TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418946.2.2
(710 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB659584.1|CB659584 OSJNEc16L01.r OSJNEc Oryza sativa (j... 320 8e-086
gb|AY324384.1| Oryza sativa (japonica cultivar-group) callo... 320 8e-086
ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA 320 8e-086
dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA... 319 3e-085
gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) c... 148 5e-075
dbj|AP005750.3| Oryza sativa (japonica cultivar-group) geno... 148 2e-071
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 148 2e-071
gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) c... 149 4e-071
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 148 2e-070
dbj|AP005290.2| Oryza sativa (japonica cultivar-group) geno... 149 9e-070
dbj|AP004082.3| Oryza sativa (japonica cultivar-group) geno... 149 1e-069
ref|NM_187591.1| Oryza sativa (japonica cultivar-group), p... 255 1e-068
dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA... 255 1e-068
dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA... 255 1e-068
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 148 5e-068
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 148 5e-068
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 148 5e-068
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 149 3e-066
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 149 3e-066
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 149 3e-066
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 149 3e-066
gb|CB642890.1|CB642890 OSJNEb03E21.r OSJNEb Oryza sativa (j... 255 4e-066
gb|CB677903.1|CB677903 OSJNEe15F12.r OSJNEe Oryza sativa (j... 255 4e-066
gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) c... 120 2e-055
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 120 2e-051
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 120 2e-051
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 120 2e-051
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 120 2e-051
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 120 2e-051
gb|AC144426.1| Oryza sativa (japonica cultivar-group) chrom... 120 2e-051
gb|AC104427.2| Oryza sativa (japonica cultivar-group) chrom... 120 2e-051
dbj|AG210594.1| Oryza sativa (japonica cultivar-group) DNA,... 120 2e-051
gb|CB662166.1|CB662166 OSJNEd05O23.f OSJNEd Oryza sativa (j... 198 3e-051
ref|NM_193203.1| Oryza sativa (japonica cultivar-group), p... 105 2e-047
dbj|AG209376.1| Oryza sativa (japonica cultivar-group) DNA,... 120 2e-046
ref|NM_193211.1| Oryza sativa (japonica cultivar-group), p... 107 9e-046
dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA... 107 3e-045
dbj|AG210620.1| Oryza sativa (japonica cultivar-group) DNA,... 106 5e-045
dbj|AG207097.1| Oryza sativa (japonica cultivar-group) DNA,... 106 3e-041
gb|CB662167.1|CB662167 OSJNEd05O23.r OSJNEd Oryza sativa (j... 162 9e-041
dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chro... 117 2e-038
dbj|AP007257.2| Oryza sativa (japonica cultivar-group) geno... 117 5e-038
dbj|AP007226.1| Oryza sativa (japonica cultivar-group) geno... 117 5e-038
dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA... 160 2e-037
dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA... 160 2e-037
dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA... 160 2e-037
gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) c... 160 2e-037
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 160 2e-037
ref|NM_191270.1| Oryza sativa (japonica cultivar-group), p... 160 2e-037
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 160 2e-037
dbj|AP003249.3| Oryza sativa (japonica cultivar-group) geno... 160 2e-037
dbj|AP003268.4| Oryza sativa (japonica cultivar-group) geno... 160 2e-037
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 160 2e-037
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 160 2e-037
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 160 2e-037
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 117 3e-036
gb|AACV01001409.1| Oryza sativa (japonica cultivar-group) c... 99 4e-036
dbj|AP003447.2| Oryza sativa (japonica cultivar-group) geno... 99 7e-035
gb|AACV01001413.1| Oryza sativa (japonica cultivar-group) c... 96 1e-033
dbj|AP003445.2| Oryza sativa (japonica cultivar-group) geno... 96 5e-033
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 99 7e-033
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 99 7e-033
gb|C24849.1|C24849 C24849 Rice green shoot Oryza sativa (ja... 144 1e-032
dbj|AK099834.1| Oryza sativa (japonica cultivar-group) cDNA... 96 1e-031
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 81 2e-031
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 81 2e-031
dbj|AP005614.2| Oryza sativa (japonica cultivar-group) geno... 81 2e-031
gb|AACV01003740.1| Oryza sativa (japonica cultivar-group) c... 81 2e-031
gb|CB666398.1|CB666398 OSJNEd13E16.f OSJNEd Oryza sativa (j... 138 6e-031
gb|CB666399.1|CB666399 OSJNEd13E16.r OSJNEd Oryza sativa (j... 138 6e-031
gb|CB671522.1|CB671522 OSJNEe05C09.r OSJNEe Oryza sativa (j... 138 6e-031
dbj|AK059373.1| Oryza sativa (japonica cultivar-group) cDNA... 138 6e-031
dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA... 138 6e-031
ref|NM_187562.1| Oryza sativa (japonica cultivar-group), p... 138 6e-031
dbj|AK060407.1| Oryza sativa (japonica cultivar-group) cDNA... 79 8e-028
dbj|AP003264.3| Oryza sativa (japonica cultivar-group) geno... 79 1e-027
dbj|AP003223.3| Oryza sativa (japonica cultivar-group) geno... 79 1e-027
gb|AACV01002091.1| Oryza sativa (japonica cultivar-group) c... 79 1e-027
ref|NM_191973.1| Oryza sativa (japonica cultivar-group), p... 79 1e-027
gb|CG206659.1|CG206659 TOS0280 TAMU Rice Japonica Nipponbar... 106 2e-027
dbj|AG212310.1| Oryza sativa (japonica cultivar-group) DNA,... 106 8e-027
gb|CB684141.1|CB684141 OSJNEf13F24.r OSJNEf Oryza sativa (j... 122 4e-026
dbj|AK059569.1| Oryza sativa (japonica cultivar-group) cDNA... 122 6e-026
dbj|AK071856.1| Oryza sativa (japonica cultivar-group) cDNA... 122 6e-026
ref|XM_550490.1| Oryza sativa (japonica cultivar-group), mRNA 122 6e-026
dbj|AG207902.1| Oryza sativa (japonica cultivar-group) DNA,... 117 1e-024
gb|AACV01013161.1| Oryza sativa (japonica cultivar-group) c... 117 1e-024
gb|AQ272428.1|AQ272428 nbxb0027P18r CUGI Rice BAC Library O... 106 1e-024
dbj|AG209412.1| Oryza sativa (japonica cultivar-group) DNA,... 96 2e-024
gb|AACV01005773.1| Oryza sativa (japonica cultivar-group) c... 87 8e-024
gb|CB662462.1|CB662462 OSJNEd06I07.r OSJNEd Oryza sativa (j... 69 1e-023
gb|AC118980.2| Oryza sativa (japonica cultivar-group) chrom... 87 1e-023
gb|CB662405.1|CB662405 OSJNEd06G07.r OSJNEd Oryza sativa (j... 69 8e-022
>gb|CB659584.1|CB659584 OSJNEc16L01.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16L01 3', mRNA sequence
Length = 760
Score = 320 bits (694), Expect = 8e-086
Identities = 142/179 (79%), Positives = 151/179 (84%)
Frame = +3 / -3
Query: 30 YHLNITKKITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFI 209
Y L ITK +SVLVYC SWVVIFVILLVMKTVSVGRR+FSA+FQLVFRLIKGLIFI
Sbjct: 650 YGLVYHLNITKHTKSVLVYCLSWVVIFVILLVMKTVSVGRRKFSADFQLVFRLIKGLIFI 471
Query: 210 TFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARG 389
TF +I++ILIAIP MTV DIFVCILAFMPTGWGL AI+PVI + GLWGSIKALARG
Sbjct: 470 TFISIIIILIAIPHMTVQDIFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARG 291
Query: 390 YEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
YEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GLQISRI GHKKD T NKE*
Sbjct: 290 YEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 114
Score = 246 bits (532), Expect = 2e-063
Identities = 110/172 (63%), Positives = 125/172 (72%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 115 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 294
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
ALI+P +P+ ITG IA +P PVGMKARMQT MS TV+ GIAI+I M +NVI
Sbjct: 295 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVI 474
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTLWLSLVIF 50
NI PLINRNTSW SALN LPTDTVFITS+ITK+TTH++Q*T TL++ LV+F
Sbjct: 475 NINPLINRNTSWKSALNFRLPTDTVFITSRITKMTTHDRQ*TRTLFVCLVMF 630
Score = 181 bits (390), Expect = 7e-044
Identities = 77/172 (44%), Positives = 104/172 (60%)
Frame = +2 / -2
Query: 50 EDN*GQPECAGLLLLMGCNFCDFARYEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRG 229
E N EC GLL +MGC+ C+ A EDR+S + ++Q +P VPVD G DIYNIY H
Sbjct: 630 EHNQTHKECPGLLPVMGCHLCNSACDEDRVSWEAEIQRGLPTCVPVD*GVDIYNIYLHHY 451
Query: 230 NPNSDPWHDGAGHICLHPCFHAHWMGFXXDXXSDPXCDPQDWALGLDQGSCPGLRDPDGT 409
N +S+P +D GH+CLH C HA+W+G S + +G+DQG+C G+ D G
Sbjct: 450 NLDSNPSYDSPGHLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DHHGA 271
Query: 410 SPVHAHRLPRLXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQERXXXXEQRI 565
+H R+PRL V + +PDQ+A+QPG+QQ SADL QER EQ +
Sbjct: 270 PALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 115
Score = 146 bits (313), Expect(2) = 3e-040
Identities = 62/118 (52%), Positives = 82/118 (69%)
Frame = -1 / +3
Query: 404 HQDLVAPGKSLDRAPEPSLVDHRXDRXXXXXQTPSSGHESKDANKYVQHRHARDRY*DYH 225
H DL++P K LDR+P+P ++ D QTP+S HE K+ANK V H RD Y DY+
Sbjct: 276 HDDLISPRKRLDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKDVLDCHMRDCYQDYN 455
Query: 224 DGCKCYKYQTLDQPEH*LELCTEPSPAH*YGLHNEQNHKNYNP*EAINQHTLVVLSYL 51
DG KCYKYQ L+QPEH LE+ E P +*+GLH++QN+K+ NP*+AI+Q TL V Y+
Sbjct: 456 DGDKCYKYQPLNQPEHKLEVRAEFPPPN*HGLHHKQNYKDDNP*QAIDQDTLCVFGYV 629
Score = 43.2 bits (88), Expect(2) = 3e-040
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -3 / +2
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSG 463
CS L LSC + RSAD C* PG* A WSG
Sbjct: 122 CSV*LGLSCGRQGFARSADLC*RPG*RAFWSG 217
>gb|AY324384.1| Oryza sativa (japonica cultivar-group) callose synthase-like protein
mRNA, partial cds
Length = 2727
Score = 320 bits (694), Expect = 8e-086
Identities = 142/179 (79%), Positives = 151/179 (84%)
Frame = +3 / +1
Query: 30 YHLNITKKITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFI 209
Y L ITK +SVLVYC SWVVIFVILLVMKTVSVGRR+FSA+FQLVFRLIKGLIFI
Sbjct: 2191 YGLVYHLNITKHTKSVLVYCLSWVVIFVILLVMKTVSVGRRKFSADFQLVFRLIKGLIFI 2370
Query: 210 TFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARG 389
TF +I++ILIAIP MTV DIFVCILAFMPTGWGL AI+PVI + GLWGSIKALARG
Sbjct: 2371 TFISIIIILIAIPHMTVQDIFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARG 2550
Query: 390 YEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
YEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GLQISRI GHKKD T NKE*
Sbjct: 2551 YEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 2727
Score = 246 bits (532), Expect = 2e-063
Identities = 110/172 (63%), Positives = 125/172 (72%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 2726 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 2547
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
ALI+P +P+ ITG IA +P PVGMKARMQT MS TV+ GIAI+I M +NVI
Sbjct: 2546 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVI 2367
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTLWLSLVIF 50
NI PLINRNTSW SALN LPTDTVFITS+ITK+TTH++Q*T TL++ LV+F
Sbjct: 2366 NINPLINRNTSWKSALNFRLPTDTVFITSRITKMTTHDRQ*TRTLFVCLVMF 2211
Score = 181 bits (390), Expect = 7e-044
Identities = 77/172 (44%), Positives = 104/172 (60%)
Frame = +2 / +3
Query: 50 EDN*GQPECAGLLLLMGCNFCDFARYEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRG 229
