TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437629.2.2
(1041 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK061366.1| Oryza sativa (japonica cultivar-group) cDNA... 149 2e-048
gb|CB685153.1|CB685153 OSJNEf15F10.f OSJNEf Oryza sativa (j... 149 3e-048
ref|NM_190765.1| Oryza sativa (japonica cultivar-group), p... 149 3e-048
gb|CB679715.1|CB679715 OSJNEf03J03.f OSJNEf Oryza sativa (j... 149 3e-048
dbj|AK121441.1| Oryza sativa (japonica cultivar-group) cDNA... 149 5e-048
gb|AACV01002753.1| Oryza sativa (japonica cultivar-group) c... 100 1e-042
ref|XM_475304.1| Oryza sativa (japonica cultivar-group), p... 141 1e-040
gb|CB653924.1|CB653924 OSJNEc05G06.r OSJNEc Oryza sativa (j... 141 1e-040
dbj|AK059283.1| Oryza sativa (japonica cultivar-group) cDNA... 141 2e-040
dbj|AK121867.1| Oryza sativa (japonica cultivar-group) cDNA... 141 3e-040
dbj|AP003286.3| Oryza sativa (japonica cultivar-group) geno... 100 6e-040
gb|CA999153.1|CA999153 S234N_C11 Rice cold stress germinati... 141 6e-040
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 100 3e-036
gb|AACV01012264.1| Oryza sativa (japonica cultivar-group) c... 100 2e-034
gb|AC105318.4| Oryza sativa (japonica cultivar-group) chrom... 100 3e-033
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 100 2e-030
dbj|AK059220.1| Oryza sativa (japonica cultivar-group) cDNA... 122 3e-030
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 100 3e-029
dbj|AK071119.1| Oryza sativa (japonica cultivar-group) cDNA... 120 1e-028
gb|AU030028.1|AU030028 AU030028 Rice cDNA from immature lea... 118 5e-028
gb|C99208.1|C99208 C99208 Rice panicle at ripening stage Or... 70 7e-028
gb|AU030027.1|AU030027 AU030027 Rice cDNA from immature lea... 120 3e-025
gb|AU077950.1|AU077950 AU077950 Rice callus Oryza sativa (j... 71 5e-024
gb|AACV01012610.1| Oryza sativa (japonica cultivar-group) c... 78 5e-024
gb|AACV01003836.1| Oryza sativa (japonica cultivar-group) c... 79 5e-023
gb|AC108499.3| Oryza sativa (japonica cultivar-group) chrom... 78 3e-022
dbj|AP005428.2| Oryza sativa (japonica cultivar-group) geno... 79 9e-022
ref|NT_107218.1| Oryza sativa (japonica cultivar-group) 78 2e-021
>dbj|AK061366.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D06, full
insert sequence
Length = 1271
Score = 149 bits (319), Expect(3) = 2e-048
Identities = 62/69 (89%), Positives = 64/69 (92%)
Frame = +1 / +2
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLS
Sbjct: 605 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLS 784
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 785 IREGIEIIV 811
Score = 126 bits (269), Expect(3) = 3e-040
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = -2 / -3
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EFTRN+SPM R*FVGT TLHSSSSPLSV*RTTVDV+NPNAY
Sbjct: 813 ETIISIPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV*RTTVDVINPNAY 634
Query: 32 SPIRG*RIIA 3
SPIRG*RIIA
Sbjct: 633 SPIRG*RIIA 604
Score = 119 bits (255), Expect(2) = 7e-032
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = -1 / -2
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + DSFSN *I S VHQKY+T+V+MICWHI+ QFFVAFVSLK++ *CY+SKCIF
Sbjct: 811 NNYFDSFSNG*IWSYYLLRVHQKYVTNVKMICWHINAAQFFVAFVSLKNNS*CYKSKCIF 632
Query: 30 TNSWMTNY 7
TN+WMTNY
Sbjct: 631 TNTWMTNY 608
Score = 108 bits (231), Expect(2) = 1e-025
Identities = 50/70 (71%), Positives = 53/70 (75%)
Frame = -3 / -1
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEGPPLML*IQM 38
L K +RFLLE IN VL SSPEI H+C DDLLAH TVLRRLCQSE LML*IQM
Sbjct: 818 LQKQLFRFLLEWINLVLLSPQSSPEICHQCKDDLLAHKRCTVLRRLCQSEEQQLML*IQM 639
Query: 37 HIHQFVDDEL 8
HIHQ+VDDEL
Sbjct: 638 HIHQYVDDEL 609
Score = 100 bits (214), Expect(2) = 1e-026
Identities = 47/65 (72%), Positives = 48/65 (73%)
Frame = +2 / +3
Query: 5 Q*FVIHELVNMHLDS*HQRWSFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYL 184
+*FVIH LVNMHLD *HQ FRLTKATKNC MCQQII T V YFW*T *D IY
Sbjct: 606 R*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQIIFTLVTYFW*TLRR**DQIYP 785
Query: 185 FEKES 199
FEKES
Sbjct: 786 FEKES 800
Score = 70.7 bits (148), Expect(3) = 2e-048
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASLEP PRKSQNIRLNR+
Sbjct: 800 EIIVSGGMTMPQVIASLEPTPRKSQNIRLNRI 895
Score = 65.2 bits (136), Expect(3) = 3e-040
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = -3 / -3
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILFRR+FWLF G+GS DAIT G+VIPPETIIS ++
Sbjct: 897 IILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSR 787
Score = 47.3 bits (97), Expect(2) = 1e-026
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 395 RNNCFRRDDHASGDCITGAHATEKPEHSSK*ND 493
RNNCF R+D+A+GD + H E+PE+ SK*N+
Sbjct: 799 RNNCFWRNDYATGDRVP*THPKEEPEYPSK*NN 897
Score = 46.0 bits (94), Expect(2) = 7e-032
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -2 / -2
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI*T++LA PW G + +HL H H S NNYF
Sbjct: 895 YSI*TDILALPWGGFKGRDHLWHSHSSRNNYF 800
Score = 35.9 bits (72), Expect(2) = 1e-025
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = -1 / -1
Query: 489 FYLDECSGFSVAWAPVMQSPEAWSSLLKQLF 397
FYLD SG S+ W +SP A S L KQLF
Sbjct: 893 FYLDGYSGSSLGWVQGTRSPVA*SFLQKQLF 801
Score = 23.1 bits (44), Expect(3) = 3e-040
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / -1
Query: 714 NNIPGHQHDASPALQNAT 661
N IP H++ AS NAT
Sbjct: 1121 NTIPEHRYGASATFCNAT 1068
Score = 22.6 bits (43), Expect(3) = 2e-048
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 916 WSKMLTSMLEV 948
WS+MLTS+++V
Sbjct: 1162 WSEMLTSLVQV 1194
>gb|CB685153.1|CB685153 OSJNEf15F10.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15F10 5', mRNA sequence
Length = 758
Score = 149 bits (319), Expect(2) = 3e-048
Identities = 62/69 (89%), Positives = 64/69 (92%)
Frame = +1 / +2
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLS
Sbjct: 440 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLS 619
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 620 IREGIEIIV 646
Score = 126 bits (269), Expect(2) = 9e-040
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = -2 / -3
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EFTRN+SPM R*FVGT TLHSSSSPLSV*RTTVDV+NPNAY
