/34 (67%), Positives = 23/34 (67%)
Frame = -2 / +1
Query: 121 FVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*P 20
F K EY E*LRP*P L TV P *N YVRPG P
Sbjct: 625 FATKW*EYFE*LRP*PNL*TVLPP*NLYVRPGYP 726
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 253 bits (548), Expect = 8e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -2
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 18190476 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 18190297
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 18190296 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 18190117
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 18190116 KKVIDHGSHFMMVGDDEFEMSFTP*S 18190039
Score = 226 bits (487), Expect = 2e-057
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +2
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 18190040 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 18190219
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 18190220 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 18190399
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 18190400 VAIAFRPSMLLKDGSFV 18190450
Score = 141 bits (303), Expect = 6e-032
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -1
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 18190339 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 18190160
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 18190159 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 18190040
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 253 bits (548), Expect = 8e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -2
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 31643540 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 31643361
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 31643360 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 31643181
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 31643180 KKVIDHGSHFMMVGDDEFEMSFTP*S 31643103
Score = 226 bits (487), Expect = 2e-057
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +1
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 31643104 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 31643283
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 31643284 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 31643463
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 31643464 VAIAFRPSMLLKDGSFV 31643514
Score = 141 bits (303), Expect = 6e-032
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -1
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 31643403 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 31643224
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 31643223 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 31643104
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 253 bits (548), Expect = 8e-066
Identities = 103/146 (70%), Positives = 117/146 (80%)
Frame = +3 / -3
Query: 90 YSKYSHRFATKPPPTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGP 269
YS + TK P S++ GLKA+ A G SYDVE IG ETCD+LKFPA+VRVQNHGP
Sbjct: 31628969 YSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGP 31628790
Query: 270 MDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDG 449
MDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSRATEDG
Sbjct: 31628789 MDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDG 31628610
Query: 450 RKVIDQGSHFVMVGEDEFEMSFMA*S 527
+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 31628609 KKVIDHGSHFMMVGDDEFEMSFTP*S 31628532
Score = 226 bits (487), Expect = 2e-057
Identities = 95/137 (69%), Positives = 105/137 (76%)
Frame = -2 / +1
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 31628533 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 31628712
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
WLAG P + GQR +ST C PSMGPWFCT T+AGNLS SHVS PI+STS*L +P A
Sbjct: 31628713 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFCTLTSAGNLSLSHVSGPISSTS*LTVPAAA 31628892
Query: 166 ASTALRPATLLVGGGFV 116
+ A RP+ LL G FV
Sbjct: 31628893 VAIAFRPSMLLKDGSFV 31628943
Score = 141 bits (303), Expect = 6e-032
Identities = 64/100 (64%), Positives = 74/100 (74%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GAEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVR
Sbjct: 31628832 AQVPGARQGAEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVR 31628653
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
GEP+QALQ DGG QEGD S +A DG R *VRDELH +I
Sbjct: 31628652 GEPMQALQQSDGGRQEGD*SWVAFHDGWR**VRDELHALI 31628533
>gb|CH401263.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000100 genomic
scaffold, whole genome shotgun sequence
Length = 6309838
Score = 184 bits (397), Expect(2) = 3e-062
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -3
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 1643960 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 1643781
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 1643780 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 1643601
Query: 489 GEDEFE 506
GE++ E
Sbjct: 1643600 GEEDDE 1643583
Score = 161 bits (347), Expect(2) = 1e-046
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +1
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 1643584 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 1643763
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 1643764 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 1643913
Score = 107 bits (229), Expect = 1e-021
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 1643862 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 1643683
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 1643682 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 1643593
Score = 100 bits (213), Expect(3) = 5e-061
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = +3 / +1
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP +QLIGF+S HL+ + A++ F++SPC+HFSR +DG+KVID+GSH++MV +DE E+
Sbjct: 2026609 GRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVIDRGSHYLMVDKDELEI 2026788
Query: 510 SFMA* 524
F A*
Sbjct: 2026789 RFEA* 2026803
Score = 98.7 bits (209), Expect(3) = 1e-059
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = +3 / -2
Query: 318 TDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGED 497
T GRPA QLIGF+S H++ + A V FEVSPC+HFS EDG +VID G+HF+MVG++
Sbjct: 1605726 TTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVIDGGAHFLMVGDE 1605547
Query: 498 EFEMSF 515
E E SF
Sbjct: 1605546 ELETSF 1605529
Score = 95.5 bits (202), Expect(3) = 5e-061
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +3 / +1
Query: 135 SNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+N+ T+ G SY +E IG++ C++LKFPAVV VQNHGPMDGKHSVL+++RWPN
Sbjct: 2026420 TNLLASLRTTTTSEGDESYHIEEIGTDGCEQLKFPAVVEVQNHGPMDGKHSVLMYLRWPN 2026599
Query: 315 ATDG 326
A G
Sbjct: 2026600 AKGG 2026611
Score = 92.3 bits (195), Expect(3) = 1e-059
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +3 / -2
Query: 174 GGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDG 326
GGM+SY V+ IG E C RL FPAVV VQNHGPMDGKHSVL+++RWP + G
Sbjct: 1605864 GGMSSYLVKEIGVERCSRLVFPAVVEVQNHGPMDGKHSVLMYLRWPTTSGG 1605712
Score = 91.3 bits (193), Expect(3) = 2e-052
Identities = 35/62 (56%), Positives = 46/62 (74%)
Frame = +3 / +3
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP QLIGF++ HL+ + ++ E+SPC+H SRA DG KVID+GSHF+MV EDE E+
Sbjct: 1984977 GRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVIDRGSHFLMVEEDELEI 1985156
Query: 510 SF 515
F
Sbjct: 1985157 RF 1985162
Score = 81.7 bits (172), Expect(3) = 1e-059
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3 / -2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHR 110
RADPATGYPGR+YRFY+G TV+NFGYGLSYSK+S R
Sbjct: 1606056 RADPATGYPGRSYRFYQGNTVYNFGYGLSYSKFSRR 1605949
Score = 81.7 bits (172), Expect(3) = 2e-035
Identities = 32/51 (62%), Positives = 36/51 (70%)
Frame = -2 / +2
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPP 173
P + +G R STEC PSMGPWFCT TTAG SR H+S PI+ T *L MPP
Sbjct: 1605713 PPLVVGHRRYMSTECLPSMGPWFCTSTTAGKTSRLHLSTPISLTR*LLMPP 1605865
Score = 81.3 bits (171), Expect(3) = 5e-061
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKA 158
RADPATGYPGR+YRFY+G TV+ FGYGLSYS YS + + P + L A
Sbjct: 2026279 RADPATGYPGRSYRFYQGKTVYKFGYGLSYSSYSRQLVSGGKPAESYTNLLA 2026434
Score = 81.3 bits (171), Expect(3) = 2e-052
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +3 / +3
Query: 168 TAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDG 326