E N EC GLL +MGC+ C+ A EDR+S + ++Q +P VPVD G DIYNIY H
Sbjct: 2211 EHNQTHKECPGLLPVMGCHLCNSACDEDRVSWEAEIQRGLPTCVPVD*GVDIYNIYLHHY 2390
Query: 230 NPNSDPWHDGAGHICLHPCFHAHWMGFXXDXXSDPXCDPQDWALGLDQGSCPGLRDPDGT 409
N +S+P +D GH+CLH C HA+W+G S + +G+DQG+C G+ D G
Sbjct: 2391 NLDSNPSYDSPGHLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DHHGA 2570
Query: 410 SPVHAHRLPRLXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQERXXXXEQRI 565
+H R+PRL V + +PDQ+A+QPG+QQ SADL QER EQ +
Sbjct: 2571 PALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 2726
Score = 146 bits (313), Expect(2) = 3e-040
Identities = 62/118 (52%), Positives = 82/118 (69%)
Frame = -1 / -1
Query: 404 HQDLVAPGKSLDRAPEPSLVDHRXDRXXXXXQTPSSGHESKDANKYVQHRHARDRY*DYH 225
H DL++P K LDR+P+P ++ D QTP+S HE K+ANK V H RD Y DY+
Sbjct: 2565 HDDLISPRKRLDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKDVLDCHMRDCYQDYN 2386
Query: 224 DGCKCYKYQTLDQPEH*LELCTEPSPAH*YGLHNEQNHKNYNP*EAINQHTLVVLSYL 51
DG KCYKYQ L+QPEH LE+ E P +*+GLH++QN+K+ NP*+AI+Q TL V Y+
Sbjct: 2385 DGDKCYKYQPLNQPEHKLEVRAEFPPPN*HGLHHKQNYKDDNP*QAIDQDTLCVFGYV 2212
Score = 43.2 bits (88), Expect(2) = 3e-040
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSG 463
CS L LSC + RSAD C* PG* A WSG
Sbjct: 2719 CSV*LGLSCGRQGFARSADLC*RPG*RAFWSG 2624
>ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5910
Score = 320 bits (694), Expect = 8e-086
Identities = 142/179 (79%), Positives = 151/179 (84%)
Frame = +3 / +1
Query: 30 YHLNITKKITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFI 209
Y L ITK +SVLVYC SWVVIFVILLVMKTVSVGRR+FSA+FQLVFRLIKGLIFI
Sbjct: 5374 YGLVYHLNITKHTKSVLVYCLSWVVIFVILLVMKTVSVGRRKFSADFQLVFRLIKGLIFI 5553
Query: 210 TFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARG 389
TF +I++ILIAIP MTV DIFVCILAFMPTGWGL AI+PVI + GLWGSIKALARG
Sbjct: 5554 TFISIIIILIAIPHMTVQDIFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARG 5733
Query: 390 YEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
YEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GLQISRI GHKKD T NKE*
Sbjct: 5734 YEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 5910
Score = 246 bits (532), Expect = 2e-063
Identities = 110/172 (63%), Positives = 125/172 (72%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 5909 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 5730
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
ALI+P +P+ ITG IA +P PVGMKARMQT MS TV+ GIAI+I M +NVI
Sbjct: 5729 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVI 5550
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTLWLSLVIF 50
NI PLINRNTSW SALN LPTDTVFITS+ITK+TTH++Q*T TL++ LV+F
Sbjct: 5549 NINPLINRNTSWKSALNFRLPTDTVFITSRITKMTTHDRQ*TRTLFVCLVMF 5394
Score = 181 bits (390), Expect = 7e-044
Identities = 77/172 (44%), Positives = 104/172 (60%)
Frame = +2 / +3
Query: 50 EDN*GQPECAGLLLLMGCNFCDFARYEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRG 229
E N EC GLL +MGC+ C+ A EDR+S + ++Q +P VPVD G DIYNIY H
Sbjct: 5394 EHNQTHKECPGLLPVMGCHLCNSACDEDRVSWEAEIQRGLPTCVPVD*GVDIYNIYLHHY 5573
Query: 230 NPNSDPWHDGAGHICLHPCFHAHWMGFXXDXXSDPXCDPQDWALGLDQGSCPGLRDPDGT 409
N +S+P +D GH+CLH C HA+W+G S + +G+DQG+C G+ D G
Sbjct: 5574 NLDSNPSYDSPGHLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DHHGA 5753
Query: 410 SPVHAHRLPRLXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQERXXXXEQRI 565
+H R+PRL V + +PDQ+A+QPG+QQ SADL QER EQ +
Sbjct: 5754 PALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 5909
Score = 146 bits (313), Expect(2) = 3e-040
Identities = 62/118 (52%), Positives = 82/118 (69%)
Frame = -1 / -1
Query: 404 HQDLVAPGKSLDRAPEPSLVDHRXDRXXXXXQTPSSGHESKDANKYVQHRHARDRY*DYH 225
H DL++P K LDR+P+P ++ D QTP+S HE K+ANK V H RD Y DY+
Sbjct: 5748 HDDLISPRKRLDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKDVLDCHMRDCYQDYN 5569
Query: 224 DGCKCYKYQTLDQPEH*LELCTEPSPAH*YGLHNEQNHKNYNP*EAINQHTLVVLSYL 51
DG KCYKYQ L+QPEH LE+ E P +*+GLH++QN+K+ NP*+AI+Q TL V Y+
Sbjct: 5568 DGDKCYKYQPLNQPEHKLEVRAEFPPPN*HGLHHKQNYKDDNP*QAIDQDTLCVFGYV 5395
Score = 43.2 bits (88), Expect(2) = 3e-040
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSG 463
CS L LSC + RSAD C* PG* A WSG
Sbjct: 5902 CSV*LGLSCGRQGFARSADLC*RPG*RAFWSG 5807
>dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F07, full
insert sequence
Length = 1292
Score = 319 bits (690), Expect = 3e-085
Identities = 141/179 (78%), Positives = 150/179 (83%)
Frame = +3 / +2
Query: 30 YHLNITKKITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFI 209
Y L ITK +SVLVYC SWVVIFVILLVMKTVSVGRR+FSA+FQLVFRLIKGLIFI
Sbjct: 401 YGLVYHLNITKHTKSVLVYCLSWVVIFVILLVMKTVSVGRRKFSADFQLVFRLIKGLIFI 580
Query: 210 TFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARG 389
TF +I++ILI IP MTV DIFVCILAFMPTGWGL AI+PVI + GLWGSIKALARG
Sbjct: 581 TFISIIIILITIPHMTVQDIFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARG 760
Query: 390 YEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
YEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GLQISRI GHKKD T NKE*
Sbjct: 761 YEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 937
Score = 244 bits (528), Expect = 6e-063
Identities = 109/172 (63%), Positives = 124/172 (72%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 936 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 757
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
ALI+P +P+ ITG IA +P PVGMKARMQT MS TV+ GI I+I M +NVI
Sbjct: 756 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKMSWTVI*GIVIKIIMMEINVI 577
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTLWLSLVIF 50
NI PLINRNTSW SALN LPTDTVFITS+ITK+TTH++Q*T TL++ LV+F
Sbjct: 576 NINPLINRNTSWKSALNFRLPTDTVFITSRITKMTTHDRQ*TRTLFVCLVMF 421
Score = 180 bits (387), Expect = 2e-043
Identities = 76/172 (44%), Positives = 104/172 (60%)
Frame = +2 / +1
Query: 50 EDN*GQPECAGLLLLMGCNFCDFARYEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRG 229
E N EC GLL +MGC+ C+ A EDR+S + ++Q +P VPVD G DIYNIY H
Sbjct: 421 EHNQTHKECPGLLPVMGCHLCNSACDEDRVSWEAEIQRGLPTCVPVD*GVDIYNIYLHHY 600
Query: 230 NPNSDPWHDGAGHICLHPCFHAHWMGFXXDXXSDPXCDPQDWALGLDQGSCPGLRDPDGT 409
N +++P +D GH+CLH C HA+W+G S + +G+DQG+C G+ D G
Sbjct: 601 NLDNNPSYDSPGHLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DHHGA 780
Query: 410 SPVHAHRLPRLXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQERXXXXEQRI 565
+H R+PRL V + +PDQ+A+QPG+QQ SADL QER EQ +
Sbjct: 781 PALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 936
Score = 146 bits (313), Expect(2) = 3e-040
Identities = 62/118 (52%), Positives = 82/118 (69%)
Frame = -1 / -2
Query: 404 HQDLVAPGKSLDRAPEPSLVDHRXDRXXXXXQTPSSGHESKDANKYVQHRHARDRY*DYH 225
H DL++P K LDR+P+P ++ D QTP+S HE K+ANK V H RD Y DY+
Sbjct: 775 HDDLISPRKRLDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKDVLDCHMRDCYQDYN 596
Query: 224 DGCKCYKYQTLDQPEH*LELCTEPSPAH*YGLHNEQNHKNYNP*EAINQHTLVVLSYL 51
DG KCYKYQ L+QPEH LE+ E P +*+GLH++QN+K+ NP*+AI+Q TL V Y+
Sbjct: 595 DGDKCYKYQPLNQPEHKLEVRAEFPPPN*HGLHHKQNYKDDNP*QAIDQDTLCVFGYV 422
Score = 43.2 bits (88), Expect(2) = 3e-040
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSG 463
CS L LSC + RSAD C* PG* A WSG
Sbjct: 929 CSV*LGLSCGRQGFARSADLC*RPG*RAFWSG 834
>gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014975, whole
genome shotgun sequence
Length = 9397
Score = 148 bits (318), Expect(4) = 5e-075
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / +1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+P + GLWGSIKALARGYEILMGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 5077 AIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 5256
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 5257 QISRILGGHKKDRSTRNKE* 5316
Score = 133 bits (286), Expect(4) = 5e-075
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +3 / +2
Query: 129 KTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWG 308
+TVSVGRRRFSAEFQLVFRLIKGLIFITF AIVVILIAIP MTVLDIFVCILAFMPTGWG
Sbjct: 4781 QTVSVGRRRFSAEFQLVFRLIKGLIFITFVAIVVILIAIPHMTVLDIFVCILAFMPTGWG 4960
Query: 309 L 311
L
Sbjct: 4961 L 4963
Score = 119 bits (255), Expect(4) = 1e-057
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / -2
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
KPHPVGMKARMQT +S TVM G+AI ITTMA NV+NIRPLINR TSWNSALNLLLPT+TV
Sbjct: 4962 KPHPVGMKARMQTKISRTVM*GMAINITTMATNVMNIRPLINRKTSWNSALNLLLPTETV 4783
Query: 130 F 128
+
Sbjct: 4782 W 4780
Score = 113 bits (241), Expect(4) = 1e-057
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFLCP IREICRPLL AWL SILVWNSDT QAR AMGVN
Sbjct: 5315 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 5136
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
ALI+PQSP+ W G +A I
Sbjct: 5135 RARALIDPQSPIAWTAGLMACAI 5067
Score = 112 bits (240), Expect(3) = 5e-041
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +2 / +3
Query: 317 DXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQ 496
D S C P WALG++QGSCPGL DP+GT +H H +P L RV +PDQDA+QPG+Q
Sbjct: 5067 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 5246
Query: 497 QXSADLPYXXXTQERXXXXEQRI 565
Q SADLPY QER EQ +
Sbjct: 5247 QRSADLPYPWRAQERPINPEQGV 5315
Score = 84.0 bits (177), Expect(3) = 2e-032
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = -3 / -1
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSGIPXXXXXXXXXRWA*TGEVPSGSRSPGQ 379
CS + LSC YGRSAD C* PG* ASWSG W * VP GS SPGQ
Sbjct: 5308 CSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITGVPLGSHSPGQ 5129
Query: 378 EP*SSPRAQSCGSQ 337
EP* P+AQ G Q
Sbjct: 5128 EP*LIPKAQ*PGQQ 5087
Score = 79.0 bits (166), Expect(3) = 5e-041
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +2 / +1
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
+ D S E+VQC VPA +PVDQG I+NI H + N P HD + ++ LHPCFHA+WM
Sbjct: 4777 FPDCFSR*EEVQCGVPACLPVDQGPYIHNICRHCCDINCHPSHDSS*YLRLHPCFHANWM 4956
Query: 305 G 307
G
Sbjct: 4957 G 4959
Score = 78.0 bits (164), Expect(3) = 2e-032
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -1 / -1
Query: 311 QTPSSGHESKDANKYVQHRHARDRY*DYHDGCKCYKYQTLDQPEH*LELCTEPSPAH*YG 132
Q PSS HESKDAN+ +++ H RD * +++G KCY+Y+ LDQPE LEL TEP P *
Sbjct: 4963 QAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKCYEYKALDQPEDKLELRTEPPPTD*NS 4784
Query: 131 LHNE 120
L +
Sbjct: 4783 LERK 4772
Score = 44.1 bits (90), Expect(4) = 5e-075
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / +1
Query: 81 VYCFSWVVIFVILLVMKTVS 140
VYCFSWVVIFVILLVMK +
Sbjct: 4585 VYCFSWVVIFVILLVMKVTT 4644
Score = 39.6 bits (80), Expect(4) = 1e-057
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -3
Query: 130 FITSKITKITTHEKQ*TSTL 71
F+TSKITKITTHEKQ*T L
Sbjct: 4634 FMTSKITKITTHEKQ*TCKL 4575
Score = 30.9 bits (61), Expect(4) = 5e-075
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 15 RYGLVYHLNITK 50
+YGLVYHLNITK
Sbjct: 4445 QYGLVYHLNITK 4480
Score = 29.9 bits (59), Expect(3) = 2e-032
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 129 S*RAKSQKLQPMRSNKPAH 73
S*+ K +K QPM+SNKPA+
Sbjct: 4633 S*QVKLRKSQPMKSNKPAN 4577
Score = 29.0 bits (57), Expect(3) = 5e-041
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 77 AGLLLLMGCNFCDFARYE 130
AGLLL MGC+F +F +E
Sbjct: 4581 AGLLLFMGCDFRNFTCHE 4634
Score = 26.3 bits (51), Expect(4) = 1e-057
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 91 KQ*TSTLWLSLVIFFVIFR*YTSPY 17
K+ L +L + VIF+*YTSPY
Sbjct: 4521 KENKGQLTSTLRVCLVIFK*YTSPY 4447
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0069C14
Length = 150579
Score = 148 bits (318), Expect(4) = 2e-071
