TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418946.2.1
(690 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB659584.1|CB659584 OSJNEc16L01.r OSJNEc Oryza sativa (j... 235 4e-060
gb|AY324384.1| Oryza sativa (japonica cultivar-group) callo... 235 4e-060
dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA... 235 4e-060
ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA 235 4e-060
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 181 5e-056
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 181 5e-056
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 181 5e-056
dbj|AP005750.3| Oryza sativa (japonica cultivar-group) geno... 181 5e-056
gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) c... 181 5e-056
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 182 2e-055
dbj|AP004082.3| Oryza sativa (japonica cultivar-group) geno... 182 2e-055
dbj|AP005290.2| Oryza sativa (japonica cultivar-group) geno... 182 2e-055
gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) c... 182 2e-055
gb|CB642890.1|CB642890 OSJNEb03E21.r OSJNEb Oryza sativa (j... 193 1e-047
gb|CB677903.1|CB677903 OSJNEe15F12.r OSJNEe Oryza sativa (j... 193 1e-047
dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA... 193 1e-047
dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA... 193 1e-047
ref|NM_187591.1| Oryza sativa (japonica cultivar-group), p... 193 1e-047
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 182 4e-044
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 182 4e-044
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 182 4e-044
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 181 7e-044
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 181 7e-044
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 151 4e-043
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 151 4e-043
gb|AC144426.1| Oryza sativa (japonica cultivar-group) chrom... 151 4e-043
gb|AC104427.2| Oryza sativa (japonica cultivar-group) chrom... 151 4e-043
gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) c... 151 4e-043
dbj|AG209376.1| Oryza sativa (japonica cultivar-group) DNA,... 151 4e-043
dbj|AG210594.1| Oryza sativa (japonica cultivar-group) DNA,... 151 4e-043
gb|C24849.1|C24849 C24849 Rice green shoot Oryza sativa (ja... 177 2e-042
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 151 8e-035
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 151 8e-035
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 151 8e-035
dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chro... 142 3e-034
dbj|AP007257.2| Oryza sativa (japonica cultivar-group) geno... 142 5e-034
dbj|AP007226.1| Oryza sativa (japonica cultivar-group) geno... 142 5e-034
dbj|AG207902.1| Oryza sativa (japonica cultivar-group) DNA,... 148 6e-034
dbj|AG210620.1| Oryza sativa (japonica cultivar-group) DNA,... 119 2e-033
ref|NM_187562.1| Oryza sativa (japonica cultivar-group), p... 145 4e-033
gb|CB666398.1|CB666398 OSJNEd13E16.f OSJNEd Oryza sativa (j... 145 5e-033
gb|CB666399.1|CB666399 OSJNEd13E16.r OSJNEd Oryza sativa (j... 145 5e-033
gb|CB671522.1|CB671522 OSJNEe05C09.r OSJNEe Oryza sativa (j... 145 5e-033
dbj|AK059373.1| Oryza sativa (japonica cultivar-group) cDNA... 145 5e-033
dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA... 145 5e-033
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 142 3e-032
gb|AACV01013161.1| Oryza sativa (japonica cultivar-group) c... 142 4e-032
dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA... 141 7e-032
dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA... 141 7e-032
dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA... 141 7e-032
gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) c... 141 7e-032
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 141 7e-032
ref|NM_191270.1| Oryza sativa (japonica cultivar-group), p... 141 7e-032
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 141 7e-032
dbj|AP003249.3| Oryza sativa (japonica cultivar-group) geno... 141 7e-032
dbj|AP003268.4| Oryza sativa (japonica cultivar-group) geno... 141 7e-032
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 141 7e-032
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 141 7e-032
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 141 7e-032
ref|NM_193203.1| Oryza sativa (japonica cultivar-group), p... 125 1e-030
gb|AACV01001409.1| Oryza sativa (japonica cultivar-group) c... 121 3e-030
dbj|AP003447.2| Oryza sativa (japonica cultivar-group) geno... 121 1e-029
dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA... 111 5e-029
ref|NM_193211.1| Oryza sativa (japonica cultivar-group), p... 113 3e-028
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 121 7e-028
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 121 7e-028
dbj|AG207097.1| Oryza sativa (japonica cultivar-group) DNA,... 83 1e-027
gb|CB684141.1|CB684141 OSJNEf13F24.r OSJNEf Oryza sativa (j... 126 2e-027
dbj|AK059569.1| Oryza sativa (japonica cultivar-group) cDNA... 126 2e-027
dbj|AK071856.1| Oryza sativa (japonica cultivar-group) cDNA... 126 2e-027
ref|XM_550490.1| Oryza sativa (japonica cultivar-group), mRNA 126 2e-027
dbj|AK099834.1| Oryza sativa (japonica cultivar-group) cDNA... 119 3e-026
gb|AACV01005773.1| Oryza sativa (japonica cultivar-group) c... 111 4e-026
gb|AACV01001413.1| Oryza sativa (japonica cultivar-group) c... 113 5e-026
gb|AC118980.2| Oryza sativa (japonica cultivar-group) chrom... 111 6e-026
dbj|AP003445.2| Oryza sativa (japonica cultivar-group) geno... 113 2e-025
gb|AQ865628.1|AQ865628 nbeb0025D14r CUGI Rice BAC Library (... 113 2e-023
gb|CB662166.1|CB662166 OSJNEd05O23.f OSJNEd Oryza sativa (j... 112 4e-023
dbj|AB156041.1| Oryza sativa (japonica cultivar-group) DNA,... 110 2e-022
gb|AACV01012882.1| Oryza sativa (japonica cultivar-group) c... 100 3e-021
dbj|AP003264.3| Oryza sativa (japonica cultivar-group) geno... 83 5e-021
dbj|AP003223.3| Oryza sativa (japonica cultivar-group) geno... 83 5e-021
gb|AACV01002091.1| Oryza sativa (japonica cultivar-group) c... 83 5e-021
ref|NM_191973.1| Oryza sativa (japonica cultivar-group), p... 83 5e-021
dbj|AK060407.1| Oryza sativa (japonica cultivar-group) cDNA... 83 5e-021
gb|CB662462.1|CB662462 OSJNEd06I07.r OSJNEd Oryza sativa (j... 83 5e-021
gb|CB662405.1|CB662405 OSJNEd06G07.r OSJNEd Oryza sativa (j... 83 5e-021
>gb|CB659584.1|CB659584 OSJNEc16L01.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16L01 3', mRNA sequence
Length = 760
Score = 235 bits (508), Expect = 4e-060
Identities = 98/107 (91%), Positives = 102/107 (95%)
Frame = +1 / -3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWGLLL+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTP
Sbjct: 434 PHMTVQDIFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTP 255
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR TRNKE*
Sbjct: 254 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 114
Score = 160 bits (343), Expect = 2e-037
Identities = 71/107 (66%), Positives = 78/107 (72%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 115 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 294
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
ALI+P +P+ ITG IA A +S+P PVGMKARMQT MS TV+ G
Sbjct: 295 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKMSWTVI*G 435
Score = 144 bits (308), Expect = 1e-032
Identities = 57/115 (49%), Positives = 76/115 (66%)
Frame = +3 / -2
Query: 18 HRGNPNSDPWHDGAGHICLHPCFHAHWMGFAADCPSDPACDPQDWALGLDQGSCPGLRDP 197
H N +S+P +D GH+CLH C HA+W+G A C S A + +G+DQG+C G+ D
Sbjct: 459 HHYNLDSNPSYDSPGHLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DH 280