T G A Y V+ IG + C+RL+FP +V VQNHGPMDGKH+VL+F+RW + G
Sbjct: 1984821 TPEGDAVYRVDEIGDDRCERLRFPVMVEVQNHGPMDGKHTVLMFVRWSSTDGG 1984979
Score = 79.4 bits (167), Expect(3) = 3e-038
Identities = 33/55 (60%), Positives = 35/55 (63%)
Frame = -2 / -1
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAVAS 161
P L R N ST C PSMGPWFCT T GNLSRSH S PI+ST * A P V +
Sbjct: 1984978 PPSVLDHRTNISTVCLPSMGPWFCTSTMTGNLSRSHRSSPISSTR*TASPSGVVA 1984814
Score = 78.0 bits (164), Expect(2) = 3e-062
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPP 131
RADPATGYPGR+YRFY+G V+ FGYGLSYSK+S R P
Sbjct: 1644095 RADPATGYPGRSYRFYQGNPVYKFGYGLSYSKFSRRLVAAAKP 1643967
Score = 75.8 bits (159), Expect(3) = 6e-038
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -2 / -3
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
P +A G R STEC PSMGPWFCT TTAGNLS S S PI+S *L+ P V
Sbjct: 2026610 PPLAFGHRRYMSTECLPSMGPWFCTSTTAGNLSCSQPSVPISSMW*LSSPSDV 2026452
Score = 75.3 bits (158), Expect(3) = 2e-052
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +3 / +3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFAT 119
R DPATGYPGR+YRFY+G TV+ FGYGLSYSK++ R +
Sbjct: 1984644 RPDPATGYPGRSYRFYKGKTVYKFGYGLSYSKFACRIVS 1984760
Score = 74.8 bits (157), Expect(3) = 6e-038
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = -2 / -3
Query: 541 FQHNRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRL 362
F ++ A LISNSS T+ +P SITFLPS + LKC GL SN A LRC L
Sbjct: 2026820 FPPSKTQASNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWL 2026641
Query: 361 WNPISWLAGRP 329
PISW+ GRP
Sbjct: 2026640 LKPISWVVGRP 2026608
Score = 73.5 bits (154), Expect(3) = 3e-038
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = -2 / -1
Query: 532 NRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNP 353
++ + LISNSSS T+ KC+P SITF PS++A L+C GL S LRC NP
Sbjct: 1985179 SKTQSWNLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNP 1985000
Query: 352 ISWLAGRP 329
IS L GRP
Sbjct: 1984999 ISCLTGRP 1984976
Score = 56.5 bits (117), Expect(3) = 2e-035
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = -1 / +1
Query: 542 LPTQPGSRHEAHLELILADHHEVRALIDHLPAILRRPAEVLAGAHLELHVRRLRRPQVQA 363
+P+ + +A L+L++ +H ++ IDH A+L PAE+LA AHLE H L + A
Sbjct: 1605502 IPSTQPPKAKAGLQLLIPNHEKMSPSIDHPLAVLPHPAEMLARAHLEAHHGLLPYLDMLA 1605681
Query: 362 LEPDQL 345
EPDQL
Sbjct: 1605682 PEPDQL 1605699
Score = 52.8 bits (109), Expect(3) = 2e-035
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = -2 / +2
Query: 109 RWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
R E LE*LRP*PKL TV P * R +RPG*PVAGSAR
Sbjct: 1605950 RRENLE*LRP*PKL*TVLPW*KR*LRPG*PVAGSAR 1606057
Score = 48.7 bits (100), Expect(3) = 6e-038
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -2 / -3
Query: 103 EYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
E LE*LRP*P L TV P * R +RPG*PVAGSAR
Sbjct: 2026379 E*LE*LRP*PNL*TVLPW*KR*LRPG*PVAGSAR 2026278
Score = 48.7 bits (100), Expect(2) = 1e-046
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / +1
Query: 130 GGGFVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
G +R E LE*LRP*P L T P * R +RPG*PVAGSAR
Sbjct: 1643968 GFAAATRRRENLE*LRP*PNL*TGLPW*KR*LRPG*PVAGSAR 1644096
Score = 47.3 bits (97), Expect(3) = 3e-038
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -2 / -1
Query: 97 LE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
LE*LRP P L TV P *NR +RPG*PVAGS R
Sbjct: 1984738 LE*LRPYPNL*TVLPL*NR*LRPG*PVAGSGR 1984643
>ref|NT_107118.1| Oryza sativa (japonica cultivar-group)
Length = 339677
Score = 184 bits (397), Expect(2) = 3e-062
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -1
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 133403 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 133224
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 133223 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 133044
Query: 489 GEDEFE 506
GE++ E
Sbjct: 133043 GEEDDE 133026
Score = 161 bits (347), Expect(2) = 1e-046
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +1
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 133027 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 133206
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 133207 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 133356
Score = 107 bits (229), Expect(2) = 1e-022
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -3
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 133305 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 133126
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 133125 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 133036
Score = 98.7 bits (209), Expect(3) = 1e-059
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = +3 / -2
Query: 318 TDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGED 497
T GRPA QLIGF+S H++ + A V FEVSPC+HFS EDG +VID G+HF+MVG++
Sbjct: 98671 TTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVIDGGAHFLMVGDE 98492
Query: 498 EFEMSF 515
E E SF
Sbjct: 98491 ELETSF 98474
Score = 92.3 bits (195), Expect(3) = 1e-059
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +3 / -2
Query: 174 GGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDG 326
GGM+SY V+ IG E C RL FPAVV VQNHGPMDGKHSVL+++RWP + G
Sbjct: 98809 GGMSSYLVKEIGVERCSRLVFPAVVEVQNHGPMDGKHSVLMYLRWPTTSGG 98657
Score = 81.7 bits (172), Expect(3) = 1e-059
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3 / -2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHR 110
RADPATGYPGR+YRFY+G TV+NFGYGLSYSK+S R
Sbjct: 99001 RADPATGYPGRSYRFYQGNTVYNFGYGLSYSKFSRR 98894
Score = 81.7 bits (172), Expect(3) = 2e-035
Identities = 32/51 (62%), Positives = 36/51 (70%)
Frame = -2 / +3
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPP 173
P + +G R STEC PSMGPWFCT TTAG SR H+S PI+ T *L MPP
Sbjct: 98658 PPLVVGHRRYMSTECLPSMGPWFCTSTTAGKTSRLHLSTPISLTR*LLMPP 98810
Score = 78.0 bits (164), Expect(2) = 3e-062
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3 / -1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPP 131
RADPATGYPGR+YRFY+G V+ FGYGLSYSK+S R P
Sbjct: 133538 RADPATGYPGRSYRFYQGNPVYKFGYGLSYSKFSRRLVAAAKP 133410
Score = 56.5 bits (117), Expect(3) = 2e-035
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = -1 / +2
Query: 542 LPTQPGSRHEAHLELILADHHEVRALIDHLPAILRRPAEVLAGAHLELHVRRLRRPQVQA 363
+P+ + +A L+L++ +H ++ IDH A+L PAE+LA AHLE H L + A
Sbjct: 98447 IPSTQPPKAKAGLQLLIPNHEKMSPSIDHPLAVLPHPAEMLARAHLEAHHGLLPYLDMLA 98626
Query: 362 LEPDQL 345
EPDQL
Sbjct: 98627 PEPDQL 98644
Score = 52.8 bits (109), Expect(3) = 2e-035
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = -2 / +3
Query: 109 RWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
R E LE*LRP*PKL TV P * R +RPG*PVAGSAR
Sbjct: 98895 RRENLE*LRP*PKL*TVLPW*KR*LRPG*PVAGSAR 99002
Score = 48.7 bits (100), Expect(2) = 1e-046
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / +1
Query: 130 GGGFVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
G +R E LE*LRP*P L T P * R +RPG*PVAGSAR
Sbjct: 133411 GFAAATRRRENLE*LRP*PNL*TGLPW*KR*LRPG*PVAGSAR 133539
Score = 32.7 bits (65), Expect(2) = 1e-022
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -2
Query: 1 CAPTRPRATPAGRT 42
CAPTRP ATPAG T
Sbjct: 133540 CAPTRPPATPAGAT 133499
>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032D10
map E20933S, complete sequence
Length = 146118
Score = 184 bits (397), Expect(2) = 3e-062
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -2
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 133403 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 133224
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 133223 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 133044
Query: 489 GEDEFE 506
GE++ E
Sbjct: 133043 GEEDDE 133026
Score = 161 bits (347), Expect(2) = 1e-046
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +1
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 133027 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 133206
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 133207 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 133356
Score = 107 bits (229), Expect(2) = 6e-023
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -1
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 133305 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 133126
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 133125 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 133036
Score = 98.7 bits (209), Expect(3) = 1e-059
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = +3 / -3