Sbjct: 648 ETIISIPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV*RTTVDVINPNAY 469
Query: 32 SPIRG*RIIA 3
SPIRG*RIIA
Sbjct: 468 SPIRG*RIIA 439
Score = 119 bits (255), Expect(2) = 2e-030
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = -1 / -2
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + DSFSN *I S VHQKY+T+V+MICWHI+ QFFVAFVSLK++ *CY+SKCIF
Sbjct: 646 NNYFDSFSNG*IWSYYLLRVHQKYVTNVKMICWHINAAQFFVAFVSLKNNS*CYKSKCIF 467
Query: 30 TNSWMTNY 7
TN+WMTNY
Sbjct: 466 TNTWMTNY 443
Score = 108 bits (231), Expect(2) = 3e-025
Identities = 50/70 (71%), Positives = 53/70 (75%)
Frame = -3 / -1
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEGPPLML*IQM 38
L K +RFLLE IN VL SSPEI H+C DDLLAH TVLRRLCQSE LML*IQM
Sbjct: 653 LQKQLFRFLLEWINLVLLSPQSSPEICHQCKDDLLAHKRCTVLRRLCQSEEQQLML*IQM 474
Query: 37 HIHQFVDDEL 8
HIHQ+VDDEL
Sbjct: 473 HIHQYVDDEL 444
Score = 100 bits (214), Expect(2) = 6e-027
Identities = 47/65 (72%), Positives = 48/65 (73%)
Frame = +2 / +3
Query: 5 Q*FVIHELVNMHLDS*HQRWSFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYL 184
+*FVIH LVNMHLD *HQ FRLTKATKNC MCQQII T V YFW*T *D IY
Sbjct: 441 R*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQIIFTLVTYFW*TLRR**DQIYP 620
Query: 185 FEKES 199
FEKES
Sbjct: 621 FEKES 635
Score = 70.7 bits (148), Expect(2) = 3e-048
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASLEP PRKSQNIRLNR+
Sbjct: 635 EIIVSGGMTMPQVIASLEPTPRKSQNIRLNRI 730
Score = 65.2 bits (136), Expect(2) = 9e-040
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = -3 / -3
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILFRR+FWLF G+GS DAIT G+VIPPETIIS ++
Sbjct: 732 IILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSR 622
Score = 47.3 bits (97), Expect(2) = 6e-027
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 395 RNNCFRRDDHASGDCITGAHATEKPEHSSK*ND 493
RNNCF R+D+A+GD + H E+PE+ SK*N+
Sbjct: 634 RNNCFWRNDYATGDRVP*THPQEEPEYPSK*NN 732
Score = 40.0 bits (81), Expect(2) = 2e-030
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -2 / -2
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI*T++LA P G + +HL H H S NNYF
Sbjct: 730 YSI*TDILALPGGGFKGRDHLWHSHSSRNNYF 635
Score = 34.1 bits (68), Expect(2) = 3e-025
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -1 / -1
Query: 489 FYLDECSGFSVAWAPVMQSPEAWSSLLKQLF 397
FYLD SG S W +SP A S L KQLF
Sbjct: 728 FYLDGYSGSSWGWVQGTRSPVA*SFLQKQLF 636
>ref|NM_190765.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 780
Score = 149 bits (319), Expect(2) = 3e-048
Identities = 62/69 (89%), Positives = 64/69 (92%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLS
Sbjct: 481 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLS 660
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 661 IREGIEIIV 687
Score = 126 bits (269), Expect(2) = 1e-039
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = -2 / -2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EFTRN+SPM R*FVGT TLHSSSSPLSV*RTTVDV+NPNAY
Sbjct: 689 ETIISIPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV*RTTVDVINPNAY 510
Query: 32 SPIRG*RIIA 3
SPIRG*RIIA
Sbjct: 509 SPIRG*RIIA 480
Score = 119 bits (255), Expect(2) = 4e-032
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = -1 / -1
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + DSFSN *I S VHQKY+T+V+MICWHI+ QFFVAFVSLK++ *CY+SKCIF
Sbjct: 687 NNYFDSFSNG*IWSYYLLRVHQKYVTNVKMICWHINAAQFFVAFVSLKNNS*CYKSKCIF 508
Query: 30 TNSWMTNY 7
TN+WMTNY
Sbjct: 507 TNTWMTNY 484
Score = 108 bits (231), Expect(2) = 8e-026
Identities = 50/70 (71%), Positives = 53/70 (75%)
Frame = -3 / -3
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEGPPLML*IQM 38
L K +RFLLE IN VL SSPEI H+C DDLLAH TVLRRLCQSE LML*IQM
Sbjct: 694 LQKQLFRFLLEWINLVLLSPQSSPEICHQCKDDLLAHKRCTVLRRLCQSEEQQLML*IQM 515
Query: 37 HIHQFVDDEL 8
HIHQ+VDDEL
Sbjct: 514 HIHQYVDDEL 485
Score = 100 bits (214), Expect(2) = 7e-027
Identities = 47/65 (72%), Positives = 48/65 (73%)
Frame = +2 / +2
Query: 5 Q*FVIHELVNMHLDS*HQRWSFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYL 184
+*FVIH LVNMHLD *HQ FRLTKATKNC MCQQII T V YFW*T *D IY
Sbjct: 482 R*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQIIFTLVTYFW*TLRR**DQIYP 661
Query: 185 FEKES 199
FEKES
Sbjct: 662 FEKES 676
Score = 70.7 bits (148), Expect(2) = 3e-048
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3 / +1
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASLEP PRKSQNIRLNR+
Sbjct: 676 EIIVSGGMTMPQVIASLEPTPRKSQNIRLNRI 771
Score = 65.2 bits (136), Expect(2) = 1e-039
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = -3 / -2
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILFRR+FWLF G+GS DAIT G+VIPPETIIS ++
Sbjct: 773 IILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSR 663
Score = 47.3 bits (97), Expect(2) = 7e-027
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2 / +3
Query: 395 RNNCFRRDDHASGDCITGAHATEKPEHSSK*ND 493
RNNCF R+D+A+GD + H E+PE+ SK*N+
Sbjct: 675 RNNCFWRNDYATGDRVP*THPKEEPEYPSK*NN 773
Score = 46.0 bits (94), Expect(2) = 4e-032
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -2 / -1
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI*T++LA PW G + +HL H H S NNYF
Sbjct: 771 YSI*TDILALPWGGFKGRDHLWHSHSSRNNYF 676
Score = 35.9 bits (72), Expect(2) = 8e-026
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = -1 / -3
Query: 489 FYLDECSGFSVAWAPVMQSPEAWSSLLKQLF 397
FYLD SG S+ W +SP A S L KQLF
Sbjct: 769 FYLDGYSGSSLGWVQGTRSPVA*SFLQKQLF 677
>gb|CB679715.1|CB679715 OSJNEf03J03.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03J03 5', mRNA sequence
Length = 807
Score = 149 bits (319), Expect(2) = 3e-048
Identities = 62/69 (89%), Positives = 64/69 (92%)
Frame = +1 / +2
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLS
Sbjct: 446 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLS 625
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 626 IREGIEIIV 652
Score = 126 bits (269), Expect(2) = 1e-039
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = -2 / -1
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EFTRN+SPM R*FVGT TLHSSSSPLSV*RTTVDV+NPNAY
Sbjct: 654 ETIISIPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV*RTTVDVINPNAY 475
Query: 32 SPIRG*RIIA 3
