TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131612.2.1
(620 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB659584.1|CB659584 OSJNEc16L01.r OSJNEc Oryza sativa (j... 226 1e-057
dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA... 226 1e-057
gb|AY324384.1| Oryza sativa (japonica cultivar-group) callo... 225 3e-057
ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA 225 3e-057
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 184 6e-053
dbj|AP004082.3| Oryza sativa (japonica cultivar-group) geno... 184 7e-053
dbj|AP005290.2| Oryza sativa (japonica cultivar-group) geno... 184 7e-053
gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) c... 184 7e-053
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 183 9e-053
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 183 9e-053
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 183 9e-053
dbj|AP005750.3| Oryza sativa (japonica cultivar-group) geno... 183 9e-053
gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) c... 183 9e-053
gb|CB642890.1|CB642890 OSJNEb03E21.r OSJNEb Oryza sativa (j... 188 7e-046
gb|CB677903.1|CB677903 OSJNEe15F12.r OSJNEe Oryza sativa (j... 188 7e-046
dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA... 188 7e-046
dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA... 188 7e-046
ref|NM_187591.1| Oryza sativa (japonica cultivar-group), p... 188 7e-046
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 184 9e-045
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 184 9e-045
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 184 9e-045
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 183 1e-044
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 183 1e-044
gb|C24849.1|C24849 C24849 Rice green shoot Oryza sativa (ja... 177 1e-042
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 152 2e-041
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 152 2e-041
gb|AC144426.1| Oryza sativa (japonica cultivar-group) chrom... 152 2e-041
gb|AC104427.2| Oryza sativa (japonica cultivar-group) chrom... 152 2e-041
gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) c... 152 2e-041
dbj|AG209376.1| Oryza sativa (japonica cultivar-group) DNA,... 152 2e-041
dbj|AG210594.1| Oryza sativa (japonica cultivar-group) DNA,... 152 2e-041
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 152 4e-035
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 152 4e-035
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 152 4e-035
dbj|AG207902.1| Oryza sativa (japonica cultivar-group) DNA,... 149 3e-034
dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chro... 144 3e-033
dbj|AP007257.2| Oryza sativa (japonica cultivar-group) geno... 144 5e-033
dbj|AP007226.1| Oryza sativa (japonica cultivar-group) geno... 144 5e-033
gb|AACV01013161.1| Oryza sativa (japonica cultivar-group) c... 144 6e-033
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 144 6e-033
ref|NM_187562.1| Oryza sativa (japonica cultivar-group), p... 143 2e-032
gb|CB666398.1|CB666398 OSJNEd13E16.f OSJNEd Oryza sativa (j... 142 3e-032
gb|CB666399.1|CB666399 OSJNEd13E16.r OSJNEd Oryza sativa (j... 142 3e-032
gb|CB671522.1|CB671522 OSJNEe05C09.r OSJNEe Oryza sativa (j... 142 3e-032
dbj|AK059373.1| Oryza sativa (japonica cultivar-group) cDNA... 142 3e-032
dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA... 142 3e-032
dbj|AG210620.1| Oryza sativa (japonica cultivar-group) DNA,... 119 1e-031
dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA... 134 7e-030
dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA... 134 7e-030
dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA... 134 7e-030
gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) c... 134 7e-030
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 134 7e-030
ref|NM_191270.1| Oryza sativa (japonica cultivar-group), p... 134 7e-030
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 134 7e-030
dbj|AP003249.3| Oryza sativa (japonica cultivar-group) geno... 134 7e-030
dbj|AP003268.4| Oryza sativa (japonica cultivar-group) geno... 134 7e-030
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 134 7e-030
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 134 7e-030
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 134 7e-030
ref|NM_193203.1| Oryza sativa (japonica cultivar-group), p... 125 8e-029
gb|AACV01001409.1| Oryza sativa (japonica cultivar-group) c... 122 1e-028
dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA... 113 3e-028
dbj|AP003447.2| Oryza sativa (japonica cultivar-group) geno... 122 5e-028
ref|NM_193211.1| Oryza sativa (japonica cultivar-group), p... 116 4e-027
gb|CB684141.1|CB684141 OSJNEf13F24.r OSJNEf Oryza sativa (j... 122 3e-026
dbj|AK059569.1| Oryza sativa (japonica cultivar-group) cDNA... 122 3e-026
dbj|AK071856.1| Oryza sativa (japonica cultivar-group) cDNA... 122 3e-026
ref|XM_550490.1| Oryza sativa (japonica cultivar-group), mRNA 122 3e-026
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 122 3e-026
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 122 3e-026
dbj|AG207097.1| Oryza sativa (japonica cultivar-group) DNA,... 83 1e-025
gb|AACV01005773.1| Oryza sativa (japonica cultivar-group) c... 113 2e-025
gb|AC118980.2| Oryza sativa (japonica cultivar-group) chrom... 113 3e-025
gb|AACV01001413.1| Oryza sativa (japonica cultivar-group) c... 116 7e-025
dbj|AK099834.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-024
dbj|AP003445.2| Oryza sativa (japonica cultivar-group) geno... 116 3e-024
gb|AQ865628.1|AQ865628 nbeb0025D14r CUGI Rice BAC Library (... 112 4e-023
dbj|AB156041.1| Oryza sativa (japonica cultivar-group) DNA,... 110 1e-022
gb|CB662166.1|CB662166 OSJNEd05O23.f OSJNEd Oryza sativa (j... 105 5e-021
>gb|CB659584.1|CB659584 OSJNEc16L01.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16L01 3', mRNA sequence
Length = 760
Score = 226 bits (489), Expect = 1e-057
Identities = 97/115 (84%), Positives = 105/115 (91%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IFVCILAFMPTGWGLLL+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWF
Sbjct: 413 IFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWF 234
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE**GC*LKVRLSGVMSS 347
PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR TR+KE** + + V+SS
Sbjct: 233 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE**PVCHSLDMYSVVSS 69
Score = 167 bits (359), Expect = 1e-039
Identities = 75/116 (64%), Positives = 82/116 (70%)
Frame = -2 / +1
Query: 349 QDDITPDRRTFNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQAR 170
++D T + Q YYSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR
Sbjct: 67 EEDTTEYMSSEWQTGYYSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQAR 246
Query: 169 KAMGVNXXXXXXXXXXXXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
A+GV ALIDPH+P+ ITGLIA A S+P PVGMKARMQTKM
Sbjct: 247 NAIGVKSRSPMMISYPLASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKM 414
Score = 152 bits (327), Expect = 3e-035
Identities = 63/104 (60%), Positives = 74/104 (71%)
Frame = +2 / -2
Query: 2 HLCLHPCLHAHWMGFAPDCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLV 181
HLCLH CLHA+W+G A C SYQA + R VG+DQG+C G+ D +GA +H P LV
Sbjct: 414 HLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLV 235
Query: 182 PVRVRVPDQDAVQPGLQQRSADLPYPGRTQERPRDAEQGVVGLL 313
PV +RVPDQ+A+QPGLQQRSADL P R QERP EQGVV L
Sbjct: 234 PVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGVVACL 103
Score = 146 bits (313), Expect = 2e-033
Identities = 60/96 (62%), Positives = 78/96 (81%)
Frame = -1 / +3
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 126 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 305
Query: 110 LDRPPQPDLLNHRPDSLGNQEQTPSSGHEGKDANKD 3
LDR PQPD N+ DSL NQ+QTP+S HEGK+ANKD
Sbjct: 306 LDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKD 413
>dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F07, full
insert sequence
Length = 1292
Score = 226 bits (489), Expect = 1e-057
Identities = 97/115 (84%), Positives = 105/115 (91%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IFVCILAFMPTGWGLLL+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWF
Sbjct: 638 IFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWF 817
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE**GC*LKVRLSGVMSS 347
PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR TR+KE** + + V+SS
Sbjct: 818 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE**PVCHSLDMYSVVSS 982