Query: 318 TDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGED 497
T GRPA QLIGF+S H++ + A V FEVSPC+HFS EDG +VID G+HF+MVG++
Sbjct: 98671 TTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVIDGGAHFLMVGDE 98492
Query: 498 EFEMSF 515
E E SF
Sbjct: 98491 ELETSF 98474
Score = 92.3 bits (195), Expect(3) = 1e-059
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +3 / -3
Query: 174 GGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDG 326
GGM+SY V+ IG E C RL FPAVV VQNHGPMDGKHSVL+++RWP + G
Sbjct: 98809 GGMSSYLVKEIGVERCSRLVFPAVVEVQNHGPMDGKHSVLMYLRWPTTSGG 98657
Score = 81.7 bits (172), Expect(3) = 2e-035
Identities = 32/51 (62%), Positives = 36/51 (70%)
Frame = -2 / +3
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPP 173
P + +G R STEC PSMGPWFCT TTAG SR H+S PI+ T *L MPP
Sbjct: 98658 PPLVVGHRRYMSTECLPSMGPWFCTSTTAGKTSRLHLSTPISLTR*LLMPP 98810
Score = 81.7 bits (172), Expect(3) = 1e-059
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHR 110
RADPATGYPGR+YRFY+G TV+NFGYGLSYSK+S R
Sbjct: 99001 RADPATGYPGRSYRFYQGNTVYNFGYGLSYSKFSRR 98894
Score = 78.0 bits (164), Expect(2) = 3e-062
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3 / -2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPP 131
RADPATGYPGR+YRFY+G V+ FGYGLSYSK+S R P
Sbjct: 133538 RADPATGYPGRSYRFYQGNPVYKFGYGLSYSKFSRRLVAAAKP 133410
Score = 56.5 bits (117), Expect(3) = 2e-035
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = -1 / +2
Query: 542 LPTQPGSRHEAHLELILADHHEVRALIDHLPAILRRPAEVLAGAHLELHVRRLRRPQVQA 363
+P+ + +A L+L++ +H ++ IDH A+L PAE+LA AHLE H L + A
Sbjct: 98447 IPSTQPPKAKAGLQLLIPNHEKMSPSIDHPLAVLPHPAEMLARAHLEAHHGLLPYLDMLA 98626
Query: 362 LEPDQL 345
EPDQL
Sbjct: 98627 PEPDQL 98644
Score = 52.8 bits (109), Expect(3) = 2e-035
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = -2 / +3
Query: 109 RWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
R E LE*LRP*PKL TV P * R +RPG*PVAGSAR
Sbjct: 98895 RRENLE*LRP*PKL*TVLPW*KR*LRPG*PVAGSAR 99002
Score = 48.7 bits (100), Expect(2) = 1e-046
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / +1
Query: 130 GGGFVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
G +R E LE*LRP*P L T P * R +RPG*PVAGSAR
Sbjct: 133411 GFAAATRRRENLE*LRP*PNL*TGLPW*KR*LRPG*PVAGSAR 133539
Score = 32.7 bits (65), Expect(2) = 6e-023
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -3
Query: 1 CAPTRPRATPAGRT 42
CAPTRP ATPAG T
Sbjct: 133540 CAPTRPPATPAGAT 133499
>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0051D22, complete sequence
Length = 119919
Score = 184 bits (397), Expect(2) = 3e-062
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / +1
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 91369 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 91548
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 91549 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 91728
Query: 489 GEDEFE 506
GE++ E
Sbjct: 91729 GEEDDE 91746
Score = 161 bits (347), Expect(2) = 1e-046
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / -2
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 91745 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 91566
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 91565 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 91416
Score = 107 bits (229), Expect(2) = 5e-023
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / +3
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 91467 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 91646
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 91647 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 91736
Score = 78.0 bits (164), Expect(2) = 3e-062
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPP 131
RADPATGYPGR+YRFY+G V+ FGYGLSYSK+S R P
Sbjct: 91234 RADPATGYPGRSYRFYQGNPVYKFGYGLSYSKFSRRLVAAAKP 91362
Score = 48.7 bits (100), Expect(2) = 1e-046
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / -2
Query: 130 GGGFVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
G +R E LE*LRP*P L T P * R +RPG*PVAGSAR
Sbjct: 91361 GFAAATRRRENLE*LRP*PNL*TGLPW*KR*LRPG*PVAGSAR 91233
Score = 32.7 bits (65), Expect(2) = 5e-023
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 1 CAPTRPRATPAGRT 42
CAPTRP ATPAG T
Sbjct: 91232 CAPTRPPATPAGAT 91273
>gb|AACV01022862.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022862, whole
genome shotgun sequence
Length = 5995
Score = 184 bits (397), Expect(2) = 3e-062
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -3
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 2162 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 1983
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 1982 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 1803
Query: 489 GEDEFE 506
GE++ E
Sbjct: 1802 GEEDDE 1785
Score = 161 bits (347), Expect(2) = 1e-046
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +1
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 1786 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 1965
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 1966 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 2115
Score = 107 bits (229), Expect(2) = 2e-024
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 2064 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 1885
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 1884 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 1795
Score = 78.0 bits (164), Expect(2) = 3e-062
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPP 131
RADPATGYPGR+YRFY+G V+ FGYGLSYSK+S R P
Sbjct: 2297 RADPATGYPGRSYRFYQGNPVYKFGYGLSYSKFSRRLVAAAKP 2169
Score = 48.7 bits (100), Expect(2) = 1e-046
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / +1
Query: 130 GGGFVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
G +R E LE*LRP*P L T P * R +RPG*PVAGSAR
Sbjct: 2170 GFAAATRRRENLE*LRP*PNL*TGLPW*KR*LRPG*PVAGSAR 2298
Score = 32.7 bits (65), Expect(2) = 2e-024
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -1
Query: 1 CAPTRPRATPAGRT 42
CAPTRP ATPAG T
Sbjct: 2299 CAPTRPPATPAGAT 2258
>gb|CB669908.1|CB669908 OSJNEe02L13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02L13 3', mRNA sequence
Length = 792
Score = 184 bits (397), Expect(2) = 3e-062
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -1
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 585 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 406
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 405 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 226
Query: 489 GEDEFE 506
GE++ E
Sbjct: 225 GEEDDE 208
Score = 161 bits (347), Expect(2) = 1e-046
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +2
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 209 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 388
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 389 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 538
Score = 107 bits (229), Expect(2) = 3e-025
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -3
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 487 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 308
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 307 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 218
Score = 78.0 bits (164), Expect(2) = 3e-062
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3 / -1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPP 131
RADPATGYPGR+YRFY+G V+ FGYGLSYSK+S R P
Sbjct: 720 RADPATGYPGRSYRFYQGNPVYKFGYGLSYSKFSRRLVAAAKP 592
Score = 48.7 bits (100), Expect(2) = 1e-046
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / +2
Query: 130 GGGFVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
G +R E LE*LRP*P L T P * R +RPG*PVAGSAR
Sbjct: 593 GFAAATRRRENLE*LRP*PNL*TGLPW*KR*LRPG*PVAGSAR 721
Score = 32.7 bits (65), Expect(2) = 3e-025
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -2
Query: 1 CAPTRPRATPAGRT 42
CAPTRP ATPAG T
Sbjct: 722 CAPTRPPATPAGAT 681
>gb|CB642595.1|CB642595 OSJNEb02N16.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb02N16 5', mRNA sequence
Length = 742
Score = 184 bits (397), Expect(2) = 3e-062
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -1
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 535 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 356
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 355 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 176
Query: 489 GEDEFE 506
GE++ E
Sbjct: 175 GEEDDE 158
Score = 161 bits (347), Expect(2) = 1e-046