Query: 198 DGTSPVHAHRLPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRI 362
G +H R+PRLVPV + +PDQ+A+QPG+QQRSADL P R QERP EQ +
Sbjct: 279 HGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 115
Score = 84.5 bits (178), Expect(2) = 1e-024
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -1 / +3
Query: 201 HQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPSSGHESKDANKYVQHRHARDRY*DYH 22
H DL++P K LDR+P+P ++ D L NQQQTP+S HE K+ANK V H RD Y DY+
Sbjct: 276 HDDLISPRKRLDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKDVLDCHMRDCYQDYN 455
Query: 21 DGCSC 7
DG C
Sbjct: 456 DGDKC 470
Score = 52.8 bits (109), Expect(2) = 1e-024
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -1 / +3
Query: 363 LFFVPGPSVFLVSSQDTGDLQTSAERLVEQHPGLE 259
L VP SVFLV+++D+ DLQTSAE LVE+H GLE
Sbjct: 114 LLLVPCSSVFLVAAKDSRDLQTSAEGLVEEHSGLE 218
>gb|AY324384.1| Oryza sativa (japonica cultivar-group) callose synthase-like protein
mRNA, partial cds
Length = 2727
Score = 235 bits (508), Expect = 4e-060
Identities = 98/107 (91%), Positives = 102/107 (95%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWGLLL+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTP
Sbjct: 2407 PHMTVQDIFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTP 2586
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR TRNKE*
Sbjct: 2587 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 2727
Score = 160 bits (343), Expect = 2e-037
Identities = 71/107 (66%), Positives = 78/107 (72%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 2726 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 2547
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
ALI+P +P+ ITG IA A +S+P PVGMKARMQT MS TV+ G
Sbjct: 2546 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKMSWTVI*G 2406
Score = 144 bits (308), Expect = 1e-032
Identities = 57/115 (49%), Positives = 76/115 (66%)
Frame = +3 / +3
Query: 18 HRGNPNSDPWHDGAGHICLHPCFHAHWMGFAADCPSDPACDPQDWALGLDQGSCPGLRDP 197
H N +S+P +D GH+CLH C HA+W+G A C S A + +G+DQG+C G+ D
Sbjct: 2382 HHYNLDSNPSYDSPGHLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DH 2561
Query: 198 DGTSPVHAHRLPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRI 362
G +H R+PRLVPV + +PDQ+A+QPG+QQRSADL P R QERP EQ +
Sbjct: 2562 HGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 2726
Score = 84.5 bits (178), Expect(2) = 1e-024
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -1 / -1
Query: 201 HQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPSSGHESKDANKYVQHRHARDRY*DYH 22
H DL++P K LDR+P+P ++ D L NQQQTP+S HE K+ANK V H RD Y DY+
Sbjct: 2565 HDDLISPRKRLDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKDVLDCHMRDCYQDYN 2386
Query: 21 DGCSC 7
DG C
Sbjct: 2385 DGDKC 2371
Score = 52.8 bits (109), Expect(2) = 1e-024
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 363 LFFVPGPSVFLVSSQDTGDLQTSAERLVEQHPGLE 259
L VP SVFLV+++D+ DLQTSAE LVE+H GLE
Sbjct: 2727 LLLVPCSSVFLVAAKDSRDLQTSAEGLVEEHSGLE 2623
>dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F07, full
insert sequence
Length = 1292
Score = 235 bits (508), Expect = 4e-060
Identities = 98/107 (91%), Positives = 102/107 (95%)
Frame = +1 / +2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWGLLL+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTP
Sbjct: 617 PHMTVQDIFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTP 796
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR TRNKE*
Sbjct: 797 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 937
Score = 160 bits (343), Expect = 2e-037
Identities = 71/107 (66%), Positives = 78/107 (72%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 936 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 757
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
ALI+P +P+ ITG IA A +S+P PVGMKARMQT MS TV+ G
Sbjct: 756 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKMSWTVI*G 616
Score = 142 bits (305), Expect = 4e-032
Identities = 56/115 (48%), Positives = 76/115 (66%)
Frame = +3 / +1
Query: 18 HRGNPNSDPWHDGAGHICLHPCFHAHWMGFAADCPSDPACDPQDWALGLDQGSCPGLRDP 197
H N +++P +D GH+CLH C HA+W+G A C S A + +G+DQG+C G+ D
Sbjct: 592 HHYNLDNNPSYDSPGHLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DH 771
Query: 198 DGTSPVHAHRLPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRI 362
G +H R+PRLVPV + +PDQ+A+QPG+QQRSADL P R QERP EQ +
Sbjct: 772 HGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 936
Score = 84.5 bits (178), Expect(2) = 1e-024
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -1 / -2
Query: 201 HQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPSSGHESKDANKYVQHRHARDRY*DYH 22
H DL++P K LDR+P+P ++ D L NQQQTP+S HE K+ANK V H RD Y DY+
Sbjct: 775 HDDLISPRKRLDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKDVLDCHMRDCYQDYN 596
Query: 21 DGCSC 7
DG C
Sbjct: 595 DGDKC 581
Score = 52.8 bits (109), Expect(2) = 1e-024
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 363 LFFVPGPSVFLVSSQDTGDLQTSAERLVEQHPGLE 259
L VP SVFLV+++D+ DLQTSAE LVE+H GLE
Sbjct: 937 LLLVPCSSVFLVAAKDSRDLQTSAEGLVEEHSGLE 833
>ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5910
Score = 235 bits (508), Expect = 4e-060
Identities = 98/107 (91%), Positives = 102/107 (95%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P MTV DIFVCILAFMPTGWGLLL+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTP
Sbjct: 5590 PHMTVQDIFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTP 5769
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR TRNKE*
Sbjct: 5770 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 5910
Score = 160 bits (343), Expect = 2e-037
Identities = 71/107 (66%), Positives = 78/107 (72%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 5909 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 5730
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
ALI+P +P+ ITG IA A +S+P PVGMKARMQT MS TV+ G
Sbjct: 5729 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKMSWTVI*G 5589
Score = 144 bits (308), Expect = 1e-032
Identities = 57/115 (49%), Positives = 76/115 (66%)
Frame = +3 / +3
Query: 18 HRGNPNSDPWHDGAGHICLHPCFHAHWMGFAADCPSDPACDPQDWALGLDQGSCPGLRDP 197
H N +S+P +D GH+CLH C HA+W+G A C S A + +G+DQG+C G+ D
Sbjct: 5565 HHYNLDSNPSYDSPGHLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DH 5744
Query: 198 DGTSPVHAHRLPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRI 362
G +H R+PRLVPV + +PDQ+A+QPG+QQRSADL P R QERP EQ +
Sbjct: 5745 HGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 5909
Score = 84.5 bits (178), Expect(2) = 1e-024
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -1 / -1
Query: 201 HQDLVAPGKSLDRAPEPSLVDHRPDRLGNQQQTPSSGHESKDANKYVQHRHARDRY*DYH 22
H DL++P K LDR+P+P ++ D L NQQQTP+S HE K+ANK V H RD Y DY+
Sbjct: 5748 HDDLISPRKRLDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKDVLDCHMRDCYQDYN 5569
Query: 21 DGCSC 7
DG C
Sbjct: 5568 DGDKC 5554
Score = 52.8 bits (109), Expect(2) = 1e-024
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 363 LFFVPGPSVFLVSSQDTGDLQTSAERLVEQHPGLE 259
L VP SVFLV+++D+ DLQTSAE LVE+H GLE
Sbjct: 5910 LLLVPCSSVFLVAAKDSRDLQTSAEGLVEEHSGLE 5806
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 181 bits (390), Expect(2) = 5e-056
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1 / -1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQAI+P + GLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 11850107 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 11849928
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 11849927 RGLQISRILGGHKKDRSTRNKE* 11849859
Score = 137 bits (294), Expect(2) = 2e-038
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3 / -3
Query: 111 ADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGV 290