Score = 167 bits (359), Expect = 1e-039
Identities = 75/116 (64%), Positives = 82/116 (70%)
Frame = -2 / -3
Query: 349 QDDITPDRRTFNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQAR 170
++D T + Q YYSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR
Sbjct: 984 EEDTTEYMSSEWQTGYYSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQAR 805
Query: 169 KAMGVNXXXXXXXXXXXXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
A+GV ALIDPH+P+ ITGLIA A S+P PVGMKARMQTKM
Sbjct: 804 NAIGVKSRSPMMISYPLASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKM 637
Score = 152 bits (327), Expect = 3e-035
Identities = 63/104 (60%), Positives = 74/104 (71%)
Frame = +2 / +1
Query: 2 HLCLHPCLHAHWMGFAPDCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLV 181
HLCLH CLHA+W+G A C SYQA + R VG+DQG+C G+ D +GA +H P LV
Sbjct: 637 HLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLV 816
Query: 182 PVRVRVPDQDAVQPGLQQRSADLPYPGRTQERPRDAEQGVVGLL 313
PV +RVPDQ+A+QPGLQQRSADL P R QERP EQGVV L
Sbjct: 817 PVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGVVACL 948
Score = 146 bits (313), Expect = 2e-033
Identities = 60/96 (62%), Positives = 78/96 (81%)
Frame = -1 / -2
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 925 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 746
Query: 110 LDRPPQPDLLNHRPDSLGNQEQTPSSGHEGKDANKD 3
LDR PQPD N+ DSL NQ+QTP+S HEGK+ANKD
Sbjct: 745 LDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKD 638
>gb|AY324384.1| Oryza sativa (japonica cultivar-group) callose synthase-like protein
mRNA, partial cds
Length = 2727
Score = 225 bits (486), Expect = 3e-057
Identities = 93/100 (93%), Positives = 98/100 (98%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IFVCILAFMPTGWGLLL+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWF
Sbjct: 2428 IFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWF 2607
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR TR+KE*
Sbjct: 2608 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 2727
Score = 162 bits (348), Expect = 4e-038
Identities = 71/100 (71%), Positives = 75/100 (75%)
Frame = -2 / -2
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
YSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR A+GV
Sbjct: 2726 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 2547
Query: 121 XXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
ALIDPH+P+ ITGLIA A S+P PVGMKARMQTKM
Sbjct: 2546 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKM 2427
Score = 149 bits (320), Expect = 3e-034
Identities = 61/100 (61%), Positives = 72/100 (72%)
Frame = +2 / +3
Query: 2 HLCLHPCLHAHWMGFAPDCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLV 181
HLCLH CLHA+W+G A C SYQA + R VG+DQG+C G+ D +GA +H P LV
Sbjct: 2427 HLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLV 2606
Query: 182 PVRVRVPDQDAVQPGLQQRSADLPYPGRTQERPRDAEQGV 301
PV +RVPDQ+A+QPGLQQRSADL P R QERP EQGV
Sbjct: 2607 PVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 2726
Score = 146 bits (313), Expect = 2e-033
Identities = 60/96 (62%), Positives = 78/96 (81%)
Frame = -1 / -1
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 2715 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 2536
Query: 110 LDRPPQPDLLNHRPDSLGNQEQTPSSGHEGKDANKD 3
LDR PQPD N+ DSL NQ+QTP+S HEGK+ANKD
Sbjct: 2535 LDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKD 2428
>ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5910
Score = 225 bits (486), Expect = 3e-057
Identities = 93/100 (93%), Positives = 98/100 (98%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IFVCILAFMPTGWGLLL+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWF
Sbjct: 5611 IFVCILAFMPTGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWF 5790
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR TR+KE*
Sbjct: 5791 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE* 5910
Score = 162 bits (348), Expect = 4e-038
Identities = 71/100 (71%), Positives = 75/100 (75%)
Frame = -2 / -2
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
YSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR A+GV
Sbjct: 5909 YSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQARNAIGVKSRSPMMISYP 5730
Query: 121 XXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
ALIDPH+P+ ITGLIA A S+P PVGMKARMQTKM
Sbjct: 5729 LASALIDPHNPMRTITGLIACATNSRPQPVGMKARMQTKM 5610
Score = 149 bits (320), Expect = 3e-034
Identities = 61/100 (61%), Positives = 72/100 (72%)
Frame = +2 / +3
Query: 2 HLCLHPCLHAHWMGFAPDCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLV 181
HLCLH CLHA+W+G A C SYQA + R VG+DQG+C G+ D +GA +H P LV
Sbjct: 5610 HLCLHSCLHANWLGSAVGCASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLV 5789
Query: 182 PVRVRVPDQDAVQPGLQQRSADLPYPGRTQERPRDAEQGV 301
PV +RVPDQ+A+QPGLQQRSADL P R QERP EQGV
Sbjct: 5790 PVCIRVPDQNALQPGLQQRSADLANPWRPQERPSYTEQGV 5909
Score = 146 bits (313), Expect = 2e-033
Identities = 60/96 (62%), Positives = 78/96 (81%)
Frame = -1 / -1
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 5898 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 5719
Query: 110 LDRPPQPDLLNHRPDSLGNQEQTPSSGHEGKDANKD 3
LDR PQPD N+ DSL NQ+QTP+S HEGK+ANKD
Sbjct: 5718 LDRSPQPDAHNYWLDSLRNQQQTPASWHEGKNANKD 5611
>ref|NT_107182.1| Oryza sativa (japonica cultivar-group)
Length = 1785023
Score = 184 bits (396), Expect(2) = 6e-053
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +3 / +2
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1657658 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 1657837
Query: 234 RGLQISRILGGHKKDRGTRSKE**GC*LKVRLSGVMSS 347
RGLQISRILGGHKKDR TR+KE** + + V+SS
Sbjct: 1657838 RGLQISRILGGHKKDRATRNKE**PVCHSLDMYSVVSS 1657951
Score = 133 bits (286), Expect(2) = 1e-034
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = -2 / -3
Query: 349 QDDITPDRRTFNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQAR 170
++D T + Q YYSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR
Sbjct: 1657953 EEDTTEYMSSEWQTGYYSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQAR 1657774
Query: 169 KAMGVNXXXXXXXXXXXXXALIDPHSPIF*ITGLIAWA 56
A+GV ALIDPH+P+ ITGLIA A
Sbjct: 1657773 NAIGVKSRSPMMISYPLASALIDPHNPMRTITGLIACA 1657660
Score = 117 bits (251), Expect(2) = 1e-030
Identities = 51/86 (59%), Positives = 60/86 (69%)
Frame = +2 / +1
Query: 56 CPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQQ 235
C SYQA + R VG+DQG+C G+ D +GA +H P LVPV +RVPDQ+A+QPGLQQ
Sbjct: 1657660 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 1657839
Query: 236 RSADLPYPGRTQERPRDAEQGVVGLL 313
RSADL P R QERP EQGVV L
Sbjct: 1657840 RSADLANPWRPQERPSYTEQGVVACL 1657917
Score = 113 bits (242), Expect(2) = 1e-028
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = -1 / -2
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 1657894 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 1657715
Query: 110 LDRPPQPDLLNHRPDSLGNQEQT 42
LDR PQPD N+ DSL N T
Sbjct: 1657714 LDRSPQPDAHNYWLDSLRNLNPT 1657646
Score = 47.3 bits (97), Expect(2) = 6e-053
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIA 59
IFVCILAFMPTGWGLLL++
Sbjct: 1657529 IFVCILAFMPTGWGLLLVS 1657585
Score = 39.1 bits (79), Expect(2) = 1e-030
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 2 HLCLHPCLHAHWMGFA 49
HLCLH CLHA+W+G A
Sbjct: 1657528 HLCLHSCLHANWLGSA 1657575
Score = 36.8 bits (74), Expect(2) = 1e-034
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 49 SKPHPVGMKARMQTKM 2
S+P PVGMKARMQTKM
Sbjct: 1657575 SRPQPVGMKARMQTKM 1657528
Score = 36.3 bits (73), Expect(2) = 1e-028
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1 / -2
Query: 53 QEQTPSSGHEGKDANKD 3
Q+QTP+S HEGK+ANKD
Sbjct: 1657579 QQQTPASWHEGKNANKD 1657529
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1149_C12
Length = 120743
Score = 184 bits (396), Expect(2) = 7e-053
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +3 / +1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 93100 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 93279
Query: 234 RGLQISRILGGHKKDRGTRSKE**GC*LKVRLSGVMSS 347
RGLQISRILGGHKKDR TR+KE** + + V+SS
Sbjct: 93280 RGLQISRILGGHKKDRATRNKE**PVCHSLDMYSVVSS 93393
Score = 133 bits (286), Expect(2) = 1e-034
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = -2 / -1
Query: 349 QDDITPDRRTFNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQAR 170
++D T + Q YYSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR
Sbjct: 93395 EEDTTEYMSSEWQTGYYSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQAR 93216
Query: 169 KAMGVNXXXXXXXXXXXXXALIDPHSPIF*ITGLIAWA 56