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +3
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 159 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 338
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 339 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 488
Score = 107 bits (229), Expect(2) = 3e-025
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -3
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 437 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 258
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 257 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 168
Score = 78.0 bits (164), Expect(2) = 3e-062
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3 / -1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPP 131
RADPATGYPGR+YRFY+G V+ FGYGLSYSK+S R P
Sbjct: 670 RADPATGYPGRSYRFYQGNPVYKFGYGLSYSKFSRRLVAAAKP 542
Score = 48.7 bits (100), Expect(2) = 1e-046
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / +3
Query: 130 GGGFVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
G +R E LE*LRP*P L T P * R +RPG*PVAGSAR
Sbjct: 543 GFAAATRRRENLE*LRP*PNL*TGLPW*KR*LRPG*PVAGSAR 671
Score = 32.7 bits (65), Expect(2) = 3e-025
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -2
Query: 1 CAPTRPRATPAGRT 42
CAPTRP ATPAG T
Sbjct: 672 CAPTRPPATPAGAT 631
>ref|NT_107119.1| Oryza sativa (japonica cultivar-group)
Length = 938023
Score = 100 bits (213), Expect(3) = 5e-061
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = +3 / +2
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP +QLIGF+S HL+ + A++ F++SPC+HFSR +DG+KVID+GSH++MV +DE E+
Sbjct: 66461 GRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVIDRGSHYLMVDKDELEI 66640
Query: 510 SFMA* 524
F A*
Sbjct: 66641 RFEA* 66655
Score = 95.5 bits (202), Expect(3) = 5e-061
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +3 / +2
Query: 135 SNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+N+ T+ G SY +E IG++ C++LKFPAVV VQNHGPMDGKHSVL+++RWPN
Sbjct: 66272 TNLLASLRTTTTSEGDESYHIEEIGTDGCEQLKFPAVVEVQNHGPMDGKHSVLMYLRWPN 66451
Query: 315 ATDG 326
A G
Sbjct: 66452 AKGG 66463
Score = 91.3 bits (193), Expect(3) = 2e-052
Identities = 35/62 (56%), Positives = 46/62 (74%)
Frame = +3 / +3
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP QLIGF++ HL+ + ++ E+SPC+H SRA DG KVID+GSHF+MV EDE E+
Sbjct: 27459 GRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVIDRGSHFLMVEEDELEI 27638
Query: 510 SF 515
F
Sbjct: 27639 RF 27644
Score = 81.3 bits (171), Expect(3) = 5e-061
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +3 / +2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKA 158
RADPATGYPGR+YRFY+G TV+ FGYGLSYS YS + + P + L A
Sbjct: 66131 RADPATGYPGRSYRFYQGKTVYKFGYGLSYSSYSRQLVSGGKPAESYTNLLA 66286
Score = 81.3 bits (171), Expect(3) = 2e-052
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +3 / +3
Query: 168 TAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDG 326
T G A Y V+ IG + C+RL+FP +V VQNHGPMDGKH+VL+F+RW + G
Sbjct: 27303 TPEGDAVYRVDEIGDDRCERLRFPVMVEVQNHGPMDGKHTVLMFVRWSSTDGG 27461
Score = 79.4 bits (167), Expect(3) = 3e-038
Identities = 33/55 (60%), Positives = 35/55 (63%)
Frame = -2 / -1
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAVAS 161
P L R N ST C PSMGPWFCT T GNLSRSH S PI+ST * A P V +
Sbjct: 27460 PPSVLDHRTNISTVCLPSMGPWFCTSTMTGNLSRSHRSSPISSTR*TASPSGVVA 27296
Score = 75.8 bits (159), Expect(3) = 6e-038
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -2 / -2
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
P +A G R STEC PSMGPWFCT TTAGNLS S S PI+S *L+ P V
Sbjct: 66462 PPLAFGHRRYMSTECLPSMGPWFCTSTTAGNLSCSQPSVPISSMW*LSSPSDV 66304
Score = 75.3 bits (158), Expect(3) = 2e-052
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +3 / +3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFAT 119
R DPATGYPGR+YRFY+G TV+ FGYGLSYSK++ R +
Sbjct: 27126 RPDPATGYPGRSYRFYKGKTVYKFGYGLSYSKFACRIVS 27242
Score = 74.8 bits (157), Expect(3) = 6e-038
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = -2 / -2
Query: 541 FQHNRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRL 362
F ++ A LISNSS T+ +P SITFLPS + LKC GL SN A LRC L
Sbjct: 66672 FPPSKTQASNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWL 66493
Query: 361 WNPISWLAGRP 329
PISW+ GRP
Sbjct: 66492 LKPISWVVGRP 66460
Score = 73.5 bits (154), Expect(3) = 3e-038
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = -2 / -1
Query: 532 NRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNP 353
++ + LISNSSS T+ KC+P SITF PS++A L+C GL S LRC NP
Sbjct: 27661 SKTQSWNLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNP 27482
Query: 352 ISWLAGRP 329
IS L GRP
Sbjct: 27481 ISCLTGRP 27458
Score = 48.7 bits (100), Expect(3) = 6e-038
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -2 / -2
Query: 103 EYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
E LE*LRP*P L TV P * R +RPG*PVAGSAR
Sbjct: 66231 E*LE*LRP*PNL*TVLPW*KR*LRPG*PVAGSAR 66130
Score = 47.3 bits (97), Expect(3) = 3e-038
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -2 / -1
Query: 97 LE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
LE*LRP P L TV P *NR +RPG*PVAGS R
Sbjct: 27220 LE*LRPYPNL*TVLPL*NR*LRPG*PVAGSGR 27125
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0045P14, complete sequence
Length = 121894
Score = 100 bits (213), Expect(3) = 5e-061
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = +3 / +2
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP +QLIGF+S HL+ + A++ F++SPC+HFSR +DG+KVID+GSH++MV +DE E+
Sbjct: 66461 GRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVIDRGSHYLMVDKDELEI 66640
Query: 510 SFMA* 524
F A*
Sbjct: 66641 RFEA* 66655
Score = 95.5 bits (202), Expect(3) = 5e-061
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +3 / +2
Query: 135 SNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+N+ T+ G SY +E IG++ C++LKFPAVV VQNHGPMDGKHSVL+++RWPN
Sbjct: 66272 TNLLASLRTTTTSEGDESYHIEEIGTDGCEQLKFPAVVEVQNHGPMDGKHSVLMYLRWPN 66451
Query: 315 ATDG 326
A G
Sbjct: 66452 AKGG 66463
Score = 91.3 bits (193), Expect(3) = 3e-052
Identities = 35/62 (56%), Positives = 46/62 (74%)
Frame = +3 / +3
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP QLIGF++ HL+ + ++ E+SPC+H SRA DG KVID+GSHF+MV EDE E+
Sbjct: 27459 GRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVIDRGSHFLMVEEDELEI 27638
Query: 510 SF 515
F
Sbjct: 27639 RF 27644
Score = 81.3 bits (171), Expect(3) = 5e-061
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +3 / +2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKA 158
RADPATGYPGR+YRFY+G TV+ FGYGLSYS YS + + P + L A
Sbjct: 66131 RADPATGYPGRSYRFYQGKTVYKFGYGLSYSSYSRQLVSGGKPAESYTNLLA 66286
Score = 81.3 bits (171), Expect(3) = 3e-052
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +3 / +3
Query: 168 TAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDG 326
T G A Y V+ IG + C+RL+FP +V VQNHGPMDGKH+VL+F+RW + G
Sbjct: 27303 TPEGDAVYRVDEIGDDRCERLRFPVMVEVQNHGPMDGKHTVLMFVRWSSTDGG 27461
Score = 79.4 bits (167), Expect(3) = 3e-038
Identities = 33/55 (60%), Positives = 35/55 (63%)
Frame = -2 / -1
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAVAS 161
P L R N ST C PSMGPWFCT T GNLSRSH S PI+ST * A P V +
Sbjct: 27460 PPSVLDHRTNISTVCLPSMGPWFCTSTMTGNLSRSHRSSPISSTR*TASPSGVVA 27296
Score = 75.8 bits (159), Expect(3) = 6e-038
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -2 / -2
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
P +A G R STEC PSMGPWFCT TTAGNLS S S PI+S *L+ P V
Sbjct: 66462 PPLAFGHRRYMSTECLPSMGPWFCTSTTAGNLSCSQPSVPISSMW*LSSPSDV 66304
Score = 75.3 bits (158), Expect(3) = 3e-052
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +3 / +3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFAT 119
R DPATGYPGR+YRFY+G TV+ FGYGLSYSK++ R +
Sbjct: 27126 RPDPATGYPGRSYRFYKGKTVYKFGYGLSYSKFACRIVS 27242
Score = 74.8 bits (157), Expect(3) = 6e-038
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = -2 / -2
Query: 541 FQHNRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRL 362
F ++ A LISNSS T+ +P SITFLPS + LKC GL SN A LRC L
Sbjct: 66672 FPPSKTQASNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWL 66493
Query: 361 WNPISWLAGRP 329
PISW+ GRP
Sbjct: 66492 LKPISWVVGRP 66460
Score = 73.5 bits (154), Expect(3) = 3e-038
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = -2 / -1
Query: 532 NRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNP 353
++ + LISNSSS T+ KC+P SITF PS++A L+C GL S LRC NP
Sbjct: 27661 SKTQSWNLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNP 27482