+DC S C P WALG++QGSCPGL DP+GT +H H +P LV RV +PDQDA+QPG+
Sbjct: 11850111 SDCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGL 11849932
Query: 291 QQRSADLPYPGRTQERPRDPEQRI 362
QQRSADLPYP R QERP +PEQ +
Sbjct: 11849931 QQRSADLPYPWRAQERPINPEQGV 11849860
Score = 133 bits (286), Expect(2) = 6e-038
Identities = 57/83 (68%), Positives = 60/83 (72%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFLCPPRIREICRPLL AWL SILVWNSDT GNQAR AMGVN
Sbjct: 11849860 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 11850039
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
ALI+PQSP+ W G +A AI
Sbjct: 11850040 RARALIDPQSPIAWTAGLMACAI 11850108
Score = 64.3 bits (134), Expect(3) = 2e-024
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / +3
Query: 366 ALFFVPGPSVFLVSSQDTGDLQTSAERLVEQHPGLE 259
+L VPG SVFLV ++DTGDLQTSAE LVE+HPGLE
Sbjct: 11849856 SLLLVPG*SVFLVPAKDTGDLQTSAEGLVEEHPGLE 11849963
Score = 60.6 bits (126), Expect(2) = 5e-056
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1 / -2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P MTVLDIFVCILAFMPTGWGLLL++
Sbjct: 11850277 PHMTVLDIFVCILAFMPTGWGLLLVS 11850200
Score = 47.8 bits (98), Expect(2) = 6e-038
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = -1 / +2
Query: 123 LGNQQQTPSSGHESKDANKYVQHRHARDRY*DYHDGCSC 7
+ NQ+Q PSS HESKDAN+ +++ H RD * +++G C
Sbjct: 11850197 VANQKQAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKC 11850313
Score = 46.4 bits (95), Expect(3) = 2e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / +3
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
SKPHPVGMKARMQT +S TVM G
Sbjct: 11850210 SKPHPVGMKARMQTKISRTVM*G 11850278
Score = 46.0 bits (94), Expect(2) = 2e-038
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 33 NSDPWHDGAGHICLHPCFHAHWMGFAA 113
N P HD + ++ LHPCFHA+WMG A+
Sbjct: 11850287 NCHPSHDSS*YLRLHPCFHANWMGLAS 11850207
Score = 43.2 bits (88), Expect(3) = 2e-024
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -1 / +3
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGN 115
+SH DL+APGKSLD +P+P+ +D R D L N
Sbjct: 11850015 ESH*DLIAPGKSLD*SPKPNSLDSRFDGLRN 11850107
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 181 bits (390), Expect(2) = 5e-056
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1 / -1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQAI+P + GLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 155449 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 155270
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 155269 RGLQISRILGGHKKDRSTRNKE* 155201
Score = 137 bits (294), Expect(2) = 2e-038
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3 / -3
Query: 111 ADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGV 290
+DC S C P WALG++QGSCPGL DP+GT +H H +P LV RV +PDQDA+QPG+
Sbjct: 155453 SDCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGL 155274
Query: 291 QQRSADLPYPGRTQERPRDPEQRI 362
QQRSADLPYP R QERP +PEQ +
Sbjct: 155273 QQRSADLPYPWRAQERPINPEQGV 155202
Score = 133 bits (286), Expect(2) = 6e-038
Identities = 57/83 (68%), Positives = 60/83 (72%)
Frame = -2 / +3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFLCPPRIREICRPLL AWL SILVWNSDT GNQAR AMGVN
Sbjct: 155202 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 155381
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
ALI+PQSP+ W G +A AI
Sbjct: 155382 RARALIDPQSPIAWTAGLMACAI 155450
Score = 64.3 bits (134), Expect(3) = 2e-024
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / +2
Query: 366 ALFFVPGPSVFLVSSQDTGDLQTSAERLVEQHPGLE 259
+L VPG SVFLV ++DTGDLQTSAE LVE+HPGLE
Sbjct: 155198 SLLLVPG*SVFLVPAKDTGDLQTSAEGLVEEHPGLE 155305
Score = 60.6 bits (126), Expect(2) = 5e-056
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1 / -2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P MTVLDIFVCILAFMPTGWGLLL++
Sbjct: 155619 PHMTVLDIFVCILAFMPTGWGLLLVS 155542
Score = 47.8 bits (98), Expect(2) = 6e-038
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = -1 / +1
Query: 123 LGNQQQTPSSGHESKDANKYVQHRHARDRY*DYHDGCSC 7
+ NQ+Q PSS HESKDAN+ +++ H RD * +++G C
Sbjct: 155539 VANQKQAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKC 155655
Score = 46.4 bits (95), Expect(3) = 2e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / +2
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
SKPHPVGMKARMQT +S TVM G
Sbjct: 155552 SKPHPVGMKARMQTKISRTVM*G 155620
Score = 46.0 bits (94), Expect(2) = 2e-038
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 33 NSDPWHDGAGHICLHPCFHAHWMGFAA 113
N P HD + ++ LHPCFHA+WMG A+
Sbjct: 155629 NCHPSHDSS*YLRLHPCFHANWMGLAS 155549
Score = 43.2 bits (88), Expect(3) = 2e-024
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -1 / +2
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGN 115
+SH DL+APGKSLD +P+P+ +D R D L N
Sbjct: 155357 ESH*DLIAPGKSLD*SPKPNSLDSRFDGLRN 155449
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 181 bits (390), Expect(2) = 5e-056
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1 / -2
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQAI+P + GLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 155449 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 155270
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 155269 RGLQISRILGGHKKDRSTRNKE* 155201
Score = 137 bits (294), Expect(2) = 2e-038
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3 / -1
Query: 111 ADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGV 290
+DC S C P WALG++QGSCPGL DP+GT +H H +P LV RV +PDQDA+QPG+
Sbjct: 155453 SDCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGL 155274
Query: 291 QQRSADLPYPGRTQERPRDPEQRI 362
QQRSADLPYP R QERP +PEQ +
Sbjct: 155273 QQRSADLPYPWRAQERPINPEQGV 155202
Score = 133 bits (286), Expect(2) = 6e-038
Identities = 57/83 (68%), Positives = 60/83 (72%)
Frame = -2 / +3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFLCPPRIREICRPLL AWL SILVWNSDT GNQAR AMGVN
Sbjct: 155202 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 155381
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
ALI+PQSP+ W G +A AI
Sbjct: 155382 RARALIDPQSPIAWTAGLMACAI 155450
Score = 64.3 bits (134), Expect(3) = 2e-024
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / +2
Query: 366 ALFFVPGPSVFLVSSQDTGDLQTSAERLVEQHPGLE 259
+L VPG SVFLV ++DTGDLQTSAE LVE+HPGLE
Sbjct: 155198 SLLLVPG*SVFLVPAKDTGDLQTSAEGLVEEHPGLE 155305
Score = 60.6 bits (126), Expect(2) = 5e-056
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1 / -3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P MTVLDIFVCILAFMPTGWGLLL++
Sbjct: 155619 PHMTVLDIFVCILAFMPTGWGLLLVS 155542
Score = 47.8 bits (98), Expect(2) = 6e-038
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = -1 / +1
Query: 123 LGNQQQTPSSGHESKDANKYVQHRHARDRY*DYHDGCSC 7
+ NQ+Q PSS HESKDAN+ +++ H RD * +++G C
Sbjct: 155539 VANQKQAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKC 155655
Score = 46.4 bits (95), Expect(3) = 2e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / +2
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
SKPHPVGMKARMQT +S TVM G
Sbjct: 155552 SKPHPVGMKARMQTKISRTVM*G 155620
Score = 46.0 bits (94), Expect(2) = 2e-038
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 33 NSDPWHDGAGHICLHPCFHAHWMGFAA 113
N P HD + ++ LHPCFHA+WMG A+
Sbjct: 155629 NCHPSHDSS*YLRLHPCFHANWMGLAS 155549
Score = 43.2 bits (88), Expect(3) = 2e-024
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -1 / +2
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGN 115
+SH DL+APGKSLD +P+P+ +D R D L N
Sbjct: 155357 ESH*DLIAPGKSLD*SPKPNSLDSRFDGLRN 155449
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0069C14
Length = 150579
Score = 181 bits (390), Expect(2) = 5e-056
