TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440444.2.1
(237 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK109882.1| Oryza sativa (japonica cultivar-group) cDNA... 154 2e-036
ref|NT_107119.1| Oryza sativa (japonica cultivar-group) 154 2e-036
gb|AACV01022886.1| Oryza sativa (japonica cultivar-group) c... 154 2e-036
gb|CH401263.1| Oryza sativa (japonica cultivar-group) chrom... 154 2e-036
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 154 2e-036
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 154 2e-036
gb|AC135599.3| Oryza sativa (japonica cultivar-group) chrom... 154 2e-036
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 154 2e-036
dbj|AK070171.1| Oryza sativa (japonica cultivar-group) cDNA... 132 7e-030
gb|AACV01022882.1| Oryza sativa (japonica cultivar-group) c... 132 7e-030
ref|NT_107118.1| Oryza sativa (japonica cultivar-group) 125 6e-028
gb|AACV01022860.1| Oryza sativa (japonica cultivar-group) c... 125 6e-028
gb|AC135596.4| Oryza sativa (japonica cultivar-group) chrom... 125 6e-028
gb|AU075385.1|AU075385 AU075385 Rice panicle at flowering s... 100 8e-024
gb|CB671636.1|CB671636 OSJNEe05E21.r OSJNEe Oryza sativa (j... 100 1e-023
gb|CB643268.1|CB643268 OSJNEb03N19.r OSJNEb Oryza sativa (j... 100 1e-023
gb|CB643271.1|CB643271 OSJNEb03N21.r OSJNEb Oryza sativa (j... 100 1e-023
dbj|AK119887.1| Oryza sativa (japonica cultivar-group) cDNA... 100 3e-023
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 100 4e-023
dbj|AP004774.3| Oryza sativa (japonica cultivar-group) geno... 100 4e-023
dbj|AP004119.3| Oryza sativa (japonica cultivar-group) geno... 100 4e-023
gb|AACV01005431.1| Oryza sativa (japonica cultivar-group) c... 100 4e-023
ref|XM_467832.1| Oryza sativa (japonica cultivar-group), mRNA 100 4e-023
gb|CB645318.1|CB645318 OSJNEb06O17.f OSJNEb Oryza sativa (j... 87 6e-021
gb|CB649907.1|CB649907 OSJNEb14B16.r OSJNEb Oryza sativa (j... 87 6e-021
gb|CB649953.1|CB649953 OSJNEb14C16.r OSJNEb Oryza sativa (j... 87 6e-021
gb|CB642595.1|CB642595 OSJNEb02N16.f OSJNEb Oryza sativa (j... 87 6e-021
gb|CB655149.1|CB655149 OSJNEc08E11.r OSJNEc Oryza sativa (j... 87 7e-021
gb|CB669908.1|CB669908 OSJNEe02L13.r OSJNEe Oryza sativa (j... 87 7e-021
>dbj|AK109882.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D05, full
insert sequence
Length = 2714
Score = 154 bits (330), Expect = 2e-036
Identities = 60/78 (76%), Positives = 67/78 (85%)
Frame = -3 / +1
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWPN K GRP +QLIGFRSQHLK GE A +RFDISPC+HFSRVR DG+KVID
Sbjct: 2164 KHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVID 2343
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSH+ MVD E+EIRFE
Sbjct: 2344 RGSHYLMVDKDELEIRFE 2397
Score = 134 bits (287), Expect = 2e-030
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3 / -1
Query: 3 SNLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLA 182
SNLIS S LSTM+ *DP+SITFLPS LTL KC HGLMSNL LA SP LRCWLL PISW+
Sbjct: 2396 SNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWLLKPISWVV 2217
Query: 183 GRPCFVFGQRRNMSTEC 233
GRP FG RR MSTEC
Sbjct: 2216 GRPPLAFGHRRYMSTEC 2166
Score = 112 bits (239), Expect = 6e-024
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +2 / -3
Query: 2 LKPNLHLMVVNHEEMRPNIDHLPAIRPHPGEMLTRADVKPELSRLPCLEMLAPEPNQLAC 181
L+ NL L++VNHE +RP++DHL A+ P+P E+LT ADVKP++ LP LEMLAPE +QL C
Sbjct: 2397 LESNL*LILVNHEVVRPSVDHLLAVFPYPAEVLTWADVKPDVGLLPYLEMLAPETDQLGC 2218
Query: 182 RATLFRVWPAEEHEHRVL 235
RA + P E HEHRVL
Sbjct: 2217 RAAALSIRPPEVHEHRVL 2164
>ref|NT_107119.1| Oryza sativa (japonica cultivar-group)
Length = 938023
Score = 154 bits (330), Expect = 2e-036
Identities = 60/78 (76%), Positives = 67/78 (85%)
Frame = -3 / +2
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWPN K GRP +QLIGFRSQHLK GE A +RFDISPC+HFSRVR DG+KVID
Sbjct: 66416 KHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVID 66595
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSH+ MVD E+EIRFE