A+GV ALIDPH+P+ ITGLIA A
Sbjct: 93215 NAIGVKSRSPMMISYPLASALIDPHNPMRTITGLIACA 93102
Score = 117 bits (251), Expect(2) = 1e-030
Identities = 51/86 (59%), Positives = 60/86 (69%)
Frame = +2 / +3
Query: 56 CPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQQ 235
C SYQA + R VG+DQG+C G+ D +GA +H P LVPV +RVPDQ+A+QPGLQQ
Sbjct: 93102 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 93281
Query: 236 RSADLPYPGRTQERPRDAEQGVVGLL 313
RSADL P R QERP EQGVV L
Sbjct: 93282 RSADLANPWRPQERPSYTEQGVVACL 93359
Score = 113 bits (242), Expect(2) = 1e-028
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = -1 / -3
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 93336 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 93157
Query: 110 LDRPPQPDLLNHRPDSLGNQEQT 42
LDR PQPD N+ DSL N T
Sbjct: 93156 LDRSPQPDAHNYWLDSLRNLNPT 93088
Score = 47.3 bits (97), Expect(2) = 7e-053
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIA 59
IFVCILAFMPTGWGLLL++
Sbjct: 92971 IFVCILAFMPTGWGLLLVS 93027
Score = 39.1 bits (79), Expect(2) = 1e-030
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 2 HLCLHPCLHAHWMGFA 49
HLCLH CLHA+W+G A
Sbjct: 92970 HLCLHSCLHANWLGSA 93017
Score = 36.8 bits (74), Expect(2) = 1e-034
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 49 SKPHPVGMKARMQTKM 2
S+P PVGMKARMQTKM
Sbjct: 93017 SRPQPVGMKARMQTKM 92970
Score = 36.3 bits (73), Expect(2) = 1e-028
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1 / -3
Query: 53 QEQTPSSGHEGKDANKD 3
Q+QTP+S HEGK+ANKD
Sbjct: 93021 QQQTPASWHEGKNANKD 92971
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1282_E10
Length = 107284
Score = 184 bits (396), Expect(2) = 7e-053
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +3 / +1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 12931 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 13110
Query: 234 RGLQISRILGGHKKDRGTRSKE**GC*LKVRLSGVMSS 347
RGLQISRILGGHKKDR TR+KE** + + V+SS
Sbjct: 13111 RGLQISRILGGHKKDRATRNKE**PVCHSLDMYSVVSS 13224
Score = 133 bits (286), Expect(2) = 1e-034
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = -2 / -3
Query: 349 QDDITPDRRTFNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQAR 170
++D T + Q YYSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR
Sbjct: 13226 EEDTTEYMSSEWQTGYYSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQAR 13047
Query: 169 KAMGVNXXXXXXXXXXXXXALIDPHSPIF*ITGLIAWA 56
A+GV ALIDPH+P+ ITGLIA A
Sbjct: 13046 NAIGVKSRSPMMISYPLASALIDPHNPMRTITGLIACA 12933
Score = 117 bits (251), Expect(2) = 1e-030
Identities = 51/86 (59%), Positives = 60/86 (69%)
Frame = +2 / +3
Query: 56 CPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQQ 235
C SYQA + R VG+DQG+C G+ D +GA +H P LVPV +RVPDQ+A+QPGLQQ
Sbjct: 12933 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 13112
Query: 236 RSADLPYPGRTQERPRDAEQGVVGLL 313
RSADL P R QERP EQGVV L
Sbjct: 13113 RSADLANPWRPQERPSYTEQGVVACL 13190
Score = 113 bits (242), Expect(2) = 1e-028
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = -1 / -2
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 13167 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 12988
Query: 110 LDRPPQPDLLNHRPDSLGNQEQT 42
LDR PQPD N+ DSL N T
Sbjct: 12987 LDRSPQPDAHNYWLDSLRNLNPT 12919
Score = 47.3 bits (97), Expect(2) = 7e-053
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIA 59
IFVCILAFMPTGWGLLL++
Sbjct: 12802 IFVCILAFMPTGWGLLLVS 12858
Score = 39.1 bits (79), Expect(2) = 1e-030
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 2 HLCLHPCLHAHWMGFA 49
HLCLH CLHA+W+G A
Sbjct: 12801 HLCLHSCLHANWLGSA 12848
Score = 36.8 bits (74), Expect(2) = 1e-034
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 49 SKPHPVGMKARMQTKM 2
S+P PVGMKARMQTKM
Sbjct: 12848 SRPQPVGMKARMQTKM 12801
Score = 36.3 bits (73), Expect(2) = 1e-028
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1 / -2
Query: 53 QEQTPSSGHEGKDANKD 3
Q+QTP+S HEGK+ANKD
Sbjct: 12852 QQQTPASWHEGKNANKD 12802
>gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005686, whole
genome shotgun sequence
Length = 38041
Score = 184 bits (396), Expect(2) = 7e-053
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +3 / +3
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 7455 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 7634
Query: 234 RGLQISRILGGHKKDRGTRSKE**GC*LKVRLSGVMSS 347
RGLQISRILGGHKKDR TR+KE** + + V+SS
Sbjct: 7635 RGLQISRILGGHKKDRATRNKE**PVCHSLDMYSVVSS 7748
Score = 133 bits (286), Expect(2) = 1e-034
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = -2 / -1
Query: 349 QDDITPDRRTFNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQAR 170
++D T + Q YYSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR
Sbjct: 7750 EEDTTEYMSSEWQTGYYSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQAR 7571
Query: 169 KAMGVNXXXXXXXXXXXXXALIDPHSPIF*ITGLIAWA 56
A+GV ALIDPH+P+ ITGLIA A
Sbjct: 7570 NAIGVKSRSPMMISYPLASALIDPHNPMRTITGLIACA 7457
Score = 117 bits (251), Expect(2) = 1e-030
Identities = 51/86 (59%), Positives = 60/86 (69%)
Frame = +2 / +2
Query: 56 CPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQQ 235
C SYQA + R VG+DQG+C G+ D +GA +H P LVPV +RVPDQ+A+QPGLQQ
Sbjct: 7457 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 7636
Query: 236 RSADLPYPGRTQERPRDAEQGVVGLL 313
RSADL P R QERP EQGVV L
Sbjct: 7637 RSADLANPWRPQERPSYTEQGVVACL 7714
Score = 113 bits (242), Expect(2) = 1e-028
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = -1 / -3
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 7691 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 7512
Query: 110 LDRPPQPDLLNHRPDSLGNQEQT 42
LDR PQPD N+ DSL N T
Sbjct: 7511 LDRSPQPDAHNYWLDSLRNLNPT 7443
Score = 47.3 bits (97), Expect(2) = 7e-053
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIA 59
IFVCILAFMPTGWGLLL++
Sbjct: 7326 IFVCILAFMPTGWGLLLVS 7382
Score = 39.1 bits (79), Expect(2) = 1e-030
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2 / +2
Query: 2 HLCLHPCLHAHWMGFA 49
HLCLH CLHA+W+G A
Sbjct: 7325 HLCLHSCLHANWLGSA 7372
Score = 36.8 bits (74), Expect(2) = 1e-034
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 49 SKPHPVGMKARMQTKM 2
S+P PVGMKARMQTKM
Sbjct: 7372 SRPQPVGMKARMQTKM 7325
Score = 36.3 bits (73), Expect(2) = 1e-028
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1 / -3
Query: 53 QEQTPSSGHEGKDANKD 3
Q+QTP+S HEGK+ANKD
Sbjct: 7376 QQQTPASWHEGKNANKD 7326
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 183 bits (395), Expect(2) = 9e-053
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +3 / -1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQAI+P +Q IGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 11850107 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 11849928
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGGHKKDR TR+KE*
Sbjct: 11849927 RGLQISRILGGHKKDRSTRNKE* 11849859
Score = 140 bits (300), Expect(2) = 4e-036
Identities = 56/83 (67%), Positives = 63/83 (75%)
Frame = +2 / -3
Query: 53 DCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQ 232
DC S+Q C A+G++QGSCPGL DPNG +H H PCLV RVRVPDQDA+QPGLQ
Sbjct: 11850108 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 11849929
Query: 233 QRSADLPYPGRTQERPRDAEQGV 301
QRSADLPYP R QERP + EQGV
Sbjct: 11849928 QRSADLPYPWRAQERPINPEQGV 11849860
Score = 128 bits (275), Expect(2) = 7e-035
Identities = 58/83 (69%), Positives = 59/83 (71%)
Frame = -2 / +1
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
YSL RV RSFLCPPRIREICRPLLKAWL SILVWNSDT GNQAR AMGVN
Sbjct: 11849860 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 11850039
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
ALIDP SPI GL+A AI
Sbjct: 11850040 RARALIDPQSPIAWTAGLMACAI 11850108
Score = 122 bits (260), Expect(2) = 6e-031
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = -1 / +3
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV ++DTGDLQTSAEGLVE+HPGLELGHER+P KE G E ++ H*DL+APGKS
Sbjct: 11849871 PG*SVFLVPAKDTGDLQTSAEGLVEEHPGLELGHERKPSKERYGCE*QESH*DLIAPGKS 11850050
Query: 110 LDRPPQPDLLNHRPDSLGN 54
LD P+P+ L+ R D L N
Sbjct: 11850051 LD*SPKPNSLDSRFDGLRN 11850107
Score = 100 bits (212), Expect(2) = 2e-022
Identities = 48/91 (52%), Positives = 55/91 (60%)
Frame = -3 / +2
Query: 324 GPSISSPTTPCSASLGLSCVLPGYGRSADLC*RPG*TASWSXXXXXXXXXXGKQWA*TGE 145
G ++++ +TPCS +GLSC GYGRSADLC*RPG* ASWS G W *
Sbjct: 11849837 GGALAAQSTPCSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITG 11850016
Query: 144 APLGSRSPGQEP*STPTARSFESQA**LGQS 52
PLGS SPGQEP* P A+ Q * L QS
Sbjct: 11850017 VPLGSHSPGQEP*LIPKAQ*PGQQV*WLAQS 11850109