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+P + GLWGSIKALARGYEILMGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 16642 AIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 16463
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 16462 QISRILGGHKKDRSTRNKE* 16403
Score = 133 bits (286), Expect(4) = 2e-071
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +3 / -1
Query: 129 KTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWG 308
+TVSVGRRRFSAEFQLVFRLIKGLIFITF AIVVILIAIP MTVLDIFVCILAFMPTGWG
Sbjct: 16938 QTVSVGRRRFSAEFQLVFRLIKGLIFITFVAIVVILIAIPHMTVLDIFVCILAFMPTGWG 16759
Query: 309 L 311
L
Sbjct: 16758 L 16756
Score = 119 bits (255), Expect(3) = 5e-054
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / +2
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
KPHPVGMKARMQT +S TVM G+AI ITTMA NV+NIRPLINR TSWNSALNLLLPT+TV
Sbjct: 16757 KPHPVGMKARMQTKISRTVM*GMAINITTMATNVMNIRPLINRKTSWNSALNLLLPTETV 16936
Query: 130 F 128
+
Sbjct: 16937 W 16939
Score = 113 bits (241), Expect(3) = 5e-054
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = -2 / +3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFLCP IREICRPLL AWL SILVWNSDT QAR AMGVN
Sbjct: 16404 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 16583
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
ALI+PQSP+ W G +A I
Sbjct: 16584 RARALIDPQSPIAWTAGLMACAI 16652
Score = 112 bits (240), Expect(2) = 6e-041
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +2 / -2
Query: 317 DXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQ 496
D S C P WALG++QGSCPGL DP+GT +H H +P L RV +PDQDA+QPG+Q
Sbjct: 16652 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 16473
Query: 497 QXSADLPYXXXTQERXXXXEQRI 565
Q SADLPY QER EQ +
Sbjct: 16472 QRSADLPYPWRAQERPINPEQGV 16404
Score = 84.0 bits (177), Expect(3) = 3e-030
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = -3 / +1
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSGIPXXXXXXXXXRWA*TGEVPSGSRSPGQ 379
CS + LSC YGRSAD C* PG* ASWSG W * VP GS SPGQ
Sbjct: 16411 CSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITGVPLGSHSPGQ 16590
Query: 378 EP*SSPRAQSCGSQ 337
EP* P+AQ G Q
Sbjct: 16591 EP*LIPKAQ*PGQQ 16632
Score = 79.0 bits (166), Expect(2) = 6e-041
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +2 / -3
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
+ D S E+VQC VPA +PVDQG I+NI H + N P HD + ++ LHPCFHA+WM
Sbjct: 16942 FPDCFSR*EEVQCGVPACLPVDQGPYIHNICRHCCDINCHPSHDSS*YLRLHPCFHANWM 16763
Query: 305 G 307
G
Sbjct: 16762 G 16760
Score = 78.0 bits (164), Expect(3) = 3e-030
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -1 / +1
Query: 311 QTPSSGHESKDANKYVQHRHARDRY*DYHDGCKCYKYQTLDQPEH*LELCTEPSPAH*YG 132
Q PSS HESKDAN+ +++ H RD * +++G KCY+Y+ LDQPE LEL TEP P *
Sbjct: 16756 QAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKCYEYKALDQPEDKLELRTEPPPTD*NS 16935
Query: 131 LHNE 120
L +
Sbjct: 16936 LERK 16947
Score = 44.1 bits (90), Expect(4) = 2e-071
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / -3
Query: 81 VYCFSWVVIFVILLVMKTVS 140
VYCFSWVVIFVILLVMK +
Sbjct: 17134 VYCFSWVVIFVILLVMKVTT 17075
Score = 39.6 bits (80), Expect(3) = 5e-054
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / +3
Query: 130 FITSKITKITTHEKQ*TSTL 71
F+TSKITKITTHEKQ*T L
Sbjct: 17085 FMTSKITKITTHEKQ*TCKL 17144
Score = 30.9 bits (61), Expect(4) = 2e-071
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / -1
Query: 15 RYGLVYHLNITK 50
+YGLVYHLNITK
Sbjct: 17274 QYGLVYHLNITK 17239
Score = 29.9 bits (59), Expect(3) = 3e-030
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3 / +1
Query: 129 S*RAKSQKLQPMRSNKPAH 73
S*+ K +K QPM+SNKPA+
Sbjct: 17086 S*QVKLRKSQPMKSNKPAN 17142
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 148 bits (318), Expect(4) = 2e-071
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+P + GLWGSIKALARGYEILMGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 155440 AIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 155261
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 155260 QISRILGGHKKDRSTRNKE* 155201
Score = 133 bits (286), Expect(4) = 2e-071
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +3 / -3
Query: 129 KTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWG 308
+TVSVGRRRFSAEFQLVFRLIKGLIFITF AIVVILIAIP MTVLDIFVCILAFMPTGWG
Sbjct: 155736 QTVSVGRRRFSAEFQLVFRLIKGLIFITFVAIVVILIAIPHMTVLDIFVCILAFMPTGWG 155557
Query: 309 L 311
L
Sbjct: 155556 L 155554
Score = 119 bits (255), Expect(3) = 6e-054
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / +2
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
KPHPVGMKARMQT +S TVM G+AI ITTMA NV+NIRPLINR TSWNSALNLLLPT+TV
Sbjct: 155555 KPHPVGMKARMQTKISRTVM*GMAINITTMATNVMNIRPLINRKTSWNSALNLLLPTETV 155734
Query: 130 F 128
+
Sbjct: 155735 W 155737
Score = 113 bits (241), Expect(3) = 6e-054
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = -2 / +3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFLCP IREICRPLL AWL SILVWNSDT QAR AMGVN
Sbjct: 155202 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 155381
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
ALI+PQSP+ W G +A I
Sbjct: 155382 RARALIDPQSPIAWTAGLMACAI 155450
Score = 112 bits (240), Expect(2) = 6e-041
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +2 / -1
Query: 317 DXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQ 496
D S C P WALG++QGSCPGL DP+GT +H H +P L RV +PDQDA+QPG+Q
Sbjct: 155450 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 155271
Query: 497 QXSADLPYXXXTQERXXXXEQRI 565
Q SADLPY QER EQ +
Sbjct: 155270 QRSADLPYPWRAQERPINPEQGV 155202
Score = 84.0 bits (177), Expect(3) = 4e-030
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = -3 / +1
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSGIPXXXXXXXXXRWA*TGEVPSGSRSPGQ 379
CS + LSC YGRSAD C* PG* ASWSG W * VP GS SPGQ
Sbjct: 155209 CSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITGVPLGSHSPGQ 155388
Query: 378 EP*SSPRAQSCGSQ 337
EP* P+AQ G Q
Sbjct: 155389 EP*LIPKAQ*PGQQ 155430
Score = 79.0 bits (166), Expect(2) = 6e-041
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +2 / -2
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
+ D S E+VQC VPA +PVDQG I+NI H + N P HD + ++ LHPCFHA+WM
Sbjct: 155740 FPDCFSR*EEVQCGVPACLPVDQGPYIHNICRHCCDINCHPSHDSS*YLRLHPCFHANWM 155561
Query: 305 G 307
G
Sbjct: 155560 G 155558
Score = 78.0 bits (164), Expect(3) = 4e-030
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -1 / +1
Query: 311 QTPSSGHESKDANKYVQHRHARDRY*DYHDGCKCYKYQTLDQPEH*LELCTEPSPAH*YG 132
Q PSS HESKDAN+ +++ H RD * +++G KCY+Y+ LDQPE LEL TEP P *
Sbjct: 155554 QAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKCYEYKALDQPEDKLELRTEPPPTD*NS 155733
Query: 131 LHNE 120
L +
Sbjct: 155734 LERK 155745
Score = 44.1 bits (90), Expect(4) = 2e-071
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / -2
Query: 81 VYCFSWVVIFVILLVMKTVS 140
VYCFSWVVIFVILLVMK +
Sbjct: 155932 VYCFSWVVIFVILLVMKVTT 155873
Score = 39.6 bits (80), Expect(3) = 6e-054
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / +3
Query: 130 FITSKITKITTHEKQ*TSTL 71
F+TSKITKITTHEKQ*T L
Sbjct: 155883 FMTSKITKITTHEKQ*TCKL 155942
Score = 30.9 bits (61), Expect(4) = 2e-071
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / -3
Query: 15 RYGLVYHLNITK 50
+YGLVYHLNITK
Sbjct: 156072 QYGLVYHLNITK 156037
Score = 29.9 bits (59), Expect(3) = 4e-030
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3 / +1
Query: 129 S*RAKSQKLQPMRSNKPAH 73
S*+ K +K QPM+SNKPA+
Sbjct: 155884 S*QVKLRKSQPMKSNKPAN 155940
>gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005686, whole
genome shotgun sequence
Length = 38041
Score = 149 bits (321), Expect(4) = 4e-071
Identities = 66/80 (82%), Positives = 69/80 (86%)
Frame = +3 / +3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 7464 AIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 7643
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 7644 QISRILGGHKKDRATRNKE* 7703
Score = 126 bits (270), Expect(4) = 4e-071
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3 / +3
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++TVSVGRR+FSA+FQLVFRLIKGLIFITF +I++ILIAIP MTV DIFVCILAFMPTGW
Sbjct: 7185 LQTVSVGRRKFSADFQLVFRLIKGLIFITFISIIIILIAIPHMTVQDIFVCILAFMPTGW 7364
Query: 306 GL 311
GL
Sbjct: 7365 GL 7370
Score = 105 bits (224), Expect(3) = 2e-046
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = -2 / -1
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
+P PVGMKARMQT MS TV+ GIAI+I M +NVINI PLINRNTSW SALN LPTDTV
Sbjct: 7369 RPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVININPLINRNTSWKSALNFRLPTDTV 7190
Score = 103 bits (219), Expect(3) = 2e-046
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = -2 / -1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 7702 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 7523
Query: 385 XXXALIEPQSPVLWITGRIA 326
ALI+P +P+ ITG IA
Sbjct: 7522 LASALIDPHNPMRTITGLIA 7463
Score = 87.7 bits (185), Expect(3) = 8e-031
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2 / +2
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
+ DR+S + ++Q +P VPVD G DIYNIY H N +S+P +D GH+CLH C HA+W+
Sbjct: 7184 FADRVSWEAEIQRGLPTCVPVD*GVDIYNIYLHHYNLDSNPSYDSPGHLCLHSCLHANWL 7363
Query: 305 G 307
G
Sbjct: 7364 G 7366
Score = 85.4 bits (180), Expect(3) = 2e-026
Identities = 37/61 (60%), Positives = 44/61 (72%)
Frame = -1 / -3
Query: 311 QTPSSGHESKDANKYVQHRHARDRY*DYHDGCKCYKYQTLDQPEH*LELCTEPSPAH*YG 132
QTP+S HE K+ANK V H RD Y DY+DG KCYKYQ L+QPEH LE+ E P +*+G
Sbjct: 7370 QTPASWHEGKNANKDVLDCHMRDCYQDYNDGDKCYKYQPLNQPEHKLEVRAEFPPPN*HG 7191
Query: 131 L 129
L
Sbjct: 7190 L 7188
Score = 76.7 bits (161), Expect(3) = 8e-031
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2 / +2
Query: 359 LGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQE 538
+G+DQG+C G+ D G +H R+PRL V + +PDQ+A+QPG+QQ SADL QE
Sbjct: 7496 VGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQE 7675
Query: 539 RXXXXEQRI 565
R EQ +
Sbjct: 7676 RPSYTEQGV 7702
Score = 43.2 bits (88), Expect(3) = 2e-026
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -3 / -2
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSG 463
CS L LSC + RSAD C* PG* A WSG
Sbjct: 7695 CSV*LGLSCGRQGFARSADLC*RPG*RAFWSG 7600
Score = 42.8 bits (87), Expect(4) = 4e-071
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / +3
Query: 72 SVLVYCFSWVVIFVILLVMKTV 137
S VYC SWVVIFVILLVMK +
Sbjct: 6843 SFQVYCLSWVVIFVILLVMKVI 6908
Score = 34.5 bits (69), Expect(3) = 2e-046
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = -2 / -1
Query: 130 FITSKITKITTHEKQ*T 80
FITS+ITK+TTH++Q*T
Sbjct: 6901 FITSRITKMTTHDRQ*T 6851
Score = 32.2 bits (64), Expect(3) = 2e-026
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1 / -3
Query: 404 HQDLVAPGKSLDRAPEPSLVDHRXD 330
H DL++P K LDR+P+P ++ D
Sbjct: 7541 HDDLISPRKRLDRSPQPDAHNYWLD 7467
Score = 30.9 bits (61), Expect(4) = 4e-071
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 15 RYGLVYHLNITK 50
+YGLVYHLNITK
Sbjct: 6693 QYGLVYHLNITK 6728
Score = 25.8 bits (50), Expect(3) = 8e-031
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3 / +3
Query: 30 YHLNITKKITKDNQSVLVYCFSWVVIFVILLV 125
Y L ITK +SVLV C+ ++ + LV
Sbjct: 6696 YGLVYHLNITKHTKSVLVICYLHLIFLGVFLV 6791
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 148 bits (318), Expect(4) = 2e-070
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+P + GLWGSIKALARGYEILMGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 155440 AIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 155261
