TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405117.2.2
(800 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 141 5e-064
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 141 5e-064
dbj|AP005445.3| Oryza sativa (japonica cultivar-group) geno... 141 5e-064
dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA... 141 5e-064
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 127 9e-054
gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) c... 127 1e-053
dbj|AP003771.2| Oryza sativa (japonica cultivar-group) geno... 121 2e-044
dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA... 121 2e-044
dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA... 121 2e-044
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 101 1e-035
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 101 1e-035
emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromoso... 101 1e-035
gb|AACV01010435.1| Oryza sativa (japonica cultivar-group) c... 101 1e-035
dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA... 101 1e-035
gb|AU075356.1|AU075356 AU075356 Rice callus Oryza sativa (j... 101 1e-035
ref|XM_473788.1| Oryza sativa (japonica cultivar-group), p... 101 6e-035
dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA... 94 1e-031
gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (j... 94 1e-031
dbj|AP004657.2| Oryza sativa (japonica cultivar-group) geno... 95 4e-031
dbj|AP003907.3| Oryza sativa (japonica cultivar-group) geno... 91 4e-031
dbj|AP004644.1| Oryza sativa (japonica cultivar-group) chro... 95 4e-031
gb|AACV01017705.1| Oryza sativa (japonica cultivar-group) c... 95 4e-031
ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA 91 7e-031
gb|CB644397.1|CB644397 OSJNEb05J12.r OSJNEb Oryza sativa (j... 91 2e-030
gb|CB651563.1|CB651563 OSJNEb16J04.r OSJNEb Oryza sativa (j... 92 3e-030
gb|CB648190.1|CB648190 OSJNEb11H13.r OSJNEb Oryza sativa (j... 94 3e-030
gb|AACV01010434.1| Oryza sativa (japonica cultivar-group) c... 95 6e-030
dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA... 95 6e-030
ref|XM_473787.1| Oryza sativa (japonica cultivar-group), p... 95 6e-030
gb|CB000335.1|CB000335 S345U_F07 Rice cold stress germinati... 87 6e-030
dbj|AP005249.3| Oryza sativa (japonica cultivar-group) geno... 95 1e-029
ref|XM_480899.1| Oryza sativa (japonica cultivar-group), mRNA 95 2e-029
gb|CF325411.1|CF325411 JMT1--03-C17.g1 AtJMT-overexpressing... 131 1e-028
gb|CB671695.1|CB671695 OSJNEe05G07.f OSJNEe Oryza sativa (j... 130 2e-028
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 127 2e-027
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 105 3e-027
ref|NT_107129.1| Oryza sativa (japonica cultivar-group) 105 3e-027
gb|AC134925.4| Oryza sativa (japonica cultivar-group) chrom... 105 3e-027
gb|AC136481.6| Oryza sativa (japonica cultivar-group) chrom... 105 3e-027
gb|AACV01023313.1| Oryza sativa (japonica cultivar-group) c... 105 3e-027
dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA... 105 3e-027
dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA... 105 3e-027
gb|CB655759.1|CB655759 OSJNEc09H12.r OSJNEc Oryza sativa (j... 82 2e-026
emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromoso... 90 9e-025
dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA... 82 1e-024
ref|XM_473793.1| Oryza sativa (japonica cultivar-group), p... 82 1e-024
gb|AACV01003896.1| Oryza sativa (japonica cultivar-group) c... 85 1e-023
gb|CA754118.1|CA754118 BR040009000_PLATE_F01_6_013.ab1 OA O... 113 3e-023
dbj|AP005398.3| Oryza sativa (japonica cultivar-group) geno... 85 8e-023
gb|CB658473.1|CB658473 OSJNEc14I12.r OSJNEc Oryza sativa (j... 71 3e-022
dbj|AP004705.3| Oryza sativa (japonica cultivar-group) geno... 72 9e-022
dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXR... 72 9e-022
dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA... 72 9e-022
ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-... 72 9e-022
dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA... 72 9e-022
ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA 72 9e-022
gb|CF304275.1|CF304275 ABF1--04-I16.g1 ABF3-overexpressing ... 72 1e-021
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 85 4e-021
gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) c... 69 4e-021
gb|AACV01010438.1| Oryza sativa (japonica cultivar-group) c... 90 4e-021
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 105 6e-021
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 105 6e-021
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 105 6e-021
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 85 7e-021
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 141 bits (303), Expect(2) = 5e-064
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2 / -2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDFRNLE KG+AFPK+QPMRLYSSL NADDWATQGGRVKTDW+HAPFSASYRGF+ADAC
Sbjct: 28773467 IRDFRNLEGKGIAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADAC 28773288
Score = 127 bits (272), Expect(2) = 5e-064
Identities = 49/70 (70%), Positives = 51/70 (72%)
Frame = +1 / -2
Query: 190 AGGRTRCGATVXXXXXXXXXXXXXXXDWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
AGGRTRCGATV WYNQELDLT QQRMRWVQ KYMIYNYCTDPKR+
Sbjct: 28773278 AGGRTRCGATVGTDAAPGTGAAAAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRF 28773099
Query: 370 QQGLPAECSM 399
QG+PAECSM
Sbjct: 28773098 PQGVPAECSM 28773069
Score = 121 bits (259), Expect = 9e-026
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E++GVAFPKSQPMR+Y+SL NADDWATQGGRVK DWS APF AS+R F ADAC
Sbjct: 28750291 IRDFKNHEARGVAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADAC 28750470
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 141 bits (303), Expect(2) = 5e-064
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2 / -1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDFRNLE KG+AFPK+QPMRLYSSL NADDWATQGGRVKTDW+HAPFSASYRGF+ADAC
Sbjct: 6238952 IRDFRNLEGKGIAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADAC 6238773
Score = 127 bits (272), Expect(2) = 5e-064
Identities = 49/70 (70%), Positives = 51/70 (72%)
Frame = +1 / -1
Query: 190 AGGRTRCGATVXXXXXXXXXXXXXXXDWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
AGGRTRCGATV WYNQELDLT QQRMRWVQ KYMIYNYCTDPKR+
Sbjct: 6238763 AGGRTRCGATVGTDAAPGTGAAAAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRF 6238584
Query: 370 QQGLPAECSM 399
QG+PAECSM
Sbjct: 6238583 PQGVPAECSM 6238554
Score = 121 bits (259), Expect(2) = 2e-044
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E++GVAFPKSQPMR+Y+SL NADDWATQGGRVK DWS APF AS+R F ADAC
Sbjct: 6215776 IRDFKNHEARGVAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADAC 6215955
Score = 101 bits (215), Expect(2) = 3e-042
Identities = 47/60 (78%), Positives = 48/60 (80%)
Frame = -3 / +1
Query: 180 QASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRKSLI 1
QASA PR*EAEKGA QSVLTRPPCVAQSSAF+RLE*S IGW GNA P SR KSLI
Sbjct: 6238774 QASARKPR*EAEKGACVQSVLTRPPCVAQSSAFHRLE*SLIGWFFGNAIPFPSRFLKSLI 6238953
Score = 95.0 bits (201), Expect(2) = 3e-042
Identities = 45/68 (66%), Positives = 45/68 (66%)
Frame = -1 / +1
Query: 404 YCMEHSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLYQXXXXXXXXXXXXXXX 225
Y MEHSAG P RLGSVQ*L*IMYL CT RIRCCRVRSSSWLY
Sbjct: 6238549 YHMEHSAGTPWGKRLGSVQ*L*IMYLLCTHRIRCCRVRSSSWLYHPPAAAAAPVPGAASV 6238728
Query: 224 PTVAPQRV 201
PTVAPQRV
Sbjct: 6238729 PTVAPQRV 6238752
Score = 94.5 bits (200), Expect(2) = 1e-023
Identities = 45/63 (71%), Positives = 47/63 (74%)
Frame = -3 / -1
Query: 189 DGXQASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRK 10