SPIRG*RIIA
Sbjct: 474 SPIRG*RIIA 445
Score = 119 bits (255), Expect(2) = 4e-032
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = -1 / -3
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + DSFSN *I S VHQKY+T+V+MICWHI+ QFFVAFVSLK++ *CY+SKCIF
Sbjct: 652 NNYFDSFSNG*IWSYYLLRVHQKYVTNVKMICWHINAAQFFVAFVSLKNNS*CYKSKCIF 473
Query: 30 TNSWMTNY 7
TN+WMTNY
Sbjct: 472 TNTWMTNY 449
Score = 108 bits (231), Expect(2) = 8e-026
Identities = 50/70 (71%), Positives = 53/70 (75%)
Frame = -3 / -2
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEGPPLML*IQM 38
L K +RFLLE IN VL SSPEI H+C DDLLAH TVLRRLCQSE LML*IQM
Sbjct: 659 LQKQLFRFLLEWINLVLLSPQSSPEICHQCKDDLLAHKRCTVLRRLCQSEEQQLML*IQM 480
Query: 37 HIHQFVDDEL 8
HIHQ+VDDEL
Sbjct: 479 HIHQYVDDEL 450
Score = 100 bits (214), Expect(2) = 7e-027
Identities = 47/65 (72%), Positives = 48/65 (73%)
Frame = +2 / +3
Query: 5 Q*FVIHELVNMHLDS*HQRWSFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYL 184
+*FVIH LVNMHLD *HQ FRLTKATKNC MCQQII T V YFW*T *D IY
Sbjct: 447 R*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQIIFTLVTYFW*TLRR**DQIYP 626
Query: 185 FEKES 199
FEKES
Sbjct: 627 FEKES 641
Score = 70.7 bits (148), Expect(2) = 3e-048
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASLEP PRKSQNIRLNR+
Sbjct: 641 EIIVSGGMTMPQVIASLEPTPRKSQNIRLNRI 736
Score = 65.2 bits (136), Expect(2) = 1e-039
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = -3 / -1
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILFRR+FWLF G+GS DAIT G+VIPPETIIS ++
Sbjct: 738 IILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSR 628
Score = 47.3 bits (97), Expect(2) = 7e-027
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 395 RNNCFRRDDHASGDCITGAHATEKPEHSSK*ND 493
RNNCF R+D+A+GD + H E+PE+ SK*N+
Sbjct: 640 RNNCFWRNDYATGDRVP*THPKEEPEYPSK*NN 738
Score = 46.0 bits (94), Expect(2) = 4e-032
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -2 / -3
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI*T++LA PW G + +HL H H S NNYF
Sbjct: 736 YSI*TDILALPWGGFKGRDHLWHSHSSRNNYF 641
Score = 35.9 bits (72), Expect(2) = 8e-026
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = -1 / -2
Query: 489 FYLDECSGFSVAWAPVMQSPEAWSSLLKQLF 397
FYLD SG S+ W +SP A S L KQLF
Sbjct: 734 FYLDGYSGSSLGWVQGTRSPVA*SFLQKQLF 642
>dbj|AK121441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140N15, full
insert sequence
Length = 2362
Score = 149 bits (319), Expect(3) = 5e-048
Identities = 62/69 (89%), Positives = 64/69 (92%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLS
Sbjct: 1689 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSGEIIRPNLS 1868
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 1869 IREGIEIIV 1895
Score = 125 bits (267), Expect(3) = 2e-039
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = -2 / -1
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EFTRN+SPM R*FVGT TLHSSSSPLSV*RTTVDV+NPNAY
Sbjct: 1897 ETIISIPSRMDKFGLIISPEFTRNMSPM*R*FVGT*TLHSSSSPLSV*RTTVDVINPNAY 1718
Query: 32 SPIRG*RIIA 3
SPIRG*RIIA
Sbjct: 1717 SPIRG*RIIA 1688
Score = 119 bits (254), Expect(2) = 2e-031
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = -1 / -3
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + DSFSN *I S VHQKY+T+V+MICWHI+ QFFVAFVSLK++ *CY+SKCIF
Sbjct: 1895 NNYFDSFSNG*IWSYYLPRVHQKYVTNVKMICWHINAAQFFVAFVSLKNNS*CYKSKCIF 1716
Query: 30 TNSWMTNY 7
TN+WMTNY
Sbjct: 1715 TNTWMTNY 1692
Score = 108 bits (231), Expect(2) = 3e-025
Identities = 50/70 (71%), Positives = 53/70 (75%)
Frame = -3 / -2
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEGPPLML*IQM 38
L K +RFLLE IN VL SSPEI H+C DDLLAH TVLRRLCQSE LML*IQM
Sbjct: 1902 LQKQLFRFLLEWINLVLLSPQSSPEICHQCKDDLLAHKRCTVLRRLCQSEEQQLML*IQM 1723
Query: 37 HIHQFVDDEL 8
HIHQ+VDDEL
Sbjct: 1722 HIHQYVDDEL 1693
Score = 100 bits (214), Expect(2) = 2e-026
Identities = 47/65 (72%), Positives = 48/65 (73%)
Frame = +2 / +1
Query: 5 Q*FVIHELVNMHLDS*HQRWSFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYL 184
+*FVIH LVNMHLD *HQ FRLTKATKNC MCQQII T V YFW*T *D IY
Sbjct: 1690 R*FVIHVLVNMHLDL*HQLLFFRLTKATKNCAAFMCQQIIFTLVTYFW*TLGR**DQIYP 1869
Query: 185 FEKES 199
FEKES
Sbjct: 1870 FEKES 1884
Score = 70.7 bits (148), Expect(3) = 5e-048
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASLEP PRKSQNIRLNR+
Sbjct: 1884 EIIVSGGMTMPQVIASLEPTPRKSQNIRLNRI 1979
Score = 65.2 bits (136), Expect(3) = 2e-039
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = -3 / -1
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILFRR+FWLF G+GS DAIT G+VIPPETIIS ++
Sbjct: 1981 IILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSR 1871
Score = 47.3 bits (97), Expect(2) = 2e-026
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2 / +2
Query: 395 RNNCFRRDDHASGDCITGAHATEKPEHSSK*ND 493
RNNCF R+D+A+GD + H E+PE+ SK*N+
Sbjct: 1883 RNNCFWRNDYATGDRVP*THPKEEPEYPSK*NN 1981
Score = 46.0 bits (94), Expect(2) = 2e-031
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -2 / -3
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI*T++LA PW G + +HL H H S NNYF
Sbjct: 1979 YSI*TDILALPWGGFKGRDHLWHSHSSRNNYF 1884
Score = 35.9 bits (72), Expect(2) = 3e-025
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = -1 / -2
Query: 489 FYLDECSGFSVAWAPVMQSPEAWSSLLKQLF 397
FYLD SG S+ W +SP A S L KQLF
Sbjct: 1977 FYLDGYSGSSLGWVQGTRSPVA*SFLQKQLF 1885
Score = 23.1 bits (44), Expect(3) = 2e-039
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / -2
Query: 714 NNIPGHQHDASPALQNAT 661
N IP H++ AS NAT
Sbjct: 2205 NTIPEHRYGASATFCNAT 2152
Score = 22.6 bits (43), Expect(3) = 5e-048
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 916 WSKMLTSMLEV 948
WS+MLTS+++V
Sbjct: 2246 WSEMLTSLVQV 2278
>gb|AACV01002753.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002753, whole
genome shotgun sequence
Length = 18525
Score = 100 bits (213), Expect(4) = 1e-042
Identities = 42/52 (80%), Positives = 44/52 (84%)
Frame = +1 / -2
Query: 61 VVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVWL 216
V+ QTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLSIREGIG +L
Sbjct: 13787 VLWQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIGWFSYL 13632
Score = 77.1 bits (162), Expect(3) = 7e-032