Score = 47.3 bits (97), Expect(2) = 9e-053
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / -2
Query: 3 IFVCILAFMPTGWGLLLIA 59
IFVCILAFMPTGWGLLL++
Sbjct: 11850256 IFVCILAFMPTGWGLLLVS 11850200
Score = 42.3 bits (86), Expect(2) = 7e-035
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2 / +3
Query: 52 RSKPHPVGMKARMQTKM 2
RSKPHPVGMKARMQTK+
Sbjct: 11850207 RSKPHPVGMKARMQTKI 11850257
Score = 35.9 bits (72), Expect(2) = 6e-031
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +2
Query: 62 LGNQEQTPSSGHEGKDANKD 3
+ NQ+Q PSS HE KDAN+D
Sbjct: 11850197 VANQKQAPSSWHESKDANED 11850256
Score = 35.0 bits (70), Expect(2) = 4e-036
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 2 HLCLHPCLHAHWMGFA 49
+L LHPC HA+WMG A
Sbjct: 11850257 YLRLHPCFHANWMGLA 11850210
Score = 29.0 bits (57), Expect(2) = 2e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / +1
Query: 48 ANPIQWA*RQGCKQR 4
A+PIQ A*+QGCK+R
Sbjct: 11850211 ASPIQLA*KQGCKRR 11850255
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 183 bits (395), Expect(2) = 9e-053
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +3 / -1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQAI+P +Q IGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 155449 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 155270
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGGHKKDR TR+KE*
Sbjct: 155269 RGLQISRILGGHKKDRSTRNKE* 155201
Score = 140 bits (300), Expect(2) = 4e-036
Identities = 56/83 (67%), Positives = 63/83 (75%)
Frame = +2 / -3
Query: 53 DCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQ 232
DC S+Q C A+G++QGSCPGL DPNG +H H PCLV RVRVPDQDA+QPGLQ
Sbjct: 155450 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 155271
Query: 233 QRSADLPYPGRTQERPRDAEQGV 301
QRSADLPYP R QERP + EQGV
Sbjct: 155270 QRSADLPYPWRAQERPINPEQGV 155202
Score = 128 bits (275), Expect(2) = 7e-035
Identities = 58/83 (69%), Positives = 59/83 (71%)
Frame = -2 / +3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
YSL RV RSFLCPPRIREICRPLLKAWL SILVWNSDT GNQAR AMGVN
Sbjct: 155202 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 155381
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
ALIDP SPI GL+A AI
Sbjct: 155382 RARALIDPQSPIAWTAGLMACAI 155450
Score = 122 bits (260), Expect(2) = 7e-031
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = -1 / +2
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV ++DTGDLQTSAEGLVE+HPGLELGHER+P KE G E ++ H*DL+APGKS
Sbjct: 155213 PG*SVFLVPAKDTGDLQTSAEGLVEEHPGLELGHERKPSKERYGCE*QESH*DLIAPGKS 155392
Query: 110 LDRPPQPDLLNHRPDSLGN 54
LD P+P+ L+ R D L N
Sbjct: 155393 LD*SPKPNSLDSRFDGLRN 155449
Score = 100 bits (212), Expect(2) = 2e-022
Identities = 48/91 (52%), Positives = 55/91 (60%)
Frame = -3 / +1
Query: 324 GPSISSPTTPCSASLGLSCVLPGYGRSADLC*RPG*TASWSXXXXXXXXXXGKQWA*TGE 145
G ++++ +TPCS +GLSC GYGRSADLC*RPG* ASWS G W *
Sbjct: 155179 GGALAAQSTPCSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITG 155358
Query: 144 APLGSRSPGQEP*STPTARSFESQA**LGQS 52
PLGS SPGQEP* P A+ Q * L QS
Sbjct: 155359 VPLGSHSPGQEP*LIPKAQ*PGQQV*WLAQS 155451
Score = 47.3 bits (97), Expect(2) = 9e-053
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / -2
Query: 3 IFVCILAFMPTGWGLLLIA 59
IFVCILAFMPTGWGLLL++
Sbjct: 155598 IFVCILAFMPTGWGLLLVS 155542
Score = 42.3 bits (86), Expect(2) = 7e-035
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2 / +2
Query: 52 RSKPHPVGMKARMQTKM 2
RSKPHPVGMKARMQTK+
Sbjct: 155549 RSKPHPVGMKARMQTKI 155599
Score = 35.9 bits (72), Expect(2) = 7e-031
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +1
Query: 62 LGNQEQTPSSGHEGKDANKD 3
+ NQ+Q PSS HE KDAN+D
Sbjct: 155539 VANQKQAPSSWHESKDANED 155598
Score = 35.0 bits (70), Expect(2) = 4e-036
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 2 HLCLHPCLHAHWMGFA 49
+L LHPC HA+WMG A
Sbjct: 155599 YLRLHPCFHANWMGLA 155552
Score = 29.0 bits (57), Expect(2) = 2e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / +3
Query: 48 ANPIQWA*RQGCKQR 4
A+PIQ A*+QGCK+R
Sbjct: 155553 ASPIQLA*KQGCKRR 155597
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 183 bits (395), Expect(2) = 9e-053
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +3 / -2
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQAI+P +Q IGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 155449 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 155270
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGGHKKDR TR+KE*
Sbjct: 155269 RGLQISRILGGHKKDRSTRNKE* 155201
Score = 140 bits (300), Expect(2) = 4e-036
Identities = 56/83 (67%), Positives = 63/83 (75%)
Frame = +2 / -1
Query: 53 DCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQ 232
DC S+Q C A+G++QGSCPGL DPNG +H H PCLV RVRVPDQDA+QPGLQ
Sbjct: 155450 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 155271
Query: 233 QRSADLPYPGRTQERPRDAEQGV 301
QRSADLPYP R QERP + EQGV
Sbjct: 155270 QRSADLPYPWRAQERPINPEQGV 155202
Score = 128 bits (275), Expect(2) = 7e-035
Identities = 58/83 (69%), Positives = 59/83 (71%)
Frame = -2 / +3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
YSL RV RSFLCPPRIREICRPLLKAWL SILVWNSDT GNQAR AMGVN
Sbjct: 155202 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 155381
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
ALIDP SPI GL+A AI
Sbjct: 155382 RARALIDPQSPIAWTAGLMACAI 155450
Score = 122 bits (260), Expect(2) = 7e-031
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = -1 / +2
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV ++DTGDLQTSAEGLVE+HPGLELGHER+P KE G E ++ H*DL+APGKS
Sbjct: 155213 PG*SVFLVPAKDTGDLQTSAEGLVEEHPGLELGHERKPSKERYGCE*QESH*DLIAPGKS 155392
Query: 110 LDRPPQPDLLNHRPDSLGN 54
LD P+P+ L+ R D L N
Sbjct: 155393 LD*SPKPNSLDSRFDGLRN 155449
Score = 100 bits (212), Expect(2) = 2e-022
Identities = 48/91 (52%), Positives = 55/91 (60%)
Frame = -3 / +1
Query: 324 GPSISSPTTPCSASLGLSCVLPGYGRSADLC*RPG*TASWSXXXXXXXXXXGKQWA*TGE 145
G ++++ +TPCS +GLSC GYGRSADLC*RPG* ASWS G W *
Sbjct: 155179 GGALAAQSTPCSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITG 155358
Query: 144 APLGSRSPGQEP*STPTARSFESQA**LGQS 52
PLGS SPGQEP* P A+ Q * L QS
Sbjct: 155359 VPLGSHSPGQEP*LIPKAQ*PGQQV*WLAQS 155451
Score = 47.3 bits (97), Expect(2) = 9e-053
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIA 59
IFVCILAFMPTGWGLLL++
Sbjct: 155598 IFVCILAFMPTGWGLLLVS 155542
Score = 42.3 bits (86), Expect(2) = 7e-035
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2 / +2
Query: 52 RSKPHPVGMKARMQTKM 2
RSKPHPVGMKARMQTK+
Sbjct: 155549 RSKPHPVGMKARMQTKI 155599
Score = 35.9 bits (72), Expect(2) = 7e-031
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +1
Query: 62 LGNQEQTPSSGHEGKDANKD 3
+ NQ+Q PSS HE KDAN+D
Sbjct: 155539 VANQKQAPSSWHESKDANED 155598
Score = 35.0 bits (70), Expect(2) = 4e-036
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 2 HLCLHPCLHAHWMGFA 49
+L LHPC HA+WMG A
Sbjct: 155599 YLRLHPCFHANWMGLA 155552
Score = 29.0 bits (57), Expect(2) = 2e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / +3
Query: 48 ANPIQWA*RQGCKQR 4
A+PIQ A*+QGCK+R
Sbjct: 155553 ASPIQLA*KQGCKRR 155597
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0069C14
Length = 150579
Score = 183 bits (395), Expect(2) = 9e-053
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +3 / -3
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQAI+P +Q IGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 16651 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 16472
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGGHKKDR TR+KE*
Sbjct: 16471 RGLQISRILGGHKKDRSTRNKE* 16403
Score = 140 bits (300), Expect(2) = 4e-036
Identities = 56/83 (67%), Positives = 63/83 (75%)
Frame = +2 / -2
Query: 53 DCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQ 232
DC S+Q C A+G++QGSCPGL DPNG +H H PCLV RVRVPDQDA+QPGLQ
Sbjct: 16652 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 16473
Query: 233 QRSADLPYPGRTQERPRDAEQGV 301
QRSADLPYP R QERP + EQGV
Sbjct: 16472 QRSADLPYPWRAQERPINPEQGV 16404
Score = 128 bits (275), Expect(2) = 7e-035
Identities = 58/83 (69%), Positives = 59/83 (71%)
Frame = -2 / +3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
YSL RV RSFLCPPRIREICRPLLKAWL SILVWNSDT GNQAR AMGVN
Sbjct: 16404 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 16583
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
ALIDP SPI GL+A AI
Sbjct: 16584 RARALIDPQSPIAWTAGLMACAI 16652
Score = 122 bits (260), Expect(2) = 7e-031
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = -1 / +2