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 155260 QISRILGGHKKDRSTRNKE* 155201
Score = 133 bits (286), Expect(4) = 2e-070
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +3 / -2
Query: 129 KTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWG 308
+TVSVGRRRFSAEFQLVFRLIKGLIFITF AIVVILIAIP MTVLDIFVCILAFMPTGWG
Sbjct: 155736 QTVSVGRRRFSAEFQLVFRLIKGLIFITFVAIVVILIAIPHMTVLDIFVCILAFMPTGWG 155557
Query: 309 L 311
L
Sbjct: 155556 L 155554
Score = 119 bits (255), Expect(3) = 3e-053
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / +2
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
KPHPVGMKARMQT +S TVM G+AI ITTMA NV+NIRPLINR TSWNSALNLLLPT+TV
Sbjct: 155555 KPHPVGMKARMQTKISRTVM*GMAINITTMATNVMNIRPLINRKTSWNSALNLLLPTETV 155734
Query: 130 F 128
+
Sbjct: 155735 W 155737
Score = 113 bits (241), Expect(3) = 3e-053
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = -2 / +3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFLCP IREICRPLL AWL SILVWNSDT QAR AMGVN
Sbjct: 155202 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 155381
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
ALI+PQSP+ W G +A I
Sbjct: 155382 RARALIDPQSPIAWTAGLMACAI 155450
Score = 112 bits (240), Expect(2) = 6e-041
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +2 / -3
Query: 317 DXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQ 496
D S C P WALG++QGSCPGL DP+GT +H H +P L RV +PDQDA+QPG+Q
Sbjct: 155450 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 155271
Query: 497 QXSADLPYXXXTQERXXXXEQRI 565
Q SADLPY QER EQ +
Sbjct: 155270 QRSADLPYPWRAQERPINPEQGV 155202
Score = 84.0 bits (177), Expect(3) = 2e-029
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = -3 / +1
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSGIPXXXXXXXXXRWA*TGEVPSGSRSPGQ 379
CS + LSC YGRSAD C* PG* ASWSG W * VP GS SPGQ
Sbjct: 155209 CSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITGVPLGSHSPGQ 155388
Query: 378 EP*SSPRAQSCGSQ 337
EP* P+AQ G Q
Sbjct: 155389 EP*LIPKAQ*PGQQ 155430
Score = 79.0 bits (166), Expect(2) = 6e-041
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +2 / -1
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
+ D S E+VQC VPA +PVDQG I+NI H + N P HD + ++ LHPCFHA+WM
Sbjct: 155740 FPDCFSR*EEVQCGVPACLPVDQGPYIHNICRHCCDINCHPSHDSS*YLRLHPCFHANWM 155561
Query: 305 G 307
G
Sbjct: 155560 G 155558
Score = 78.0 bits (164), Expect(3) = 2e-029
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -1 / +1
Query: 311 QTPSSGHESKDANKYVQHRHARDRY*DYHDGCKCYKYQTLDQPEH*LELCTEPSPAH*YG 132
Q PSS HESKDAN+ +++ H RD * +++G KCY+Y+ LDQPE LEL TEP P *
Sbjct: 155554 QAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKCYEYKALDQPEDKLELRTEPPPTD*NS 155733
Query: 131 LHNE 120
L +
Sbjct: 155734 LERK 155745
Score = 44.1 bits (90), Expect(4) = 2e-070
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / -1
Query: 81 VYCFSWVVIFVILLVMKTVS 140
VYCFSWVVIFVILLVMK +
Sbjct: 155932 VYCFSWVVIFVILLVMKVTT 155873
Score = 39.6 bits (80), Expect(3) = 3e-053
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / +3
Query: 130 FITSKITKITTHEKQ*TSTL 71
F+TSKITKITTHEKQ*T L
Sbjct: 155883 FMTSKITKITTHEKQ*TCKL 155942
Score = 30.9 bits (61), Expect(4) = 2e-070
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / -2
Query: 15 RYGLVYHLNITK 50
+YGLVYHLNITK
Sbjct: 156072 QYGLVYHLNITK 156037
Score = 29.9 bits (59), Expect(3) = 2e-029
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3 / +1
Query: 129 S*RAKSQKLQPMRSNKPAH 73
S*+ K +K QPM+SNKPA+
Sbjct: 155884 S*QVKLRKSQPMKSNKPAN 155940
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1282_E10
Length = 107284
Score = 149 bits (321), Expect(4) = 9e-070
Identities = 66/80 (82%), Positives = 69/80 (86%)
Frame = +3 / +1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 12940 AIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 13119
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 13120 QISRILGGHKKDRATRNKE* 13179
Score = 126 bits (270), Expect(4) = 9e-070
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3 / +1
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++TVSVGRR+FSA+FQLVFRLIKGLIFITF +I++ILIAIP MTV DIFVCILAFMPTGW
Sbjct: 12661 LQTVSVGRRKFSADFQLVFRLIKGLIFITFISIIIILIAIPHMTVQDIFVCILAFMPTGW 12840
Query: 306 GL 311
GL
Sbjct: 12841 GL 12846
Score = 105 bits (224), Expect(2) = 5e-046
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = -2 / -3
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
+P PVGMKARMQT MS TV+ GIAI+I M +NVINI PLINRNTSW SALN LPTDTV
Sbjct: 12845 RPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVININPLINRNTSWKSALNFRLPTDTV 12666
Score = 103 bits (219), Expect(2) = 5e-046
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 13178 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 12999
Query: 385 XXXALIEPQSPVLWITGRIA 326
ALI+P +P+ ITG IA
Sbjct: 12998 LASALIDPHNPMRTITGLIA 12939
Score = 87.7 bits (185), Expect(2) = 6e-030
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2 / +3
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
+ DR+S + ++Q +P VPVD G DIYNIY H N +S+P +D GH+CLH C HA+W+
Sbjct: 12660 FADRVSWEAEIQRGLPTCVPVD*GVDIYNIYLHHYNLDSNPSYDSPGHLCLHSCLHANWL 12839
Query: 305 G 307
G
Sbjct: 12840 G 12842
Score = 85.4 bits (180), Expect(3) = 2e-026
Identities = 37/61 (60%), Positives = 44/61 (72%)
Frame = -1 / -2
Query: 311 QTPSSGHESKDANKYVQHRHARDRY*DYHDGCKCYKYQTLDQPEH*LELCTEPSPAH*YG 132
QTP+S HE K+ANK V H RD Y DY+DG KCYKYQ L+QPEH LE+ E P +*+G
Sbjct: 12846 QTPASWHEGKNANKDVLDCHMRDCYQDYNDGDKCYKYQPLNQPEHKLEVRAEFPPPN*HG 12667
Query: 131 L 129
L
Sbjct: 12666 L 12664
Score = 76.7 bits (161), Expect(2) = 6e-030
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2 / +3
Query: 359 LGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQE 538
+G+DQG+C G+ D G +H R+PRL V + +PDQ+A+QPG+QQ SADL QE
Sbjct: 12972 VGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQE 13151
Query: 539 RXXXXEQRI 565
R EQ +
Sbjct: 13152 RPSYTEQGV 13178
Score = 43.2 bits (88), Expect(3) = 2e-026
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSG 463
CS L LSC + RSAD C* PG* A WSG
Sbjct: 13171 CSV*LGLSCGRQGFARSADLC*RPG*RAFWSG 13076
Score = 42.8 bits (87), Expect(4) = 9e-070
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / +1
Query: 72 SVLVYCFSWVVIFVILLVMKTV 137
S VYC SWVVIFVILLVMK +
Sbjct: 12319 SFQVYCLSWVVIFVILLVMKVI 12384
Score = 32.2 bits (64), Expect(3) = 2e-026
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1 / -2
Query: 404 HQDLVAPGKSLDRAPEPSLVDHRXD 330
H DL++P K LDR+P+P ++ D
Sbjct: 13017 HDDLISPRKRLDRSPQPDAHNYWLD 12943
Score = 30.9 bits (61), Expect(4) = 9e-070
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITK 50
+YGLVYHLNITK
Sbjct: 12169 QYGLVYHLNITK 12204
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1149_C12
Length = 120743
Score = 149 bits (321), Expect(4) = 1e-069
Identities = 66/80 (82%), Positives = 69/80 (86%)
Frame = +3 / +1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 93109 AIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 93288
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 93289 QISRILGGHKKDRATRNKE* 93348
Score = 126 bits (270), Expect(4) = 1e-069
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3 / +1
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++TVSVGRR+FSA+FQLVFRLIKGLIFITF +I++ILIAIP MTV DIFVCILAFMPTGW
Sbjct: 92830 LQTVSVGRRKFSADFQLVFRLIKGLIFITFISIIIILIAIPHMTVQDIFVCILAFMPTGW 93009
Query: 306 GL 311
GL
Sbjct: 93010 GL 93015
Score = 105 bits (224), Expect(2) = 5e-046
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = -2 / -1
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
+P PVGMKARMQT MS TV+ GIAI+I M +NVINI PLINRNTSW SALN LPTDTV
Sbjct: 93014 RPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVININPLINRNTSWKSALNFRLPTDTV 92835
Score = 103 bits (219), Expect(2) = 5e-046
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = -2 / -1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 93347 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 93168
Query: 385 XXXALIEPQSPVLWITGRIA 326
ALI+P +P+ ITG IA
Sbjct: 93167 LASALIDPHNPMRTITGLIA 93108
Score = 87.7 bits (185), Expect(2) = 6e-030
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2 / +3
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
+ DR+S + ++Q +P VPVD G DIYNIY H N +S+P +D GH+CLH C HA+W+
Sbjct: 92829 FADRVSWEAEIQRGLPTCVPVD*GVDIYNIYLHHYNLDSNPSYDSPGHLCLHSCLHANWL 93008
Query: 305 G 307
G
Sbjct: 93009 G 93011
Score = 85.4 bits (180), Expect(3) = 2e-026
Identities = 37/61 (60%), Positives = 44/61 (72%)
Frame = -1 / -3
Query: 311 QTPSSGHESKDANKYVQHRHARDRY*DYHDGCKCYKYQTLDQPEH*LELCTEPSPAH*YG 132
QTP+S HE K+ANK V H RD Y DY+DG KCYKYQ L+QPEH LE+ E P +*+G
Sbjct: 93015 QTPASWHEGKNANKDVLDCHMRDCYQDYNDGDKCYKYQPLNQPEHKLEVRAEFPPPN*HG 92836
Query: 131 L 129
L
Sbjct: 92835 L 92833
Score = 76.7 bits (161), Expect(2) = 6e-030
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2 / +3
Query: 359 LGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQE 538
+G+DQG+C G+ D G +H R+PRL V + +PDQ+A+QPG+QQ SADL QE
Sbjct: 93141 VGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQE 93320
Query: 539 RXXXXEQRI 565
R EQ +
Sbjct: 93321 RPSYTEQGV 93347
Score = 43.2 bits (88), Expect(3) = 2e-026
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -3 / -2
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSG 463
CS L LSC + RSAD C* PG* A WSG
Sbjct: 93340 CSV*LGLSCGRQGFARSADLC*RPG*RAFWSG 93245
Score = 42.8 bits (87), Expect(4) = 1e-069
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / +1
Query: 72 SVLVYCFSWVVIFVILLVMKTV 137
S VYC SWVVIFVILLVMK +
Sbjct: 92488 SFQVYCLSWVVIFVILLVMKVI 92553
Score = 32.2 bits (64), Expect(3) = 2e-026
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1 / -3
Query: 404 HQDLVAPGKSLDRAPEPSLVDHRXD 330
H DL++P K LDR+P+P ++ D
Sbjct: 93186 HDDLISPRKRLDRSPQPDAHNYWLD 93112
Score = 30.9 bits (61), Expect(4) = 1e-069
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITK 50
+YGLVYHLNITK
Sbjct: 92338 QYGLVYHLNITK 92373
>ref|NM_187591.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 4929
Score = 255 bits (552), Expect(2) = 1e-068
Identities = 106/159 (66%), Positives = 130/159 (81%)
Frame = +3 / +1
Query: 66 NQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
++S+LVY SW+VI V+LLVMKTVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI
Sbjct: 4423 DKSILVYLISWLVILVVLLVMKTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAI 4602
Query: 246 PGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 425
MT+ DIFVC LAF+P+GWG+ A +P+ + GLWGS++ALAR YEI+MG+LLFTP
Sbjct: 4603 LHMTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTP 4782
Query: 426 IAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKD 542
I LA FVSEFQTRMLFNQAFS GLQISRI G KK+
Sbjct: 4783 ITILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKE 4899
Score = 140 bits (301), Expect = 1e-031
Identities = 77/157 (49%), Positives = 86/157 (54%)
Frame = -2 / -2
Query: 541 SFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXXXXXALIEP 362
SF P IREIC PLLNA LNSI V NSDT A+ +GV A +P
Sbjct: 4898 SFF*PPRIREICSPLLNA*LNSIRV*NSDTKGNHAKIVIGVKRRTPIIISYARARARTDP 4719
Query: 361 QSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINR 182
SP G A I PHP G AR TN+S V+ IAI MA+N NI LI R
Sbjct: 4718 HSPARRARGLQACAISNIPHPEGKNARKHTNISRKVI*SIAISTIKMAMNETNIINLIRR 4539
Query: 181 NTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
S SALNL LPTDTVFITS TKIT+HE + T+ L
Sbjct: 4538 KNS*KSALNLRLPTDTVFITSNTTKITSHEIKYTNIL 4428
Score = 28.6 bits (56), Expect(2) = 1e-068