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = -2 / +1
Query: 200 PIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV 72
PIPSR+DK GL EFTRN+SPM R*FVGT TLHSSSSPLSV
Sbjct: 13648 PIPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV 13776
Score = 75.3 bits (158), Expect(3) = 1e-025
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = -1 / +3
Query: 201 TDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSL 70
TDSFSN *I S VHQKY+T+V+MICWHI+ QFFVAFVSL
Sbjct: 13647 TDSFSNG*IWSYYLLRVHQKYVTNVKMICWHINAAQFFVAFVSL 13778
Score = 71.2 bits (149), Expect(4) = 1e-042
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3 / -2
Query: 393 AEIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
+EIIVSGGMTMPQVIASLEP PRKSQNIRLNR+
Sbjct: 13460 SEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRI 13362
Score = 70.3 bits (147), Expect(3) = 7e-021
Identities = 32/44 (72%), Positives = 32/44 (72%)
Frame = +2 / -3
Query: 71 RLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYLFEKESV 202
RLTKATKNC MCQQII T V YFW*T *D IY FEKESV
Sbjct: 13777 RLTKATKNCAAFMCQQIIFTLVTYFW*TLRR**DQIYPFEKESV 13646
Score = 65.7 bits (137), Expect(3) = 7e-032
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -3 / +1
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETKRMNNILIYQF 353
+ILFRR+FWLF G+GS DAIT G+VIPPETIIS ++ L +F
Sbjct: 13360 IILFRRIFWLFLGVGSRDAITCGIVIPPETIISE*CRKKRKTLY*KF 13500
Score = 56.1 bits (116), Expect(4) = 1e-042
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1 / -1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQ 72
AIIRHPRIGEYAFGFITSTVVLQ
Sbjct: 14001 AIIRHPRIGEYAFGFITSTVVLQ 13933
Score = 51.0 bits (105), Expect(3) = 7e-032
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -2 / +2
Query: 71 *RTTVDVMNPNAYSPIRG*RIIA 3
*RTTVDV+NPNAYSPIRG*RIIA
Sbjct: 13934 *RTTVDVINPNAYSPIRG*RIIA 14002
Score = 49.6 bits (102), Expect(3) = 1e-025
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = -1 / +1
Query: 72 LKDHR*CYESKCIFTNSWMTNY 7
LK++ *CY+SKCIFTN+WMTNY
Sbjct: 13933 LKNNS*CYKSKCIFTNTWMTNY 13998
Score = 48.3 bits (99), Expect(3) = 7e-021
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2 / -1
Query: 395 RNNCFRRDDHASGDCITGAHATEKPEHSSK*NDVM*NKPHASRSKFPTYITQLVCFACLL 574
RNNCF R+D+A+GD + H E+PE+ SK*N+ + + +S I+Q + A L+
Sbjct: 13458 RNNCFWRNDYATGDRVP*THPKEEPEYPSK*NNDIMSYESSSAQHGGLLISQQLAPAILV 13279
Query: 575 IL 580
+
Sbjct: 13278 FM 13273
Score = 47.8 bits (98), Expect(3) = 1e-025
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -2 / +3
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYFCRNQKNE 375
+SI*T++LA PW G + +HL H H S NNYF QK +
Sbjct: 13362 YSI*TDILALPWGGFKGRDHLWHSHSSRNNYF*MMQKEK 13478
Score = 37.7 bits (76), Expect(3) = 7e-021
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2 / -2
Query: 5 Q*FVIHELVNMHLDS*HQRWSFR 73
+*FVIH LVNMHLD *HQ FR
Sbjct: 14000 R*FVIHVLVNMHLDL*HQLLFFR 13932
Score = 25.8 bits (50), Expect(4) = 1e-042
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3 / -3
Query: 546 PSWFVLHVY*YWVVHQADSMTCVLSHVIWIEEQLCA 653
PS HVY*Y QAD + C + + + LC+
Sbjct: 13294 PSNSCFHVY*YAHAPQADRVMCGIGVTLVL*PLLCS 13187
>ref|XM_475304.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 783
Score = 141 bits (303), Expect(2) = 1e-040
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AII HPRIGEYAFGFITST++LQTDKGDEELCSVYVPTNHLYIGDIFLV S RPNLS
Sbjct: 481 AIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLS 660
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 661 IREGIEIIV 687
Score = 116 bits (248), Expect(2) = 6e-029
Identities = 51/70 (72%), Positives = 57/70 (81%)
Frame = -2 / -2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL + T+ +SP+YR* VGTYTLHSSSSPLSV*R VDVMNPNAY
Sbjct: 689 ETMISIPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSV*RIIVDVMNPNAY 510
Query: 32 SPIRG*RIIA 3
SPIRG* IIA
Sbjct: 509 SPIRG*LIIA 480
Score = 100 bits (213), Expect(2) = 6e-023
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -1 / -1
Query: 192 FSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIFTNSWMT 13
FSN IR +Q+ +TD+ MI WHI+T QFF+ FVSLKDHR CYESKCIFTN+ MT
Sbjct: 669 FSNGQIRPYNLLRPNQEDVTDI*MIGWHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMT 490
Query: 12 NYC 4
NYC
Sbjct: 489 NYC 481
Score = 52.4 bits (108), Expect(2) = 1e-040
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIA+ P K Q+ RLNRM
Sbjct: 676 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRM 771
Score = 38.6 bits (78), Expect(2) = 6e-029
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -3 / -2
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILF+R+ G+ AIT GMVIPPET+IS ++
Sbjct: 773 IILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSR 663
Score = 34.5 bits (69), Expect(2) = 6e-023
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 495 TSFYLDECSGFSVAWAPVMQSPEAWSSLLKQLFL 394
+SF L+ CS + V+QSP AWS L KQ FL
Sbjct: 775 SSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FL 674
>gb|CB653924.1|CB653924 OSJNEc05G06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05G06 3', mRNA sequence
Length = 788
Score = 141 bits (303), Expect(2) = 1e-040
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +1 / -2
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AII HPRIGEYAFGFITST++LQTDKGDEELCSVYVPTNHLYIGDIFLV S RPNLS
Sbjct: 550 AIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLS 371
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 370 IREGIEIIV 344
Score = 116 bits (248), Expect(2) = 6e-029
Identities = 51/70 (72%), Positives = 57/70 (81%)
Frame = -2 / +3
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL + T+ +SP+YR* VGTYTLHSSSSPLSV*R VDVMNPNAY
Sbjct: 342 ETMISIPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSV*RIIVDVMNPNAY 521
Query: 32 SPIRG*RIIA 3
SPIRG* IIA
Sbjct: 522 SPIRG*LIIA 551
Score = 100 bits (213), Expect(2) = 6e-023
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -1 / +2
Query: 192 FSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIFTNSWMT 13
FSN IR +Q+ +TD+ MI WHI+T QFF+ FVSLKDHR CYESKCIFTN+ MT
Sbjct: 362 FSNGQIRPYNLLRPNQEDVTDI*MIGWHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMT 541
Query: 12 NYC 4
NYC
Sbjct: 542 NYC 550