D QASAL R EA KGA QS LTRPPCVAQSSAF+RL +RIGWLLGNATP S K
Sbjct: 6215963 DQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYTRIGWLLGNATPRASWFLK 6215784
Query: 9 SLI 1
SLI
Sbjct: 6215783 SLI 6215775
Score = 93.6 bits (198), Expect(2) = 1e-031
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2 / +2
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y+SL +A++WATQGGRV+TDWS APF+ASYRG A C
Sbjct: 6227867 GVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 6228016
Score = 88.6 bits (187), Expect(2) = 9e-025
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGF 166
IR F+N E+ GV FP QP+ +++S+ NA++WATQGGRVKTDWS APF A+YR +
Sbjct: 6220699 IRVFKNNEAYGVPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 6220863
Score = 82.2 bits (173), Expect(2) = 2e-044
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1 / +1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
W+NQEL +RMRWVQRK+MIYNYCTD KR+ QG PAEC ++*
Sbjct: 6216046 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 6216180
Score = 67.0 bits (140), Expect(2) = 1e-031
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +2
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
Y Q+LD Q R+R VQR YMIYNYC D R+ QGLP EC+ +*
Sbjct: 6228065 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 6228196
Score = 49.2 bits (101), Expect(2) = 9e-025
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1 / +1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAEC 393
W + +D + WV+ YM Y+YC D KR+ PAEC
Sbjct: 6220936 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 6221058
Score = 39.1 bits (79), Expect(2) = 1e-023
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 392 HSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLY 273
HSAG P RL SVQ*L*IM CT +R + SSW +
Sbjct: 6216167 HSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 6216048
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0028E05
Length = 157631
Score = 141 bits (303), Expect(2) = 5e-064
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2 / -1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDFRNLE KG+AFPK+QPMRLYSSL NADDWATQGGRVKTDW+HAPFSASYRGF+ADAC
Sbjct: 81242 IRDFRNLEGKGIAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADAC 81063
Score = 127 bits (272), Expect(2) = 5e-064
Identities = 49/70 (70%), Positives = 51/70 (72%)
Frame = +1 / -1
Query: 190 AGGRTRCGATVXXXXXXXXXXXXXXXDWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
AGGRTRCGATV WYNQELDLT QQRMRWVQ KYMIYNYCTDPKR+
Sbjct: 81053 AGGRTRCGATVGTDAAPGTGAAAAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRF 80874
Query: 370 QQGLPAECSM 399
QG+PAECSM
Sbjct: 80873 PQGVPAECSM 80844
Score = 121 bits (259), Expect(2) = 2e-044
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E++GVAFPKSQPMR+Y+SL NADDWATQGGRVK DWS APF AS+R F ADAC
Sbjct: 58066 IRDFKNHEARGVAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADAC 58245
Score = 101 bits (215), Expect(2) = 3e-042
Identities = 47/60 (78%), Positives = 48/60 (80%)
Frame = -3 / +1
Query: 180 QASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRKSLI 1
QASA PR*EAEKGA QSVLTRPPCVAQSSAF+RLE*S IGW GNA P SR KSLI
Sbjct: 81064 QASARKPR*EAEKGACVQSVLTRPPCVAQSSAFHRLE*SLIGWFFGNAIPFPSRFLKSLI 81243
Score = 95.0 bits (201), Expect(2) = 3e-042
Identities = 45/68 (66%), Positives = 45/68 (66%)
Frame = -1 / +1
Query: 404 YCMEHSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLYQXXXXXXXXXXXXXXX 225
Y MEHSAG P RLGSVQ*L*IMYL CT RIRCCRVRSSSWLY
Sbjct: 80839 YHMEHSAGTPWGKRLGSVQ*L*IMYLLCTHRIRCCRVRSSSWLYHPPAAAAAPVPGAASV 81018
Query: 224 PTVAPQRV 201
PTVAPQRV
Sbjct: 81019 PTVAPQRV 81042
Score = 94.5 bits (200), Expect(2) = 2e-023
Identities = 45/63 (71%), Positives = 47/63 (74%)
Frame = -3 / -1
Query: 189 DGXQASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRK 10
D QASAL R EA KGA QS LTRPPCVAQSSAF+RL +RIGWLLGNATP S K
Sbjct: 58253 DQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYTRIGWLLGNATPRASWFLK 58074
Query: 9 SLI 1
SLI
Sbjct: 58073 SLI 58065
Score = 93.6 bits (198), Expect(2) = 1e-031
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2 / +2
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y+SL +A++WATQGGRV+TDWS APF+ASYRG A C
Sbjct: 70157 GVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 70306
Score = 88.6 bits (187), Expect(2) = 9e-025
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGF 166
IR F+N E+ GV FP QP+ +++S+ NA++WATQGGRVKTDWS APF A+YR +
Sbjct: 62989 IRVFKNNEAYGVPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 63153
Score = 82.2 bits (173), Expect(2) = 2e-044
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1 / +1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
W+NQEL +RMRWVQRK+MIYNYCTD KR+ QG PAEC ++*
Sbjct: 58336 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 58470
Score = 67.0 bits (140), Expect(2) = 1e-031
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +2
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
Y Q+LD Q R+R VQR YMIYNYC D R+ QGLP EC+ +*
Sbjct: 70355 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 70486
Score = 49.2 bits (101), Expect(2) = 9e-025
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1 / +1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAEC 393
W + +D + WV+ YM Y+YC D KR+ PAEC
Sbjct: 63226 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 63348
Score = 39.1 bits (79), Expect(2) = 2e-023
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 392 HSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLY 273
HSAG P RL SVQ*L*IM CT +R + SSW +
Sbjct: 58457 HSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 58338
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
insert sequence
Length = 1253
Score = 141 bits (303), Expect(2) = 5e-064
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDFRNLE KG+AFPK+QPMRLYSSL NADDWATQGGRVKTDW+HAPFSASYRGF+ADAC
Sbjct: 590 IRDFRNLEGKGIAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADAC 769
Score = 127 bits (272), Expect(2) = 5e-064
Identities = 49/70 (70%), Positives = 51/70 (72%)
Frame = +1 / +2
Query: 190 AGGRTRCGATVXXXXXXXXXXXXXXXDWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
AGGRTRCGATV WYNQELDLT QQRMRWVQ KYMIYNYCTDPKR+
Sbjct: 779 AGGRTRCGATVGTDAAPGTGAAAAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRF 958
Query: 370 QQGLPAECSM 399
QG+PAECSM
Sbjct: 959 PQGVPAECSM 988
Score = 101 bits (215), Expect(3) = 2e-042
Identities = 47/60 (78%), Positives = 48/60 (80%)
Frame = -3 / -3
Query: 180 QASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRKSLI 1
QASA PR*EAEKGA QSVLTRPPCVAQSSAF+RLE*S IGW GNA P SR KSLI
Sbjct: 768 QASARKPR*EAEKGACVQSVLTRPPCVAQSSAFHRLE*SLIGWFFGNAIPFPSRFLKSLI 589
Score = 95.0 bits (201), Expect(3) = 2e-042
Identities = 45/68 (66%), Positives = 45/68 (66%)
Frame = -1 / -3
Query: 404 YCMEHSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLYQXXXXXXXXXXXXXXX 225
Y MEHSAG P RLGSVQ*L*IMYL CT RIRCCRVRSSSWLY
Sbjct: 993 YHMEHSAGTPWGKRLGSVQ*L*IMYLLCTHRIRCCRVRSSSWLYHPPAAAAAPVPGAASV 814
Query: 224 PTVAPQRV 201
PTVAPQRV
Sbjct: 813 PTVAPQRV 790
Score = 24.0 bits (46), Expect(3) = 2e-042
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1 / -3
Query: 611 EFLTTTPRTHQLLRYKSSSPLFIYH 537
++LTT RT + + S LF YH
Sbjct: 1188 QWLTTKQRTKKNFTHHSYITLFFYH 1114
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 127 bits (272), Expect(4) = 9e-054
Identities = 49/70 (70%), Positives = 51/70 (72%)
Frame = +1 / -2
Query: 190 AGGRTRCGATVXXXXXXXXXXXXXXXDWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
AGGRTRCGATV WYNQELDLT QQRMRWVQ KYMIYNYCTDPKR+