Sbjct: 66596 RGSHYLMVDKDELEIRFE 66649
Score = 134 bits (287), Expect = 2e-030
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3 / -2
Query: 3 SNLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLA 182
SNLIS S LSTM+ *DP+SITFLPS LTL KC HGLMSNL LA SP LRCWLL PISW+
Sbjct: 66648 SNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWLLKPISWVV 66469
Query: 183 GRPCFVFGQRRNMSTEC 233
GRP FG RR MSTEC
Sbjct: 66468 GRPPLAFGHRRYMSTEC 66418
Score = 132 bits (282), Expect = 7e-030
Identities = 51/78 (65%), Positives = 61/78 (78%)
Frame = -3 / +3
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KH+VLMF+RW +T GRP QLIGFR+QHLK GE KL+ +ISPC+H SR R DG KVID
Sbjct: 27414 KHTVLMFVRWSSTDGGRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVID 27593
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSHF MV+ E+EIRF+
Sbjct: 27594 RGSHFLMVEEDELEIRFQ 27647
Score = 112 bits (239), Expect = 6e-024
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +2 / -1
Query: 2 LKPNLHLMVVNHEEMRPNIDHLPAIRPHPGEMLTRADVKPELSRLPCLEMLAPEPNQLAC 181
L+ NL L++VNHE +RP++DHL A+ P+P E+LT ADVKP++ LP LEMLAPE +QL C
Sbjct: 66649 LESNL*LILVNHEVVRPSVDHLLAVFPYPAEVLTWADVKPDVGLLPYLEMLAPETDQLGC 66470
Query: 182 RATLFRVWPAEEHEHRVL 235
RA + P E HEHRVL
Sbjct: 66469 RAAALSIRPPEVHEHRVL 66416
Score = 101 bits (216), Expect = 9e-021
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3 / -1
Query: 6 NLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLAG 185
NLIS S STM+K DP+SITF PS L L +C HGL+S + SP LRCW LNPIS L G
Sbjct: 27643 NLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNPISCLTG 27464
Query: 186 RPCFVFGQRRNMSTEC 233
RP V R N+ST C
Sbjct: 27463 RPPSVLDHRTNISTVC 27416
>gb|AACV01022886.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022886, whole
genome shotgun sequence
Length = 32627
Score = 154 bits (330), Expect = 2e-036
Identities = 60/78 (76%), Positives = 67/78 (85%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWPN K GRP +QLIGFRSQHLK GE A +RFDISPC+HFSRVR DG+KVID
Sbjct: 17316 KHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVID 17137
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSH+ MVD E+EIRFE
Sbjct: 17136 RGSHYLMVDKDELEIRFE 17083
Score = 134 bits (287), Expect = 2e-030
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3 / +2
Query: 3 SNLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLA 182
SNLIS S LSTM+ *DP+SITFLPS LTL KC HGLMSNL LA SP LRCWLL PISW+
Sbjct: 17084 SNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWLLKPISWVV 17263
Query: 183 GRPCFVFGQRRNMSTEC 233
GRP FG RR MSTEC
Sbjct: 17264 GRPPLAFGHRRYMSTEC 17314
Score = 112 bits (239), Expect = 6e-024
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +2 / +1
Query: 2 LKPNLHLMVVNHEEMRPNIDHLPAIRPHPGEMLTRADVKPELSRLPCLEMLAPEPNQLAC 181
L+ NL L++VNHE +RP++DHL A+ P+P E+LT ADVKP++ LP LEMLAPE +QL C
Sbjct: 17083 LESNL*LILVNHEVVRPSVDHLLAVFPYPAEVLTWADVKPDVGLLPYLEMLAPETDQLGC 17262
Query: 182 RATLFRVWPAEEHEHRVL 235
RA + P E HEHRVL
Sbjct: 17263 RAAALSIRPPEVHEHRVL 17316
>gb|CH401263.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000100 genomic
scaffold, whole genome shotgun sequence
Length = 6309838
Score = 154 bits (330), Expect = 2e-036
Identities = 60/78 (76%), Positives = 67/78 (85%)
Frame = -3 / +1
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWPN K GRP +QLIGFRSQHLK GE A +RFDISPC+HFSRVR DG+KVID
Sbjct: 2026564 KHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVID 2026743
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSH+ MVD E+EIRFE
Sbjct: 2026744 RGSHYLMVDKDELEIRFE 2026797
Score = 134 bits (287), Expect = 2e-030
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3 / -3
Query: 3 SNLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLA 182
SNLIS S LSTM+ *DP+SITFLPS LTL KC HGLMSNL LA SP LRCWLL PISW+
Sbjct: 2026796 SNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWLLKPISWVV 2026617
Query: 183 GRPCFVFGQRRNMSTEC 233
GRP FG RR MSTEC
Sbjct: 2026616 GRPPLAFGHRRYMSTEC 2026566