Query: 352 ISWLAGRP 329
IS L GRP
Sbjct: 27481 ISCLTGRP 27458
Score = 48.7 bits (100), Expect(3) = 6e-038
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -2 / -2
Query: 103 EYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
E LE*LRP*P L TV P * R +RPG*PVAGSAR
Sbjct: 66231 E*LE*LRP*PNL*TVLPW*KR*LRPG*PVAGSAR 66130
Score = 47.3 bits (97), Expect(3) = 3e-038
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -2 / -1
Query: 97 LE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
LE*LRP P L TV P *NR +RPG*PVAGS R
Sbjct: 27220 LE*LRPYPNL*TVLPL*NR*LRPG*PVAGSGR 27125
>gb|AACV01022886.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022886, whole
genome shotgun sequence
Length = 32627
Score = 100 bits (213), Expect(3) = 5e-061
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = +3 / -3
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP +QLIGF+S HL+ + A++ F++SPC+HFSR +DG+KVID+GSH++MV +DE E+
Sbjct: 17271 GRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVIDRGSHYLMVDKDELEI 17092
Query: 510 SFMA* 524
F A*
Sbjct: 17091 RFEA* 17077
Score = 95.5 bits (202), Expect(3) = 5e-061
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +3 / -3
Query: 135 SNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+N+ T+ G SY +E IG++ C++LKFPAVV VQNHGPMDGKHSVL+++RWPN
Sbjct: 17460 TNLLASLRTTTTSEGDESYHIEEIGTDGCEQLKFPAVVEVQNHGPMDGKHSVLMYLRWPN 17281
Query: 315 ATDG 326
A G
Sbjct: 17280 AKGG 17269
Score = 81.3 bits (171), Expect(3) = 5e-061
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKA 158
RADPATGYPGR+YRFY+G TV+ FGYGLSYS YS + + P + L A
Sbjct: 17601 RADPATGYPGRSYRFYQGKTVYKFGYGLSYSSYSRQLVSGGKPAESYTNLLA 17446
Score = 75.8 bits (159), Expect(3) = 6e-038
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -2 / +2
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
P +A G R STEC PSMGPWFCT TTAGNLS S S PI+S *L+ P V
Sbjct: 17270 PPLAFGHRRYMSTECLPSMGPWFCTSTTAGNLSCSQPSVPISSMW*LSSPSDV 17428
Score = 74.8 bits (157), Expect(3) = 6e-038
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = -2 / +2
Query: 541 FQHNRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRL 362
F ++ A LISNSS T+ +P SITFLPS + LKC GL SN A LRC L
Sbjct: 17060 FPPSKTQASNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWL 17239
Query: 361 WNPISWLAGRP 329
PISW+ GRP
Sbjct: 17240 LKPISWVVGRP 17272
Score = 48.7 bits (100), Expect(3) = 6e-038
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -2 / +2
Query: 103 EYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
E LE*LRP*P L TV P * R +RPG*PVAGSAR
Sbjct: 17501 E*LE*LRP*PNL*TVLPW*KR*LRPG*PVAGSAR 17602
>dbj|AK109882.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D05, full
insert sequence
Length = 2714
Score = 100 bits (213), Expect(3) = 5e-061
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = +3 / +1
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP +QLIGF+S HL+ + A++ F++SPC+HFSR +DG+KVID+GSH++MV +DE E+
Sbjct: 2209 GRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVIDRGSHYLMVDKDELEI 2388
Query: 510 SFMA* 524
F A*
Sbjct: 2389 RFEA* 2403
Score = 95.5 bits (202), Expect(3) = 5e-061
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +3 / +1
Query: 135 SNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+N+ T+ G SY +E IG++ C++LKFPAVV VQNHGPMDGKHSVL+++RWPN
Sbjct: 2020 TNLLASLRTTTTSEGDESYHIEEIGTDGCEQLKFPAVVEVQNHGPMDGKHSVLMYLRWPN 2199
Query: 315 ATDG 326
A G
Sbjct: 2200 AKGG 2211
Score = 81.3 bits (171), Expect(3) = 5e-061
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTSNVAGLKA 158
RADPATGYPGR+YRFY+G TV+ FGYGLSYS YS + + P + L A
Sbjct: 1879 RADPATGYPGRSYRFYQGKTVYKFGYGLSYSSYSRQLVSGGKPAESYTNLLA 2034
Score = 75.8 bits (159), Expect(3) = 7e-038
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -2 / -1
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAV 167
P +A G R STEC PSMGPWFCT TTAGNLS S S PI+S *L+ P V
Sbjct: 2210 PPLAFGHRRYMSTECLPSMGPWFCTSTTAGNLSCSQPSVPISSMW*LSSPSDV 2052
Score = 74.8 bits (157), Expect(3) = 7e-038
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = -2 / -1
Query: 541 FQHNRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRL 362
F ++ A LISNSS T+ +P SITFLPS + LKC GL SN A LRC L
Sbjct: 2420 FPPSKTQASNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWL 2241
Query: 361 WNPISWLAGRP 329
PISW+ GRP
Sbjct: 2240 LKPISWVVGRP 2208
Score = 48.7 bits (100), Expect(3) = 7e-038
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -2 / -1
Query: 103 EYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
E LE*LRP*P L TV P * R +RPG*PVAGSAR
Sbjct: 1979 E*LE*LRP*PNL*TVLPW*KR*LRPG*PVAGSAR 1878
>gb|AACV01022860.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022860, whole
genome shotgun sequence
Length = 86978
Score = 98.7 bits (209), Expect(3) = 1e-059
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = +3 / -1
Query: 318 TDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGED 497
T GRPA QLIGF+S H++ + A V FEVSPC+HFS EDG +VID G+HF+MVG++
Sbjct: 53927 TTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVIDGGAHFLMVGDE 53748
Query: 498 EFEMSF 515
E E SF
Sbjct: 53747 ELETSF 53730
Score = 92.3 bits (195), Expect(3) = 1e-059
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +3 / -1
Query: 174 GGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDG 326
GGM+SY V+ IG E C RL FPAVV VQNHGPMDGKHSVL+++RWP + G
Sbjct: 54065 GGMSSYLVKEIGVERCSRLVFPAVVEVQNHGPMDGKHSVLMYLRWPTTSGG 53913
Score = 81.7 bits (172), Expect(3) = 2e-035
Identities = 32/51 (62%), Positives = 36/51 (70%)
Frame = -2 / +1
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPP 173
P + +G R STEC PSMGPWFCT TTAG SR H+S PI+ T *L MPP
Sbjct: 53914 PPLVVGHRRYMSTECLPSMGPWFCTSTTAGKTSRLHLSTPISLTR*LLMPP 54066
Score = 81.7 bits (172), Expect(3) = 1e-059
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3 / -1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHR 110
RADPATGYPGR+YRFY+G TV+NFGYGLSYSK+S R
Sbjct: 54257 RADPATGYPGRSYRFYQGNTVYNFGYGLSYSKFSRR 54150
Score = 56.5 bits (117), Expect(3) = 2e-035
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = -1 / +3
Query: 542 LPTQPGSRHEAHLELILADHHEVRALIDHLPAILRRPAEVLAGAHLELHVRRLRRPQVQA 363
+P+ + +A L+L++ +H ++ IDH A+L PAE+LA AHLE H L + A
Sbjct: 53703 IPSTQPPKAKAGLQLLIPNHEKMSPSIDHPLAVLPHPAEMLARAHLEAHHGLLPYLDMLA 53882
Query: 362 LEPDQL 345
EPDQL
Sbjct: 53883 PEPDQL 53900
Score = 52.8 bits (109), Expect(3) = 2e-035
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = -2 / +1
Query: 109 RWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
R E LE*LRP*PKL TV P * R +RPG*PVAGSAR
Sbjct: 54151 RRENLE*LRP*PKL*TVLPW*KR*LRPG*PVAGSAR 54258
>gb|AACV01022882.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022882, whole
genome shotgun sequence
Length = 28515
Score = 91.3 bits (193), Expect(3) = 3e-052
Identities = 35/62 (56%), Positives = 46/62 (74%)
Frame = +3 / -1
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP QLIGF++ HL+ + ++ E+SPC+H SRA DG KVID+GSHF+MV EDE E+
Sbjct: 22137 GRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVIDRGSHFLMVEEDELEI 21958
Query: 510 SF 515
F
Sbjct: 21957 RF 21952
Score = 81.3 bits (171), Expect(3) = 3e-052
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +3 / -1
Query: 168 TAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDG 326
T G A Y V+ IG + C+RL+FP +V VQNHGPMDGKH+VL+F+RW + G
Sbjct: 22293 TPEGDAVYRVDEIGDDRCERLRFPVMVEVQNHGPMDGKHTVLMFVRWSSTDGG 22135
Score = 79.4 bits (167), Expect(3) = 3e-038
Identities = 33/55 (60%), Positives = 35/55 (63%)
Frame = -2 / +2
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAVAS 161
P L R N ST C PSMGPWFCT T GNLSRSH S PI+ST * A P V +
Sbjct: 22136 PPSVLDHRTNISTVCLPSMGPWFCTSTMTGNLSRSHRSSPISSTR*TASPSGVVA 22300
Score = 75.3 bits (158), Expect(3) = 3e-052
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +3 / -1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFAT 119
R DPATGYPGR+YRFY+G TV+ FGYGLSYSK++ R +
Sbjct: 22470 RPDPATGYPGRSYRFYKGKTVYKFGYGLSYSKFACRIVS 22354
Score = 73.5 bits (154), Expect(3) = 3e-038
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = -2 / +2
Query: 532 NRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNP 353
++ + LISNSSS T+ KC+P SITF PS++A L+C GL S LRC NP
Sbjct: 21935 SKTQSWNLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNP 22114
Query: 352 ISWLAGRP 329
IS L GRP
Sbjct: 22115 ISCLTGRP 22138
Score = 47.3 bits (97), Expect(3) = 3e-038
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -2 / +2
Query: 97 LE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
LE*LRP P L TV P *NR +RPG*PVAGS R