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 15 RYGLVYHLNIT 47
+YGLVYHLNIT
Sbjct: 4387 QYGLVYHLNIT 4419
>dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C02, full
insert sequence
Length = 2219
Score = 255 bits (552), Expect(2) = 1e-068
Identities = 106/159 (66%), Positives = 130/159 (81%)
Frame = +3 / +2
Query: 66 NQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
++S+LVY SW+VI V+LLVMKTVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI
Sbjct: 1376 DKSILVYLISWLVILVVLLVMKTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAI 1555
Query: 246 PGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 425
MT+ DIFVC LAF+P+GWG+ A +P+ + GLWGS++ALAR YEI+MG+LLFTP
Sbjct: 1556 LHMTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTP 1735
Query: 426 IAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKD 542
I LA FVSEFQTRMLFNQAFS GLQISRI G KK+
Sbjct: 1736 ITILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKE 1852
Score = 140 bits (301), Expect = 1e-031
Identities = 77/157 (49%), Positives = 86/157 (54%)
Frame = -2 / -3
Query: 541 SFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXXXXXALIEP 362
SF P IREIC PLLNA LNSI V NSDT A+ +GV A +P
Sbjct: 1851 SFF*PPRIREICSPLLNA*LNSIRV*NSDTKGNHAKIVIGVKRRTPIIISYARARARTDP 1672
Query: 361 QSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINR 182
SP G A I PHP G AR TN+S V+ IAI MA+N NI LI R
Sbjct: 1671 HSPARRARGLQACAISNIPHPEGKNARKHTNISRKVI*SIAISTIKMAMNETNIINLIRR 1492
Query: 181 NTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
S SALNL LPTDTVFITS TKIT+HE + T+ L
Sbjct: 1491 KNS*KSALNLRLPTDTVFITSNTTKITSHEIKYTNIL 1381
Score = 28.6 bits (56), Expect(2) = 1e-068
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 15 RYGLVYHLNIT 47
+YGLVYHLNIT
Sbjct: 1340 QYGLVYHLNIT 1372
>dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-G07, full
insert sequence
Length = 1992
Score = 255 bits (552), Expect(2) = 1e-068
Identities = 106/159 (66%), Positives = 130/159 (81%)
Frame = +3 / +3
Query: 66 NQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
++S+LVY SW+VI V+LLVMKTVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI
Sbjct: 1077 DKSILVYLISWLVILVVLLVMKTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAI 1256
Query: 246 PGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 425
MT+ DIFVC LAF+P+GWG+ A +P+ + GLWGS++ALAR YEI+MG+LLFTP
Sbjct: 1257 LHMTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTP 1436
Query: 426 IAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKD 542
I LA FVSEFQTRMLFNQAFS GLQISRI G KK+
Sbjct: 1437 ITILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKE 1553
Score = 140 bits (301), Expect = 1e-031
Identities = 77/157 (49%), Positives = 86/157 (54%)
Frame = -2 / -3
Query: 541 SFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXXXXXALIEP 362
SF P IREIC PLLNA LNSI V NSDT A+ +GV A +P
Sbjct: 1552 SFF*PPRIREICSPLLNA*LNSIRV*NSDTKGNHAKIVIGVKRRTPIIISYARARARTDP 1373
Query: 361 QSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINR 182
SP G A I PHP G AR TN+S V+ IAI MA+N NI LI R
Sbjct: 1372 HSPARRARGLQACAISNIPHPEGKNARKHTNISRKVI*SIAISTIKMAMNETNIINLIRR 1193
Query: 181 NTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
S SALNL LPTDTVFITS TKIT+HE + T+ L
Sbjct: 1192 KNS*KSALNLRLPTDTVFITSNTTKITSHEIKYTNIL 1082
Score = 28.6 bits (56), Expect(2) = 1e-068
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 15 RYGLVYHLNIT 47
+YGLVYHLNIT
Sbjct: 1041 QYGLVYHLNIT 1073
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 148 bits (318), Expect(2) = 5e-068
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+P + GLWGSIKALARGYEILMGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 30518079 AIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 30517900
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 30517899 QISRILGGHKKDRSTRNKE* 30517840
Score = 133 bits (286), Expect(2) = 5e-068
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +3 / -2
Query: 129 KTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWG 308
+TVSVGRRRFSAEFQLVFRLIKGLIFITF AIVVILIAIP MTVLDIFVCILAFMPTGWG
Sbjct: 30518375 QTVSVGRRRFSAEFQLVFRLIKGLIFITFVAIVVILIAIPHMTVLDIFVCILAFMPTGWG 30518196
Query: 309 L 311
L
Sbjct: 30518195 L 30518193
Score = 119 bits (255), Expect(2) = 3e-053
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / +1
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
KPHPVGMKARMQT +S TVM G+AI ITTMA NV+NIRPLINR TSWNSALNLLLPT+TV
Sbjct: 30518194 KPHPVGMKARMQTKISRTVM*GMAINITTMATNVMNIRPLINRKTSWNSALNLLLPTETV 30518373
Query: 130 F 128
+
Sbjct: 30518374 W 30518376
Score = 117 bits (251), Expect = 1e-024
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = +3 / -2
Query: 309 LXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQ 488
L A +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LA FVSEFQTR+LFNQ
Sbjct: 4078172 LSQISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQ 4077993
Query: 489 AFSXGLQISRIXXGHKK 539
AFS GLQISRI G KK
Sbjct: 4077992 AFSRGLQISRILAGGKK 4077942
Score = 113 bits (241), Expect(2) = 3e-053
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = -2 / +2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFLCP IREICRPLL AWL SILVWNSDT QAR AMGVN
Sbjct: 30517841 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 30518020
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
ALI+PQSP+ W G +A I
Sbjct: 30518021 RARALIDPQSPIAWTAGLMACAI 30518089
Score = 112 bits (240), Expect = 3e-023
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +2 / -3
Query: 317 DXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQ 496
D S C P WALG++QGSCPGL DP+GT +H H +P L RV +PDQDA+QPG+Q
Sbjct: 30518089 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 30517910
Query: 497 QXSADLPYXXXTQERXXXXEQRI 565
Q SADLPY QER EQ +
Sbjct: 30517909 QRSADLPYPWRAQERPINPEQGV 30517841
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 148 bits (318), Expect(2) = 5e-068
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+P + GLWGSIKALARGYEILMGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 29548835 AIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 29548656
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 29548655 QISRILGGHKKDRSTRNKE* 29548596
Score = 133 bits (286), Expect(2) = 5e-068
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +3 / -1
Query: 129 KTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWG 308
+TVSVGRRRFSAEFQLVFRLIKGLIFITF AIVVILIAIP MTVLDIFVCILAFMPTGWG
Sbjct: 29549131 QTVSVGRRRFSAEFQLVFRLIKGLIFITFVAIVVILIAIPHMTVLDIFVCILAFMPTGWG 29548952
Query: 309 L 311
L
Sbjct: 29548951 L 29548949
Score = 119 bits (255), Expect(2) = 3e-053
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / +3
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
KPHPVGMKARMQT +S TVM G+AI ITTMA NV+NIRPLINR TSWNSALNLLLPT+TV
Sbjct: 29548950 KPHPVGMKARMQTKISRTVM*GMAINITTMATNVMNIRPLINRKTSWNSALNLLLPTETV 29549129
Query: 130 F 128
+
Sbjct: 29549130 W 29549132
Score = 117 bits (251), Expect = 1e-024
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = +3 / -2
Query: 309 LXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQ 488
L A +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LA FVSEFQTR+LFNQ
Sbjct: 3910824 LSQISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQ 3910645
Query: 489 AFSXGLQISRIXXGHKK 539
AFS GLQISRI G KK
Sbjct: 3910644 AFSRGLQISRILAGGKK 3910594
Score = 113 bits (241), Expect(2) = 3e-053
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFLCP IREICRPLL AWL SILVWNSDT QAR AMGVN
Sbjct: 29548597 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 29548776
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
ALI+PQSP+ W G +A I
Sbjct: 29548777 RARALIDPQSPIAWTAGLMACAI 29548845
Score = 112 bits (240), Expect = 3e-023
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +2 / -2
Query: 317 DXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQ 496
D S C P WALG++QGSCPGL DP+GT +H H +P L RV +PDQDA+QPG+Q
Sbjct: 29548845 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 29548666
Query: 497 QXSADLPYXXXTQERXXXXEQRI 565
Q SADLPY QER EQ +
Sbjct: 29548665 QRSADLPYPWRAQERPINPEQGV 29548597
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 148 bits (318), Expect(2) = 5e-068
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+P + GLWGSIKALARGYEILMGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 11850098 AIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 11849919
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 11849918 QISRILGGHKKDRSTRNKE* 11849859
Score = 133 bits (286), Expect(2) = 5e-068
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +3 / -2
Query: 129 KTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWG 308
+TVSVGRRRFSAEFQLVFRLIKGLIFITF AIVVILIAIP MTVLDIFVCILAFMPTGWG
Sbjct: 11850394 QTVSVGRRRFSAEFQLVFRLIKGLIFITFVAIVVILIAIPHMTVLDIFVCILAFMPTGWG 11850215
Query: 309 L 311
L
Sbjct: 11850214 L 11850212
Score = 119 bits (255), Expect(2) = 3e-053
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / +3
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
KPHPVGMKARMQT +S TVM G+AI ITTMA NV+NIRPLINR TSWNSALNLLLPT+TV
Sbjct: 11850213 KPHPVGMKARMQTKISRTVM*GMAINITTMATNVMNIRPLINRKTSWNSALNLLLPTETV 11850392
Query: 130 F 128
+
Sbjct: 11850393 W 11850395
Score = 113 bits (241), Expect(2) = 3e-053
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFLCP IREICRPLL AWL SILVWNSDT QAR AMGVN
Sbjct: 11849860 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 11850039
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
ALI+PQSP+ W G +A I
Sbjct: 11850040 RARALIDPQSPIAWTAGLMACAI 11850108
Score = 112 bits (240), Expect(2) = 6e-041
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +2 / -3
Query: 317 DXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQ 496
D S C P WALG++QGSCPGL DP+GT +H H +P L RV +PDQDA+QPG+Q
Sbjct: 11850108 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 11849929
Query: 497 QXSADLPYXXXTQERXXXXEQRI 565
Q SADLPY QER EQ +
Sbjct: 11849928 QRSADLPYPWRAQERPINPEQGV 11849860
Score = 84.0 bits (177), Expect(3) = 2e-029
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = -3 / +2
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSGIPXXXXXXXXXRWA*TGEVPSGSRSPGQ 379
CS + LSC YGRSAD C* PG* ASWSG W * VP GS SPGQ
Sbjct: 11849867 CSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITGVPLGSHSPGQ 11850046
Query: 378 EP*SSPRAQSCGSQ 337
EP* P+AQ G Q
Sbjct: 11850047 EP*LIPKAQ*PGQQ 11850088
Score = 79.0 bits (166), Expect(2) = 6e-041
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +2 / -1
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
+ D S E+VQC VPA +PVDQG I+NI H + N P HD + ++ LHPCFHA+WM
Sbjct: 11850398 FPDCFSR*EEVQCGVPACLPVDQGPYIHNICRHCCDINCHPSHDSS*YLRLHPCFHANWM 11850219
Query: 305 G 307
G
Sbjct: 11850218 G 11850216
Score = 78.0 bits (164), Expect(3) = 2e-029
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -1 / +2
Query: 311 QTPSSGHESKDANKYVQHRHARDRY*DYHDGCKCYKYQTLDQPEH*LELCTEPSPAH*YG 132
Q PSS HESKDAN+ +++ H RD * +++G KCY+Y+ LDQPE LEL TEP P *
Sbjct: 11850212 QAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKCYEYKALDQPEDKLELRTEPPPTD*NS 11850391
Query: 131 LHNE 120
L +
Sbjct: 11850392 LERK 11850403
Score = 39.6 bits (80), Expect(3) = 2e-029
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / +1
Query: 130 FITSKITKITTHEKQ*TSTL 71
F+TSKITKITTHEKQ*T L
Sbjct: 11850541 FMTSKITKITTHEKQ*TCKL 11850600
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 149 bits (321), Expect(2) = 3e-066
Identities = 66/80 (82%), Positives = 69/80 (86%)