Score = 132 bits (282), Expect = 7e-030
Identities = 51/78 (65%), Positives = 61/78 (78%)
Frame = -3 / +3
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KH+VLMF+RW +T GRP QLIGFR+QHLK GE KL+ +ISPC+H SR R DG KVID
Sbjct: 1984932 KHTVLMFVRWSSTDGGRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVID 1985111
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSHF MV+ E+EIRF+
Sbjct: 1985112 RGSHFLMVEEDELEIRFQ 1985165
Score = 125 bits (268), Expect = 6e-028
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = -3 / -2
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWP T GRPA QLIGFRSQH+K GE A + F++SPC+HFS V DG +VID
Sbjct: 1605759 KHSVLMYLRWPTTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVID 1605580
Query: 55 IGSHFFMVDNHEMEIRF 5
G+HF MV + E+E F
Sbjct: 1605579 GGAHFLMVGDEELETSF 1605529
Score = 112 bits (239), Expect = 6e-024
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +2 / -2
Query: 2 LKPNLHLMVVNHEEMRPNIDHLPAIRPHPGEMLTRADVKPELSRLPCLEMLAPEPNQLAC 181
L+ NL L++VNHE +RP++DHL A+ P+P E+LT ADVKP++ LP LEMLAPE +QL C
Sbjct: 2026797 LESNL*LILVNHEVVRPSVDHLLAVFPYPAEVLTWADVKPDVGLLPYLEMLAPETDQLGC 2026618
Query: 182 RATLFRVWPAEEHEHRVL 235
RA + P E HEHRVL
Sbjct: 2026617 RAAALSIRPPEVHEHRVL 2026564
Score = 101 bits (216), Expect = 9e-021
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3 / -1
Query: 6 NLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLAG 185
NLIS S STM+K DP+SITF PS L L +C HGL+S + SP LRCW LNPIS L G
Sbjct: 1985161 NLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNPISCLTG 1984982
Query: 186 RPCFVFGQRRNMSTEC 233
RP V R N+ST C
Sbjct: 1984981 RPPSVLDHRTNISTVC 1984934
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 154 bits (330), Expect = 2e-036
Identities = 60/78 (76%), Positives = 67/78 (85%)
Frame = -3 / +1
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWPN K GRP +QLIGFRSQHLK GE A +RFDISPC+HFSRVR DG+KVID
Sbjct: 9881608 KHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVID 9881787
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSH+ MVD E+EIRFE
Sbjct: 9881788 RGSHYLMVDKDELEIRFE 9881841
Score = 134 bits (287), Expect = 2e-030
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3 / -2
Query: 3 SNLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLA 182
SNLIS S LSTM+ *DP+SITFLPS LTL KC HGLMSNL LA SP LRCWLL PISW+
Sbjct: 9881840 SNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWLLKPISWVV 9881661
Query: 183 GRPCFVFGQRRNMSTEC 233
GRP FG RR MSTEC
Sbjct: 9881660 GRPPLAFGHRRYMSTEC 9881610
Score = 132 bits (282), Expect = 7e-030
Identities = 51/78 (65%), Positives = 61/78 (78%)
Frame = -3 / +3
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KH+VLMF+RW +T GRP QLIGFR+QHLK GE KL+ +ISPC+H SR R DG KVID
Sbjct: 9839976 KHTVLMFVRWSSTDGGRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVID 9840155
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSHF MV+ E+EIRF+
Sbjct: 9840156 RGSHFLMVEEDELEIRFQ 9840209
Score = 125 bits (268), Expect = 6e-028
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = -3 / -1
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWP T GRPA QLIGFRSQH+K GE A + F++SPC+HFS V DG +VID
Sbjct: 9460803 KHSVLMYLRWPTTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVID 9460624
Query: 55 IGSHFFMVDNHEMEIRF 5
G+HF MV + E+E F
Sbjct: 9460623 GGAHFLMVGDEELETSF 9460573
Score = 112 bits (239), Expect = 6e-024
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +2 / -1
Query: 2 LKPNLHLMVVNHEEMRPNIDHLPAIRPHPGEMLTRADVKPELSRLPCLEMLAPEPNQLAC 181
L+ NL L++VNHE +RP++DHL A+ P+P E+LT ADVKP++ LP LEMLAPE +QL C
Sbjct: 9881841 LESNL*LILVNHEVVRPSVDHLLAVFPYPAEVLTWADVKPDVGLLPYLEMLAPETDQLGC 9881662
Query: 182 RATLFRVWPAEEHEHRVL 235
RA + P E HEHRVL
Sbjct: 9881661 RAAALSIRPPEVHEHRVL 9881608
Score = 101 bits (216), Expect = 9e-021
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3 / -3
Query: 6 NLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLAG 185
NLIS S STM+K DP+SITF PS L L +C HGL+S + SP LRCW LNPIS L G