Sbjct: 10151599 AGGRTRCGATVGTDAAPGTGAAAAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRF 10151420
Query: 370 QQGLPAECSM 399
QG+PAECSM
Sbjct: 10151419 PQGVPAECSM 10151390
Score = 121 bits (259), Expect(2) = 2e-044
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +2 / +3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E++GVAFPKSQPMR+Y+SL NADDWATQGGRVK DWS APF AS+R F ADAC
Sbjct: 10128609 IRDFKNHEARGVAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADAC 10128788
Score = 95.0 bits (201), Expect(4) = 8e-035
Identities = 45/68 (66%), Positives = 45/68 (66%)
Frame = -1 / +3
Query: 404 YCMEHSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLYQXXXXXXXXXXXXXXX 225
Y MEHSAG P RLGSVQ*L*IMYL CT RIRCCRVRSSSWLY
Sbjct: 10151385 YHMEHSAGTPWGKRLGSVQ*L*IMYLLCTHRIRCCRVRSSSWLYHPPAAAAAPVPGAASV 10151564
Query: 224 PTVAPQRV 201
PTVAPQRV
Sbjct: 10151565 PTVAPQRV 10151588
Score = 94.5 bits (200), Expect(2) = 1e-023
Identities = 45/63 (71%), Positives = 47/63 (74%)
Frame = -3 / -2
Query: 189 DGXQASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRK 10
D QASAL R EA KGA QS LTRPPCVAQSSAF+RL +RIGWLLGNATP S K
Sbjct: 10128796 DQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYTRIGWLLGNATPRASWFLK 10128617
Query: 9 SLI 1
SLI
Sbjct: 10128616 SLI 10128608
Score = 93.6 bits (198), Expect(2) = 1e-031
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2 / +1
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y+SL +A++WATQGGRV+TDWS APF+ASYRG A C
Sbjct: 10140700 GVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 10140849
Score = 88.6 bits (187), Expect(2) = 8e-025
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2 / +3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGF 166
IR F+N E+ GV FP QP+ +++S+ NA++WATQGGRVKTDWS APF A+YR +
Sbjct: 10133532 IRVFKNNEAYGVPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 10133696
Score = 82.2 bits (173), Expect(2) = 2e-044
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1 / +3
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
W+NQEL +RMRWVQRK+MIYNYCTD KR+ QG PAEC ++*
Sbjct: 10128879 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 10129013
Score = 71.2 bits (149), Expect(4) = 9e-054
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2 / -2
Query: 98 ATQGGRVKTDWSHAPFSASYRGFKADAC 181
ATQGGRVKTDW+HAPFSASYRGF+ADAC
Sbjct: 10151692 ATQGGRVKTDWTHAPFSASYRGFRADAC 10151609
Score = 67.0 bits (140), Expect(2) = 1e-031
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +1
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
Y Q+LD Q R+R VQR YMIYNYC D R+ QGLP EC+ +*
Sbjct: 10140898 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 10141029
Score = 53.8 bits (111), Expect(4) = 8e-035
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -3 / +3
Query: 180 QASALNPR*EAEKGAWDQSVLTRPPCVAQ 94
QASA PR*EAEKGA QSVLTRPPCVA+
Sbjct: 10151610 QASARKPR*EAEKGACVQSVLTRPPCVAR 10151696
Score = 49.2 bits (101), Expect(2) = 8e-025
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1 / +3
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAEC 393
W + +D + WV+ YM Y+YC D KR+ PAEC
Sbjct: 10133769 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 10133891
Score = 44.1 bits (90), Expect(4) = 9e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2 / -3
Query: 2 IRDFRNLESKGVAFPKSQP 58
IRDFRNLE KG+AFPK+QP
Sbjct: 10151790 IRDFRNLEGKGIAFPKNQP 10151734
Score = 39.1 bits (79), Expect(2) = 1e-023
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = -1 / -2
Query: 392 HSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLY 273
HSAG P RL SVQ*L*IM CT +R + SSW +
Sbjct: 10129000 HSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 10128881
Score = 30.4 bits (60), Expect(4) = 8e-035
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3 / +2
Query: 57 GWLLGNATPLLSRLRKSLI 1
GW GNA P SR KSLI
Sbjct: 10151735 GWFFGNAIPFPSRFLKSLI 10151791
Score = 28.6 bits (56), Expect(4) = 9e-054
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -3
Query: 58 DAALLQPVERGRLG 99
D ALLQPVER RLG
Sbjct: 10151733 DEALLQPVERRRLG 10151692
Score = 27.6 bits (54), Expect(4) = 8e-035
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / +3
Query: 121 LDAPALRRPVVRVQQAGVEPHR 56
L P VV V QAGVEPHR
Sbjct: 10151670 LTRPPCVARVVGVPQAGVEPHR 10151735
>gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014850, whole
genome shotgun sequence
Length = 60324
Score = 127 bits (272), Expect(4) = 1e-053
Identities = 49/70 (70%), Positives = 51/70 (72%)
Frame = +1 / +3
Query: 190 AGGRTRCGATVXXXXXXXXXXXXXXXDWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
AGGRTRCGATV WYNQELDLT QQRMRWVQ KYMIYNYCTDPKR+
Sbjct: 23052 AGGRTRCGATVGTDAAPGTGAAAAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRF 23231
Query: 370 QQGLPAECSM 399
QG+PAECSM
Sbjct: 23232 PQGVPAECSM 23261
Score = 121 bits (259), Expect(2) = 2e-044
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +2 / -3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E++GVAFPKSQPMR+Y+SL NADDWATQGGRVK DWS APF AS+R F ADAC
Sbjct: 46042 IRDFKNHEARGVAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADAC 45863
Score = 95.0 bits (201), Expect(4) = 9e-035
Identities = 45/68 (66%), Positives = 45/68 (66%)
Frame = -1 / -3
Query: 404 YCMEHSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLYQXXXXXXXXXXXXXXX 225
Y MEHSAG P RLGSVQ*L*IMYL CT RIRCCRVRSSSWLY
Sbjct: 23266 YHMEHSAGTPWGKRLGSVQ*L*IMYLLCTHRIRCCRVRSSSWLYHPPAAAAAPVPGAASV 23087
Query: 224 PTVAPQRV 201
PTVAPQRV
Sbjct: 23086 PTVAPQRV 23063
Score = 94.5 bits (200), Expect(2) = 2e-023
Identities = 45/63 (71%), Positives = 47/63 (74%)
Frame = -3 / +3
Query: 189 DGXQASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRK 10
D QASAL R EA KGA QS LTRPPCVAQSSAF+RL +RIGWLLGNATP S K
Sbjct: 45855 DQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYTRIGWLLGNATPRASWFLK 46034
Query: 9 SLI 1
SLI
Sbjct: 46035 SLI 46043
Score = 93.6 bits (198), Expect(2) = 1e-031
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2 / -1
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y+SL +A++WATQGGRV+TDWS APF+ASYRG A C
Sbjct: 33951 GVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 33802
Score = 88.6 bits (187), Expect(2) = 9e-025
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2 / -3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGF 166
IR F+N E+ GV FP QP+ +++S+ NA++WATQGGRVKTDWS APF A+YR +
Sbjct: 41119 IRVFKNNEAYGVPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 40955
Score = 82.2 bits (173), Expect(2) = 2e-044
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1 / -3
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
W+NQEL +RMRWVQRK+MIYNYCTD KR+ QG PAEC ++*
Sbjct: 45772 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 45638
Score = 71.2 bits (149), Expect(4) = 1e-053
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2 / +3
Query: 98 ATQGGRVKTDWSHAPFSASYRGFKADAC 181
ATQGGRVKTDW+HAPFSASYRGF+ADAC
Sbjct: 22959 ATQGGRVKTDWTHAPFSASYRGFRADAC 23042
Score = 67.0 bits (140), Expect(2) = 1e-031
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / -1
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
Y Q+LD Q R+R VQR YMIYNYC D R+ QGLP EC+ +*
Sbjct: 33753 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 33622
Score = 53.8 bits (111), Expect(4) = 9e-035
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -3 / -3
Query: 180 QASALNPR*EAEKGAWDQSVLTRPPCVAQ 94
QASA PR*EAEKGA QSVLTRPPCVA+
Sbjct: 23041 QASARKPR*EAEKGACVQSVLTRPPCVAR 22955
Score = 49.2 bits (101), Expect(2) = 9e-025
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1 / -3