Score = 52.4 bits (108), Expect(2) = 1e-040
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIA+ P K Q+ RLNRM
Sbjct: 355 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRM 260
Score = 38.6 bits (78), Expect(2) = 6e-029
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -3 / +3
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILF+R+ G+ AIT GMVIPPET+IS ++
Sbjct: 258 IILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSR 368
Score = 34.5 bits (69), Expect(2) = 6e-023
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1 / +1
Query: 495 TSFYLDECSGFSVAWAPVMQSPEAWSSLLKQLFL 394
+SF L+ CS + V+QSP AWS L KQ FL
Sbjct: 256 SSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FL 357
>dbj|AK059283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D06, full
insert sequence
Length = 1253
Score = 141 bits (303), Expect(2) = 2e-040
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AII HPRIGEYAFGFITST++LQTDKGDEELCSVYVPTNHLYIGDIFLV S RPNLS
Sbjct: 672 AIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLS 851
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 852 IREGIEIIV 878
Score = 116 bits (248), Expect(2) = 1e-028
Identities = 51/70 (72%), Positives = 57/70 (81%)
Frame = -2 / -2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL + T+ +SP+YR* VGTYTLHSSSSPLSV*R VDVMNPNAY
Sbjct: 880 ETMISIPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSV*RIIVDVMNPNAY 701
Query: 32 SPIRG*RIIA 3
SPIRG* IIA
Sbjct: 700 SPIRG*LIIA 671
Score = 100 bits (213), Expect(2) = 1e-022
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -1 / -1
Query: 192 FSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIFTNSWMT 13
FSN IR +Q+ +TD+ MI WHI+T QFF+ FVSLKDHR CYESKCIFTN+ MT
Sbjct: 860 FSNGQIRPYNLLRPNQEDVTDI*MIGWHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMT 681
Query: 12 NYC 4
NYC
Sbjct: 680 NYC 672
Score = 52.4 bits (108), Expect(2) = 2e-040
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIA+ P K Q+ RLNRM
Sbjct: 867 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRM 962
Score = 38.6 bits (78), Expect(2) = 1e-028
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -3 / -2
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILF+R+ G+ AIT GMVIPPET+IS ++
Sbjct: 964 IILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSR 854
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 495 TSFYLDECSGFSVAWAPVMQSPEAWSSLLKQLFL 394
+SF L+ CS + V+QSP AWS L KQ FL
Sbjct: 966 SSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FL 865
>dbj|AK121867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103I02, full
insert sequence
Length = 1424
Score = 141 bits (303), Expect(2) = 3e-040
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AII HPRIGEYAFGFITST++LQTDKGDEELCSVYVPTNHLYIGDIFLV S RPNLS
Sbjct: 852 AIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLS 1031
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 1032 IREGIEIIV 1058
Score = 116 bits (248), Expect(2) = 1e-028
Identities = 51/70 (72%), Positives = 57/70 (81%)
Frame = -2 / -2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL + T+ +SP+YR* VGTYTLHSSSSPLSV*R VDVMNPNAY
Sbjct: 1060 ETMISIPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSV*RIIVDVMNPNAY 881
Query: 32 SPIRG*RIIA 3
SPIRG* IIA
Sbjct: 880 SPIRG*LIIA 851
Score = 100 bits (213), Expect(2) = 1e-022
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -1 / -1
Query: 192 FSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIFTNSWMT 13
FSN IR +Q+ +TD+ MI WHI+T QFF+ FVSLKDHR CYESKCIFTN+ MT
Sbjct: 1040 FSNGQIRPYNLLRPNQEDVTDI*MIGWHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMT 861
Query: 12 NYC 4
NYC
Sbjct: 860 NYC 852
Score = 52.4 bits (108), Expect(2) = 3e-040
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIA+ P K Q+ RLNRM
Sbjct: 1047 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRM 1142
Score = 38.6 bits (78), Expect(2) = 1e-028
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -3 / -2
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILF+R+ G+ AIT GMVIPPET+IS ++
Sbjct: 1144 IILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSR 1034
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 495 TSFYLDECSGFSVAWAPVMQSPEAWSSLLKQLFL 394
+SF L+ CS + V+QSP AWS L KQ FL
Sbjct: 1146 SSFCLNGCSDPYGVFVLVLQSPAAWSFLQKQ*FL 1045
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0677H08
Length = 178830
Score = 100 bits (213), Expect(3) = 6e-040
Identities = 42/52 (80%), Positives = 44/52 (84%)
Frame = +1 / -3
Query: 61 VVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVWL 216
V+ QTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLSIREGIG +L
Sbjct: 39505 VLWQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIGWFSYL 39350
Score = 77.1 bits (162), Expect(3) = 6e-030
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = -2 / +3
Query: 200 PIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV 72
PIPSR+DK GL EFTRN+SPM R*FVGT TLHSSSSPLSV
Sbjct: 39366 PIPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV 39494
Score = 75.3 bits (158), Expect(3) = 9e-024
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = -1 / +2
Query: 201 TDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSL 70
TDSFSN *I S VHQKY+T+V+MICWHI+ QFFVAFVSL
Sbjct: 39365 TDSFSNG*IWSYYLLRVHQKYVTNVKMICWHINAAQFFVAFVSL 39496
Score = 71.2 bits (149), Expect(3) = 6e-040
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3 / -3
Query: 393 AEIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
+EIIVSGGMTMPQVIASLEP PRKSQNIRLNR+
Sbjct: 39178 SEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRI 39080
Score = 65.7 bits (137), Expect(3) = 6e-030
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -3 / +3
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETKRMNNILIYQF 353
+ILFRR+FWLF G+GS DAIT G+VIPPETIIS ++ L +F
Sbjct: 39078 IILFRRIFWLFLGVGSRDAITCGIVIPPETIISE*CRKKRKTLY*KF 39218
Score = 56.1 bits (116), Expect(3) = 6e-040
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1 / -2
Query: 4 AIIRHPRIGEYAFGFITSTVVLQ 72
AIIRHPRIGEYAFGFITSTVVLQ
Sbjct: 39719 AIIRHPRIGEYAFGFITSTVVLQ 39651
Score = 51.0 bits (105), Expect(3) = 6e-030
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -2 / +1