Sbjct: 9840205 NLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNPISCLTG 9840026
Query: 186 RPCFVFGQRRNMSTEC 233
RP V R N+ST C
Sbjct: 9840025 RPPSVLDHRTNISTVC 9839978
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 154 bits (330), Expect = 2e-036
Identities = 60/78 (76%), Positives = 67/78 (85%)
Frame = -3 / +3
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWPN K GRP +QLIGFRSQHLK GE A +RFDISPC+HFSRVR DG+KVID
Sbjct: 10876896 KHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVID 10877075
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSH+ MVD E+EIRFE
Sbjct: 10877076 RGSHYLMVDKDELEIRFE 10877129
Score = 134 bits (287), Expect = 2e-030
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3 / -3
Query: 3 SNLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLA 182
SNLIS S LSTM+ *DP+SITFLPS LTL KC HGLMSNL LA SP LRCWLL PISW+
Sbjct: 10877128 SNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWLLKPISWVV 10876949
Query: 183 GRPCFVFGQRRNMSTEC 233
GRP FG RR MSTEC
Sbjct: 10876948 GRPPLAFGHRRYMSTEC 10876898
Score = 132 bits (282), Expect = 7e-030
Identities = 51/78 (65%), Positives = 61/78 (78%)
Frame = -3 / +1
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KH+VLMF+RW +T GRP QLIGFR+QHLK GE KL+ +ISPC+H SR R DG KVID
Sbjct: 10837894 KHTVLMFVRWSSTDGGRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVID 10838073
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSHF MV+ E+EIRF+
Sbjct: 10838074 RGSHFLMVEEDELEIRFQ 10838127
Score = 125 bits (268), Expect = 6e-028
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWP T GRPA QLIGFRSQH+K GE A + F++SPC+HFS V DG +VID
Sbjct: 10474858 KHSVLMYLRWPTTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVID 10474679
Query: 55 IGSHFFMVDNHEMEIRF 5
G+HF MV + E+E F
Sbjct: 10474678 GGAHFLMVGDEELETSF 10474628
Score = 112 bits (239), Expect = 6e-024
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +2 / -2
Query: 2 LKPNLHLMVVNHEEMRPNIDHLPAIRPHPGEMLTRADVKPELSRLPCLEMLAPEPNQLAC 181
L+ NL L++VNHE +RP++DHL A+ P+P E+LT ADVKP++ LP LEMLAPE +QL C
Sbjct: 10877129 LESNL*LILVNHEVVRPSVDHLLAVFPYPAEVLTWADVKPDVGLLPYLEMLAPETDQLGC 10876950
Query: 182 RATLFRVWPAEEHEHRVL 235
RA + P E HEHRVL
Sbjct: 10876949 RAAALSIRPPEVHEHRVL 10876896
Score = 101 bits (216), Expect = 9e-021
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3 / -2
Query: 6 NLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLAG 185
NLIS S STM+K DP+SITF PS L L +C HGL+S + SP LRCW LNPIS L G
Sbjct: 10838123 NLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNPISCLTG 10837944
Query: 186 RPCFVFGQRRNMSTEC 233
RP V R N+ST C
Sbjct: 10837943 RPPSVLDHRTNISTVC 10837896
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0045P14, complete sequence
Length = 121894
Score = 154 bits (330), Expect = 2e-036
Identities = 60/78 (76%), Positives = 67/78 (85%)
Frame = -3 / +2
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWPN K GRP +QLIGFRSQHLK GE A +RFDISPC+HFSRVR DG+KVID
Sbjct: 66416 KHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVID 66595
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSH+ MVD E+EIRFE
Sbjct: 66596 RGSHYLMVDKDELEIRFE 66649
Score = 134 bits (287), Expect = 2e-030
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3 / -2
Query: 3 SNLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLA 182
SNLIS S LSTM+ *DP+SITFLPS LTL KC HGLMSNL LA SP LRCWLL PISW+
Sbjct: 66648 SNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWLLKPISWVV 66469
Query: 183 GRPCFVFGQRRNMSTEC 233
GRP FG RR MSTEC
Sbjct: 66468 GRPPLAFGHRRYMSTEC 66418
Score = 132 bits (282), Expect = 7e-030
Identities = 51/78 (65%), Positives = 61/78 (78%)
Frame = -3 / +3
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KH+VLMF+RW +T GRP QLIGFR+QHLK GE KL+ +ISPC+H SR R DG KVID
Sbjct: 27414 KHTVLMFVRWSSTDGGRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVID 27593
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSHF MV+ E+EIRF+
Sbjct: 27594 RGSHFLMVEEDELEIRFQ 27647