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAEC 393
W + +D + WV+ YM Y+YC D KR+ PAEC
Sbjct: 40882 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 40760
Score = 44.1 bits (90), Expect(4) = 1e-053
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQP 58
IRDFRNLE KG+AFPK+QP
Sbjct: 22861 IRDFRNLEGKGIAFPKNQP 22917
Score = 39.1 bits (79), Expect(2) = 2e-023
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = -1 / +3
Query: 392 HSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLY 273
HSAG P RL SVQ*L*IM CT +R + SSW +
Sbjct: 45651 HSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 45770
Score = 30.4 bits (60), Expect(4) = 9e-035
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3 / -2
Query: 57 GWLLGNATPLLSRLRKSLI 1
GW GNA P SR KSLI
Sbjct: 22916 GWFFGNAIPFPSRFLKSLI 22860
Score = 28.6 bits (56), Expect(4) = 1e-053
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 58 DAALLQPVERGRLG 99
D ALLQPVER RLG
Sbjct: 22918 DEALLQPVERRRLG 22959
Score = 27.6 bits (54), Expect(4) = 9e-035
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / -3
Query: 121 LDAPALRRPVVRVQQAGVEPHR 56
L P VV V QAGVEPHR
Sbjct: 22981 LTRPPCVARVVGVPQAGVEPHR 22916
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0622F03
Length = 170064
Score = 121 bits (259), Expect(2) = 2e-044
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E++GVAFPKSQPMR+Y+SL NADDWATQGGRVK DWS APF AS+R F ADAC
Sbjct: 150857 IRDFKNHEARGVAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADAC 151036
Score = 94.5 bits (200), Expect(2) = 2e-023
Identities = 45/63 (71%), Positives = 47/63 (74%)
Frame = -3 / -1
Query: 189 DGXQASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRK 10
D QASAL R EA KGA QS LTRPPCVAQSSAF+RL +RIGWLLGNATP S K
Sbjct: 151044 DQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYTRIGWLLGNATPRASWFLK 150865
Query: 9 SLI 1
SLI
Sbjct: 150864 SLI 150856
Score = 93.6 bits (198), Expect(2) = 1e-031
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2 / +3
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y+SL +A++WATQGGRV+TDWS APF+ASYRG A C
Sbjct: 162948 GVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 163097
Score = 88.6 bits (187), Expect(2) = 9e-025
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGF 166
IR F+N E+ GV FP QP+ +++S+ NA++WATQGGRVKTDWS APF A+YR +
Sbjct: 155780 IRVFKNNEAYGVPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 155944
Score = 82.2 bits (173), Expect(2) = 2e-044
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1 / +2
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
W+NQEL +RMRWVQRK+MIYNYCTD KR+ QG PAEC ++*
Sbjct: 151127 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 151261
Score = 67.0 bits (140), Expect(2) = 1e-031
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
Y Q+LD Q R+R VQR YMIYNYC D R+ QGLP EC+ +*
Sbjct: 163146 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 163277
Score = 49.2 bits (101), Expect(2) = 9e-025
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1 / +2
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAEC 393
W + +D + WV+ YM Y+YC D KR+ PAEC
Sbjct: 156017 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 156139
Score = 39.1 bits (79), Expect(2) = 2e-023
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 392 HSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLY 273
HSAG P RL SVQ*L*IM CT +R + SSW +
Sbjct: 151248 HSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 151129
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
insert sequence
Length = 1208
Score = 121 bits (259), Expect(2) = 2e-044
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E++GVAFPKSQPMR+Y+SL NADDWATQGGRVK DWS APF AS+R F ADAC
Sbjct: 583 IRDFKNHEARGVAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADAC 762
Score = 94.5 bits (200), Expect(2) = 2e-023
Identities = 45/63 (71%), Positives = 47/63 (74%)
Frame = -3 / -1
Query: 189 DGXQASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRK 10
D QASAL R EA KGA QS LTRPPCVAQSSAF+RL +RIGWLLGNATP S K
Sbjct: 770 DQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYTRIGWLLGNATPRASWFLK 591
Query: 9 SLI 1
SLI
Sbjct: 590 SLI 582
Score = 82.2 bits (173), Expect(2) = 2e-044
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1 / +1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
W+NQEL +RMRWVQRK+MIYNYCTD KR+ QG PAEC ++*
Sbjct: 853 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 987
Score = 39.1 bits (79), Expect(2) = 2e-023
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 392 HSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLY 273
HSAG P RL SVQ*L*IM CT +R + SSW +
Sbjct: 974 HSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 855
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
insert sequence
Length = 1208
Score = 121 bits (259), Expect(2) = 2e-044
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E++GVAFPKSQPMR+Y+SL NADDWATQGGRVK DWS APF AS+R F ADAC
Sbjct: 583 IRDFKNHEARGVAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADAC 762
Score = 94.5 bits (200), Expect(2) = 2e-023
Identities = 45/63 (71%), Positives = 47/63 (74%)
Frame = -3 / -1
Query: 189 DGXQASALNPR*EAEKGAWDQSVLTRPPCVAQSSAFNRLE*SRIGWLLGNATPLLSRLRK 10
D QASAL R EA KGA QS LTRPPCVAQSSAF+RL +RIGWLLGNATP S K
Sbjct: 770 DQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYTRIGWLLGNATPRASWFLK 591
Query: 9 SLI 1
SLI
Sbjct: 590 SLI 582
Score = 82.2 bits (173), Expect(2) = 2e-044
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1 / +1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
W+NQEL +RMRWVQRK+MIYNYCTD KR+ QG PAEC ++*
Sbjct: 853 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 987
Score = 39.1 bits (79), Expect(2) = 2e-023
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 392 HSAGRPCW*RLGSVQ*L*IMYLRCTQRIRCCRVRSSSWLY 273
HSAG P RL SVQ*L*IM CT +R + SSW +
Sbjct: 974 HSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 855
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 101 bits (215), Expect(2) = 1e-035
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +2 / -1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKA 172
IR+ +N KG+A+P SQ MRLY SL NADDWATQGGRVKTDWS APF A YR F A
Sbjct: 8235312 IREMKNHADKGIAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 8235142
Score = 94.5 bits (200), Expect(2) = 6e-030
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = +2 / -1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N GV FP QPMRL+ L +ADDWAT+GGR+KTDWS APF A +R + AD C
Sbjct: 8226612 IRQFKNHLDSGVPFPIYQPMRLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGC 8226433
Score = 90.4 bits (191), Expect(2) = 4e-021
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +2 / +3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E +GV FP Q MR + SL +A+DWATQGGRVKTDW APF YR + C
Sbjct: 8269797 IRDFKNNEDQGVPFPTWQSMRTFGSLWSAEDWATQGGRVKTDWKQAPFVTYYRNYNVTWC 8269976
Score = 73.0 bits (153), Expect(2) = 1e-035
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1 / -1
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*RPVIPRPS 429
Y+Q++D T QQ M+W + YM+Y+YC D KR+ QG P ECSM * V R S
Sbjct: 8235108 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSMP*SGVETRQS 8234953
Score = 60.6 bits (126), Expect(2) = 6e-030
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1 / -1
Query: 289 DLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
D+ QQ++R Q KYMIYNYC DP+R+ G P EC +Q*
Sbjct: 8226357 DVKQQQQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 8226241
Score = 35.0 bits (70), Expect(2) = 4e-021
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1 / +3