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV ++DTGDLQTSAEGLVE+HPGLELGHER+P KE G E ++ H*DL+APGKS
Sbjct: 16415 PG*SVFLVPAKDTGDLQTSAEGLVEEHPGLELGHERKPSKERYGCE*QESH*DLIAPGKS 16594
Query: 110 LDRPPQPDLLNHRPDSLGN 54
LD P+P+ L+ R D L N
Sbjct: 16595 LD*SPKPNSLDSRFDGLRN 16651
Score = 100 bits (212), Expect(2) = 2e-022
Identities = 48/91 (52%), Positives = 55/91 (60%)
Frame = -3 / +1
Query: 324 GPSISSPTTPCSASLGLSCVLPGYGRSADLC*RPG*TASWSXXXXXXXXXXGKQWA*TGE 145
G ++++ +TPCS +GLSC GYGRSADLC*RPG* ASWS G W *
Sbjct: 16381 GGALAAQSTPCSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITG 16560
Query: 144 APLGSRSPGQEP*STPTARSFESQA**LGQS 52
PLGS SPGQEP* P A+ Q * L QS
Sbjct: 16561 VPLGSHSPGQEP*LIPKAQ*PGQQV*WLAQS 16653
Score = 47.3 bits (97), Expect(2) = 9e-053
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLIA 59
IFVCILAFMPTGWGLLL++
Sbjct: 16800 IFVCILAFMPTGWGLLLVS 16744
Score = 42.3 bits (86), Expect(2) = 7e-035
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2 / +2
Query: 52 RSKPHPVGMKARMQTKM 2
RSKPHPVGMKARMQTK+
Sbjct: 16751 RSKPHPVGMKARMQTKI 16801
Score = 35.9 bits (72), Expect(2) = 7e-031
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +1
Query: 62 LGNQEQTPSSGHEGKDANKD 3
+ NQ+Q PSS HE KDAN+D
Sbjct: 16741 VANQKQAPSSWHESKDANED 16800
Score = 35.0 bits (70), Expect(2) = 4e-036
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 2 HLCLHPCLHAHWMGFA 49
+L LHPC HA+WMG A
Sbjct: 16801 YLRLHPCFHANWMGLA 16754
Score = 29.0 bits (57), Expect(2) = 2e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / +3
Query: 48 ANPIQWA*RQGCKQR 4
A+PIQ A*+QGCK+R
Sbjct: 16755 ASPIQLA*KQGCKRR 16799
>gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014975, whole
genome shotgun sequence
Length = 9397
Score = 183 bits (395), Expect(2) = 9e-053
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +3 / +1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQAI+P +Q IGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 5068 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 5247
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGGHKKDR TR+KE*
Sbjct: 5248 RGLQISRILGGHKKDRSTRNKE* 5316
Score = 140 bits (300), Expect(2) = 4e-036
Identities = 56/83 (67%), Positives = 63/83 (75%)
Frame = +2 / +3
Query: 53 DCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQ 232
DC S+Q C A+G++QGSCPGL DPNG +H H PCLV RVRVPDQDA+QPGLQ
Sbjct: 5067 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 5246
Query: 233 QRSADLPYPGRTQERPRDAEQGV 301
QRSADLPYP R QERP + EQGV
Sbjct: 5247 QRSADLPYPWRAQERPINPEQGV 5315
Score = 128 bits (275), Expect(2) = 8e-035
Identities = 58/83 (69%), Positives = 59/83 (71%)
Frame = -2 / -3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
YSL RV RSFLCPPRIREICRPLLKAWL SILVWNSDT GNQAR AMGVN
Sbjct: 5315 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 5136
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
ALIDP SPI GL+A AI
Sbjct: 5135 RARALIDPQSPIAWTAGLMACAI 5067
Score = 122 bits (260), Expect(2) = 7e-031
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = -1 / -2
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV ++DTGDLQTSAEGLVE+HPGLELGHER+P KE G E ++ H*DL+APGKS
Sbjct: 5304 PG*SVFLVPAKDTGDLQTSAEGLVEEHPGLELGHERKPSKERYGCE*QESH*DLIAPGKS 5125
Query: 110 LDRPPQPDLLNHRPDSLGN 54
LD P+P+ L+ R D L N
Sbjct: 5124 LD*SPKPNSLDSRFDGLRN 5068
Score = 100 bits (212), Expect(2) = 3e-022
Identities = 48/91 (52%), Positives = 55/91 (60%)
Frame = -3 / -1
Query: 324 GPSISSPTTPCSASLGLSCVLPGYGRSADLC*RPG*TASWSXXXXXXXXXXGKQWA*TGE 145
G ++++ +TPCS +GLSC GYGRSADLC*RPG* ASWS G W *
Sbjct: 5338 GGALAAQSTPCSGLIGLSCARQGYGRSADLC*RPG*RASWSGTRTRKETKQGTLWV*ITG 5159
Query: 144 APLGSRSPGQEP*STPTARSFESQA**LGQS 52
PLGS SPGQEP* P A+ Q * L QS
Sbjct: 5158 VPLGSHSPGQEP*LIPKAQ*PGQQV*WLAQS 5066
Score = 47.3 bits (97), Expect(2) = 9e-053
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIA 59
IFVCILAFMPTGWGLLL++
Sbjct: 4919 IFVCILAFMPTGWGLLLVS 4975
Score = 42.3 bits (86), Expect(2) = 8e-035
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2 / -2
Query: 52 RSKPHPVGMKARMQTKM 2
RSKPHPVGMKARMQTK+
Sbjct: 4968 RSKPHPVGMKARMQTKI 4918
Score = 35.9 bits (72), Expect(2) = 7e-031
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / -1
Query: 62 LGNQEQTPSSGHEGKDANKD 3
+ NQ+Q PSS HE KDAN+D
Sbjct: 4978 VANQKQAPSSWHESKDANED 4919
Score = 35.0 bits (70), Expect(2) = 4e-036
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / +1
Query: 2 HLCLHPCLHAHWMGFA 49
+L LHPC HA+WMG A
Sbjct: 4918 YLRLHPCFHANWMGLA 4965
Score = 29.0 bits (57), Expect(2) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / -3
Query: 48 ANPIQWA*RQGCKQR 4
A+PIQ A*+QGCK+R
Sbjct: 4964 ASPIQLA*KQGCKRR 4920
>gb|CB642890.1|CB642890 OSJNEb03E21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03E21 3', mRNA sequence
Length = 769
Score = 188 bits (404), Expect = 7e-046
Identities = 74/98 (75%), Positives = 87/98 (88%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IFVC LAF+P+GWG+LLIAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWF
Sbjct: 571 IFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWF 392
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSK 296
PFVSEFQTRMLFNQAFSRGLQISRILGG KK+R S+
Sbjct: 391 PFVSEFQTRMLFNQAFSRGLQISRILGGQKKERERSSR 278
>gb|CB677903.1|CB677903 OSJNEe15F12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15F12 3', mRNA sequence
Length = 804
Score = 188 bits (404), Expect = 7e-046
Identities = 74/98 (75%), Positives = 87/98 (88%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IFVC LAF+P+GWG+LLIAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWF
Sbjct: 606 IFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWF 427
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSK 296
PFVSEFQTRMLFNQAFSRGLQISRILGG KK+R S+
Sbjct: 426 PFVSEFQTRMLFNQAFSRGLQISRILGGQKKERERSSR 313
>dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C02, full
insert sequence
Length = 2219
Score = 188 bits (404), Expect = 7e-046
Identities = 74/98 (75%), Positives = 87/98 (88%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IFVC LAF+P+GWG+LLIAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWF
Sbjct: 1577 IFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWF 1756
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSK 296
PFVSEFQTRMLFNQAFSRGLQISRILGG KK+R S+
Sbjct: 1757 PFVSEFQTRMLFNQAFSRGLQISRILGGQKKERERSSR 1870
>dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-G07, full
insert sequence
Length = 1992
Score = 188 bits (404), Expect = 7e-046
Identities = 74/98 (75%), Positives = 87/98 (88%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IFVC LAF+P+GWG+LLIAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWF
Sbjct: 1278 IFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWF 1457
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSK 296
PFVSEFQTRMLFNQAFSRGLQISRILGG KK+R S+
Sbjct: 1458 PFVSEFQTRMLFNQAFSRGLQISRILGGQKKERERSSR 1571
>ref|NM_187591.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 4929
Score = 188 bits (404), Expect = 7e-046
Identities = 74/98 (75%), Positives = 87/98 (88%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IFVC LAF+P+GWG+LLIAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWF
Sbjct: 4624 IFVCFLAFLPSGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWF 4803
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSK 296
PFVSEFQTRMLFNQAFSRGLQISRILGG KK+R S+
Sbjct: 4804 PFVSEFQTRMLFNQAFSRGLQISRILGGQKKERERSSR 4917
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 184 bits (396), Expect = 9e-045
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +3 / +2
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 22451564 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 22451743
Query: 234 RGLQISRILGGHKKDRGTRSKE**GC*LKVRLSGVMSS 347
RGLQISRILGGHKKDR TR+KE** + + V+SS
Sbjct: 22451744 RGLQISRILGGHKKDRATRNKE**PVCHSLDMYSVVSS 22451857
Score = 133 bits (286), Expect = 1e-029
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = -2 / -2
Query: 349 QDDITPDRRTFNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQAR 170
++D T + Q YYSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR
Sbjct: 22451859 EEDTTEYMSSEWQTGYYSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQAR 22451680
Query: 169 KAMGVNXXXXXXXXXXXXXALIDPHSPIF*ITGLIAWA 56
A+GV ALIDPH+P+ ITGLIA A
Sbjct: 22451679 NAIGVKSRSPMMISYPLASALIDPHNPMRTITGLIACA 22451566
Score = 117 bits (251), Expect = 9e-025
Identities = 51/86 (59%), Positives = 60/86 (69%)
Frame = +2 / +1
Query: 56 CPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQQ 235