Score = 112 bits (239), Expect = 6e-024
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +2 / -1
Query: 2 LKPNLHLMVVNHEEMRPNIDHLPAIRPHPGEMLTRADVKPELSRLPCLEMLAPEPNQLAC 181
L+ NL L++VNHE +RP++DHL A+ P+P E+LT ADVKP++ LP LEMLAPE +QL C
Sbjct: 66649 LESNL*LILVNHEVVRPSVDHLLAVFPYPAEVLTWADVKPDVGLLPYLEMLAPETDQLGC 66470
Query: 182 RATLFRVWPAEEHEHRVL 235
RA + P E HEHRVL
Sbjct: 66469 RAAALSIRPPEVHEHRVL 66416
Score = 101 bits (216), Expect = 9e-021
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3 / -1
Query: 6 NLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLAG 185
NLIS S STM+K DP+SITF PS L L +C HGL+S + SP LRCW LNPIS L G
Sbjct: 27643 NLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNPISCLTG 27464
Query: 186 RPCFVFGQRRNMSTEC 233
RP V R N+ST C
Sbjct: 27463 RPPSVLDHRTNISTVC 27416
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 154 bits (330), Expect = 2e-036
Identities = 60/78 (76%), Positives = 67/78 (85%)
Frame = -3 / +1
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWPN K GRP +QLIGFRSQHLK GE A +RFDISPC+HFSRVR DG+KVID
Sbjct: 10956085 KHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVID 10956264
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSH+ MVD E+EIRFE
Sbjct: 10956265 RGSHYLMVDKDELEIRFE 10956318
Score = 134 bits (287), Expect = 2e-030
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3 / -1
Query: 3 SNLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLA 182
SNLIS S LSTM+ *DP+SITFLPS LTL KC HGLMSNL LA SP LRCWLL PISW+
Sbjct: 10956317 SNLISNSSLSTMR**DPLSITFLPSFLTLLKCSHGLMSNLMLAFSPTLRCWLLKPISWVV 10956138
Query: 183 GRPCFVFGQRRNMSTEC 233
GRP FG RR MSTEC
Sbjct: 10956137 GRPPLAFGHRRYMSTEC 10956087
Score = 132 bits (282), Expect = 7e-030
Identities = 51/78 (65%), Positives = 61/78 (78%)
Frame = -3 / +2
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KH+VLMF+RW +T GRP QLIGFR+QHLK GE KL+ +ISPC+H SR R DG KVID
Sbjct: 10917083 KHTVLMFVRWSSTDGGRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVID 10917262
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSHF MV+ E+EIRF+
Sbjct: 10917263 RGSHFLMVEEDELEIRFQ 10917316
Score = 125 bits (268), Expect = 6e-028
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = -3 / -2
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWP T GRPA QLIGFRSQH+K GE A + F++SPC+HFS V DG +VID
Sbjct: 10546402 KHSVLMYLRWPTTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVID 10546223
Query: 55 IGSHFFMVDNHEMEIRF 5
G+HF MV + E+E F
Sbjct: 10546222 GGAHFLMVGDEELETSF 10546172
Score = 112 bits (239), Expect = 6e-024
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +2 / -3
Query: 2 LKPNLHLMVVNHEEMRPNIDHLPAIRPHPGEMLTRADVKPELSRLPCLEMLAPEPNQLAC 181
L+ NL L++VNHE +RP++DHL A+ P+P E+LT ADVKP++ LP LEMLAPE +QL C
Sbjct: 10956318 LESNL*LILVNHEVVRPSVDHLLAVFPYPAEVLTWADVKPDVGLLPYLEMLAPETDQLGC 10956139
Query: 182 RATLFRVWPAEEHEHRVL 235
RA + P E HEHRVL
Sbjct: 10956138 RAAALSIRPPEVHEHRVL 10956085
Score = 101 bits (216), Expect = 9e-021
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3 / -3
Query: 6 NLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLAG 185
NLIS S STM+K DP+SITF PS L L +C HGL+S + SP LRCW LNPIS L G
Sbjct: 10917312 NLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNPISCLTG 10917133
Query: 186 RPCFVFGQRRNMSTEC 233
RP V R N+ST C
Sbjct: 10917132 RPPSVLDHRTNISTVC 10917085
>dbj|AK070171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O20, full
insert sequence
Length = 2515
Score = 132 bits (282), Expect = 7e-030
Identities = 51/78 (65%), Positives = 61/78 (78%)
Frame = -3 / +2
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KH+VLMF+RW +T GRP QLIGFR+QHLK GE KL+ +ISPC+H SR R DG KVID
Sbjct: 2147 KHTVLMFVRWSSTDGGRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVID 2326
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSHF MV+ E+EIRF+
Sbjct: 2327 RGSHFLMVEEDELEIRFQ 2380
Score = 103 bits (219), Expect = 4e-021
Identities = 46/76 (60%), Positives = 51/76 (67%)
Frame = +3 / -2