Query: 283 ELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
+LD ++WV+ MIYNYC D R+
Sbjct: 8270034 DLDANTLSDLQWVRSNSMIYNYCDDSVRF 8270120
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 101 bits (215), Expect(2) = 1e-035
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +2 / -2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKA 172
IR+ +N KG+A+P SQ MRLY SL NADDWATQGGRVKTDWS APF A YR F A
Sbjct: 413223 IREMKNHADKGIAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 413053
Score = 94.5 bits (200), Expect(2) = 6e-030
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = +2 / -3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N GV FP QPMRL+ L +ADDWAT+GGR+KTDWS APF A +R + AD C
Sbjct: 404615 IRQFKNHLDSGVPFPIYQPMRLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGC 404436
Score = 90.0 bits (190), Expect(2) = 6e-021
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +2 / +3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E +GV FP Q MR + SL +A+DWATQGGRVKTDW APF YR + C
Sbjct: 450267 IRDFKNNEDQGVPFPT*QSMRTFGSLWSAEDWATQGGRVKTDWKQAPFVTYYRNYNVTWC 450446
Score = 81.7 bits (172), Expect(2) = 9e-025
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +2 / -2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
+R F+N E+ GV +P Q MR+++SL N D WAT+GG+VK +W+ APF ASYR + AC
Sbjct: 451506 VRVFKNHEAAGVPYPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSAC 451327
Score = 73.0 bits (153), Expect(2) = 1e-035
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1 / -2
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*RPVIPRPS 429
Y+Q++D T QQ M+W + YM+Y+YC D KR+ QG P ECSM * V R S
Sbjct: 413019 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSMP*SGVETRQS 412864
Score = 60.6 bits (126), Expect(2) = 6e-030
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1 / -3
Query: 289 DLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
D+ QQ++R Q KYMIYNYC DP+R+ G P EC +Q*
Sbjct: 404360 DVKQQQQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 404244
Score = 56.1 bits (116), Expect(2) = 9e-025
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +1 / -2
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSM 399
W +++L ++ + W + YMIY+YC D R+ QGLPAECS+
Sbjct: 451227 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSL 451099
Score = 35.0 bits (70), Expect(2) = 6e-021
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1 / +3
Query: 283 ELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
+LD ++WV+ MIYNYC D R+
Sbjct: 450504 DLDANTLSDLQWVRSNSMIYNYCDDSVRF 450590
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
complete sequence
Length = 166804
Score = 101 bits (215), Expect(2) = 1e-035
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +2 / -2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKA 172
IR+ +N KG+A+P SQ MRLY SL NADDWATQGGRVKTDWS APF A YR F A
Sbjct: 150090 IREMKNHADKGIAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 149920
Score = 94.5 bits (200), Expect(2) = 6e-030
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = +2 / -3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N GV FP QPMRL+ L +ADDWAT+GGR+KTDWS APF A +R + AD C
Sbjct: 141482 IRQFKNHLDSGVPFPIYQPMRLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGC 141303
Score = 73.0 bits (153), Expect(2) = 1e-035
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1 / -2
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*RPVIPRPS 429
Y+Q++D T QQ M+W + YM+Y+YC D KR+ QG P ECSM * V R S
Sbjct: 149886 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSMP*SGVETRQS 149731
Score = 60.6 bits (126), Expect(2) = 6e-030
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1 / -3
Query: 289 DLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
D+ QQ++R Q KYMIYNYC DP+R+ G P EC +Q*
Sbjct: 141227 DVKQQQQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 141111
>gb|AACV01010435.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010435, whole
genome shotgun sequence
Length = 5289
Score = 101 bits (215), Expect(2) = 1e-035
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKA 172
IR+ +N KG+A+P SQ MRLY SL NADDWATQGGRVKTDWS APF A YR F A
Sbjct: 4817 IREMKNHADKGIAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 4987
Score = 73.0 bits (153), Expect(2) = 1e-035
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1 / +2
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*RPVIPRPS 429
Y+Q++D T QQ M+W + YM+Y+YC D KR+ QG P ECSM * V R S
Sbjct: 5021 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSMP*SGVETRQS 5176
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full
insert sequence
Length = 1109
Score = 101 bits (215), Expect(2) = 1e-035
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKA 172
IR+ +N KG+A+P SQ MRLY SL NADDWATQGGRVKTDWS APF A YR F A
Sbjct: 577 IREMKNHADKGIAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 747
Score = 73.0 bits (153), Expect(2) = 1e-035
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1 / +1
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*RPVIPRPS 429
Y+Q++D T QQ M+W + YM+Y+YC D KR+ QG P ECSM * V R S
Sbjct: 781 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSMP*SGVETRQS 936
>gb|AU075356.1|AU075356 AU075356 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11264_12Z, mRNA sequence
Length = 636
Score = 101 bits (215), Expect(2) = 1e-035
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKA 172
IR+ +N KG+A+P SQ MRLY SL NADDWATQGGRVKTDWS APF A YR F A
Sbjct: 65 IREMKNHPXKGIAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 235
Score = 73.0 bits (153), Expect(2) = 1e-035
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1 / +2
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*RPVIPRPS 429
Y+Q++D T QQ M+W + YM+Y+YC D KR+ QG P ECSM * V R S
Sbjct: 269 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSMP*SGVETRQS 424
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 822
Score = 101 bits (215), Expect(2) = 6e-035
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKA 172
IR+ +N KG+A+P SQ MRLY SL NADDWATQGGRVKTDWS APF A YR F A
Sbjct: 487 IREMKNHADKGIAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 657
Score = 70.7 bits (148), Expect(2) = 6e-035
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSM 399
Y+Q++D T QQ M+W + YM+Y+YC D KR+ QG P ECSM
Sbjct: 691 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSM 816
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full
insert sequence
Length = 1101
Score = 93.6 bits (198), Expect(2) = 1e-031
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2 / +2
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y+SL +A++WATQGGRV+TDWS APF+ASYRG A C
Sbjct: 614 GVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 763
Score = 67.0 bits (140), Expect(2) = 1e-031
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +2
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
Y Q+LD Q R+R VQR YMIYNYC D R+ QGLP EC+ +*
Sbjct: 812 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 943
>gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15H04 3', mRNA sequence
Length = 705
Score = 93.6 bits (198), Expect(2) = 1e-031
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2 / -2
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y+SL +A++WATQGGRV+TDWS APF+ASYRG A C
Sbjct: 488 GVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 339
Score = 67.0 bits (140), Expect(2) = 1e-031
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / -2
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
Y Q+LD Q R+R VQR YMIYNYC D R+ QGLP EC+ +*