Sbjct: 22376 LE*LRPYPNL*TVLPL*NR*LRPG*PVAGSGR 22471
>dbj|AK070171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O20, full
insert sequence
Length = 2515
Score = 91.3 bits (193), Expect(3) = 9e-052
Identities = 35/62 (56%), Positives = 46/62 (74%)
Frame = +3 / +2
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
GRP QLIGF++ HL+ + ++ E+SPC+H SRA DG KVID+GSHF+MV EDE E+
Sbjct: 2192 GRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVIDRGSHFLMVEEDELEI 2371
Query: 510 SF 515
F
Sbjct: 2372 RF 2377
Score = 79.4 bits (167), Expect(3) = 9e-052
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +3 / +2
Query: 168 TAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDG 326
T G A Y V+ IG + C+RL FP +V VQNHGPMDGKH+VL+F+RW + G
Sbjct: 2036 TPEGDAVYRVDEIGDDRCERLGFPVMVEVQNHGPMDGKHTVLMFVRWSSTDGG 2194
Score = 76.2 bits (160), Expect(3) = 1e-037
Identities = 32/55 (58%), Positives = 34/55 (61%)
Frame = -2 / -2
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMPPAVAS 161
P L R N ST C PSMGPWFCT T GN SRSH S PI+ST * A P V +
Sbjct: 2193 PPSVLDHRTNISTVCLPSMGPWFCTSTMTGNPSRSHRSSPISSTR*TASPSGVVA 2029
Score = 75.3 bits (158), Expect(3) = 9e-052
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +3 / +2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFAT 119
R DPATGYPGR+YRFY+G TV+ FGYGLSYSK++ R +
Sbjct: 1859 RPDPATGYPGRSYRFYKGKTVYKFGYGLSYSKFACRIVS 1975
Score = 74.8 bits (157), Expect(3) = 1e-037
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = -2 / -2
Query: 532 NRDHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNP 353
++ + LISNSSS T+ KC+P SITF PS++A LKC GL S LRC NP
Sbjct: 2394 SKTQSWNLISNSSSSTMRKCDPLSITFSPSTLALLKCSHGLISIFNFFFSPTLRCWFLNP 2215
Query: 352 ISWLAGRP 329
IS L GRP
Sbjct: 2214 ISCLTGRP 2191
Score = 47.3 bits (97), Expect(3) = 1e-037
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -2 / -2
Query: 97 LE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
LE*LRP P L TV P *NR +RPG*PVAGS R
Sbjct: 1953 LE*LRPYPNL*TVLPL*NR*LRPG*PVAGSGR 1858
>gb|CB645318.1|CB645318 OSJNEb06O17.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06O17 5', mRNA sequence
Length = 720
Score = 184 bits (397), Expect(2) = 3e-050
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -1
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 633 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 454
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 453 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 274
Query: 489 GEDEFE 506
GE++ E
Sbjct: 273 GEEDDE 256
Score = 161 bits (347), Expect(2) = 2e-039
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +2
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 257 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 436
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 437 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 586
Score = 107 bits (229), Expect = 1e-021
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -3
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 535 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 356
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 355 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 266
Score = 37.7 bits (76), Expect(2) = 3e-050
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3 / -1
Query: 51 RGPTVFNFGYGLSYSKYSHRFATKPPP 131
+G V+ FGYGLSYSK+S R P
Sbjct: 720 QGNPVYKFGYGLSYSKFSRRLVAAAKP 640
Score = 24.4 bits (47), Expect(2) = 2e-039
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / +2
Query: 130 GGGFVAKRWEYLE*LRP*PKLNT 62
G +R E LE*LRP*P L T
Sbjct: 641 GFAAATRRRENLE*LRP*PNL*T 709
>gb|CB655149.1|CB655149 OSJNEc08E11.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08E11 3', mRNA sequence
Length = 765
Score = 184 bits (397), Expect(2) = 4e-050
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -3
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 679 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 500
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 499 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 320
Query: 489 GEDEFE 506
GE++ E
Sbjct: 319 GEEDDE 302
Score = 161 bits (347), Expect(2) = 2e-039
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +3
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 303 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 482
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 483 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 632
Score = 107 bits (229), Expect = 1e-021
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 581 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 402
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 401 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 312
Score = 37.3 bits (75), Expect(2) = 4e-050
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3 / -3
Query: 54 GPTVFNFGYGLSYSKYSHRFATKPPP 131
G V+ FGYGLSYSK+S R P
Sbjct: 763 GNPVYKFGYGLSYSKFSRRLVAAAKP 686
Score = 24.4 bits (47), Expect(2) = 2e-039
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / +3
Query: 130 GGGFVAKRWEYLE*LRP*PKLNT 62
G +R E LE*LRP*P L T
Sbjct: 687 GFAAATRRRENLE*LRP*PNL*T 755
>gb|AU075385.1|AU075385 AU075385 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2937_4Z, mRNA sequence
Length = 485
Score = 185 bits (398), Expect = 4e-045
Identities = 72/91 (79%), Positives = 80/91 (87%)
Frame = +3 / +3
Query: 255 QNHGPMDGKHSVLVFMRWPNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSR 434
QNHGPMDG+H VL+F+RWPN GRPASQLIGFQSLHL++ QT HVEFEVSPCKHFSR
Sbjct: 3 QNHGPMDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSR 182
Query: 435 ATEDGRKVIDQGSHFVMVGEDEFEMSFMA*S 527
ATEDG+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 183 ATEDGKKVIDHGSHFMMVGDDEFEMSFTP*S 275
Score = 167 bits (359), Expect = 9e-040
Identities = 67/91 (73%), Positives = 72/91 (79%)
Frame = -2 / -2
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPIS 347
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PIS
Sbjct: 274 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPIS 95
Query: 346 WLAGRPLPSVALGQRMNTSTECFPSMGPWFC 254
WLAG P + GQR +ST C PSMGPWFC
Sbjct: 94 WLAGLPPSAAPFGQRRKSSTGCLPSMGPWFC 2
Score = 128 bits (274), Expect = 6e-028
Identities = 58/91 (63%), Positives = 68/91 (74%)
Frame = +2 / +2
Query: 254 AEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVRGEPLQALQP 433
AEP HGR+A A + ALA+R G +R AG+PADR+PEPAP+ DAD GVRGEP+QALQ
Sbjct: 2 AEPWPHGRQAPRAALPALAERRGGRRQAGEPADRLPEPAPQVDADCPCGVRGEPMQALQQ 181
Query: 434 GDGGWQEGDRSGLALRDGRRG*VRDELHGVI 526
DGG QEGD S +A DG R *VRDELH +I
Sbjct: 182 SDGGRQEGD*SWVAFHDGWR**VRDELHALI 274
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 184 bits (397), Expect = 5e-045
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -2
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 9499004 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 9498825
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 9498824 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 9498645
Query: 489 GEDEFE 506
GE++ E
Sbjct: 9498644 GEEDDE 9498627
Score = 161 bits (347), Expect = 4e-038
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +1
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 9498628 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 9498807
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 9498808 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 9498957
Score = 107 bits (229), Expect = 1e-021
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -1
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 9498906 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 9498727
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 9498726 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 9498637
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 184 bits (397), Expect = 5e-045
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -2
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 10509557 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 10509378
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 10509377 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 10509198
Query: 489 GEDEFE 506
GE++ E
Sbjct: 10509197 GEEDDE 10509180
Score = 161 bits (347), Expect = 4e-038
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +1
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 10509181 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 10509360
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 10509361 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 10509510