Query: 6 NLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLAG 185
NLIS S STM+K DP+SITF PS L L KC HGL+S + SP LRCW LNPIS L G
Sbjct: 2376 NLISNSSSSTMRKCDPLSITFSPSTLALLKCSHGLISIFNFFFSPTLRCWFLNPISCLTG 2197
Query: 186 RPCFVFGQRRNMSTEC 233
RP V R N+ST C
Sbjct: 2196 RPPSVLDHRTNISTVC 2149
>gb|AACV01022882.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022882, whole
genome shotgun sequence
Length = 28515
Score = 132 bits (282), Expect = 7e-030
Identities = 51/78 (65%), Positives = 61/78 (78%)
Frame = -3 / -1
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KH+VLMF+RW +T GRP QLIGFR+QHLK GE KL+ +ISPC+H SR R DG KVID
Sbjct: 22182 KHTVLMFVRWSSTDGGRPVRQLIGFRNQHLKVGEKKKLKMEISPCEHLSRARVDGEKVID 22003
Query: 55 IGSHFFMVDNHEMEIRFE 2
GSHF MV+ E+EIRF+
Sbjct: 22002 RGSHFLMVEEDELEIRFQ 21949
Score = 101 bits (216), Expect = 9e-021
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3 / +2
Query: 6 NLISISWLSTMKK*DPISITFLPSALTLEKCLHGLMSNLSLAVSPALRCWLLNPISWLAG 185
NLIS S STM+K DP+SITF PS L L +C HGL+S + SP LRCW LNPIS L G
Sbjct: 21953 NLISNSSSSTMRKCDPLSITFSPSTLALLRCSHGLISIFNFFFSPTLRCWFLNPISCLTG 22132
Query: 186 RPCFVFGQRRNMSTEC 233
RP V R N+ST C
Sbjct: 22133 RPPSVLDHRTNISTVC 22180
>ref|NT_107118.1| Oryza sativa (japonica cultivar-group)
Length = 339677
Score = 125 bits (268), Expect = 6e-028
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = -3 / -2
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWP T GRPA QLIGFRSQH+K GE A + F++SPC+HFS V DG +VID
Sbjct: 98704 KHSVLMYLRWPTTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVID 98525
Query: 55 IGSHFFMVDNHEMEIRF 5
G+HF MV + E+E F
Sbjct: 98524 GGAHFLMVGDEELETSF 98474
>gb|AACV01022860.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022860, whole
genome shotgun sequence
Length = 86978
Score = 125 bits (268), Expect = 6e-028
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = -3 / -1
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWP T GRPA QLIGFRSQH+K GE A + F++SPC+HFS V DG +VID
Sbjct: 53960 KHSVLMYLRWPTTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVID 53781
Query: 55 IGSHFFMVDNHEMEIRF 5
G+HF MV + E+E F
Sbjct: 53780 GGAHFLMVGDEELETSF 53730
>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0032D10 map E20933S, complete sequence
Length = 146118
Score = 125 bits (268), Expect = 6e-028
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPNTKQGRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVID 56
KHSVLM+LRWP T GRPA QLIGFRSQH+K GE A + F++SPC+HFS V DG +VID
Sbjct: 98704 KHSVLMYLRWPTTSGGRPARQLIGFRSQHVKVGEKAMVSFEVSPCEHFSWVGEDGERVID 98525
Query: 55 IGSHFFMVDNHEMEIRF 5
G+HF MV + E+E F
Sbjct: 98524 GGAHFLMVGDEELETSF 98474
>gb|AU075385.1|AU075385 AU075385 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2937_4Z, mRNA sequence
Length = 485
Score = 99.6 bits (211), Expect(2) = 8e-024
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / +3
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 78 GRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 257
Query: 10 RF 5
F
Sbjct: 258 SF 263
Score = 29.5 bits (58), Expect(2) = 8e-024
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +3
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 27 RHPVLLFLRWPN 62
>gb|CB671636.1|CB671636 OSJNEe05E21.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05E21 3', mRNA sequence
Length = 726
Score = 99.6 bits (211), Expect(2) = 1e-023
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / -2
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 407 GRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 228
Query: 10 RF 5
F
Sbjct: 227 SF 222
Score = 29.5 bits (58), Expect(2) = 1e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / -2
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 458 RHPVLLFLRWPN 423
>gb|CB643268.1|CB643268 OSJNEb03N19.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03N19 3', mRNA sequence
Length = 741
Score = 99.6 bits (211), Expect(2) = 1e-023
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / -3