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1 / -3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQAI+P + GLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 16651 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 16472
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 16471 RGLQISRILGGHKKDRSTRNKE* 16403
Score = 137 bits (294), Expect(2) = 2e-038
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3 / -2
Query: 111 ADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGV 290
+DC S C P WALG++QGSCPGL DP+GT +H H +P LV RV +PDQDA+QPG+
Sbjct: 16655 SDCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGL 16476
Query: 291 QQRSADLPYPGRTQERPRDPEQRI 362
QQRSADLPYP R QERP +PEQ +
Sbjct: 16475 QQRSADLPYPWRAQERPINPEQGV 16404
Score = 133 bits (286), Expect(2) = 6e-038
Identities = 57/83 (68%), Positives = 60/83 (72%)
Frame = -2 / +3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFLCPPRIREICRPLL AWL SILVWNSDT GNQAR AMGVN
Sbjct: 16404 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 16583
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
ALI+PQSP+ W G +A AI
Sbjct: 16584 RARALIDPQSPIAWTAGLMACAI 16652
Score = 64.3 bits (134), Expect(3) = 2e-024
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / +2
Query: 366 ALFFVPGPSVFLVSSQDTGDLQTSAERLVEQHPGLE 259
+L VPG SVFLV ++DTGDLQTSAE LVE+HPGLE
Sbjct: 16400 SLLLVPG*SVFLVPAKDTGDLQTSAEGLVEEHPGLE 16507
Score = 60.6 bits (126), Expect(2) = 5e-056
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P MTVLDIFVCILAFMPTGWGLLL++
Sbjct: 16821 PHMTVLDIFVCILAFMPTGWGLLLVS 16744
Score = 47.8 bits (98), Expect(2) = 6e-038
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = -1 / +1
Query: 123 LGNQQQTPSSGHESKDANKYVQHRHARDRY*DYHDGCSC 7
+ NQ+Q PSS HESKDAN+ +++ H RD * +++G C
Sbjct: 16741 VANQKQAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKC 16857
Score = 46.4 bits (95), Expect(3) = 2e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / +2
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
SKPHPVGMKARMQT +S TVM G
Sbjct: 16754 SKPHPVGMKARMQTKISRTVM*G 16822
Score = 46.0 bits (94), Expect(2) = 2e-038
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 33 NSDPWHDGAGHICLHPCFHAHWMGFAA 113
N P HD + ++ LHPCFHA+WMG A+
Sbjct: 16831 NCHPSHDSS*YLRLHPCFHANWMGLAS 16751
Score = 43.2 bits (88), Expect(3) = 2e-024
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -1 / +2
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGN 115
+SH DL+APGKSLD +P+P+ +D R D L N
Sbjct: 16559 ESH*DLIAPGKSLD*SPKPNSLDSRFDGLRN 16651
>gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014975, whole
genome shotgun sequence
Length = 9397
Score = 181 bits (390), Expect(2) = 5e-056
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQAI+P + GLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 5068 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 5247
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 5248 RGLQISRILGGHKKDRSTRNKE* 5316
Score = 137 bits (294), Expect(2) = 2e-038
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3 / +3
Query: 111 ADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGV 290
+DC S C P WALG++QGSCPGL DP+GT +H H +P LV RV +PDQDA+QPG+
Sbjct: 5064 SDCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGL 5243
Query: 291 QQRSADLPYPGRTQERPRDPEQRI 362
QQRSADLPYP R QERP +PEQ +
Sbjct: 5244 QQRSADLPYPWRAQERPINPEQGV 5315
Score = 133 bits (286), Expect(2) = 6e-038
Identities = 57/83 (68%), Positives = 60/83 (72%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFLCPPRIREICRPLL AWL SILVWNSDT GNQAR AMGVN
Sbjct: 5315 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 5136
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
ALI+PQSP+ W G +A AI
Sbjct: 5135 RARALIDPQSPIAWTAGLMACAI 5067
Score = 64.3 bits (134), Expect(3) = 2e-024
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / -2
Query: 366 ALFFVPGPSVFLVSSQDTGDLQTSAERLVEQHPGLE 259
+L VPG SVFLV ++DTGDLQTSAE LVE+HPGLE
Sbjct: 5319 SLLLVPG*SVFLVPAKDTGDLQTSAEGLVEEHPGLE 5212
Score = 60.6 bits (126), Expect(2) = 5e-056
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1 / +2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P MTVLDIFVCILAFMPTGWGLLL++
Sbjct: 4898 PHMTVLDIFVCILAFMPTGWGLLLVS 4975
Score = 47.8 bits (98), Expect(2) = 6e-038
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = -1 / -1
Query: 123 LGNQQQTPSSGHESKDANKYVQHRHARDRY*DYHDGCSC 7
+ NQ+Q PSS HESKDAN+ +++ H RD * +++G C
Sbjct: 4978 VANQKQAPSSWHESKDANEDIKNCHVRDGN*YHNNGDKC 4862
Score = 46.4 bits (95), Expect(3) = 2e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -2
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
SKPHPVGMKARMQT +S TVM G
Sbjct: 4965 SKPHPVGMKARMQTKISRTVM*G 4897
Score = 46.0 bits (94), Expect(2) = 2e-038
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 33 NSDPWHDGAGHICLHPCFHAHWMGFAA 113
N P HD + ++ LHPCFHA+WMG A+
Sbjct: 4888 NCHPSHDSS*YLRLHPCFHANWMGLAS 4968
Score = 43.2 bits (88), Expect(3) = 2e-024
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -1 / -2
Query: 207 KSHQDLVAPGKSLDRAPEPSLVDHRPDRLGN 115
+SH DL+APGKSLD +P+P+ +D R D L N
Sbjct: 5160 ESH*DLIAPGKSLD*SPKPNSLDSRFDGLRN 5068
>ref|NT_107182.1| Oryza sativa (japonica cultivar-group)
Length = 1785023
Score = 182 bits (392), Expect(2) = 2e-055
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +1 / +2
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1657658 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 1657837
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 1657838 RGLQISRILGGHKKDRATRNKE* 1657906
Score = 122 bits (261), Expect(2) = 5e-036
Identities = 54/82 (65%), Positives = 58/82 (70%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 1657905 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 1657726
Query: 182 XXXALIEPQSPVLWITGRIAWA 117
ALI+P +P+ ITG IA A
Sbjct: 1657725 LASALIDPHNPMRTITGLIACA 1657660
Score = 96.8 bits (205), Expect(2) = 1e-027
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +3 / +1
Query: 117 CPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGVQQ 296
C S A + +G+DQG+C G+ D G +H R+PRLVPV + +PDQ+A+QPG+QQ
Sbjct: 1657660 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 1657839
Query: 297 RSADLPYPGRTQERPRDPEQRI 362
RSADL P R QERP EQ +
Sbjct: 1657840 RSADLANPWRPQERPSYTEQGV 1657905
Score = 57.9 bits (120), Expect(2) = 2e-055
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1 / +2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P MTV DIFVCILAFMPTGWGLLL++
Sbjct: 1657508 PHMTVQDIFVCILAFMPTGWGLLLVS 1657585
Score = 52.8 bits (109), Expect(2) = 5e-036
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -1 / -2
Query: 114 QQQTPSSGHESKDANKYVQHRHARDRY*DYHDGCSC 7
QQQTP+S HE K+ANK V H RD Y DY+DG C
Sbjct: 1657579 QQQTPASWHEGKNANKDVLDCHMRDCYQDYNDGDKC 1657472
Score = 50.6 bits (104), Expect(2) = 1e-027
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3 / +1
Query: 18 HRGNPNSDPWHDGAGHICLHPCFHAHWMGFA 110
H N +S+P +D GH+CLH C HA+W+G A
Sbjct: 1657483 HHYNLDSNPSYDSPGHLCLHSCLHANWLGSA 1657575
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1149_C12
Length = 120743
Score = 182 bits (392), Expect(2) = 2e-055
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +1 / +1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 93100 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 93279
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 93280 RGLQISRILGGHKKDRATRNKE* 93348
Score = 122 bits (261), Expect(2) = 5e-036
Identities = 54/82 (65%), Positives = 58/82 (70%)
Frame = -2 / -1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 93347 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 93168
Query: 182 XXXALIEPQSPVLWITGRIAWA 117