Score = 107 bits (229), Expect = 1e-021
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -1
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 10509459 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 10509280
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 10509279 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 10509190
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 184 bits (397), Expect = 5e-045
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +3 / -1
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 10581101 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 10580922
Query: 309 PNATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMV 488
PNAT G+ RPA QL+GF S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ V
Sbjct: 10580921 PNATAGASRPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKV 10580742
Query: 489 GEDEFE 506
GE++ E
Sbjct: 10580741 GEEDDE 10580724
Score = 161 bits (347), Expect = 4e-038
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +1
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 10580725 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 10580904
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 10580905 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 10581054
Score = 107 bits (229), Expect = 1e-021
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -3
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 10581003 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 10580824
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 10580823 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 10580734
>gb|CB649907.1|CB649907 OSJNEb14B16.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14B16 3', mRNA sequence
Length = 736
Score = 183 bits (395), Expect = 1e-044
Identities = 72/110 (65%), Positives = 86/110 (78%)
Frame = +3 / -3
Query: 177 GMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDGSGRPASQLIG 356
G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RWPNAT G+ RPA QL+G
Sbjct: 707 GGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRWPNATAGASRPARQLVG 528
Query: 357 FQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFE 506
F S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ VGE++ E
Sbjct: 527 FSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKVGEEDDE 378
Score = 161 bits (347), Expect = 4e-038
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +1
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 379 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 558
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 559 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 708
Score = 107 bits (229), Expect = 1e-021
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -2
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 657 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 478
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 477 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 388
>gb|CB649953.1|CB649953 OSJNEb14C16.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14C16 3', mRNA sequence
Length = 739
Score = 183 bits (395), Expect = 1e-044
Identities = 72/110 (65%), Positives = 86/110 (78%)
Frame = +3 / -1
Query: 177 GMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDGSGRPASQLIG 356
G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RWPNAT G+ RPA QL+G
Sbjct: 706 GGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRWPNATAGASRPARQLVG 527
Query: 357 FQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFE 506
F S H+RA + A + E++PC+H SRA EDG KVID+GSHF+ VGE++ E
Sbjct: 526 FSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKVGEEDDE 377
Score = 161 bits (347), Expect = 4e-038
Identities = 71/110 (64%), Positives = 80/110 (72%)
Frame = -2 / +3
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S+SSSPT+ KC+P SITF+PSS+ARL+C GL S A AL C L NP S LAGR
Sbjct: 378 SSSSSPTLRKCDPRSITFVPSSLARLRCSHGLISIVNLAFSPALTC*LLNPTSCLAGRLA 557
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LAMP 176
P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST *L+ P
Sbjct: 558 PAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW*LSPP 707
Score = 107 bits (229), Expect = 1e-021
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +2 / -3
Query: 227 AQVPGGGAGAEPRAHGREALGAGVHALAQRDGRQRPAGQPADRVPEPAPEGDADGARGVR 406
AQVPG GA+PRAHGR+ALGAGV +A+RDG PAG+ A RV + A +G +G
Sbjct: 656 AQVPGHRGGAQPRAHGRQALGAGVRPVAERDGGGEPAGEAAGRVQQSACQGGGEGEVDDG 477
Query: 407 GEPLQALQPGDGGWQEGDRSGLALRDGRRG 496
+P++A +PG+GG EGDR +A GR G
Sbjct: 476 DQPVRAPEPGEGGRHEGDRPRIAFPQGRGG 387
>gb|CB654985.1|CB654985 OSJNEc07P05.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07P05 5', mRNA sequence
Length = 757
Score = 121 bits (258), Expect(2) = 3e-043
Identities = 49/82 (59%), Positives = 56/82 (68%)
Frame = +3 / +3
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 510 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 689
Query: 309 PNATDGSGRPASQLIGFQSLHL 374
PNAT G+ RPA QL+GF S H+
Sbjct: 690 PNATAGASRPARQLVGFSSQHV 755
Score = 107 bits (229), Expect(2) = 1e-030
Identities = 46/67 (68%), Positives = 49/67 (73%)
Frame = -2 / -1
Query: 376 LRCRLWNPISWLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIAS 197
L C L NP S LAGR P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+S
Sbjct: 757 LTC*LLNPTSCLAGRLAPAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISS 578
Query: 196 TS*LAMP 176
T *L+ P
Sbjct: 577 TW*LSPP 557
Score = 78.0 bits (164), Expect(2) = 3e-043
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3 / +3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPP 131
RADPATGYPGR+YRFY+G V+ FGYGLSYSK+S R P
Sbjct: 375 RADPATGYPGRSYRFYQGNPVYKFGYGLSYSKFSRRLVAAAKP 503
Score = 48.7 bits (100), Expect(2) = 1e-030
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / -1
Query: 130 GGGFVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
G +R E LE*LRP*P L T P * R +RPG*PVAGSAR
Sbjct: 502 GFAAATRRRENLE*LRP*PNL*TGLPW*KR*LRPG*PVAGSAR 374
>gb|CB669907.1|CB669907 OSJNEe02L13.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02L13 5', mRNA sequence
Length = 788
Score = 120 bits (257), Expect(2) = 4e-043
Identities = 49/81 (60%), Positives = 55/81 (67%)
Frame = +3 / +1
Query: 129 PTSNVAGLKAVEATAGGMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRW 308
P N+ + G SY VE IG E C+RLKFPA V V NHGPMDGKHSVLVF+RW
Sbjct: 544 PNRNLLAGVIPKPAGDGGESYHVEEIGEEGCERLKFPATVEVHNHGPMDGKHSVLVFVRW 723
Query: 309 PNATDGSGRPASQLIGFQSLH 371
PNAT G+ RPA QL+GF S H
Sbjct: 724 PNATAGASRPARQLVGFSSQH 786
Score = 106 bits (226), Expect(2) = 4e-030
Identities = 45/65 (69%), Positives = 48/65 (73%)
Frame = -2 / -1
Query: 370 CRLWNPISWLAGRPLPSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS 191
C L NP S LAGR P+VA G R NTSTEC PSMGPW CT T AGNLSRSH S PI+ST
Sbjct: 785 C*LLNPTSCLAGRLAPAVAFGHRTNTSTECLPSMGPWLCTSTVAGNLSRSHPSSPISSTW 606
Query: 190 *LAMP 176
*L+ P
Sbjct: 605 *LSPP 591
Score = 78.0 bits (164), Expect(2) = 4e-043
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPP 131
RADPATGYPGR+YRFY+G V+ FGYGLSYSK+S R P
Sbjct: 409 RADPATGYPGRSYRFYQGNPVYKFGYGLSYSKFSRRLVAAAKP 537
Score = 48.7 bits (100), Expect(2) = 4e-030
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / -1
Query: 130 GGGFVAKRWEYLE*LRP*PKLNTVGPR*NRYVRPG*PVAGSAR 2
G +R E LE*LRP*P L T P * R +RPG*PVAGSAR
Sbjct: 536 GFAAATRRRENLE*LRP*PNL*TGLPW*KR*LRPG*PVAGSAR 408
>gb|CB673206.1|CB673206 OSJNEe07K02.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07K02 5', mRNA sequence
Length = 455
Score = 158 bits (339), Expect = 5e-037
Identities = 64/111 (57%), Positives = 78/111 (70%)
Frame = +3 / -1
Query: 177 GMASYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDGSGRPASQLIG 356
G SY V IG E C+RLKFP+ V V +HGPMDGKHSVLVF+RWP G+ RPA QL+G
Sbjct: 455 GGESYHV*EIGEEGCERLKFPSPVEVHSHGPMDGKHSVLVFVRWPIVLAGASRPARQLVG 276
Query: 357 FQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
F S H+RA + E++PC+H SRA EDG KVI GSHF+ VGE+ E+
Sbjct: 275 FSSQHVRAGAKVRLTMEINPCEHLSRAREDGTKVIH*GSHFLKVGEEAVEL 123
Score = 144 bits (308), Expect = 1e-032
Identities = 64/108 (59%), Positives = 73/108 (67%)
Frame = -2 / +1
Query: 505 SNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPISWLAGRPL 326
S +SSPT+ KC+P ITF+PSS+ARLKC GL S AL C L NP S LAGR
Sbjct: 127 STASSPTLRKCDPQWITFVPSSLARLKCSHGLISIVNLTFAPALTC*LLNPTSCLAGRLA 306
Query: 325 PSVALGQRMNTSTECFPSMGPWFCTRTTAGNLSRSHVSDPIASTS*LA 182
P+ +G R NTSTEC PSMGPW CT T GNLSRSH S PI+ T *L+