Sbjct: 290 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 159
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0031C02
Length = 138843
Score = 95.5 bits (202), Expect(2) = 1e-029
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N + FP QPMRLY+S+ +ADDWATQGGR+KTDWS APF+A +R ++A+AC
Sbjct: 18151 IRQMKNQLRNDIPFPLYQPMRLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANAC 18330
Score = 91.3 bits (193), Expect(2) = 4e-031
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N V +P QPMR+Y S+ NADDWAT GGRVKTDWS APF+A +R ++A AC
Sbjct: 12623 IRQIKNNLMYSVPYPTYQPMRVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 12802
Score = 68.0 bits (142), Expect(2) = 4e-031
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = +1 / +2
Query: 268 DWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*R 408
+W+NQELD+T +Q+++ V Y IY+YCTD KR++ LP EC++ *+
Sbjct: 12845 NWFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN*K 12985
Score = 58.8 bits (122), Expect(2) = 1e-029
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +1 / +1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*R 408
W+ Q+LD +Q+++ V Y IY+YCTD +RY G P EC Q*+
Sbjct: 18382 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPECGSQ*K 18519
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1217_D10
Length = 103188
Score = 91.3 bits (193), Expect(2) = 4e-031
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N V +P QPMR+Y S+ NADDWAT GGRVKTDWS APF+A +R ++A AC
Sbjct: 98797 IRQIKNNLMYSVPYPTYQPMRVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 98976
Score = 68.0 bits (142), Expect(2) = 4e-031
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = +1 / +1
Query: 268 DWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*R 408
+W+NQELD+T +Q+++ V Y IY+YCTD KR++ LP EC++ *+
Sbjct: 99019 NWFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN*K 99159
>dbj|AP004644.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone OJ1117_B06,
*** SEQUENCING IN PROGRESS ***
Length = 95739
Score = 95.5 bits (202), Expect(2) = 1e-029
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +2 / -1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N + FP QPMRLY+S+ +ADDWATQGGR+KTDWS APF+A +R ++A+AC
Sbjct: 18723 IRQMKNQLRNDIPFPLYQPMRLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANAC 18544
Score = 91.3 bits (193), Expect(2) = 4e-031
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +2 / -2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N V +P QPMR+Y S+ NADDWAT GGRVKTDWS APF+A +R ++A AC
Sbjct: 24251 IRQIKNNLMYSVPYPTYQPMRVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 24072
Score = 68.0 bits (142), Expect(2) = 4e-031
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = +1 / -2
Query: 268 DWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*R 408
+W+NQELD+T +Q+++ V Y IY+YCTD KR++ LP EC++ *+
Sbjct: 24029 NWFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN*K 23889
Score = 58.8 bits (122), Expect(2) = 1e-029
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +1 / -1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*R 408
W+ Q+LD +Q+++ V Y IY+YCTD +RY G P EC Q*+
Sbjct: 18492 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPECGSQ*K 18355
>gb|AACV01017705.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017705, whole
genome shotgun sequence
Length = 21797
Score = 95.5 bits (202), Expect(2) = 1e-029
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +2 / -1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N + FP QPMRLY+S+ +ADDWATQGGR+KTDWS APF+A +R ++A+AC
Sbjct: 4220 IRQMKNQLRNDIPFPLYQPMRLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANAC 4041
Score = 91.3 bits (193), Expect(2) = 4e-031
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +2 / -2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N V +P QPMR+Y S+ NADDWAT GGRVKTDWS APF+A +R ++A AC
Sbjct: 9748 IRQIKNNLMYSVPYPTYQPMRVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 9569
Score = 68.0 bits (142), Expect(2) = 4e-031
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = +1 / -2
Query: 268 DWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*R 408
+W+NQELD+T +Q+++ V Y IY+YCTD KR++ LP EC++ *+
Sbjct: 9526 NWFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN*K 9386
Score = 58.8 bits (122), Expect(2) = 1e-029
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +1 / -1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*R 408
W+ Q+LD +Q+++ V Y IY+YCTD +RY G P EC Q*+
Sbjct: 3989 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPECGSQ*K 3852
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 861
Score = 91.3 bits (193), Expect(2) = 7e-031
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N V +P QPMR+Y S+ NADDWAT GGRVKTDWS APF+A +R ++A AC
Sbjct: 502 IRQIKNNLMYSVPYPTYQPMRVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 681
Score = 67.0 bits (140), Expect(2) = 7e-031
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = +1 / +1
Query: 268 DWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
+W+NQELD+T +Q+++ V Y IY+YCTD KR++ LP EC++ *
Sbjct: 724 NWFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN* 861
>gb|CB644397.1|CB644397 OSJNEb05J12.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05J12 3', mRNA sequence
Length = 635
Score = 90.9 bits (192), Expect(2) = 2e-030
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +2 / -3
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y+SL +A++WATQGGRV+TDWS APF+A YRG A C
Sbjct: 513 GVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTALYRGLAASGC 364
Score = 66.1 bits (138), Expect(2) = 2e-030
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = +1 / -3
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAEC 393
Y Q+LD Q R+R VQR YMIYNYC D R+ QGLP EC
Sbjct: 315 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPEC 196
>gb|CB651563.1|CB651563 OSJNEb16J04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16J04 3', mRNA sequence
Length = 728
Score = 92.3 bits (195), Expect(2) = 3e-030
Identities = 33/50 (66%), Positives = 43/50 (86%)
Frame = +2 / -1
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y++L +A++WATQGGRV+TDWS APF+ASYRG A C
Sbjct: 527 GVAFPRAQAMRVYATLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 378
Score = 64.3 bits (134), Expect(2) = 3e-030
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +1 / -1
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAEC 393
Y Q+LD Q R+R VQR YMIYNYC D R+ QG P EC
Sbjct: 329 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGFPPEC 210
>gb|CB648190.1|CB648190 OSJNEb11H13.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11H13 3', mRNA sequence
Length = 709
Score = 93.6 bits (198), Expect(2) = 3e-030
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2 / -2
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y+SL +A++WATQGGRV+TDWS APF+ASYRG A C
Sbjct: 561 GVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 412
Score = 62.9 bits (131), Expect(2) = 3e-030
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +1 / -2
Query: 274 YNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
Y Q+LD Q R+R VQR MIYNYC D R+ QGLP EC+ +*
Sbjct: 363 YQQQLDSASQDRLRQVQRDSMIYNYCADTYRFPQGLPPECTAK* 232
>gb|AACV01010434.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010434, whole
genome shotgun sequence
Length = 26704
Score = 94.5 bits (200), Expect(2) = 6e-030
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = +2 / -1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N GV FP QPMRL+ L +ADDWAT+GGR+KTDWS APF A +R + AD C
Sbjct: 18577 IRQFKNHLDSGVPFPIYQPMRLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGC 18398