ALI+P +P+ ITG IA A
Sbjct: 93167 LASALIDPHNPMRTITGLIACA 93102
Score = 96.8 bits (205), Expect(2) = 1e-027
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +3 / +3
Query: 117 CPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGVQQ 296
C S A + +G+DQG+C G+ D G +H R+PRLVPV + +PDQ+A+QPG+QQ
Sbjct: 93102 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 93281
Query: 297 RSADLPYPGRTQERPRDPEQRI 362
RSADL P R QERP EQ +
Sbjct: 93282 RSADLANPWRPQERPSYTEQGV 93347
Score = 57.9 bits (120), Expect(2) = 2e-055
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P MTV DIFVCILAFMPTGWGLLL++
Sbjct: 92950 PHMTVQDIFVCILAFMPTGWGLLLVS 93027
Score = 52.8 bits (109), Expect(2) = 5e-036
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -1 / -3
Query: 114 QQQTPSSGHESKDANKYVQHRHARDRY*DYHDGCSC 7
QQQTP+S HE K+ANK V H RD Y DY+DG C
Sbjct: 93021 QQQTPASWHEGKNANKDVLDCHMRDCYQDYNDGDKC 92914
Score = 50.6 bits (104), Expect(2) = 1e-027
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3 / +3
Query: 18 HRGNPNSDPWHDGAGHICLHPCFHAHWMGFA 110
H N +S+P +D GH+CLH C HA+W+G A
Sbjct: 92925 HHYNLDSNPSYDSPGHLCLHSCLHANWLGSA 93017
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1282_E10
Length = 107284
Score = 182 bits (392), Expect(2) = 2e-055
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +1 / +1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 12931 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 13110
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 13111 RGLQISRILGGHKKDRATRNKE* 13179
Score = 122 bits (261), Expect(2) = 5e-036
Identities = 54/82 (65%), Positives = 58/82 (70%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 13178 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 12999
Query: 182 XXXALIEPQSPVLWITGRIAWA 117
ALI+P +P+ ITG IA A
Sbjct: 12998 LASALIDPHNPMRTITGLIACA 12933
Score = 96.8 bits (205), Expect(2) = 1e-027
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +3 / +3
Query: 117 CPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGVQQ 296
C S A + +G+DQG+C G+ D G +H R+PRLVPV + +PDQ+A+QPG+QQ
Sbjct: 12933 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 13112
Query: 297 RSADLPYPGRTQERPRDPEQRI 362
RSADL P R QERP EQ +
Sbjct: 13113 RSADLANPWRPQERPSYTEQGV 13178
Score = 57.9 bits (120), Expect(2) = 2e-055
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P MTV DIFVCILAFMPTGWGLLL++
Sbjct: 12781 PHMTVQDIFVCILAFMPTGWGLLLVS 12858
Score = 52.8 bits (109), Expect(2) = 5e-036
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -1 / -2
Query: 114 QQQTPSSGHESKDANKYVQHRHARDRY*DYHDGCSC 7
QQQTP+S HE K+ANK V H RD Y DY+DG C
Sbjct: 12852 QQQTPASWHEGKNANKDVLDCHMRDCYQDYNDGDKC 12745
Score = 50.6 bits (104), Expect(2) = 1e-027
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3 / +3
Query: 18 HRGNPNSDPWHDGAGHICLHPCFHAHWMGFA 110
H N +S+P +D GH+CLH C HA+W+G A
Sbjct: 12756 HHYNLDSNPSYDSPGHLCLHSCLHANWLGSA 12848
>gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005686, whole
genome shotgun sequence
Length = 38041
Score = 182 bits (392), Expect(2) = 2e-055
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +1 / +3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 7455 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 7634
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 7635 RGLQISRILGGHKKDRATRNKE* 7703
Score = 122 bits (261), Expect(2) = 5e-036
Identities = 54/82 (65%), Positives = 58/82 (70%)
Frame = -2 / -1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 7702 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 7523
Query: 182 XXXALIEPQSPVLWITGRIAWA 117
ALI+P +P+ ITG IA A
Sbjct: 7522 LASALIDPHNPMRTITGLIACA 7457
Score = 96.8 bits (205), Expect(2) = 1e-027
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +3 / +2
Query: 117 CPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGVQQ 296
C S A + +G+DQG+C G+ D G +H R+PRLVPV + +PDQ+A+QPG+QQ
Sbjct: 7457 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 7636
Query: 297 RSADLPYPGRTQERPRDPEQRI 362
RSADL P R QERP EQ +
Sbjct: 7637 RSADLANPWRPQERPSYTEQGV 7702
Score = 57.9 bits (120), Expect(2) = 2e-055
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1 / +3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P MTV DIFVCILAFMPTGWGLLL++
Sbjct: 7305 PHMTVQDIFVCILAFMPTGWGLLLVS 7382
Score = 52.8 bits (109), Expect(2) = 5e-036
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -1 / -3
Query: 114 QQQTPSSGHESKDANKYVQHRHARDRY*DYHDGCSC 7
QQQTP+S HE K+ANK V H RD Y DY+DG C
Sbjct: 7376 QQQTPASWHEGKNANKDVLDCHMRDCYQDYNDGDKC 7269
Score = 50.6 bits (104), Expect(2) = 1e-027
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3 / +2
Query: 18 HRGNPNSDPWHDGAGHICLHPCFHAHWMGFA 110
H N +S+P +D GH+CLH C HA+W+G A
Sbjct: 7280 HHYNLDSNPSYDSPGHLCLHSCLHANWLGSA 7372
>gb|CB642890.1|CB642890 OSJNEb03E21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03E21 3', mRNA sequence
Length = 769
Score = 193 bits (417), Expect = 1e-047
Identities = 76/98 (77%), Positives = 88/98 (89%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
MT+ DIFVC LAF+P+GWG+LLIAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI
Sbjct: 586 MTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPIT 407
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTRMLFNQAFSRGLQISRILGG KK+R
Sbjct: 406 ILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKER 293
>gb|CB677903.1|CB677903 OSJNEe15F12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15F12 3', mRNA sequence
Length = 804
Score = 193 bits (417), Expect = 1e-047
Identities = 76/98 (77%), Positives = 88/98 (89%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
MT+ DIFVC LAF+P+GWG+LLIAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI
Sbjct: 621 MTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPIT 442
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTRMLFNQAFSRGLQISRILGG KK+R
Sbjct: 441 ILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKER 328
>dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C02, full
insert sequence
Length = 2219
Score = 193 bits (417), Expect = 1e-047
Identities = 76/98 (77%), Positives = 88/98 (89%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
MT+ DIFVC LAF+P+GWG+LLIAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI
Sbjct: 1562 MTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPIT 1741
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTRMLFNQAFSRGLQISRILGG KK+R
Sbjct: 1742 ILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKER 1855
>dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-G07, full
insert sequence
Length = 1992
Score = 193 bits (417), Expect = 1e-047
Identities = 76/98 (77%), Positives = 88/98 (89%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
MT+ DIFVC LAF+P+GWG+LLIAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI
Sbjct: 1263 MTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPIT 1442
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTRMLFNQAFSRGLQISRILGG KK+R
Sbjct: 1443 ILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKER 1556
>ref|NM_187591.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 4929
Score = 193 bits (417), Expect = 1e-047
Identities = 76/98 (77%), Positives = 88/98 (89%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
MT+ DIFVC LAF+P+GWG+LLIAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI
Sbjct: 4609 MTLRDIFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPIT 4788
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTRMLFNQAFSRGLQISRILGG KK+R
Sbjct: 4789 ILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKER 4902
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 182 bits (392), Expect = 4e-044
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +1 / +2