Query: 71 *RTTVDVMNPNAYSPIRG*RIIA 3
*RTTVDV+NPNAYSPIRG*RIIA
Sbjct: 39652 *RTTVDVINPNAYSPIRG*RIIA 39720
Score = 49.6 bits (102), Expect(3) = 9e-024
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = -1 / +3
Query: 72 LKDHR*CYESKCIFTNSWMTNY 7
LK++ *CY+SKCIFTN+WMTNY
Sbjct: 39651 LKNNS*CYKSKCIFTNTWMTNY 39716
Score = 47.8 bits (98), Expect(3) = 9e-024
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -2 / +2
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYFCRNQKNE 375
+SI*T++LA PW G + +HL H H S NNYF QK +
Sbjct: 39080 YSI*TDILALPWGGFKGRDHLWHSHSSRNNYF*MMQKEK 39196
>gb|CA999153.1|CA999153 S234N_C11 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 676
Score = 141 bits (303), Expect(2) = 6e-040
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AII HPRIGEYAFGFITST++LQTDKGDEELCSVYVPTNHLYIGDIFLV S RPNLS
Sbjct: 219 AIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLS 398
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 399 IREGIEIIV 425
Score = 116 bits (248), Expect(2) = 5e-029
Identities = 51/70 (72%), Positives = 57/70 (81%)
Frame = -2 / -1
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL + T+ +SP+YR* VGTYTLHSSSSPLSV*R VDVMNPNAY
Sbjct: 427 ETMISIPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSV*RIIVDVMNPNAY 248
Query: 32 SPIRG*RIIA 3
SPIRG* IIA
Sbjct: 247 SPIRG*LIIA 218
Score = 100 bits (213), Expect(2) = 1e-022
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -1 / -3
Query: 192 FSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIFTNSWMT 13
FSN IR +Q+ +TD+ MI WHI+T QFF+ FVSLKDHR CYESKCIFTN+ MT
Sbjct: 407 FSNGQIRPYNLLRPNQEDVTDI*MIGWHIYTAQFFITFVSLKDHRRCYESKCIFTNTGMT 228
Query: 12 NYC 4
NYC
Sbjct: 227 NYC 219
Score = 50.1 bits (103), Expect(2) = 6e-040
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMP VIA+ P K Q+ RLNRM
Sbjct: 414 EIIVSGGMTMPHVIAAPGQTPHKGQSTRLNRM 509
Score = 38.6 bits (78), Expect(2) = 5e-029
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -3 / -1
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILF+R+ G+ AIT GMVIPPET+IS ++
Sbjct: 511 IILFKRVL*PLWGVCPGAAITCGMVIPPETMISIPSR 401
Score = 33.1 bits (66), Expect(2) = 1e-022
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 440 CNHLRHGHPS*NNYF 396
CNH+RHGH S NN F
Sbjct: 458 CNHMRHGHSSRNNDF 414
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 100 bits (213), Expect(3) = 3e-036
Identities = 42/52 (80%), Positives = 44/52 (84%)
Frame = +1 / -2
Query: 61 VVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVWL 216
V+ QTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLSIREGIG +L
Sbjct: 12107084 VLWQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIGWFSYL 12106929
Score = 77.1 bits (162), Expect(3) = 3e-026
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = -2 / +1
Query: 200 PIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV 72
PIPSR+DK GL EFTRN+SPM R*FVGT TLHSSSSPLSV
Sbjct: 12106945 PIPSRMDKFGLIISSEFTRNMSPM*R*FVGT*TLHSSSSPLSV 12107073
Score = 71.2 bits (149), Expect(3) = 3e-036
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3 / -2
Query: 393 AEIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
+EIIVSGGMTMPQVIASLEP PRKSQNIRLNR+
Sbjct: 12106757 SEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRI 12106659
Score = 65.7 bits (137), Expect(3) = 3e-026
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -3 / +1
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETKRMNNILIYQF 353
+ILFRR+FWLF G+GS DAIT G+VIPPETIIS ++ L +F
Sbjct: 12106657 IILFRRIFWLFLGVGSRDAITCGIVIPPETIISE*CRKKRKTLY*KF 12106797
Score = 56.1 bits (116), Expect(3) = 3e-036
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1 / -1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQ 72
AIIRHPRIGEYAFGFITSTVVLQ
Sbjct: 12107298 AIIRHPRIGEYAFGFITSTVVLQ 12107230
Score = 51.0 bits (105), Expect(3) = 3e-026
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -2 / +2
Query: 71 *RTTVDVMNPNAYSPIRG*RIIA 3
*RTTVDV+NPNAYSPIRG*RIIA
Sbjct: 12107231 *RTTVDVINPNAYSPIRG*RIIA 12107299
>gb|AACV01012264.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012264, whole
genome shotgun sequence
Length = 25704
Score = 99.6 bits (211), Expect(3) = 2e-034
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1 / +1
Query: 61 VVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVWLI 219
+ LQTDKGDEELCSVYVPTNHLYIGDIFLV S RPNLSIREGIG ++ I
Sbjct: 6706 IALQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGIGWFLFQI 6864
Score = 74.4 bits (156), Expect(3) = 7e-025
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -2 / -2
Query: 200 PIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV 72
PIPSR+DK GL + T+ +SP+YR* VGTYTLHSSSSPLSV
Sbjct: 6845 PIPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSV 6717
Score = 55.6 bits (115), Expect(3) = 7e-025
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -1
Query: 72 LKDHR*CYESKCIFTNSWMTNYC 4
LKDHR CYESKCIFTN+ MTNYC
Sbjct: 6078 LKDHRRCYESKCIFTNTGMTNYC 6010
Score = 52.4 bits (108), Expect(3) = 2e-034
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIA+ P K Q+ RLNRM
Sbjct: 6972 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRM 7067
Score = 51.5 bits (106), Expect(3) = 2e-034
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQ 72
AII HPRIGEYAFGFITST++LQ
Sbjct: 6010 AIISHPRIGEYAFGFITSTMILQ 6078
Score = 40.9 bits (83), Expect(3) = 7e-025
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / -2
Query: 440 CNHLRHGHPS*NNYFCRNQK 381
CNHLRHGH S NN FC+ K
Sbjct: 7016 CNHLRHGHSSRNNDFCKKYK 6957
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05,
complete sequence
Length = 109126
Score = 99.6 bits (211), Expect(3) = 3e-033
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1 / +3
Query: 61 VVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVWLI 219
+ LQTDKGDEELCSVYVPTNHLYIGDIFLV S RPNLSIREGIG ++ I
Sbjct: 55926 IALQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGIGWFLFQI 56084
Score = 74.4 bits (156), Expect(3) = 1e-023
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -2 / -1
Query: 200 PIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV 72
PIPSR+DK GL + T+ +SP+YR* VGTYTLHSSSSPLSV
Sbjct: 56065 PIPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSV 55937