C SYQA + R VG+DQG+C G+ D +GA +H P LVPV +RVPDQ+A+QPGLQQ
Sbjct: 22451566 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 22451745
Query: 236 RSADLPYPGRTQERPRDAEQGVVGLL 313
RSADL P R QERP EQGVV L
Sbjct: 22451746 RSADLANPWRPQERPSYTEQGVVACL 22451823
Score = 113 bits (242), Expect = 2e-023
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = -1 / -1
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 22451800 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 22451621
Query: 110 LDRPPQPDLLNHRPDSLGNQEQT 42
LDR PQPD N+ DSL N T
Sbjct: 22451620 LDRSPQPDAHNYWLDSLRNLNPT 22451552
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 184 bits (396), Expect = 9e-045
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +3 / +1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 35904628 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 35904807
Query: 234 RGLQISRILGGHKKDRGTRSKE**GC*LKVRLSGVMSS 347
RGLQISRILGGHKKDR TR+KE** + + V+SS
Sbjct: 35904808 RGLQISRILGGHKKDRATRNKE**PVCHSLDMYSVVSS 35904921
Score = 133 bits (286), Expect = 1e-029
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = -2 / -2
Query: 349 QDDITPDRRTFNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQAR 170
++D T + Q YYSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR
Sbjct: 35904923 EEDTTEYMSSEWQTGYYSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQAR 35904744
Query: 169 KAMGVNXXXXXXXXXXXXXALIDPHSPIF*ITGLIAWA 56
A+GV ALIDPH+P+ ITGLIA A
Sbjct: 35904743 NAIGVKSRSPMMISYPLASALIDPHNPMRTITGLIACA 35904630
Score = 117 bits (251), Expect = 9e-025
Identities = 51/86 (59%), Positives = 60/86 (69%)
Frame = +2 / +3
Query: 56 CPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQQ 235
C SYQA + R VG+DQG+C G+ D +GA +H P LVPV +RVPDQ+A+QPGLQQ
Sbjct: 35904630 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 35904809
Query: 236 RSADLPYPGRTQERPRDAEQGVVGLL 313
RSADL P R QERP EQGVV L
Sbjct: 35904810 RSADLANPWRPQERPSYTEQGVVACL 35904887
Score = 113 bits (242), Expect = 2e-023
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = -1 / -1
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 35904864 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 35904685
Query: 110 LDRPPQPDLLNHRPDSLGNQEQT 42
LDR PQPD N+ DSL N T
Sbjct: 35904684 LDRSPQPDAHNYWLDSLRNLNPT 35904616
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 184 bits (396), Expect = 9e-045
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +3 / +3
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
+AQAI+PVI +IGLWGSIKALARGYEI+MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 35822385 VAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 35822564
Query: 234 RGLQISRILGGHKKDRGTRSKE**GC*LKVRLSGVMSS 347
RGLQISRILGGHKKDR TR+KE** + + V+SS
Sbjct: 35822565 RGLQISRILGGHKKDRATRNKE**PVCHSLDMYSVVSS 35822678
Score = 133 bits (286), Expect = 1e-029
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = -2 / -1
Query: 349 QDDITPDRRTFNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQAR 170
++D T + Q YYSL RV RSFL PPRIREICRPLLKAWL SILVWNSDTNGNQAR
Sbjct: 35822680 EEDTTEYMSSEWQTGYYSLFRVARSFLWPPRIREICRPLLKAWLKSILVWNSDTNGNQAR 35822501
Query: 169 KAMGVNXXXXXXXXXXXXXALIDPHSPIF*ITGLIAWA 56
A+GV ALIDPH+P+ ITGLIA A
Sbjct: 35822500 NAIGVKSRSPMMISYPLASALIDPHNPMRTITGLIACA 35822387
Score = 117 bits (251), Expect = 9e-025
Identities = 51/86 (59%), Positives = 60/86 (69%)
Frame = +2 / +2
Query: 56 CPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQQ 235
C SYQA + R VG+DQG+C G+ D +GA +H P LVPV +RVPDQ+A+QPGLQQ
Sbjct: 35822387 CASYQASNCAHRVVGIDQGACEGI*DHHGAPALHPDRVPRLVPVCIRVPDQNALQPGLQQ 35822566
Query: 236 RSADLPYPGRTQERPRDAEQGVVGLL 313
RSADL P R QERP EQGVV L
Sbjct: 35822567 RSADLANPWRPQERPSYTEQGVVACL 35822644
Score = 113 bits (242), Expect = 2e-023
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = -1 / -3
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV+++D+ DLQTSAEGLVE+H GLELG++REP +E + E+++PH DL++P K
Sbjct: 35822621 PCSSVFLVAAKDSRDLQTSAEGLVEEHSGLELGYKREPSEERDRGEEQEPHDDLISPRKR 35822442
Query: 110 LDRPPQPDLLNHRPDSLGNQEQT 42
LDR PQPD N+ DSL N T
Sbjct: 35822441 LDRSPQPDAHNYWLDSLRNLNPT 35822373
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 183 bits (395), Expect = 1e-044
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +3 / -3
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQAI+P +Q IGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 29548844 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 29548665
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGGHKKDR TR+KE*
Sbjct: 29548664 RGLQISRILGGHKKDRSTRNKE* 29548596
Score = 144 bits (310), Expect = 6e-033
Identities = 58/81 (71%), Positives = 69/81 (85%)
Frame = +3 / -2
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
I+QA +PV++ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 3910815 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 3910636
Query: 234 RGLQISRILGGHKKDRGTRSK 296
RGLQISRIL G KK R+K
Sbjct: 3910635 RGLQISRILAGGKKQS*ARTK 3910573
Score = 140 bits (300), Expect = 1e-031
Identities = 56/83 (67%), Positives = 63/83 (75%)
Frame = +2 / -2
Query: 53 DCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQ 232
DC S+Q C A+G++QGSCPGL DPNG +H H PCLV RVRVPDQDA+QPGLQ
Sbjct: 29548845 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 29548666
Query: 233 QRSADLPYPGRTQERPRDAEQGV 301
QRSADLPYP R QERP + EQGV
Sbjct: 29548665 QRSADLPYPWRAQERPINPEQGV 29548597
Score = 128 bits (275), Expect = 4e-028
Identities = 58/83 (69%), Positives = 59/83 (71%)
Frame = -2 / +1
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
YSL RV RSFLCPPRIREICRPLLKAWL SILVWNSDT GNQAR AMGVN
Sbjct: 29548597 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 29548776
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
ALIDP SPI GL+A AI
Sbjct: 29548777 RARALIDPQSPIAWTAGLMACAI 29548845
Score = 122 bits (260), Expect = 5e-026
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = -1 / +3
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV ++DTGDLQTSAEGLVE+HPGLELGHER+P KE G E ++ H*DL+APGKS
Sbjct: 29548608 PG*SVFLVPAKDTGDLQTSAEGLVEEHPGLELGHERKPSKERYGCE*QESH*DLIAPGKS 29548787
Query: 110 LDRPPQPDLLNHRPDSLGN 54
LD P+P+ L+ R D L N
Sbjct: 29548788 LD*SPKPNSLDSRFDGLRN 29548844
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 183 bits (395), Expect = 1e-044
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +3 / -1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQAI+P +Q IGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 30518088 IAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 30517909
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGGHKKDR TR+KE*
Sbjct: 30517908 RGLQISRILGGHKKDRSTRNKE* 30517840
Score = 144 bits (310), Expect = 6e-033
Identities = 58/81 (71%), Positives = 69/81 (85%)
Frame = +3 / -2
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
I+QA +PV++ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 4078163 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 4077984
Query: 234 RGLQISRILGGHKKDRGTRSK 296
RGLQISRIL G KK R+K
Sbjct: 4077983 RGLQISRILAGGKKQS*ARTK 4077921
Score = 140 bits (300), Expect = 1e-031
Identities = 56/83 (67%), Positives = 63/83 (75%)
Frame = +2 / -3
Query: 53 DCPSYQACDSKDRAVGVDQGSCPGLRDPNGASPVHAHCFPCLVPVRVRVPDQDAVQPGLQ 232
DC S+Q C A+G++QGSCPGL DPNG +H H PCLV RVRVPDQDA+QPGLQ
Sbjct: 30518089 DCASHQTCCPGYWALGINQGSCPGL*DPNGTPVIHTHSVPCLVSFRVRVPDQDALQPGLQ 30517910
Query: 233 QRSADLPYPGRTQERPRDAEQGV 301
QRSADLPYP R QERP + EQGV
Sbjct: 30517909 QRSADLPYPWRAQERPINPEQGV 30517841
Score = 128 bits (275), Expect = 4e-028
Identities = 58/83 (69%), Positives = 59/83 (71%)
Frame = -2 / +2
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
YSL RV RSFLCPPRIREICRPLLKAWL SILVWNSDT GNQAR AMGVN
Sbjct: 30517841 YSLFRVDRSFLCPPRIREICRPLLKAWLKSILVWNSDTKGNQARNAMGVNNRSPIRIS*P 30518020
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
ALIDP SPI GL+A AI
Sbjct: 30518021 RARALIDPQSPIAWTAGLMACAI 30518089
Score = 122 bits (260), Expect = 5e-026
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = -1 / +1
Query: 290 PRPSVFLVSSQDTGDLQTSAEGLVEQHPGLELGHEREPGKESNGREQEKPH*DLVAPGKS 111
P SVFLV ++DTGDLQTSAEGLVE+HPGLELGHER+P KE G E ++ H*DL+APGKS
Sbjct: 30517852 PG*SVFLVPAKDTGDLQTSAEGLVEEHPGLELGHERKPSKERYGCE*QESH*DLIAPGKS 30518031
Query: 110 LDRPPQPDLLNHRPDSLGN 54
LD P+P+ L+ R D L N
Sbjct: 30518032 LD*SPKPNSLDSRFDGLRN 30518088
>gb|C24849.1|C24849 C24849 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S15947_1A, mRNA sequence
Length = 460
Score = 177 bits (380), Expect = 1e-042