Frame = +3 / +1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 35904637 AIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 35904816
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 35904817 QISRILGGHKKDRATRNKE* 35904876
Score = 126 bits (270), Expect(2) = 3e-066
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3 / +1
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++TVSVGRR+FSA+FQLVFRLIKGLIFITF +I++ILIAIP MTV DIFVCILAFMPTGW
Sbjct: 35904358 LQTVSVGRRKFSADFQLVFRLIKGLIFITFISIIIILIAIPHMTVQDIFVCILAFMPTGW 35904537
Query: 306 GL 311
GL
Sbjct: 35904538 GL 35904543
Score = 105 bits (224), Expect(2) = 5e-046
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = -2 / -2
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
+P PVGMKARMQT MS TV+ GIAI+I M +NVINI PLINRNTSW SALN LPTDTV
Sbjct: 35904542 RPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVININPLINRNTSWKSALNFRLPTDTV 35904363
Score = 103 bits (219), Expect(2) = 5e-046
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 35904875 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 35904696
Query: 385 XXXALIEPQSPVLWITGRIA 326
ALI+P +P+ ITG IA
Sbjct: 35904695 LASALIDPHNPMRTITGLIA 35904636
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 149 bits (321), Expect(2) = 3e-066
Identities = 66/80 (82%), Positives = 69/80 (86%)
Frame = +3 / +3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 35822394 AIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 35822573
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 35822574 QISRILGGHKKDRATRNKE* 35822633
Score = 126 bits (270), Expect(2) = 3e-066
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3 / +3
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++TVSVGRR+FSA+FQLVFRLIKGLIFITF +I++ILIAIP MTV DIFVCILAFMPTGW
Sbjct: 35822115 LQTVSVGRRKFSADFQLVFRLIKGLIFITFISIIIILIAIPHMTVQDIFVCILAFMPTGW 35822294
Query: 306 GL 311
GL
Sbjct: 35822295 GL 35822300
Score = 105 bits (224), Expect(2) = 5e-046
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = -2 / -1
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
+P PVGMKARMQT MS TV+ GIAI+I M +NVINI PLINRNTSW SALN LPTDTV
Sbjct: 35822299 RPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVININPLINRNTSWKSALNFRLPTDTV 35822120
Score = 103 bits (219), Expect(2) = 5e-046
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = -2 / -1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 35822632 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 35822453
Query: 385 XXXALIEPQSPVLWITGRIA 326
ALI+P +P+ ITG IA
Sbjct: 35822452 LASALIDPHNPMRTITGLIA 35822393
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 149 bits (321), Expect(2) = 3e-066
Identities = 66/80 (82%), Positives = 69/80 (86%)
Frame = +3 / +2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 22451573 AIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 22451752
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 22451753 QISRILGGHKKDRATRNKE* 22451812
Score = 126 bits (270), Expect(2) = 3e-066
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3 / +2
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++TVSVGRR+FSA+FQLVFRLIKGLIFITF +I++ILIAIP MTV DIFVCILAFMPTGW
Sbjct: 22451294 LQTVSVGRRKFSADFQLVFRLIKGLIFITFISIIIILIAIPHMTVQDIFVCILAFMPTGW 22451473
Query: 306 GL 311
GL
Sbjct: 22451474 GL 22451479
Score = 105 bits (224), Expect(2) = 5e-046
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = -2 / -2
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
+P PVGMKARMQT MS TV+ GIAI+I M +NVINI PLINRNTSW SALN LPTDTV
Sbjct: 22451478 RPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVININPLINRNTSWKSALNFRLPTDTV 22451299
Score = 103 bits (219), Expect(2) = 5e-046
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 22451811 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 22451632
Query: 385 XXXALIEPQSPVLWITGRIA 326
ALI+P +P+ ITG IA
Sbjct: 22451631 LASALIDPHNPMRTITGLIA 22451572
>ref|NT_107182.1| Oryza sativa (japonica cultivar-group)
Length = 1785023
Score = 149 bits (321), Expect(2) = 3e-066
Identities = 66/80 (82%), Positives = 69/80 (86%)
Frame = +3 / +2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
AI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLA FVSEFQTRMLFNQAFS GL
Sbjct: 1657667 AIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 1657846
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GHKKD T NKE*
Sbjct: 1657847 QISRILGGHKKDRATRNKE* 1657906
Score = 126 bits (270), Expect(2) = 3e-066
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3 / +2
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++TVSVGRR+FSA+FQLVFRLIKGLIFITF +I++ILIAIP MTV DIFVCILAFMPTGW
Sbjct: 1657388 LQTVSVGRRKFSADFQLVFRLIKGLIFITFISIIIILIAIPHMTVQDIFVCILAFMPTGW 1657567
Query: 306 GL 311
GL
Sbjct: 1657568 GL 1657573
Score = 105 bits (224), Expect(2) = 5e-046
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = -2 / -3
Query: 310 KPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
+P PVGMKARMQT MS TV+ GIAI+I M +NVINI PLINRNTSW SALN LPTDTV
Sbjct: 1657572 RPQPVGMKARMQTKMSWTVI*GIAIKIIMMEINVININPLINRNTSWKSALNFRLPTDTV 1657393
Score = 103 bits (219), Expect(2) = 5e-046
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF V SFL P IREICRPLL AWL SILVWNSDTN QAR A+GV
Sbjct: 1657905 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 1657726
Query: 385 XXXALIEPQSPVLWITGRIA 326
ALI+P +P+ ITG IA
Sbjct: 1657725 LASALIDPHNPMRTITGLIA 1657666
Score = 87.7 bits (185), Expect(4) = 3e-033
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2 / +1
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
+ DR+S + ++Q +P VPVD G DIYNIY H N +S+P +D GH+CLH C HA+W+
Sbjct: 1657387 FADRVSWEAEIQRGLPTCVPVD*GVDIYNIYLHHYNLDSNPSYDSPGHLCLHSCLHANWL 1657566
Query: 305 G 307
G
Sbjct: 1657567 G 1657569
Score = 85.4 bits (180), Expect(3) = 2e-026
Identities = 37/61 (60%), Positives = 44/61 (72%)
Frame = -1 / -2
Query: 311 QTPSSGHESKDANKYVQHRHARDRY*DYHDGCKCYKYQTLDQPEH*LELCTEPSPAH*YG 132
QTP+S HE K+ANK V H RD Y DY+DG KCYKYQ L+QPEH LE+ E P +*+G
Sbjct: 1657573 QTPASWHEGKNANKDVLDCHMRDCYQDYNDGDKCYKYQPLNQPEHKLEVRAEFPPPN*HG 1657394
Query: 131 L 129
L
Sbjct: 1657393 L 1657391
Score = 76.7 bits (161), Expect(4) = 3e-033
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2 / +1
Query: 359 LGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQE 538
+G+DQG+C G+ D G +H R+PRL V + +PDQ+A+QPG+QQ SADL QE
Sbjct: 1657699 VGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQE 1657878
Query: 539 RXXXXEQRI 565
R EQ +
Sbjct: 1657879 RPSYTEQGV 1657905
Score = 43.2 bits (88), Expect(3) = 2e-026
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 558 CSXXLXLSCVXXXYGRSADXC*TPG*TASWSG 463
CS L LSC + RSAD C* PG* A WSG
Sbjct: 1657898 CSV*LGLSCGRQGFARSADLC*RPG*RAFWSG 1657803
Score = 42.8 bits (87), Expect(4) = 3e-033
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / +2
Query: 72 SVLVYCFSWVVIFVILLVMKTV 137
S VYC SWVVIFVILLVMK +
Sbjct: 1657046 SFQVYCLSWVVIFVILLVMKVI 1657111
Score = 32.2 bits (64), Expect(3) = 2e-026
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1 / -2
Query: 404 HQDLVAPGKSLDRAPEPSLVDHRXD 330
H DL++P K LDR+P+P ++ D
Sbjct: 1657744 HDDLISPRKRLDRSPQPDAHNYWLD 1657670
Score = 30.9 bits (61), Expect(4) = 3e-033
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 15 RYGLVYHLNITK 50
+YGLVYHLNITK
Sbjct: 1656896 QYGLVYHLNITK 1656931
>gb|CB642890.1|CB642890 OSJNEb03E21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03E21 3', mRNA sequence
Length = 769
Score = 255 bits (551), Expect = 4e-066
Identities = 106/158 (67%), Positives = 129/158 (81%)
Frame = +3 / -1
Query: 69 QSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIP 248
+S+LVY SW+VI V+LLVMKTVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI
Sbjct: 769 KSILVYLISWLVILVVLLVMKTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAIL 590
Query: 249 GMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPI 428
MT+ DIFVC LAF+P+GWG+ A +P+ + GLWGS++ALAR YEI+MG+LLFTPI
Sbjct: 589 HMTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPI 410
Query: 429 AFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKD 542
LA FVSEFQTRMLFNQAFS GLQISRI G KK+
Sbjct: 409 TILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKE 296
Score = 140 bits (301), Expect = 1e-031
Identities = 77/157 (49%), Positives = 86/157 (54%)
Frame = -2 / +3
Query: 541 SFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXXXXXALIEP 362
SF P IREIC PLLNA LNSI V NSDT A+ +GV A +P
Sbjct: 297 SFF*PPRIREICSPLLNA*LNSIRV*NSDTKGNHAKIVIGVKRRTPIIISYARARARTDP 476
Query: 361 QSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINR 182
SP G A I PHP G AR TN+S V+ IAI MA+N NI LI R
Sbjct: 477 HSPARRARGLQACAISNIPHPEGKNARKHTNISRKVI*SIAISTIKMAMNETNIINLIRR 656
Query: 181 NTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
S SALNL LPTDTVFITS TKIT+HE + T+ L
Sbjct: 657 KNS*KSALNLRLPTDTVFITSNTTKITSHEIKYTNIL 767
>gb|CB677903.1|CB677903 OSJNEe15F12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15F12 3', mRNA sequence
Length = 804
Score = 255 bits (551), Expect = 4e-066
Identities = 106/158 (67%), Positives = 129/158 (81%)
Frame = +3 / -1
Query: 69 QSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIP 248
+S+LVY SW+VI V+LLVMKTVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI
Sbjct: 804 KSILVYLISWLVILVVLLVMKTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAIL 625
Query: 249 GMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPI 428
MT+ DIFVC LAF+P+GWG+ A +P+ + GLWGS++ALAR YEI+MG+LLFTPI
Sbjct: 624 HMTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPI 445
Query: 429 AFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKD 542
LA FVSEFQTRMLFNQAFS GLQISRI G KK+
Sbjct: 444 TILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKE 331
Score = 140 bits (301), Expect = 1e-031
Identities = 77/157 (49%), Positives = 86/157 (54%)
Frame = -2 / +2
Query: 541 SFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXXXXXALIEP 362
SF P IREIC PLLNA LNSI V NSDT A+ +GV A +P
Sbjct: 332 SFF*PPRIREICSPLLNA*LNSIRV*NSDTKGNHAKIVIGVKRRTPIIISYARARARTDP 511
Query: 361 QSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINR 182
SP G A I PHP G AR TN+S V+ IAI MA+N NI LI R
Sbjct: 512 HSPARRARGLQACAISNIPHPEGKNARKHTNISRKVI*SIAISTIKMAMNETNIINLIRR 691
Query: 181 NTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
S SALNL LPTDTVFITS TKIT+HE + T+ L
Sbjct: 692 KNS*KSALNLRLPTDTVFITSNTTKITSHEIKYTNIL 802
>gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005795, whole
genome shotgun sequence
Length = 23395
Score = 120 bits (257), Expect(3) = 2e-055
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / +1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 21358 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 21537
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 21538 QISRILGGQKKE 21573
Score = 106 bits (226), Expect(3) = 2e-055
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / +3
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 21066 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 21245
Query: 297 TGWGL 311
+GWG+
Sbjct: 21246 SGWGI 21260
Score = 32.2 bits (64), Expect(3) = 2e-055
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / +1
Query: 72 SVLVYCFSWVVIFVILLVMK 131
S VY SW+VI V+LLVMK
Sbjct: 20884 SFQVYLISWLVILVVLLVMK 20943
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 120 bits (257), Expect(2) = 2e-051