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 22451564 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 22451743
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 22451744 RGLQISRILGGHKKDRATRNKE* 22451812
Score = 122 bits (261), Expect = 4e-026
Identities = 54/82 (65%), Positives = 58/82 (70%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 22451811 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 22451632
Query: 182 XXXALIEPQSPVLWITGRIAWA 117
ALI+P +P+ ITG IA A
Sbjct: 22451631 LASALIDPHNPMRTITGLIACA 22451566
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 182 bits (392), Expect = 4e-044
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +1 / +1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 35904628 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 35904807
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 35904808 RGLQISRILGGHKKDRATRNKE* 35904876
Score = 122 bits (261), Expect = 4e-026
Identities = 54/82 (65%), Positives = 58/82 (70%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 35904875 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 35904696
Query: 182 XXXALIEPQSPVLWITGRIAWA 117
ALI+P +P+ ITG IA A
Sbjct: 35904695 LASALIDPHNPMRTITGLIACA 35904630
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 182 bits (392), Expect = 4e-044
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +1 / +3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
+AQAI+PVI + GLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 35822385 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 35822564
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 35822565 RGLQISRILGGHKKDRATRNKE* 35822633
Score = 122 bits (261), Expect = 4e-026
Identities = 54/82 (65%), Positives = 58/82 (70%)
Frame = -2 / -1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFL PPRIREICRPLL AWL SILVWNSDTNGNQAR A+GV
Sbjct: 35822632 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 35822453
Query: 182 XXXALIEPQSPVLWITGRIAWA 117
ALI+P +P+ ITG IA A
Sbjct: 35822452 LASALIDPHNPMRTITGLIACA 35822387
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 181 bits (390), Expect = 7e-044
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1 / -3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQAI+P + GLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 29548844 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 29548665
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 29548664 RGLQISRILGGHKKDRSTRNKE* 29548596
Score = 142 bits (305), Expect = 4e-032
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +1 / -2
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
I+QA +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 3910815 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 3910636
Query: 295 RGLQISRILGGHKKDRGTRNK 357
RGLQISRIL G KK R K
Sbjct: 3910635 RGLQISRILAGGKKQS*ARTK 3910573
Score = 137 bits (294), Expect = 1e-030
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3 / -2
Query: 111 ADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGV 290
+DC S C P WALG++QGSCPGL DP+GT +H H +P LV RV +PDQDA+QPG+
Sbjct: 29548848 SDCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGL 29548669
Query: 291 QQRSADLPYPGRTQERPRDPEQRI 362
QQRSADLPYP R QERP +PEQ +
Sbjct: 29548668 QQRSADLPYPWRAQERPINPEQGV 29548597
Score = 133 bits (286), Expect = 1e-029
Identities = 57/83 (68%), Positives = 60/83 (72%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFLCPPRIREICRPLL AWL SILVWNSDT GNQAR AMGVN
Sbjct: 29548597 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 29548776
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
ALI+PQSP+ W G +A AI
Sbjct: 29548777 RARALIDPQSPIAWTAGLMACAI 29548845
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 181 bits (390), Expect = 7e-044
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1 / -1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQAI+P + GLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 30518088 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 30517909
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGGHKKDR TRNKE*
Sbjct: 30517908 RGLQISRILGGHKKDRSTRNKE* 30517840
Score = 142 bits (305), Expect = 4e-032
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +1 / -2
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
I+QA +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 4078163 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 4077984
Query: 295 RGLQISRILGGHKKDRGTRNK 357
RGLQISRIL G KK R K
Sbjct: 4077983 RGLQISRILAGGKKQS*ARTK 4077921
Score = 137 bits (294), Expect = 1e-030
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3 / -3
Query: 111 ADCPSDPACDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLVPVRVGIPDQDAVQPGV 290
+DC S C P WALG++QGSCPGL DP+GT +H H +P LV RV +PDQDA+QPG+
Sbjct: 30518092 SDCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGL 30517913
Query: 291 QQRSADLPYPGRTQERPRDPEQRI 362
QQRSADLPYP R QERP +PEQ +
Sbjct: 30517912 QQRSADLPYPWRAQERPINPEQGV 30517841
Score = 133 bits (286), Expect = 1e-029
Identities = 57/83 (68%), Positives = 60/83 (72%)
Frame = -2 / +2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
YSLFRV RSFLCPPRIREICRPLL AWL SILVWNSDT GNQAR AMGVN
Sbjct: 30517841 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 30518020
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
ALI+PQSP+ W G +A AI
Sbjct: 30518021 RARALIDPQSPIAWTAGLMACAI 30518089
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 151 bits (324), Expect(2) = 4e-043
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / -3
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1568587 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1568408
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 1568407 AFSRGLQISRILGGQKKER 1568351
Score = 111 bits (236), Expect(2) = 5e-024
Identities = 42/80 (52%), Positives = 61/80 (76%)
Frame = +1 / +2
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
++ IA A +P++ K GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1052978 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1053157
Query: 286 AFSRGLQISRILGGHKKDRG 345
AFSRGL+IS IL G+ + G
Sbjct: 1053158 AFSRGLEISLILAGNNPNAG 1053217
Score = 47.8 bits (98), Expect(2) = 4e-043
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -2
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
MT+ DIFVC LAF+P+GWG+LL+
Sbjct: 1568726 MTLRDIFVCFLAFLPSGWGILLV 1568658
Score = 40.0 bits (81), Expect(2) = 5e-024
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIA 120
++V D+F ILAF+PTGWG+L ++
Sbjct: 1052269 LSVKDVFAAILAFVPTGWGVLSVS 1052340
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 151 bits (324), Expect(2) = 4e-043
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / -2
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1562531 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1562352
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 1562351 AFSRGLQISRILGGQKKER 1562295
Score = 111 bits (236), Expect(2) = 7e-025
Identities = 42/80 (52%), Positives = 61/80 (76%)
Frame = +1 / +3
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
++ IA A +P++ K GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1054800 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1054979
Query: 286 AFSRGLQISRILGGHKKDRG 345
AFSRGL+IS IL G+ + G
Sbjct: 1054980 AFSRGLEISLILAGNNPNAG 1055039
Score = 47.8 bits (98), Expect(2) = 4e-043
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
MT+ DIFVC LAF+P+GWG+LL+
Sbjct: 1562670 MTLRDIFVCFLAFLPSGWGILLV 1562602
Score = 40.0 bits (81), Expect(2) = 7e-025
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIA 120