Identities = 69/90 (76%), Positives = 80/90 (88%)
Frame = +3 / +3
Query: 12 CILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFV 191
C LAF+P+GWG+L IAQA +P+ + GLWGS++ALAR YEI+MG+LLFTPI LAWFPFV
Sbjct: 3 CFLAFLPSGWGILXIAQACKPLARXAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFV 182
Query: 192 SEFQTRMLFNQAFSRGLQISRILGGHKKDR 281
SEFQTRMLFNQAFSRGLQISRILGG KK+R
Sbjct: 183 SEFQTRMLFNQAFSRGLQISRILGGQKKER 272
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 152 bits (326), Expect(2) = 2e-041
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / -3
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1568587 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1568408
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 1568407 AFSRGLQISRILGGQKKERERSSR 1568336
Score = 113 bits (241), Expect = 2e-023
Identities = 42/80 (52%), Positives = 63/80 (78%)
Frame = +3 / +2
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
++ IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1052978 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1053157
Query: 225 AFSRGLQISRILGGHKKDRG 284
AFSRGL+IS IL G+ + G
Sbjct: 1053158 AFSRGLEISLILAGNNPNAG 1053217
Score = 40.9 bits (83), Expect(2) = 2e-041
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3 / -2
Query: 3 IFVCILAFMPTGWGLLLI 56
IFVC LAF+P+GWG+LL+
Sbjct: 1568711 IFVCFLAFLPSGWGILLV 1568658
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 152 bits (326), Expect(2) = 2e-041
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / -2
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1562531 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1562352
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 1562351 AFSRGLQISRILGGQKKERERSSR 1562280
Score = 113 bits (241), Expect(2) = 3e-024
Identities = 42/80 (52%), Positives = 63/80 (78%)
Frame = +3 / +3
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
++ IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1054800 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1054979
Query: 225 AFSRGLQISRILGGHKKDRG 284
AFSRGL+IS IL G+ + G
Sbjct: 1054980 AFSRGLEISLILAGNNPNAG 1055039
Score = 40.9 bits (83), Expect(2) = 2e-041
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLI 56
IFVC LAF+P+GWG+LL+
Sbjct: 1562655 IFVCFLAFLPSGWGILLV 1562602
Score = 35.0 bits (70), Expect(2) = 3e-024
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIA 59
+F ILAF+PTGWG+L ++
Sbjct: 1054105 VFAAILAFVPTGWGVLSVS 1054161
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
complete sequence
Length = 127098
Score = 152 bits (326), Expect(2) = 2e-041
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / -3
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 42094 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 41915
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 41914 AFSRGLQISRILGGQKKERERSSR 41843
Score = 40.9 bits (83), Expect(2) = 2e-041
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3 / -2
Query: 3 IFVCILAFMPTGWGLLLI 56
IFVC LAF+P+GWG+LL+
Sbjct: 42218 IFVCFLAFLPSGWGILLV 42165
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07,
complete sequence
Length = 117612
Score = 152 bits (326), Expect(2) = 2e-041
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / -3
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 99706 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 99527
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 99526 AFSRGLQISRILGGQKKERERSSR 99455
Score = 40.9 bits (83), Expect(2) = 2e-041
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3 / -2
Query: 3 IFVCILAFMPTGWGLLLI 56
IFVC LAF+P+GWG+LL+
Sbjct: 99830 IFVCFLAFLPSGWGILLV 99777
>gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005795, whole
genome shotgun sequence
Length = 23395
Score = 152 bits (326), Expect(2) = 2e-041
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / +1
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 21340 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 21519
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 21520 AFSRGLQISRILGGQKKERERSSR 21591
Score = 40.9 bits (83), Expect(2) = 2e-041
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLI 56
IFVC LAF+P+GWG+LL+
Sbjct: 21216 IFVCFLAFLPSGWGILLV 21269
>dbj|AG209376.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE6034_0_502_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE6034, genomic survey sequence
Length = 777
Score = 152 bits (326), Expect(2) = 2e-041
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / -1
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 366 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 187
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 186 AFSRGLQISRILGGQKKERERSSR 115
Score = 40.9 bits (83), Expect(2) = 2e-041
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLI 56
IFVC LAF+P+GWG+LL+
Sbjct: 490 IFVCFLAFLPSGWGILLV 437
>dbj|AG210594.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF2001_0_502_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF2001, genomic survey sequence
Length = 599
Score = 152 bits (326), Expect(2) = 2e-041
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / +1
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 313 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 492
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 493 AFSRGLQISRILGGQKKERERSSR 564
Score = 40.9 bits (83), Expect(2) = 2e-041
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLI 56
IFVC LAF+P+GWG+LL+
Sbjct: 189 IFVCFLAFLPSGWGILLV 242
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 152 bits (326), Expect = 4e-035
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / -2
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1760949 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1760770
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 1760769 AFSRGLQISRILGGQKKERERSSR 1760698
Score = 113 bits (241), Expect = 2e-023
Identities = 42/80 (52%), Positives = 63/80 (78%)
Frame = +3 / +1
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
++ IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1245340 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1245519
Query: 225 AFSRGLQISRILGGHKKDRG 284
AFSRGL+IS IL G+ + G
Sbjct: 1245520 AFSRGLEISLILAGNNPNAG 1245579
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 152 bits (326), Expect = 4e-035
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / -3
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1562531 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1562352
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 1562351 AFSRGLQISRILGGQKKERERSSR 1562280
Score = 113 bits (241), Expect = 2e-023
Identities = 42/80 (52%), Positives = 63/80 (78%)
Frame = +3 / +3
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
++ IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1054800 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1054979
Query: 225 AFSRGLQISRILGGHKKDRG 284
AFSRGL+IS IL G+ + G
Sbjct: 1054980 AFSRGLEISLILAGNNPNAG 1055039
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 152 bits (326), Expect = 4e-035
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +3 / -2
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 1562533 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1562354
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 1562353 AFSRGLQISRILGGQKKERERSSR 1562282
Score = 113 bits (241), Expect = 2e-023
Identities = 42/80 (52%), Positives = 63/80 (78%)
Frame = +3 / +2
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
++ IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WFPF+S FQTR+LFNQ
Sbjct: 1054802 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1054981
Query: 225 AFSRGLQISRILGGHKKDRG 284
AFSRGL+IS IL G+ + G
Sbjct: 1054982 AFSRGLEISLILAGNNPNAG 1055041
>dbj|AG207902.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE0035_0_405_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE0035, genomic survey sequence
Length = 333
Score = 149 bits (320), Expect = 3e-034
Identities = 61/84 (72%), Positives = 71/84 (84%)
Frame = +3 / +1
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR Y I+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 22 LFQIAQACKPLARRAGLWGSVRALARAYXIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 201
Query: 225 AFSRGLQISRILGGHKKDRGTRSK 296
AFSRGLQISRILGG KK+R S+
Sbjct: 202 AFSRGLQISRILGGQKKERERSSR 273
>dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0499E08, ***
SEQUENCING IN PROGRESS ***
Length = 85150