Score = 55.6 bits (115), Expect(3) = 1e-023
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 72 LKDHR*CYESKCIFTNSWMTNYC 4
LKDHR CYESKCIFTN+ MTNYC
Sbjct: 55298 LKDHRRCYESKCIFTNTGMTNYC 55230
Score = 52.4 bits (108), Expect(3) = 3e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIA+ P K Q+ RLNRM
Sbjct: 56192 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRM 56287
Score = 51.5 bits (106), Expect(3) = 3e-033
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQ 72
AII HPRIGEYAFGFITST++LQ
Sbjct: 55230 AIISHPRIGEYAFGFITSTMILQ 55298
Score = 40.9 bits (83), Expect(3) = 1e-023
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / -1
Query: 440 CNHLRHGHPS*NNYFCRNQK 381
CNHLRHGH S NN FC+ K
Sbjct: 56236 CNHLRHGHSSRNNDFCKKYK 56177
>ref|NT_107212.1| Oryza sativa (japonica cultivar-group)
Length = 2712182
Score = 99.6 bits (211), Expect(3) = 2e-030
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1 / +1
Query: 61 VVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVWLI 219
+ LQTDKGDEELCSVYVPTNHLYIGDIFLV S RPNLSIREGIG ++ I
Sbjct: 2574685 IALQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGIGWFLFQI 2574843
Score = 74.4 bits (156), Expect(3) = 5e-021
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -2 / -1
Query: 200 PIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV 72
PIPSR+DK GL + T+ +SP+YR* VGTYTLHSSSSPLSV
Sbjct: 2574824 PIPSRMDKFGLIISSDLTKKMSPIYR*LVGTYTLHSSSSPLSV 2574696
Score = 55.6 bits (115), Expect(3) = 5e-021
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 72 LKDHR*CYESKCIFTNSWMTNYC 4
LKDHR CYESKCIFTN+ MTNYC
Sbjct: 2574057 LKDHRRCYESKCIFTNTGMTNYC 2573989
Score = 52.4 bits (108), Expect(3) = 2e-030
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIA+ P K Q+ RLNRM
Sbjct: 2574951 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRM 2575046
Score = 51.5 bits (106), Expect(3) = 2e-030
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQ 72
AII HPRIGEYAFGFITST++LQ
Sbjct: 2573989 AIISHPRIGEYAFGFITSTMILQ 2574057
Score = 40.9 bits (83), Expect(3) = 5e-021
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / -1
Query: 440 CNHLRHGHPS*NNYFCRNQK 381
CNHLRHGH S NN FC+ K
Sbjct: 2574995 CNHLRHGHSSRNNDFCKKYK 2574936
>dbj|AK059220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D01, full
insert sequence
Length = 1170
Score = 122 bits (262), Expect(2) = 3e-030
Identities = 52/68 (76%), Positives = 57/68 (83%)
Frame = +1 / +2
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS+V LQ+ G EEL VYVPTNHLYIGDIF+VNS RPNLS+
Sbjct: 653 IIRHPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSV 832
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 833 REGIEIVV 856
Score = 37.3 bits (75), Expect(2) = 3e-030
Identities = 12/19 (63%), Positives = 19/19 (100%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEP 452
EI+VSGGM+MPQ++++L+P
Sbjct: 845 EIVVSGGMSMPQILSTLDP 901
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 99.6 bits (211), Expect(3) = 3e-029
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1 / +3
Query: 61 VVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVWLI 219
+ LQTDKGDEELCSVYVPTNHLYIGDIFLV S RPNLSIREGIG ++ I
Sbjct: 3606600 IALQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGIGWFLFQI 3606758
Score = 52.4 bits (108), Expect(3) = 3e-029
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIA+ P K Q+ RLNRM
Sbjct: 3606866 EIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRM 3606961
Score = 51.5 bits (106), Expect(3) = 3e-029
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQ 72
AII HPRIGEYAFGFITST++LQ
Sbjct: 3605904 AIISHPRIGEYAFGFITSTMILQ 3605972
>dbj|AK071119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M07, full
insert sequence
Length = 1309
Score = 120 bits (256), Expect(2) = 1e-028
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +1 / +3
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS V+LQ +E++ VYVPTNHLYIGDIFLVNS RPNLS+
Sbjct: 633 IIRHPRIGEYAFGFITSEVLLQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPNLSV 812
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 813 REGIEIVV 836
Score = 35.0 bits (70), Expect(2) = 1e-028
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNR 488
EI+VSGGM+MPQV++ +E + +R +R
Sbjct: 825 EIVVSGGMSMPQVLSIVETEQNQWSRMRSSR 917
>gb|AU030028.1|AU030028 AU030028 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50520_2Z, mRNA sequence
Length = 707
Score = 118 bits (253), Expect(2) = 5e-028
Identities = 49/65 (75%), Positives = 54/65 (83%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPRIGEYAFGFITS V+LQ +E++ VYVPTNHLYIGDIFLVNS RPNLS
Sbjct: 108 AIIRHPRIGEYAFGFITSEVLLQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPNLS 287
Query: 184 IREGI 198
+REGI
Sbjct: 288 VREGI 302
Score = 33.1 bits (66), Expect(2) = 5e-028
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3 / +1
Query: 390 SAEIIVSGGMTMPQVIASLEPMPRKSQNIRLNR 488
++EI+VSGG +MPQV++ +E + +R +R
Sbjct: 298 ASEIVVSGGXSMPQVLSIVETEQNQWSRMRSSR 396
>gb|C99208.1|C99208 C99208 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10436_8Z, mRNA sequence
Length = 645
Score = 69.8 bits (146), Expect(3) = 7e-028
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +1 / +2
Query: 16 HPRIGEYAFGFITSTVVLQTDKGDEELC 99
HPRIGEYAFGFITST++LQTDKGDEELC
Sbjct: 104 HPRIGEYAFGFITSTMILQTDKGDEELC 187
Score = 67.0 bits (140), Expect(3) = 7e-028
Identities = 28/33 (84%), Positives = 28/33 (84%)
Frame = +1 / +3
Query: 100 SVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGI 198
SVYVPTNHLYIGDIFLV S RPNLSIREGI
Sbjct: 189 SVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGI 287
Score = 33.6 bits (67), Expect(3) = 7e-028
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3 / +1
Query: 402 IVSGGMTMPQVIAS 443
IVSGGMTMPQVIAS
Sbjct: 295 IVSGGMTMPQVIAS 336
>gb|AU030027.1|AU030027 AU030027 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50520_1A, mRNA sequence
Length = 366
Score = 120 bits (256), Expect = 3e-025
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +1 / +3
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS V+LQ +E++ VYVPTNHLYIGDIFLVNS RPNLS+
Sbjct: 51 IIRHPRIGEYAFGFITSEVLLQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPNLSV 230