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 424 GRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 245
Query: 10 RF 5
F
Sbjct: 244 SF 239
Score = 29.5 bits (58), Expect(2) = 1e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 475 RHPVLLFLRWPN 440
>gb|CB643271.1|CB643271 OSJNEb03N21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03N21 3', mRNA sequence
Length = 858
Score = 99.6 bits (211), Expect(2) = 1e-023
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / -1
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 480 GRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 301
Query: 10 RF 5
F
Sbjct: 300 SF 295
Score = 29.5 bits (58), Expect(2) = 1e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / -1
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 531 RHPVLLFLRWPN 496
>dbj|AK119887.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-H05, full
insert sequence
Length = 2628
Score = 100 bits (212), Expect(2) = 3e-023
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / +3
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 2193 GRPASQLIGFQSLHLKSMQTVHMEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 2372
Query: 10 RF 5
F
Sbjct: 2373 SF 2378
Score = 29.5 bits (58), Expect(2) = 3e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +3
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 2142 RHPVLLFLRWPN 2177
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 99.6 bits (211), Expect(2) = 4e-023
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / -3
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 6793728 GRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 6793549
Query: 10 RF 5
F
Sbjct: 6793548 SF 6793543
Score = 29.5 bits (58), Expect(2) = 4e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 6793779 RHPVLLFLRWPN 6793744
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0431B06
Length = 154796
Score = 99.6 bits (211), Expect(2) = 4e-023
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / -3
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 119289 GRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 119110
Query: 10 RF 5
F
Sbjct: 119109 SF 119104
Score = 29.5 bits (58), Expect(2) = 4e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 119340 RHPVLLFLRWPN 119305
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1288_G09
Length = 109672
Score = 99.6 bits (211), Expect(2) = 4e-023
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / -3
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 8516 GRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 8337
Query: 10 RF 5
F
Sbjct: 8336 SF 8331
Score = 29.5 bits (58), Expect(2) = 4e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 8567 RHPVLLFLRWPN 8532
>gb|AACV01005431.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005431, whole
genome shotgun sequence
Length = 31287
Score = 99.6 bits (211), Expect(2) = 4e-023
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / -3
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 9106 GRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 8927
Query: 10 RF 5
F
Sbjct: 8926 SF 8921
Score = 29.5 bits (58), Expect(2) = 4e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 9157 RHPVLLFLRWPN 9122
>ref|XM_467832.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2628
Score = 99.6 bits (211), Expect(2) = 4e-023
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -3 / +3
Query: 190 GRPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEMEI 11
GRPASQLIGF+S HLK+ +T + F++SPCKHFSR DG+KVID GSHF MV + E E+
Sbjct: 2193 GRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEM 2372
Query: 10 RF 5
F
Sbjct: 2373 SF 2378
Score = 29.5 bits (58), Expect(2) = 4e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +3
Query: 235 KHSVLMFLRWPN 200
+H VL+FLRWPN
Sbjct: 2142 RHPVLLFLRWPN 2177
>gb|CB645318.1|CB645318 OSJNEb06O17.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06O17 5', mRNA sequence