Score = 60.6 bits (126), Expect(2) = 6e-030
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1 / -1
Query: 289 DLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
D+ QQ++R Q KYMIYNYC DP+R+ G P EC +Q*
Sbjct: 18322 DVKQQQQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 18206
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full
insert sequence
Length = 1041
Score = 94.5 bits (200), Expect(2) = 6e-030
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N GV FP QPMRL+ L +ADDWAT+GGR+KTDWS APF A +R + AD C
Sbjct: 574 IRQFKNHLDSGVPFPIYQPMRLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGC 753
Score = 60.6 bits (126), Expect(2) = 6e-030
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1 / +1
Query: 289 DLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
D+ QQ++R Q KYMIYNYC DP+R+ G P EC +Q*
Sbjct: 829 DVKQQQQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 945
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 882
Score = 94.5 bits (200), Expect(2) = 6e-030
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N GV FP QPMRL+ L +ADDWAT+GGR+KTDWS APF A +R + AD C
Sbjct: 511 IRQFKNHLDSGVPFPIYQPMRLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGC 690
Score = 60.6 bits (126), Expect(2) = 6e-030
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1 / +1
Query: 289 DLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
D+ QQ++R Q KYMIYNYC DP+R+ G P EC +Q*
Sbjct: 766 DVKQQQQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 882
>gb|CB000335.1|CB000335 S345U_F07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 573
Score = 87.2 bits (184), Expect(2) = 6e-030
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = +2 / +2
Query: 5 RDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
R +N V +P QPMR+Y + NADDWAT GGRVKTDWS APF+A +R ++A AC
Sbjct: 47 RQIKNNLMYSVPYPTYQPMRVYGRIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 223
Score = 68.0 bits (142), Expect(2) = 6e-030
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = +1 / +2
Query: 268 DWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*R 408
+W+NQELD+T +Q+++ V Y IY+YCTD KR++ LP EC++ *+
Sbjct: 266 NWFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN*K 406
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
BAC clone:OSJNBa0087F21
Length = 187401
Score = 95.5 bits (202), Expect(2) = 1e-029
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +2 / +3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N + FP QPMRLY+S+ +ADDWATQGGR+KTDWS APF+A +R ++A+AC
Sbjct: 519 IRQMKNQLRNDIPFPLYQPMRLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANAC 698
Score = 58.8 bits (122), Expect(2) = 1e-029
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +1 / +3
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ*R 408
W+ Q+LD +Q+++ V Y IY+YCTD +RY G P EC Q*+
Sbjct: 750 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPECGSQ*K 887
>ref|XM_480899.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 873
Score = 95.5 bits (202), Expect(2) = 2e-029
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR +N + FP QPMRLY+S+ +ADDWATQGGR+KTDWS APF+A +R ++A+AC
Sbjct: 508 IRQMKNQLRNDIPFPLYQPMRLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANAC 687
Score = 57.9 bits (120), Expect(2) = 2e-029
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1 / +1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSMQ* 405
W+ Q+LD +Q+++ V Y IY+YCTD +RY G P EC Q*
Sbjct: 739 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPECGSQ* 873
>gb|CF325411.1|CF325411 JMT1--03-C17.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--03-C17, mRNA sequence
Length = 475
Score = 131 bits (280), Expect = 1e-028
Identities = 50/56 (89%), Positives = 54/56 (96%)
Frame = +2 / +3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFK 169
IRDFRNLE KG+AFPK+QPMRLYSSL NADDWATQGGRVKTDW+HAPFSASYRGF+
Sbjct: 306 IRDFRNLEGKGIAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFR 473
>gb|CB671695.1|CB671695 OSJNEe05G07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05G07 5', mRNA sequence
Length = 753
Score = 130 bits (279), Expect = 2e-028
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKA 172
IRDFRNLE KG+AFPK+QPMRLYSSL NADDWAT GGRVKTDW+HAPFSASYRGF+A
Sbjct: 581 IRDFRNLEGKGIAFPKNQPMRLYSSLWNADDWATHGGRVKTDWTHAPFSASYRGFRA 751
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 127 bits (272), Expect = 2e-027
Identities = 49/70 (70%), Positives = 51/70 (72%)
Frame = +1 / -1
Query: 190 AGGRTRCGATVXXXXXXXXXXXXXXXDWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
AGGRTRCGATV WYNQELDLT QQRMRWVQ KYMIYNYCTDPKR+
Sbjct: 27850336 AGGRTRCGATVGTDAAPGTGAAAAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRF 27850157
Query: 370 QQGLPAECSM 399
QG+PAECSM
Sbjct: 27850156 PQGVPAECSM 27850127
Score = 121 bits (259), Expect = 9e-026
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +2 / +3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E++GVAFPKSQPMR+Y+SL NADDWATQGGRVK DWS APF AS+R F ADAC
Sbjct: 27827346 IRDFKNHEARGVAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADAC 27827525
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101 genomic
scaffold, whole genome shotgun sequence
Length = 5106408
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N + GV +P +QPM+LYSSL NADDWAT+GGR KTDWS APF ASYRGF D C
Sbjct: 1720931 IRVFKNSKDLGVRYPFNQPMKLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 1721110
Score = 40.5 bits (82), Expect(2) = 3e-027
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 280 QELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
++LD +R+ WV++ + IYNYC D +RY
Sbjct: 1721177 RDLDADQYRRLAWVRKTHTIYNYCDDRERY 1721266
>ref|NT_107129.1| Oryza sativa (japonica cultivar-group)
Length = 234310
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N + GV +P +QPM+LYSSL NADDWAT+GGR KTDWS APF ASYRGF D C
Sbjct: 115403 IRVFKNSKDLGVRYPFNQPMKLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 115582
Score = 40.5 bits (82), Expect(2) = 3e-027
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 280 QELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
++LD +R+ WV++ + IYNYC D +RY
Sbjct: 115649 RDLDADQYRRLAWVRKTHTIYNYCDDRERY 115738
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17,
complete sequence
Length = 148829
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N + GV +P +QPM+LYSSL NADDWAT+GGR KTDWS APF ASYRGF D C
Sbjct: 115403 IRVFKNSKDLGVRYPFNQPMKLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 115582
Score = 40.5 bits (82), Expect(2) = 3e-027
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 280 QELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
++LD +R+ WV++ + IYNYC D +RY
Sbjct: 115649 RDLDADQYRRLAWVRKTHTIYNYCDDRERY 115738
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0007D07, complete sequence
Length = 133930
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N + GV +P +QPM+LYSSL NADDWAT+GGR KTDWS APF ASYRGF D C
Sbjct: 15022 IRVFKNSKDLGVRYPFNQPMKLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 15201
Score = 40.5 bits (82), Expect(2) = 3e-027
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1 / +1
Query: 280 QELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
++LD +R+ WV++ + IYNYC D +RY
Sbjct: 15268 RDLDADQYRRLAWVRKTHTIYNYCDDRERY 15357
>gb|AACV01023313.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023313, whole
genome shotgun sequence
Length = 37775
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +2 / -1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N + GV +P +QPM+LYSSL NADDWAT+GGR KTDWS APF ASYRGF D C