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / -2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 1760931 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 1760752
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 1760751 QISRILGGQKKE 1760716
Score = 106 bits (226), Expect(2) = 2e-051
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / -1
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 1761223 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 1761044
Query: 297 TGWGL 311
+GWG+
Sbjct: 1761043 SGWGI 1761029
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 120 bits (257), Expect(2) = 2e-051
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 1562513 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 1562334
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 1562333 QISRILGGQKKE 1562298
Score = 106 bits (226), Expect(2) = 2e-051
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / -2
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 1562805 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 1562626
Query: 297 TGWGL 311
+GWG+
Sbjct: 1562625 SGWGI 1562611
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 120 bits (257), Expect(2) = 2e-051
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / -2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 1562515 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 1562336
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 1562335 QISRILGGQKKE 1562300
Score = 106 bits (226), Expect(2) = 2e-051
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / -1
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 1562807 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 1562628
Query: 297 TGWGL 311
+GWG+
Sbjct: 1562627 SGWGI 1562613
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 120 bits (257), Expect(2) = 2e-051
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 1568569 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 1568390
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 1568389 QISRILGGQKKE 1568354
Score = 106 bits (226), Expect(2) = 2e-051
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / -2
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 1568861 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 1568682
Query: 297 TGWGL 311
+GWG+
Sbjct: 1568681 SGWGI 1568667
Score = 86.8 bits (183), Expect(2) = 1e-021
Identities = 34/69 (49%), Positives = 50/69 (72%)
Frame = +3 / +2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P++ K GLW ++++LAR Y+ G+++F PIA + F+S FQTR+LFNQAFS GL
Sbjct: 1052996 AWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQAFSRGL 1053175
Query: 507 QISRIXXGH 533
+IS I G+
Sbjct: 1053176 EISLILAGN 1053202
Score = 56.5 bits (117), Expect(2) = 1e-021
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3 / +1
Query: 96 WVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFV 275
W++ + + V + FQL RLIK + + A +V+ + ++V D+F
Sbjct: 1052113 WILTCFLYCINLQVFGLNPKAMVHFQLFLRLIKSIALLMVLAGLVVAVVFTSLSVKDVFA 1052292
Query: 276 CILAFMPTGWGL 311
ILAF+PTGWG+
Sbjct: 1052293 AILAFVPTGWGV 1052328
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 120 bits (257), Expect(2) = 2e-051
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / -2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 1562513 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 1562334
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 1562333 QISRILGGQKKE 1562298
Score = 106 bits (226), Expect(2) = 2e-051
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / -1
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 1562805 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 1562626
Query: 297 TGWGL 311
+GWG+
Sbjct: 1562625 SGWGI 1562611
Score = 86.8 bits (183), Expect(2) = 2e-022
Identities = 34/69 (49%), Positives = 50/69 (72%)
Frame = +3 / +3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P++ K GLW ++++LAR Y+ G+++F PIA + F+S FQTR+LFNQAFS GL
Sbjct: 1054818 AWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQAFSRGL 1054997
Query: 507 QISRIXXGH 533
+IS I G+
Sbjct: 1054998 EISLILAGN 1055024
Score = 56.5 bits (117), Expect(2) = 2e-022
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3 / +1
Query: 96 WVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFV 275
W++ + + V + FQL RLIK + + A +V+ + ++V D+F
Sbjct: 1053934 WILTCFLYCINLQVFGLNPKAMVHFQLFLRLIKSIALLMVLAGLVVAVVFTSLSVKDVFA 1054113
Query: 276 CILAFMPTGWGL 311
ILAF+PTGWG+
Sbjct: 1054114 AILAFVPTGWGV 1054149
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
complete sequence
Length = 127098
Score = 120 bits (257), Expect(2) = 2e-051
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 42076 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 41897
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 41896 QISRILGGQKKE 41861
Score = 106 bits (226), Expect(2) = 2e-051
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / -2
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 42368 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 42189
Query: 297 TGWGL 311
+GWG+
Sbjct: 42188 SGWGI 42174
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07,
complete sequence
Length = 117612
Score = 120 bits (257), Expect(2) = 2e-051
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 99688 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 99509
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 99508 QISRILGGQKKE 99473
Score = 106 bits (226), Expect(2) = 2e-051
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / -2
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 99980 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 99801
Query: 297 TGWGL 311
+GWG+
Sbjct: 99800 SGWGI 99786
>dbj|AG210594.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF2001_0_502_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF2001, genomic survey sequence
Length = 599
Score = 120 bits (257), Expect(2) = 2e-051
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / +1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 331 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 510
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 511 QISRILGGQKKE 546
Score = 106 bits (226), Expect(2) = 2e-051
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / +3
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 39 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 218
Query: 297 TGWGL 311
+GWG+
Sbjct: 219 SGWGI 233
>gb|CB662166.1|CB662166 OSJNEd05O23.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O23 5', mRNA sequence
Length = 824
Score = 198 bits (426), Expect(2) = 3e-051
Identities = 79/124 (63%), Positives = 102/124 (82%)
Frame = +3 / +3
Query: 66 NQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
++S+LVY SW+VI V+LLVMKTVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI
Sbjct: 453 DKSILVYLISWLVILVVLLVMKTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAI 632
Query: 246 PGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 425
MT+ DIFVC LAF+P+GWG+ A +P+ + GLWGS++ALAR YEI+MG+LLFTP
Sbjct: 633 LHMTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTP 812
Query: 426 IAFL 437
I L
Sbjct: 813 ITIL 824
Score = 28.6 bits (56), Expect(2) = 3e-051
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 15 RYGLVYHLNIT 47
+YGLVYHLNIT
Sbjct: 417 QYGLVYHLNIT 449
>ref|NM_193203.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1809
Score = 105 bits (224), Expect(3) = 2e-047
Identities = 36/84 (42%), Positives = 62/84 (73%)
Frame = +3 / +1
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
I + ++S+LVY SW+V+ +L+V+K VS+GR++F + QL+FR++KGL+F+ F +++ +
Sbjct: 1165 IARRSKSILVYGLSWLVMLSVLVVLKMVSIGRQKFGTDLQLMFRILKGLLFLGFVSVMAV 1344
Query: 234 LIAIPGMTVLDIFVCILAFMPTGW 305
L + +T+ D+F IL FMPT W
Sbjct: 1345 LFVVCNLTISDVFASILGFMPTDW 1416
Score = 99.1 bits (210), Expect(3) = 2e-047
Identities = 44/70 (62%), Positives = 49/70 (70%)
Frame = +3 / +2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A P++ K LW SI L R YE LMGL+LF PI L+ FVSEFQTR+LFNQAFS GL
Sbjct: 1421 ACSPLVKKAMLWDSIMELGRSYENLMGLVLFLPIGLLSWFPFVSEFQTRLLFNQAFSRGL 1600
Query: 507 QISRIXXGHK 536
QISRI G K
Sbjct: 1601 QISRILAGQK 1630
Score = 27.2 bits (53), Expect(3) = 2e-047
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKK 53
+YG+VYHLNI ++
Sbjct: 1138 QYGIVYHLNIARR 1176
>dbj|AG209376.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE6034_0_502_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE6034, genomic survey sequence
Length = 777
Score = 120 bits (257), Expect(2) = 2e-046
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS GL
Sbjct: 348 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGL 169
Query: 507 QISRIXXGHKKD 542
QISRI G KK+
Sbjct: 168 QISRILGGQKKE 133
Score = 90.0 bits (190), Expect(2) = 2e-046
Identities = 35/53 (66%), Positives = 46/53 (86%)
Frame = +3 / -3
Query: 153 RFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGL 311
RFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P+GWG+
Sbjct: 604 RFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLPSGWGI 446
>ref|NM_193211.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 5634
Score = 107 bits (228), Expect(3) = 9e-046
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +3 / +1
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
I N+S +VY SW+VI ++L+ +K VS+GR +F FQLVFR++KG++FI ++VVI
Sbjct: 5131 IVHGNRSFMVYALSWLVIAIVLVSLKVVSMGREKFITNFQLVFRILKGIVFIVLISLVVI 5310
Query: 234 LIAIPGMTVLDIFVCILAFMPTGW 305
L + +TV D+ ILAF+PTGW
Sbjct: 5311 LFVVFNLTVSDVGASILAFIPTGW 5382
Score = 95.9 bits (203), Expect(3) = 9e-046
Identities = 42/66 (63%), Positives = 49/66 (74%)
Frame = +3 / +1
Query: 333 RPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQI 512
R V+ K G W SI+ +AR YE MG+L+F PIA L+ FVSEFQTR+LFNQAFS GLQI
Sbjct: 5407 RDVLRKIGPWDSIQEMARMYEYTMGILIFFPIAVLSWFPFVSEFQTRLLFNQAFSRGLQI 5586
Query: 513 SRIXXG 530
SRI G
Sbjct: 5587 SRILTG 5604
Score = 23.1 bits (44), Expect(3) = 9e-046
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 15 RYGLVYHLNI 44
+YG+VYHL+I
Sbjct: 5104 QYGIVYHLHI 5133
>dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-F01, full
insert sequence
Length = 1923
Score = 107 bits (229), Expect(3) = 3e-045
Identities = 42/99 (42%), Positives = 64/99 (64%)
Frame = +3 / +2
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
I N+S +VY SW+VI ++L+ +K VS+GR +F FQLVFR++KG++FI ++VVI
Sbjct: 1082 IVHGNRSFMVYALSWLVIAIVLVSLKVVSMGREKFITNFQLVFRILKGIVFIVLISLVVI 1261
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHK 350
L + +TV D+ ILAF+PTGW + P+ +
Sbjct: 1262 LFVVFNLTVSDVGASILAFIPTGWFILQIAQLCGPLFRR 1378
Score = 93.6 bits (198), Expect(3) = 3e-045
Identities = 41/66 (62%), Positives = 49/66 (74%)
Frame = +3 / +2
Query: 333 RPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQI 512
R V+ K G W SI+ +AR YE MG+L+F PIA L+ FVSEFQTR+LF+QAFS GLQI
Sbjct: 1475 RDVLRKIGPWDSIQEMARMYEYTMGILIFFPIAVLSWFPFVSEFQTRLLFSQAFSRGLQI 1654
Query: 513 SRIXXG 530
SRI G
Sbjct: 1655 SRILTG 1672
Score = 23.1 bits (44), Expect(3) = 3e-045
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 15 RYGLVYHLNI 44
+YG+VYHL+I
Sbjct: 1055 QYGIVYHLHI 1084
>dbj|AG210620.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF2001_0_503_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF2001, genomic survey sequence
Length = 504
Score = 106 bits (226), Expect(2) = 5e-045
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / +2
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 41 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 220