Length = 720
Score = 86.8 bits (183), Expect(2) = 6e-021
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3 / -1
Query: 187 RPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEME 14
RPA QL+GF SQH++AGE A+L +I+PC+H SR R DG KVID GSHF V + E
Sbjct: 429 RPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKVGEEDDE 256
Score = 33.1 bits (66), Expect(2) = 6e-021
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 235 KHSVLMFLRWPNTKQG 188
KHSVL+F+RWPN G
Sbjct: 483 KHSVLVFVRWPNATAG 436
>gb|CB649907.1|CB649907 OSJNEb14B16.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14B16 3', mRNA sequence
Length = 736
Score = 86.8 bits (183), Expect(2) = 6e-021
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3 / -3
Query: 187 RPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEME 14
RPA QL+GF SQH++AGE A+L +I+PC+H SR R DG KVID GSHF V + E
Sbjct: 551 RPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKVGEEDDE 378
Score = 33.1 bits (66), Expect(2) = 6e-021
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPNTKQG 188
KHSVL+F+RWPN G
Sbjct: 605 KHSVLVFVRWPNATAG 558
>gb|CB649953.1|CB649953 OSJNEb14C16.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14C16 3', mRNA sequence
Length = 739
Score = 86.8 bits (183), Expect(2) = 6e-021
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3 / -1
Query: 187 RPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEME 14
RPA QL+GF SQH++AGE A+L +I+PC+H SR R DG KVID GSHF V + E
Sbjct: 550 RPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKVGEEDDE 377
Score = 33.1 bits (66), Expect(2) = 6e-021
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 235 KHSVLMFLRWPNTKQG 188
KHSVL+F+RWPN G
Sbjct: 604 KHSVLVFVRWPNATAG 557
>gb|CB642595.1|CB642595 OSJNEb02N16.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb02N16 5', mRNA sequence
Length = 742
Score = 86.8 bits (183), Expect(2) = 6e-021
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3 / -1
Query: 187 RPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEME 14
RPA QL+GF SQH++AGE A+L +I+PC+H SR R DG KVID GSHF V + E
Sbjct: 331 RPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKVGEEDDE 158
Score = 33.1 bits (66), Expect(2) = 6e-021
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 235 KHSVLMFLRWPNTKQG 188
KHSVL+F+RWPN G
Sbjct: 385 KHSVLVFVRWPNATAG 338
>gb|CB655149.1|CB655149 OSJNEc08E11.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08E11 3', mRNA sequence
Length = 765
Score = 86.8 bits (183), Expect(2) = 7e-021
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3 / -3
Query: 187 RPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEME 14
RPA QL+GF SQH++AGE A+L +I+PC+H SR R DG KVID GSHF V + E
Sbjct: 475 RPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKVGEEDDE 302
Score = 33.1 bits (66), Expect(2) = 7e-021
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 235 KHSVLMFLRWPNTKQG 188
KHSVL+F+RWPN G
Sbjct: 529 KHSVLVFVRWPNATAG 482
>gb|CB669908.1|CB669908 OSJNEe02L13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02L13 3', mRNA sequence
Length = 792
Score = 86.8 bits (183), Expect(2) = 7e-021
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3 / -1
Query: 187 RPASQLIGFRSQHLKAGETAKLRFDISPCKHFSRVRADGRKVIDIGSHFFMVDNHEME 14
RPA QL+GF SQH++AGE A+L +I+PC+H SR R DG KVID GSHF V + E
Sbjct: 381 RPARQLVGFSSQHVRAGEKARLTMEINPCEHLSRAREDGTKVIDRGSHFLKVGEEDDE 208
Score = 33.1 bits (66), Expect(2) = 7e-021
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 235 KHSVLMFLRWPNTKQG 188
KHSVL+F+RWPN G
Sbjct: 435 KHSVLVFVRWPNATAG 388
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,868,033,374
Number of Sequences: 438736
Number of extensions: 26839351
Number of successful extensions: 386073
Number of sequences better than 1.0e-020: 34
length of database: 933,473,305
effective HSP length: 54
effective length of database: 909,781,561
effective search space used: 21834757464
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)