Sbjct: 17174 IRVFKNSKDLGVRYPFNQPMKLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 16995
Score = 40.5 bits (82), Expect(2) = 3e-027
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1 / -1
Query: 280 QELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
++LD +R+ WV++ + IYNYC D +RY
Sbjct: 16928 RDLDADQYRRLAWVRKTHTIYNYCDDRERY 16839
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full
insert sequence
Length = 1053
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N + GV +P +QPM+LYSSL NADDWAT+GGR KTDWS APF ASYRGF D C
Sbjct: 535 IRVFKNSKDLGVRYPFNQPMKLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 714
Score = 40.5 bits (82), Expect(2) = 3e-027
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1 / +1
Query: 280 QELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
++LD +R+ WV++ + IYNYC D +RY
Sbjct: 781 RDLDADQYRRLAWVRKTHTIYNYCDDRERY 870
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full
insert sequence
Length = 977
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IR F+N + GV +P +QPM+LYSSL NADDWAT+GGR KTDWS APF ASYRGF D C
Sbjct: 538 IRVFKNSKDLGVRYPFNQPMKLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 717
Score = 40.5 bits (82), Expect(2) = 3e-027
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1 / +1
Query: 280 QELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
++LD +R+ WV++ + IYNYC D +RY
Sbjct: 784 RDLDADQYRRLAWVRKTHTIYNYCDDRERY 873
>gb|CB655759.1|CB655759 OSJNEc09H12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09H12 3', mRNA sequence
Length = 556
Score = 82.2 bits (173), Expect(2) = 2e-026
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = +2 / -3
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
GVAFP++Q MR+Y++L +A++WATQGGRV+TD S APF+AS RG A C
Sbjct: 527 GVAFPRAQAMRVYATLWDAEEWATQGGRVRTDCSRAPFTASSRGLPASGC 378
Score = 61.6 bits (128), Expect(2) = 2e-026
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +1 / -3
Query: 280 QELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAEC 393
Q+LD Q R+R VQR YMIYNYC D R+ QG P EC
Sbjct: 323 QQLDSASQARLRQVQRDYMIYNYCADTSRFPQGFPPEC 210
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
complete sequence
Length = 129037
Score = 90.0 bits (190), Expect(2) = 6e-021
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +2 / +2
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
IRDF+N E +GV FP Q MR + SL +A+DWATQGGRVKTDW APF YR + C
Sbjct: 29468 IRDFKNNEDQGVPFPT*QSMRTFGSLWSAEDWATQGGRVKTDWKQAPFVTYYRNYNVTWC 29647
Score = 81.7 bits (172), Expect(2) = 9e-025
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +2 / -3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
+R F+N E+ GV +P Q MR+++SL N D WAT+GG+VK +W+ APF ASYR + AC
Sbjct: 30707 VRVFKNHEAAGVPYPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSAC 30528
Score = 56.1 bits (116), Expect(2) = 9e-025
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +1 / -3
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSM 399
W +++L ++ + W + YMIY+YC D R+ QGLPAECS+
Sbjct: 30428 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSL 30300
Score = 35.0 bits (70), Expect(2) = 6e-021
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1 / +2
Query: 283 ELDLTLQQRMRWVQRKYMIYNYCTDPKRY 369
+LD ++WV+ MIYNYC D R+
Sbjct: 29705 DLDANTLSDLQWVRSNSMIYNYCDDSVRF 29791
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full
insert sequence
Length = 1234
Score = 81.7 bits (172), Expect(2) = 1e-024
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +2 / +3
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
+R F+N E+ GV +P Q MR+++SL N D WAT+GG+VK +W+ APF ASYR + AC
Sbjct: 600 VRVFKNHEAAGVPYPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSAC 779
Score = 56.1 bits (116), Expect(2) = 1e-024
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +1 / +3
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSM 399
W +++L ++ + W + YMIY+YC D R+ QGLPAECS+
Sbjct: 879 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSL 1007
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 966
Score = 81.7 bits (172), Expect(2) = 1e-024
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +2 / +1
Query: 2 IRDFRNLESKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
+R F+N E+ GV +P Q MR+++SL N D WAT+GG+VK +W+ APF ASYR + AC
Sbjct: 532 VRVFKNHEAAGVPYPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSAC 711
Score = 56.1 bits (116), Expect(2) = 1e-024
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +1 / +1
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAECSM 399
W +++L ++ + W + YMIY+YC D R+ QGLPAECS+
Sbjct: 811 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSL 939
>gb|AACV01003896.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003896, whole
genome shotgun sequence
Length = 22607
Score = 85.4 bits (180), Expect(2) = 1e-023
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = +2 / -3
Query: 26 SKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
S GVAFP QPM YSS+ A+DWATQ GRVKTDWS APF A+Y G D C
Sbjct: 8322 SNGVAFPTWQPMYAYSSIWAAEDWATQKGRVKTDWSKAPFVANYHGIDLDVC 8167
Score = 55.6 bits (115), Expect(2) = 1e-023
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 307 RMRWVQRKYMIYNYCTDPKRYQQGLPAECSM 399
RMR VQ +Y IYNYC DPKRY +P ECS+
Sbjct: 3599 RMRKVQDEYRIYNYCVDPKRYNGSVPVECSL 3507
>gb|CA754118.1|CA754118 BR040009000_PLATE_F01_6_013.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR040009000_PLATE_F01_6_013.ab1 similar to xyloglucan
endo-1,4-beta-D-glucanase (EC 3.2.1.-) - barley, mRNA
sequence
Length = 635
Score = 113 bits (241), Expect = 3e-023
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = +1 / +1
Query: 208 CGATVXXXXXXXXXXXXXXXDWYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPA 387
CGATV WYNQELDLT QQRMRWVQ KYMIYNYCTDPKR+ QG+PA
Sbjct: 1 CGATVGTDAAPGTGAAAAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPA 180
Query: 388 ECSM 399
ECSM
Sbjct: 181 ECSM 192
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0669G10
Length = 133372
Score = 85.4 bits (180), Expect(2) = 8e-023
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = +2 / +1
Query: 26 SKGVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
S GVAFP QPM YSS+ A+DWATQ GRVKTDWS APF A+Y G D C
Sbjct: 2233 SNGVAFPTWQPMYAYSSIWAAEDWATQKGRVKTDWSKAPFVANYHGIDLDVC 2388
Score = 55.6 bits (115), Expect(2) = 8e-023
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1 / +1
Query: 307 RMRWVQRKYMIYNYCTDPKRYQQGLPAECSM 399
RMR VQ +Y IYNYC DPKRY +P ECS+
Sbjct: 6955 RMRKVQDEYRIYNYCVDPKRYNGSVPVECSL 7047
>gb|CB658473.1|CB658473 OSJNEc14I12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14I12 3', mRNA sequence
Length = 595
Score = 71.2 bits (149), Expect(2) = 3e-022
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +2 / -3
Query: 32 GVAFPKSQPMRLYSSLLNADDWATQGGRVKTDWSHAPFSASYRGFKADAC 181
G+A+P+S+PMRL+ +L + WAT+ G VK DWS APF SYRG+ + C
Sbjct: 542 GLAYPQSKPMRLHVTLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNGC 393
Score = 58.3 bits (121), Expect(2) = 3e-022
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +1 / -3
Query: 271 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYQQGLPAEC 393
W ++ELD + W +RKYM YNYC D R+ QG PAEC
Sbjct: 332 WIHRELDGAELGTVAWAERKYMSYNYCADGWRFPQGFPAEC 210
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,813,317,232
Number of Sequences: 438736
Number of extensions: 53651980
Number of successful extensions: 375471
Number of sequences better than 1.0e-020: 77
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 187870691367
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)