++V D+F ILAF+PTGWG+L ++
Sbjct: 1054090 LSVKDVFAAILAFVPTGWGVLSVS 1054161
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
complete sequence
Length = 127098
Score = 151 bits (324), Expect(2) = 4e-043
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / -3
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 42094 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 41915
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 41914 AFSRGLQISRILGGQKKER 41858
Score = 47.8 bits (98), Expect(2) = 4e-043
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -2
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
MT+ DIFVC LAF+P+GWG+LL+
Sbjct: 42233 MTLRDIFVCFLAFLPSGWGILLV 42165
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07,
complete sequence
Length = 117612
Score = 151 bits (324), Expect(2) = 4e-043
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / -3
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 99706 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 99527
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 99526 AFSRGLQISRILGGQKKER 99470
Score = 47.8 bits (98), Expect(2) = 4e-043
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -2
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
MT+ DIFVC LAF+P+GWG+LL+
Sbjct: 99845 MTLRDIFVCFLAFLPSGWGILLV 99777
>gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005795, whole
genome shotgun sequence
Length = 23395
Score = 151 bits (324), Expect(2) = 4e-043
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / +1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 21340 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 21519
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 21520 AFSRGLQISRILGGQKKER 21576
Score = 47.8 bits (98), Expect(2) = 4e-043
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
MT+ DIFVC LAF+P+GWG+LL+
Sbjct: 21201 MTLRDIFVCFLAFLPSGWGILLV 21269
>dbj|AG209376.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE6034_0_502_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE6034, genomic survey sequence
Length = 777
Score = 151 bits (324), Expect(2) = 4e-043
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / -1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 366 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 187
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 186 AFSRGLQISRILGGQKKER 130
Score = 47.8 bits (98), Expect(2) = 4e-043
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -3
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
MT+ DIFVC LAF+P+GWG+LL+
Sbjct: 505 MTLRDIFVCFLAFLPSGWGILLV 437
>dbj|AG210594.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF2001_0_502_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF2001, genomic survey sequence
Length = 599
Score = 151 bits (324), Expect(2) = 4e-043
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / +1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 313 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 492
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 493 AFSRGLQISRILGGQKKER 549
Score = 47.8 bits (98), Expect(2) = 4e-043
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
MT+ DIFVC LAF+P+GWG+LL+
Sbjct: 174 MTLRDIFVCFLAFLPSGWGILLV 242
>gb|C24849.1|C24849 C24849 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S15947_1A, mRNA sequence
Length = 460
Score = 177 bits (380), Expect = 2e-042
Identities = 69/90 (76%), Positives = 79/90 (87%)
Frame = +1 / +3
Query: 73 CILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFV 252
C LAF+P+GWG+L IAQA +P+ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFV
Sbjct: 3 CFLAFLPSGWGILXIAQACKPLARXAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFV 182
Query: 253 SEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
SEFQTRMLFNQAFSRGLQISRILGG KK+R
Sbjct: 183 SEFQTRMLFNQAFSRGLQISRILGGQKKER 272
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 151 bits (324), Expect = 8e-035
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / -2
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1760949 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1760770
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 1760769 AFSRGLQISRILGGQKKER 1760713
Score = 111 bits (236), Expect = 1e-022
Identities = 42/80 (52%), Positives = 61/80 (76%)
Frame = +1 / +1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
++ IA A +P++ K GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1245340 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1245519
Query: 286 AFSRGLQISRILGGHKKDRG 345
AFSRGL+IS IL G+ + G
Sbjct: 1245520 AFSRGLEISLILAGNNPNAG 1245579
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 151 bits (324), Expect = 8e-035
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / -3
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1562531 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1562352
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 1562351 AFSRGLQISRILGGQKKER 1562295
Score = 111 bits (236), Expect = 1e-022
Identities = 42/80 (52%), Positives = 61/80 (76%)
Frame = +1 / +3
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
++ IA A +P++ K GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1054800 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1054979
Query: 286 AFSRGLQISRILGGHKKDRG 345
AFSRGL+IS IL G+ + G
Sbjct: 1054980 AFSRGLEISLILAGNNPNAG 1055039
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 151 bits (324), Expect = 8e-035
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1 / -2
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1562533 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1562354
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 1562353 AFSRGLQISRILGGQKKER 1562297
Score = 111 bits (236), Expect = 1e-022
Identities = 42/80 (52%), Positives = 61/80 (76%)
Frame = +1 / +2
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
++ IA A +P++ K GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1054802 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1054981
Query: 286 AFSRGLQISRILGGHKKDRG 345
AFSRGL+IS IL G+ + G
Sbjct: 1054982 AFSRGLEISLILAGNNPNAG 1055041
>dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0499E08, ***
SEQUENCING IN PROGRESS ***
Length = 85150
Score = 142 bits (305), Expect(2) = 3e-034
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +1 / -1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
I+QA +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 38953 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 38774
Query: 295 RGLQISRILGGHKKDRGTRNK 357
RGLQISRIL G KK R K
Sbjct: 38773 RGLQISRILAGGKKQS*ARTK 38711
Score = 35.4 bits (71), Expect(2) = 3e-034
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
+TV DIF LAF PTGW +L +
Sbjct: 40504 LTVGDIFASFLAFAPTGWAILQV 40436
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0019L07
Length = 131650
Score = 142 bits (305), Expect(2) = 5e-034
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +1 / -1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
I+QA +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 121816 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 121637
Query: 295 RGLQISRILGGHKKDRGTRNK 357
RGLQISRIL G KK R K
Sbjct: 121636 RGLQISRILAGGKKQS*ARTK 121574
Score = 35.4 bits (71), Expect(2) = 5e-034
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
+TV DIF LAF PTGW +L +
Sbjct: 123367 LTVGDIFASFLAFAPTGWAILQV 123299
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0036B04
Length = 136159
Score = 142 bits (305), Expect(2) = 5e-034
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +1 / -1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