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 231 REGIEIVV 254
>gb|AU077950.1|AU077950 AU077950 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C12951_8Z, mRNA sequence
Length = 718
Score = 70.7 bits (148), Expect(3) = 5e-024
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASLEP PRKSQNIRLNR+
Sbjct: 185 EIIVSGGMTMPQVIASLEPTPRKSQNIRLNRI 280
Score = 65.2 bits (136), Expect(4) = 9e-021
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = -3 / -2
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+ILFRR+FWLF G+GS DAIT G+VIPPETIIS ++
Sbjct: 282 IILFRRIFWLFLGVGSRDAITCGIVIPPETIISIPSR 172
Score = 64.3 bits (134), Expect(3) = 5e-024
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +1 / +2
Query: 109 VPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVV 210
+PTNHLYIGDIFLVNS RPNLSIREGI ++V
Sbjct: 95 MPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIV 196
Score = 53.8 bits (111), Expect(4) = 9e-021
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -2 / -2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVG 111
+T I IPSR+DK GL EFTRN+SPM R*FVG
Sbjct: 198 ETIISIPSRMDKFGLIISSEFTRNMSPM*R*FVG 97
Score = 23.1 bits (44), Expect(4) = 9e-021
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / -3
Query: 714 NNIPGHQHDASPALQNAT 661
N IP H++ AS NAT
Sbjct: 506 NTIPEHRYGASATFCNAT 453
Score = 22.6 bits (43), Expect(3) = 5e-024
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 916 WSKMLTSMLEV 948
WS+MLTS+++V
Sbjct: 547 WSEMLTSLVQV 579
Score = 22.1 bits (42), Expect(4) = 9e-021
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -2 / -1
Query: 1040 FFFFFWSE 1017
FFFFFW +
Sbjct: 718 FFFFFWMQ 695
>gb|AACV01012610.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012610, whole
genome shotgun sequence
Length = 16739
Score = 78.0 bits (164), Expect(3) = 5e-024
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = +1 / -1
Query: 70 QTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIG 201
Q+ G EEL VYVPTNHLYIGDIF+VNS RPNLS+REGIG
Sbjct: 10868 QSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIG 10737
Score = 49.6 bits (102), Expect(3) = 5e-024
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1 / -3
Query: 7 IIRHPRIGEYAFGFITSTVVLQ 72
IIRHPRIGEYAFGFITS+V LQ
Sbjct: 11100 IIRHPRIGEYAFGFITSSVSLQ 11035
Score = 39.1 bits (79), Expect(3) = 5e-024
Identities = 13/20 (65%), Positives = 20/20 (100%)
Frame = +3 / -2
Query: 393 AEIIVSGGMTMPQVIASLEP 452
AEI+VSGGM+MPQ++++L+P
Sbjct: 10630 AEIVVSGGMSMPQILSTLDP 10571
>gb|AACV01003836.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003836, whole
genome shotgun sequence
Length = 32497
Score = 78.5 bits (165), Expect(3) = 5e-023
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +1 / +1
Query: 58 TVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVW 213
T + Q +E++ VYVPTNHLYIGDIFLVNS RPNLS+REGIGM ++
Sbjct: 26140 TSLRQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPNLSVREGIGMRIF 26295
Score = 50.1 bits (103), Expect(3) = 5e-023
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1 / +3
Query: 7 IIRHPRIGEYAFGFITSTVVLQ 72
IIRHPRIGEYAFGFITS V+LQ
Sbjct: 24579 IIRHPRIGEYAFGFITSEVLLQ 24644
Score = 36.8 bits (74), Expect(3) = 5e-023
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3 / +2
Query: 393 AEIIVSGGMTMPQVIASLEPMPRKSQNIRLNR 488
AEI+VSGGM+MPQV++ +E + +R +R
Sbjct: 26369 AEIVVSGGMSMPQVLSIVETEQNQWSRMRSSR 26464
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11,
complete sequence
Length = 133352
Score = 78.0 bits (164), Expect(3) = 3e-022
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = +1 / -2
Query: 70 QTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIG 201
Q+ G EEL VYVPTNHLYIGDIF+VNS RPNLS+REGIG
Sbjct: 98140 QSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIG 98009
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1 / -1
Query: 7 IIRHPRIGEYAFGFITSTVVLQ 72
IIRHPRIGEYAFGFITS+V LQ
Sbjct: 98372 IIRHPRIGEYAFGFITSSVSLQ 98307
Score = 39.1 bits (79), Expect(3) = 3e-022
Identities = 13/20 (65%), Positives = 20/20 (100%)
Frame = +3 / -3
Query: 393 AEIIVSGGMTMPQVIASLEP 452
AEI+VSGGM+MPQ++++L+P
Sbjct: 97902 AEIVVSGGMSMPQILSTLDP 97843
>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0693E08
Length = 157969
Score = 78.5 bits (165), Expect(3) = 9e-022
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +1 / -3
Query: 58 TVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVW 213
T + Q +E++ VYVPTNHLYIGDIFLVNS RPNLS+REGIGM ++
Sbjct: 81890 TSLRQDYSSEEQMYCVYVPTNHLYIGDIFLVNSSDVIRPNLSVREGIGMRIF 81735
Score = 50.1 bits (103), Expect(3) = 9e-022
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1 / -2
Query: 7 IIRHPRIGEYAFGFITSTVVLQ 72
IIRHPRIGEYAFGFITS V+LQ
Sbjct: 83451 IIRHPRIGEYAFGFITSEVLLQ 83386
Score = 36.8 bits (74), Expect(3) = 9e-022
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3 / -1
Query: 393 AEIIVSGGMTMPQVIASLEPMPRKSQNIRLNR 488
AEI+VSGGM+MPQV++ +E + +R +R
Sbjct: 81661 AEIVVSGGMSMPQVLSIVETEQNQWSRMRSSR 81566
>ref|NT_107218.1| Oryza sativa (japonica cultivar-group)
Length = 369997
Score = 78.0 bits (164), Expect(3) = 2e-021
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = +1 / -1
Query: 70 QTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIG 201
Q+ G EEL VYVPTNHLYIGDIF+VNS RPNLS+REGIG
Sbjct: 98140 QSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIG 98009
Score = 49.6 bits (102), Expect(3) = 2e-021
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1 / -3
Query: 7 IIRHPRIGEYAFGFITSTVVLQ 72
IIRHPRIGEYAFGFITS+V LQ
Sbjct: 98372 IIRHPRIGEYAFGFITSSVSLQ 98307
Score = 39.1 bits (79), Expect(3) = 2e-021
Identities = 13/20 (65%), Positives = 20/20 (100%)
Frame = +3 / -2
Query: 393 AEIIVSGGMTMPQVIASLEP 452
AEI+VSGGM+MPQ++++L+P
Sbjct: 97902 AEIVVSGGMSMPQILSTLDP 97843
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 7,346,093,782
Number of Sequences: 438736
Number of extensions: 119455486
Number of successful extensions: 632619
Number of sequences better than 1.0e-020: 34
length of database: 933,473,305
effective HSP length: 60
effective length of database: 907,149,145
effective search space used: 259444655470
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)