Score = 144 bits (310), Expect(2) = 3e-033
Identities = 58/81 (71%), Positives = 69/81 (85%)
Frame = +3 / -1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
I+QA +PV++ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 38953 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 38774
Query: 234 RGLQISRILGGHKKDRGTRSK 296
RGLQISRIL G KK R+K
Sbjct: 38773 RGLQISRILAGGKKQS*ARTK 38711
Score = 29.5 bits (58), Expect(2) = 3e-033
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLI 56
IF LAF PTGW +L +
Sbjct: 40489 IFASFLAFAPTGWAILQV 40436
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0019L07
Length = 131650
Score = 144 bits (310), Expect(2) = 5e-033
Identities = 58/81 (71%), Positives = 69/81 (85%)
Frame = +3 / -1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
I+QA +PV++ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 121816 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 121637
Query: 234 RGLQISRILGGHKKDRGTRSK 296
RGLQISRIL G KK R+K
Sbjct: 121636 RGLQISRILAGGKKQS*ARTK 121574
Score = 29.5 bits (58), Expect(2) = 5e-033
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLI 56
IF LAF PTGW +L +
Sbjct: 123352 IFASFLAFAPTGWAILQV 123299
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0036B04
Length = 136159
Score = 144 bits (310), Expect(2) = 5e-033
Identities = 58/81 (71%), Positives = 69/81 (85%)
Frame = +3 / -1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
I+QA +PV++ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 11422 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 11243
Query: 234 RGLQISRILGGHKKDRGTRSK 296
RGLQISRIL G KK R+K
Sbjct: 11242 RGLQISRILAGGKKQS*ARTK 11180
Score = 29.5 bits (58), Expect(2) = 5e-033
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLI 56
IF LAF PTGW +L +
Sbjct: 12958 IFASFLAFAPTGWAILQV 12905
>gb|AACV01013161.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013161, whole
genome shotgun sequence
Length = 8989
Score = 144 bits (310), Expect = 6e-033
Identities = 58/81 (71%), Positives = 69/81 (85%)
Frame = +3 / +1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
I+QA +PV++ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 1228 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 1407
Query: 234 RGLQISRILGGHKKDRGTRSK 296
RGLQISRIL G KK R+K
Sbjct: 1408 RGLQISRILAGGKKQS*ARTK 1470
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 144 bits (310), Expect = 6e-033
Identities = 58/81 (71%), Positives = 69/81 (85%)
Frame = +3 / -1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
I+QA +PV++ GLWGS+KAL+RGYE LMG+L+F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 3910815 ISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAFS 3910636
Query: 234 RGLQISRILGGHKKDRGTRSK 296
RGLQISRIL G KK R+K
Sbjct: 3910635 RGLQISRILAGGKKQS*ARTK 3910573
>ref|NM_187562.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 6168
Score = 143 bits (306), Expect = 2e-032
Identities = 53/95 (55%), Positives = 76/95 (80%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F ILAF+PTGWG+L IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WF
Sbjct: 4576 VFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWF 4755
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 287
PF+S FQTR+LFNQAFSRGL+IS IL G+ + G+
Sbjct: 4756 PFISTFQTRLLFNQAFSRGLEISLILAGNNPNAGS 4860
>gb|CB666398.1|CB666398 OSJNEd13E16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13E16 5', mRNA sequence
Length = 803
Score = 142 bits (305), Expect = 3e-032
Identities = 53/94 (56%), Positives = 75/94 (79%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F ILAF+PTGWG+L IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WF
Sbjct: 229 VFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWF 408
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 409 PFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 510
>gb|CB666399.1|CB666399 OSJNEd13E16.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13E16 3', mRNA sequence
Length = 802
Score = 142 bits (305), Expect = 3e-032
Identities = 53/94 (56%), Positives = 75/94 (79%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F ILAF+PTGWG+L IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WF
Sbjct: 584 VFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWF 405
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 404 PFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 303
>gb|CB671522.1|CB671522 OSJNEe05C09.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05C09 3', mRNA sequence
Length = 757
Score = 142 bits (305), Expect = 3e-032
Identities = 53/94 (56%), Positives = 75/94 (79%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F ILAF+PTGWG+L IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WF
Sbjct: 538 VFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWF 359
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 358 PFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 257
>dbj|AK059373.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-F03, full
insert sequence
Length = 1245
Score = 142 bits (305), Expect = 3e-032
Identities = 53/94 (56%), Positives = 75/94 (79%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F ILAF+PTGWG+L IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WF
Sbjct: 778 VFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWF 957
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 958 PFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 1059
>dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020O14, full
insert sequence
Length = 2087
Score = 142 bits (305), Expect = 3e-032
Identities = 53/94 (56%), Positives = 75/94 (79%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F ILAF+PTGWG+L IA A +P+++K+GLW ++++LAR Y+ G+++F PIA +WF
Sbjct: 1546 VFAAILAFVPTGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWF 1725
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 1726 PFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 1827
>dbj|AG210620.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF2001_0_503_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF2001, genomic survey sequence
Length = 504
Score = 119 bits (254), Expect(2) = 1e-031
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = +3 / +3
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+ ++ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 315 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 494
Query: 225 AFS 233
AFS
Sbjct: 495 AFS 503
Score = 40.9 bits (83), Expect(2) = 1e-031
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLI 56
IFVC LAF+P+GWG+LL+
Sbjct: 191 IFVCFLAFLPSGWGILLV 244
>dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095O05, full
insert sequence
Length = 5774
Score = 134 bits (288), Expect = 7e-030
Identities = 53/90 (58%), Positives = 68/90 (75%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF +LAF+PTGWGL+ IAQ IRP I+ +W S+ ++AR YEIL+G+ + P+AF +W
Sbjct: 5224 IFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGVFVMAPVAFFSWL 5403
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHK 272
P E QTR+LFN+AFSRGLQISRIL G K
Sbjct: 5404 PGFQEMQTRVLFNEAFSRGLQISRILAGKK 5493
>dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036H01, full
insert sequence
Length = 5949
Score = 134 bits (288), Expect = 7e-030
Identities = 53/90 (58%), Positives = 68/90 (75%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF +LAF+PTGWGL+ IAQ IRP I+ +W S+ ++AR YEIL+G+ + P+AF +W
Sbjct: 5128 IFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGVFVMAPVAFFSWL 5307
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHK 272
P E QTR+LFN+AFSRGLQISRIL G K
Sbjct: 5308 PGFQEMQTRVLFNEAFSRGLQISRILAGKK 5397
>dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I17, full
insert sequence
Length = 5396
Score = 134 bits (288), Expect = 7e-030
Identities = 53/90 (58%), Positives = 68/90 (75%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF +LAF+PTGWGL+ IAQ IRP I+ +W S+ ++AR YEIL+G+ + P+AF +W
Sbjct: 4813 IFTSLLAFIPTGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGVFVMAPVAFFSWL 4992
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHK 272
P E QTR+LFN+AFSRGLQISRIL G K
Sbjct: 4993 PGFQEMQTRVLFNEAFSRGLQISRILAGKK 5082
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,379,929,154
Number of Sequences: 438736
Number of extensions: 72529390
Number of successful extensions: 451139
Number of sequences better than 1.0e-020: 103
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 134387939316
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)