I+QA +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 11422 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 11243
Query: 295 RGLQISRILGGHKKDRGTRNK 357
RGLQISRIL G KK R K
Sbjct: 11242 RGLQISRILAGGKKQS*ARTK 11180
Score = 35.4 bits (71), Expect(2) = 5e-034
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
+TV DIF LAF PTGW +L +
Sbjct: 12973 LTVGDIFASFLAFAPTGWAILQV 12905
>dbj|AG207902.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE0035_0_405_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE0035, genomic survey sequence
Length = 333
Score = 148 bits (318), Expect = 6e-034
Identities = 60/79 (75%), Positives = 68/79 (86%)
Frame = +1 / +1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR Y I+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 22 LFQIAQACKPLARRAGLWGSVRALARAYXIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 201
Query: 286 AFSRGLQISRILGGHKKDR 342
AFSRGLQISRILGG KK+R
Sbjct: 202 AFSRGLQISRILGGQKKER 258
>dbj|AG210620.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF2001_0_503_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF2001, genomic survey sequence
Length = 504
Score = 119 bits (254), Expect(2) = 2e-033
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +1 / +3
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 315 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 494
Query: 286 AFS 294
AFS
Sbjct: 495 AFS 503
Score = 47.8 bits (98), Expect(2) = 2e-033
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
MT+ DIFVC LAF+P+GWG+LL+
Sbjct: 176 MTLRDIFVCFLAFLPSGWGILLV 244
>ref|NM_187562.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 6168
Score = 145 bits (312), Expect = 4e-033
Identities = 55/100 (55%), Positives = 78/100 (78%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V D+F ILAF+PTGWG+L IA A +P++ K GLW ++++LAR Y+ G+++F PIA
Sbjct: 4561 LSVKDVFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIA 4740
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G+
Sbjct: 4741 IFSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAGS 4860
>gb|CB666398.1|CB666398 OSJNEd13E16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13E16 5', mRNA sequence
Length = 803
Score = 145 bits (311), Expect = 5e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V D+F ILAF+PTGWG+L IA A +P++ K GLW ++++LAR Y+ G+++F PIA
Sbjct: 214 LSVKDVFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIA 393
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 394 IFSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 510
>gb|CB666399.1|CB666399 OSJNEd13E16.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13E16 3', mRNA sequence
Length = 802
Score = 145 bits (311), Expect = 5e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / -3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V D+F ILAF+PTGWG+L IA A +P++ K GLW ++++LAR Y+ G+++F PIA
Sbjct: 599 LSVKDVFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIA 420
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 419 IFSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 303
>gb|CB671522.1|CB671522 OSJNEe05C09.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05C09 3', mRNA sequence
Length = 757
Score = 145 bits (311), Expect = 5e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V D+F ILAF+PTGWG+L IA A +P++ K GLW ++++LAR Y+ G+++F PIA
Sbjct: 553 LSVKDVFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIA 374
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 373 IFSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 257
>dbj|AK059373.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-F03, full
insert sequence
Length = 1245
Score = 145 bits (311), Expect = 5e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V D+F ILAF+PTGWG+L IA A +P++ K GLW ++++LAR Y+ G+++F PIA
Sbjct: 763 LSVKDVFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIA 942
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 943 IFSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 1059
>dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020O14, full
insert sequence
Length = 2087
Score = 145 bits (311), Expect = 5e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V D+F ILAF+PTGWG+L IA A +P++ K GLW ++++LAR Y+ G+++F PIA
Sbjct: 1531 LSVKDVFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIA 1710
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 1711 IFSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 1827
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 142 bits (305), Expect(2) = 3e-032
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +1 / -1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
I+QA +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 3910815 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 3910636
Query: 295 RGLQISRILGGHKKDRGTRNK 357
RGLQISRIL G KK R K
Sbjct: 3910635 RGLQISRILAGGKKQS*ARTK 3910573
Score = 35.4 bits (71), Expect(2) = 3e-032
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -2
Query: 49 MTVLDIFVCILAFMPTGWGLLLI 117
+TV DIF LAF PTGW +L +
Sbjct: 3912293 LTVGDIFASFLAFAPTGWAILQV 3912225
>gb|AACV01013161.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013161, whole
genome shotgun sequence
Length = 8989
Score = 142 bits (305), Expect = 4e-032
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +1 / +1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
I+QA +PV+ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 1228 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 1407
Query: 295 RGLQISRILGGHKKDRGTRNK 357
RGLQISRIL G KK R K
Sbjct: 1408 RGLQISRILAGGKKQS*ARTK 1470
>dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095O05, full
insert sequence
Length = 5774
Score = 141 bits (303), Expect = 7e-032
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = +1 / +1
Query: 55 VLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFL 234
++DIF +LAF+PTGWGL+ IAQ IRP I T +W S+ ++AR YEIL+G+ + P+AF
Sbjct: 5215 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGVFVMAPVAFF 5394
Query: 235 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
+W P E QTR+LFN+AFSRGLQISRIL G K
Sbjct: 5395 SWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 5493
>dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036H01, full
insert sequence
Length = 5949
Score = 141 bits (303), Expect = 7e-032
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = +1 / +1
Query: 55 VLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFL 234
++DIF +LAF+PTGWGL+ IAQ IRP I T +W S+ ++AR YEIL+G+ + P+AF
Sbjct: 5119 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGVFVMAPVAFF 5298
Query: 235 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
+W P E QTR+LFN+AFSRGLQISRIL G K
Sbjct: 5299 SWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 5397
>dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I17, full
insert sequence
Length = 5396
Score = 141 bits (303), Expect = 7e-032
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = +1 / +1
Query: 55 VLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFL 234
++DIF +LAF+PTGWGL+ IAQ IRP I T +W S+ ++AR YEIL+G+ + P+AF
Sbjct: 4804 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGVFVMAPVAFF 4983
Query: 235 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
+W P E QTR+LFN+AFSRGLQISRIL G K
Sbjct: 4984 SWLPGFQEMQTRVLFNEAFSRGLQISRILAGKK 5082
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,477,165,152
Number of Sequences: 438736
Number of extensions: 68157962
Number of successful extensions: 314029
Number of sequences better than 1.0e-020: 111
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 154289939770
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)