Sbjct: 307 PANTIGHRTNTSTECLPSMGPWLCTSTGDGNLSRSHPSSPISYTW*LS 450
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 72.5 bits (152), Expect(3) = 1e-032
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +3 / -2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RAD + GYPGRTYRFY G V+ FGYGLSYSKYS+ P S
Sbjct: 4348802 RADASRGYPGRTYRFYTGDVVYGFGYGLSYSKYSYSILQAPKKIS 4348668
Score = 67.5 bits (141), Expect(3) = 1e-032
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +3 / -2
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
G P QL+GF+ +H A ++ VE V PCK S A +G +V+ G+H +MVG++E E+
Sbjct: 4348466 GSPIKQLVGFERVHTAAGRSTDVEITVDPCKLMSFANTEGTRVLFLGTHVLMVGDEEHEL 4348287
Query: 510 SFMA*SR 530
A* R
Sbjct: 4348286 LIEA*QR 4348266
Score = 40.9 bits (83), Expect(3) = 1e-032
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 216 TCDRLKFPAVVRVQNHGPMDGKHSVLVF 299
+C+ L+FP + V N G MDG H+VL+F
Sbjct: 4348574 SCEALQFPVHISVSNDGAMDGSHAVLLF 4348491
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 72.5 bits (152), Expect(3) = 1e-032
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RAD + GYPGRTYRFY G V+ FGYGLSYSKYS+ P S
Sbjct: 293968 RADASRGYPGRTYRFYTGDVVYGFGYGLSYSKYSYSILQAPKKIS 293834
Score = 67.5 bits (141), Expect(3) = 1e-032
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +3 / -3
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
G P QL+GF+ +H A ++ VE V PCK S A +G +V+ G+H +MVG++E E+
Sbjct: 293632 GSPIKQLVGFERVHTAAGRSTDVEITVDPCKLMSFANTEGTRVLFLGTHVLMVGDEEHEL 293453
Query: 510 SFMA*SR 530
A* R
Sbjct: 293452 LIEA*QR 293432
Score = 40.9 bits (83), Expect(3) = 1e-032
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -3
Query: 216 TCDRLKFPAVVRVQNHGPMDGKHSVLVF 299
+C+ L+FP + V N G MDG H+VL+F
Sbjct: 293740 SCEALQFPVHISVSNDGAMDGSHAVLLF 293657
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
complete sequence
Length = 171551
Score = 72.5 bits (152), Expect(3) = 2e-032
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +3 / -1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RAD + GYPGRTYRFY G V+ FGYGLSYSKYS+ P S
Sbjct: 158024 RADASRGYPGRTYRFYTGDVVYGFGYGLSYSKYSYSILQAPKKIS 157890
Score = 67.5 bits (141), Expect(3) = 2e-032
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +3 / -1
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
G P QL+GF+ +H A ++ VE V PCK S A +G +V+ G+H +MVG++E E+
Sbjct: 157688 GSPIKQLVGFERVHTAAGRSTDVEITVDPCKLMSFANTEGTRVLFLGTHVLMVGDEEHEL 157509
Query: 510 SFMA*SR 530
A* R
Sbjct: 157508 LIEA*QR 157488
Score = 40.9 bits (83), Expect(3) = 2e-032
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -1
Query: 216 TCDRLKFPAVVRVQNHGPMDGKHSVLVF 299
+C+ L+FP + V N G MDG H+VL+F
Sbjct: 157796 SCEALQFPVHISVSNDGAMDGSHAVLLF 157713
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01,
complete sequence
Length = 140454
Score = 72.5 bits (152), Expect(3) = 2e-032
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RAD + GYPGRTYRFY G V+ FGYGLSYSKYS+ P S
Sbjct: 54271 RADASRGYPGRTYRFYTGDVVYGFGYGLSYSKYSYSILQAPKKIS 54137
Score = 67.5 bits (141), Expect(3) = 2e-032
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +3 / -3
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
G P QL+GF+ +H A ++ VE V PCK S A +G +V+ G+H +MVG++E E+
Sbjct: 53935 GSPIKQLVGFERVHTAAGRSTDVEITVDPCKLMSFANTEGTRVLFLGTHVLMVGDEEHEL 53756
Query: 510 SFMA*SR 530
A* R
Sbjct: 53755 LIEA*QR 53735
Score = 40.9 bits (83), Expect(3) = 2e-032
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -3
Query: 216 TCDRLKFPAVVRVQNHGPMDGKHSVLVF 299
+C+ L+FP + V N G MDG H+VL+F
Sbjct: 54043 SCEALQFPVHISVSNDGAMDGSHAVLLF 53960
>gb|AACV01010168.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010168, whole
genome shotgun sequence
Length = 28462
Score = 72.5 bits (152), Expect(3) = 2e-032
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +3 / -1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RAD + GYPGRTYRFY G V+ FGYGLSYSKYS+ P S
Sbjct: 19846 RADASRGYPGRTYRFYTGDVVYGFGYGLSYSKYSYSILQAPKKIS 19712
Score = 67.5 bits (141), Expect(3) = 2e-032
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +3 / -1
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
G P QL+GF+ +H A ++ VE V PCK S A +G +V+ G+H +MVG++E E+
Sbjct: 19510 GSPIKQLVGFERVHTAAGRSTDVEITVDPCKLMSFANTEGTRVLFLGTHVLMVGDEEHEL 19331
Query: 510 SFMA*SR 530
A* R
Sbjct: 19330 LIEA*QR 19310
Score = 40.9 bits (83), Expect(3) = 2e-032
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -1
Query: 216 TCDRLKFPAVVRVQNHGPMDGKHSVLVF 299
+C+ L+FP + V N G MDG H+VL+F
Sbjct: 19618 SCEALQFPVHISVSNDGAMDGSHAVLLF 19535
>dbj|AK120331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058N01, full
insert sequence
Length = 2527
Score = 72.5 bits (152), Expect(3) = 2e-032
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +3 / +2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RAD + GYPGRTYRFY G V+ FGYGLSYSKYS+ P S
Sbjct: 1817 RADASRGYPGRTYRFYTGDVVYGFGYGLSYSKYSYSILQAPKKIS 1951
Score = 67.5 bits (141), Expect(3) = 2e-032
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +3 / +2
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
G P QL+GF+ +H A ++ VE V PCK S A +G +V+ G+H +MVG++E E+
Sbjct: 2153 GSPIKQLVGFERVHTAAGRSTDVEITVDPCKLMSFANTEGTRVLFLGTHVLMVGDEEHEL 2332
Query: 510 SFMA*SR 530
A* R
Sbjct: 2333 LIEA*QR 2353
Score = 40.9 bits (83), Expect(3) = 2e-032
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / +2
Query: 216 TCDRLKFPAVVRVQNHGPMDGKHSVLVF 299
+C+ L+FP + V N G MDG H+VL+F
Sbjct: 2045 SCEALQFPVHISVSNDGAMDGSHAVLLF 2128
>ref|XM_473275.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2313
Score = 72.5 bits (152), Expect(3) = 8e-032
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RAD + GYPGRTYRFY G V+ FGYGLSYSKYS+ P S
Sbjct: 1783 RADASRGYPGRTYRFYTGDVVYGFGYGLSYSKYSYSILQAPKKIS 1917
Score = 65.2 bits (136), Expect(3) = 8e-032
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +3 / +1
Query: 330 GRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEM 509
G P QL+GF+ +H A ++ VE V PCK S A +G +V+ G+H +MVG++E E+
Sbjct: 2119 GSPIKQLVGFERVHTAAGRSTDVEITVDPCKLMSFANTEGTRVLFLGTHVLMVGDEEHEL 2298
Query: 510 SFMA* 524
A*
Sbjct: 2299 LIEA* 2313
Score = 40.9 bits (83), Expect(3) = 8e-032
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / +1
Query: 216 TCDRLKFPAVVRVQNHGPMDGKHSVLVF 299
+C+ L+FP + V N G MDG H+VL+F
Sbjct: 2011 SCEALQFPVHISVSNDGAMDGSHAVLLF 2094
>gb|C98929.1|C98929 C98929 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3260_2Z, mRNA sequence
Length = 442
Score = 122 bits (262), Expect(2) = 9e-029
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +3 / +3
Query: 351 IGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEMSFMA*S 527
IGFQSLHL++ QT HVEFEVSPCKHFSRATEDG+KVID GSHF+MVG+DEFEMSF *S
Sbjct: 90 IGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEMSFTP*S 266
Score = 113 bits (242), Expect = 1e-023
Identities = 47/59 (79%), Positives = 50/59 (84%)
Frame = -2 / -1
Query: 526 DHAMKLISNSSSPTITKCEP*SITFLPSSVARLKCLQGLTSNSTCAVCVALRCRLWNPI 350
D +KLISNSSSPTI KC+P*SITFLPSSVA LKCL GLTSNST VC+ LRCRLW PI
Sbjct: 265 DQGVKLISNSSSPTIMKCDP*SITFLPSSVALLKCLHGLTSNSTWTVCIDLRCRLWKPI 89
Score = 27.6 bits (54), Expect(2) = 9e-029
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3 / +1
Query: 297 FMRWPNATDGSGRPAS 344
F+RWPN G+P S
Sbjct: 34 FLRWPNGAPDGGKPXS 81
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
OSJNBa0004D06, complete sequence
Length = 157547
Score = 73.0 bits (153), Expect(3) = 3e-026
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +3 / -2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKP 125
RA+PA GYPGRTYRFY GPT+ FG+GLSY+ ++H A P
Sbjct: 42565 RANPAKGYPGRTYRFYTGPTIHPFGHGLSYTSFTHSIAHAP 42443
Score = 50.6 bits (104), Expect(3) = 3e-026
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +3 / -2
Query: 315 ATDGSGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGE 494
A G G P QL+ F+ +H+ A TA VE + C S A +G + I G H +++GE
Sbjct: 42217 AAAGHGAPVRQLVAFEKVHVGAGGTARVEMGIDVCDGLSVADRNGVRRIPVGEHRLIIGE 42038
Score = 35.9 bits (72), Expect(3) = 3e-026
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3 / -2
Query: 219 CDRLKFPAVVRVQNHGPMDGKHSVLVFMRWP 311
C+ L+ P V V+N G DG H+VLV+ P
Sbjct: 42328 CEELRMPVHVDVRNVGERDGAHTVLVYAAAP 42236
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,463,758,593
Number of Sequences: 438736
Number of extensions: 36417455
Number of successful extensions: 421984
Number of sequences better than 1.0e-020: 58
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 110779247274
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)