Query: 297 TGWGL 311
+GWG+
Sbjct: 221 SGWGI 235
Score = 99.1 bits (210), Expect(2) = 5e-045
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = +3 / +3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFS 497
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA FVSEFQTRMLFNQAFS
Sbjct: 333 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFS 503
>dbj|AG207097.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND7016_0_404_1A,
3' flanking sequence of Tos17 insertion in rice strain
ND7016, genomic survey sequence
Length = 701
Score = 106 bits (226), Expect(4) = 3e-041
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3 / +1
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L +TVSVGRRRFSA+FQL FRLIK +IF++F AI+++LIAI MT+ DIFVC LAF+P
Sbjct: 208 LYCFQTVSVGRRRFSADFQLFFRLIKFMIFVSFIAILIVLIAILHMTLRDIFVCFLAFLP 387
Query: 297 TGWGL 311
+GWG+
Sbjct: 388 SGWGI 402
Score = 64.8 bits (135), Expect(4) = 3e-041
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3 / +2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLA 440
A +P+ + GLWGS++ALAR YEI+MG+LLFTPI LA
Sbjct: 500 ACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILA 613
Score = 32.2 bits (64), Expect(4) = 3e-041
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / +2
Query: 72 SVLVYCFSWVVIFVILLVMK 131
S VY SW+VI V+LLVMK
Sbjct: 26 SFQVYLISWLVILVVLLVMK 85
Score = 28.1 bits (55), Expect(4) = 3e-041
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 450 FVSEFQTRMLF 482
FVSEFQTRMLF
Sbjct: 624 FVSEFQTRMLF 656
>gb|CB662167.1|CB662167 OSJNEd05O23.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O23 3', mRNA sequence
Length = 434
Score = 162 bits (349), Expect(2) = 9e-041
Identities = 64/109 (58%), Positives = 87/109 (79%)
Frame = +3 / -1
Query: 66 NQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
++S+LVY SW+VI V+LLVMKTVSVGRRRFSA+FQ+ FRLIK +IF+ F AI+++LIAI
Sbjct: 347 DKSILVYLISWLVILVVLLVMKTVSVGRRRFSADFQIFFRLIKFMIFVWFIAILIVLIAI 168
Query: 246 PGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGY 392
MT+ DIFVC +AF+P+GWG+ A +P+ + G+WGS++AL R Y
Sbjct: 167 LHMTLRDIFVCFVAFLPSGWGILLIAQACKPLDWRAGIWGSVRALDRAY 21
Score = 28.6 bits (56), Expect(2) = 9e-041
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 15 RYGLVYHLNIT 47
+YGLVYHLNIT
Sbjct: 383 QYGLVYHLNIT 351
>dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0499E08, ***
SEQUENCING IN PROGRESS ***
Length = 85150
Score = 117 bits (251), Expect(3) = 2e-038
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = +3 / -1
Query: 309 LXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQ 488
L A +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LA FVSEFQTR+LFNQ
Sbjct: 38962 LSQISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQ 38783
Query: 489 AFSXGLQISRIXXGHKK 539
AFS GLQISRI G KK
Sbjct: 38782 AFSRGLQISRILAGGKK 38732
Score = 73.9 bits (155), Expect(3) = 2e-038
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +3 / -1
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++ VS+GR++FSA+FQL+FRL+K +FI + IL + +TV DIF LAF PTGW
Sbjct: 40630 LQVVSMGRKKFSADFQLMFRLLKLFLFIGSIGTLAILFTLLHLTVGDIFASFLAFAPTGW 40451
Query: 306 GL 311
+
Sbjct: 40450 AI 40445
Score = 26.7 bits (52), Expect(3) = 2e-038
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3 / -3
Query: 15 RYGLVYHLNITKKITKDNQSVLVYCF 92
+YG++YHLNI+ + S L Y F
Sbjct: 40964 QYGIMYHLNISAGNKSISVSPLFYFF 40887
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0019L07
Length = 131650
Score = 117 bits (251), Expect(2) = 5e-038
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = +3 / -1
Query: 309 LXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQ 488
L A +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LA FVSEFQTR+LFNQ
Sbjct: 121825 LSQISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQ 121646
Query: 489 AFSXGLQISRIXXGHKK 539
AFS GLQISRI G KK
Sbjct: 121645 AFSRGLQISRILAGGKK 121595
Score = 73.9 bits (155), Expect(2) = 5e-038
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +3 / -1
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++ VS+GR++FSA+FQL+FRL+K +FI + IL + +TV DIF LAF PTGW
Sbjct: 123493 LQVVSMGRKKFSADFQLMFRLLKLFLFIGSIGTLAILFTLLHLTVGDIFASFLAFAPTGW 123314
Query: 306 GL 311
+
Sbjct: 123313 AI 123308
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0036B04
Length = 136159
Score = 117 bits (251), Expect(2) = 5e-038
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = +3 / -1
Query: 309 LXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQ 488
L A +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LA FVSEFQTR+LFNQ
Sbjct: 11431 LSQISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQ 11252
Query: 489 AFSXGLQISRIXXGHKK 539
AFS GLQISRI G KK
Sbjct: 11251 AFSRGLQISRILAGGKK 11201
Score = 73.9 bits (155), Expect(2) = 5e-038
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +3 / -1
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++ VS+GR++FSA+FQL+FRL+K +FI + IL + +TV DIF LAF PTGW
Sbjct: 13099 LQVVSMGRKKFSADFQLMFRLLKLFLFIGSIGTLAILFTLLHLTVGDIFASFLAFAPTGW 12920
Query: 306 GL 311
+
Sbjct: 12919 AI 12914
>dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095O05, full
insert sequence
Length = 5774
Score = 160 bits (343), Expect = 2e-037
Identities = 65/162 (40%), Positives = 100/162 (61%)
Frame = +3 / +1
Query: 51 KITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVV 230
KI +++S+ VY SW+ + VI + +S R +++A+ L +R+I+ + I +++
Sbjct: 5008 KIANESRSIAVYLLSWICVAVIFGIFVLMSYARDKYAAKQHLYYRVIQSGVIILAVLVLI 5187
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
I + ++DIF +LAF+PTGWGL IRP I T +W S+ ++AR YEIL+G+
Sbjct: 5188 IFLKFTKFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGV 5367
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
+ P+AF + E QTR+LFN+AFS GLQISRI G K
Sbjct: 5368 FVMAPVAFFSWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 5493
>dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036H01, full
insert sequence
Length = 5949
Score = 160 bits (343), Expect = 2e-037
Identities = 65/162 (40%), Positives = 100/162 (61%)
Frame = +3 / +1
Query: 51 KITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVV 230
KI +++S+ VY SW+ + VI + +S R +++A+ L +R+I+ + I +++
Sbjct: 4912 KIANESRSIAVYLLSWICVAVIFGIFVLMSYARDKYAAKQHLYYRVIQSGVIILAVLVLI 5091
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
I + ++DIF +LAF+PTGWGL IRP I T +W S+ ++AR YEIL+G+
Sbjct: 5092 IFLKFTKFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGV 5271
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
+ P+AF + E QTR+LFN+AFS GLQISRI G K
Sbjct: 5272 FVMAPVAFFSWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 5397
>dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I17, full
insert sequence
Length = 5396
Score = 160 bits (343), Expect = 2e-037
Identities = 65/162 (40%), Positives = 100/162 (61%)
Frame = +3 / +1
Query: 51 KITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVV 230
KI +++S+ VY SW+ + VI + +S R +++A+ L +R+I+ + I +++
Sbjct: 4597 KIANESRSIAVYLLSWICVAVIFGIFVLMSYARDKYAAKQHLYYRVIQSGVIILAVLVLI 4776
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
I + ++DIF +LAF+PTGWGL IRP I T +W S+ ++AR YEIL+G+
Sbjct: 4777 IFLKFTKFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGV 4956
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
+ P+AF + E QTR+LFN+AFS GLQISRI G K
Sbjct: 4957 FVMAPVAFFSWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 5082
>gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002367, whole
genome shotgun sequence
Length = 23038
Score = 160 bits (343), Expect = 2e-037
Identities = 65/162 (40%), Positives = 100/162 (61%)
Frame = +3 / +3
Query: 51 KITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVV 230
KI +++S+ VY SW+ + VI + +S R +++A+ L +R+I+ + I +++
Sbjct: 12849 KIANESRSIAVYLLSWICVAVIFGIFVLMSYARDKYAAKQHLYYRVIQSGVIILAVLVLI 13028
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
I + ++DIF +LAF+PTGWGL IRP I T +W S+ ++AR YEIL+G+
Sbjct: 13029 IFLKFTKFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGV 13208
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
+ P+AF + E QTR+LFN+AFS GLQISRI G K
Sbjct: 13209 FVMAPVAFFSWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 13334
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 160 bits (343), Expect = 2e-037
Identities = 65/162 (40%), Positives = 100/162 (61%)
Frame = +3 / -1
Query: 51 KITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVV 230
KI +++S+ VY SW+ + VI + +S R +++A+ L +R+I+ + I +++
Sbjct: 31717194 KIANESRSIAVYLLSWICVAVIFGIFVLMSYARDKYAAKQHLYYRVIQSGVIILAVLVLI 31717015
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
I + ++DIF +LAF+PTGWGL IRP I T +W S+ ++AR YEIL+G+
Sbjct: 31717014 IFLKFTKFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGV 31716835
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
+ P+AF + E QTR+LFN+AFS GLQISRI G K
Sbjct: 31716834 FVMAPVAFFSWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 31716709
>ref|NM_191270.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 5373
Score = 160 bits (343), Expect = 2e-037
Identities = 65/162 (40%), Positives = 100/162 (61%)
Frame = +3 / +1
Query: 51 KITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVV 230
KI +++S+ VY SW+ + VI + +S R +++A+ L +R+I+ + I +++
Sbjct: 4873 KIANESRSIAVYLLSWICVAVIFGIFVLMSYARDKYAAKQHLYYRVIQSGVIILAVLVLI 5052
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
I + ++DIF +LAF+PTGWGL IRP I T +W S+ ++AR YEIL+G+
Sbjct: 5053 IFLKFTKFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGV 5232
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
+ P+AF + E QTR+LFN+AFS GLQISRI G K
Sbjct: 5233 FVMAPVAFFSWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 5358
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 160 bits (343), Expect = 2e-037
Identities = 65/162 (40%), Positives = 100/162 (61%)
Frame = +3 / -1
Query: 51 KITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVV 230
KI +++S+ VY SW+ + VI + +S R +++A+ L +R+I+ + I +++
Sbjct: 6164577 KIANESRSIAVYLLSWICVAVIFGIFVLMSYARDKYAAKQHLYYRVIQSGVIILAVLVLI 6164398
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
I + ++DIF +LAF+PTGWGL IRP I T +W S+ ++AR YEIL+G+
Sbjct: 6164397 IFLKFTKFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGV 6164218
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
+ P+AF + E QTR+LFN+AFS GLQISRI G K
Sbjct: 6164217 FVMAPVAFFSWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 6164092
Score = 78.5 bits (165), Expect(2) = 1e-027
Identities = 29/100 (29%), Positives = 56/100 (56%)
Frame = +3 / -1
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
I ++S+LVY SW + + + + TV+ R ++SA+ + +RL++ +I A +V+
Sbjct: 2129019 IAGTSKSILVYLLSWACVLLAFVALVTVAYFRDKYSAKKHIRYRLVQAIIVGATVAAIVL 2128840
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKT 353
L+ +D F +LAF+PTGWG+ +P + ++
Sbjct: 2128839 LLEFTKFQFIDTFTSLLAFLPTGWGIISIALVFKPYLRRS 2128720
Score = 68.9 bits (144), Expect(2) = 1e-027
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +3 / -1
Query: 357 LWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
+W S+ LAR Y+I+ G+++ P+A L+ + E QTR+LFN+AFS GL IS+I G K
Sbjct: 2128713 VWRSVVTLARLYDIMFGVIVMAPVAVLSWLPGLQEMQTRILFNEAFSRGLHISQIITGKK 2128534
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,557,808,147
Number of Sequences: 438736
Number of extensions: 48311280
Number of successful extensions: 169463
Number of sequences better than 1.0e-020: 117
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 160643054937
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)