TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.444
(1020 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU198219.1|AU198219 AU198219 Rice green shoot Oryza sati... 182 6e-044
gb|CB681630.1|CB681630 OSJNEf08C09.r OSJNEf Oryza sativa (j... 182 6e-044
gb|CB682960.1|CB682960 OSJNEf10M18.f OSJNEf Oryza sativa (j... 182 6e-044
gb|CB682961.1|CB682961 OSJNEf10M18.r OSJNEf Oryza sativa (j... 182 6e-044
dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA... 182 6e-044
dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA... 182 6e-044
dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA... 182 6e-044
dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA... 182 6e-044
dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA... 182 6e-044
gb|AACV01010566.1| Oryza sativa (japonica cultivar-group) c... 182 6e-044
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 182 6e-044
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 182 6e-044
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 182 6e-044
emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromoso... 182 6e-044
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 182 6e-044
ref|XM_474092.1| Oryza sativa (japonica cultivar-group), p... 180 2e-043
gb|AU095966.1|AU095966 AU095966 Rice green shoot Oryza sati... 180 3e-043
gb|AU095885.1|AU095885 AU095885 Rice green shoot Oryza sati... 134 4e-038
gb|D46826.1|D46826 RICS11741A Rice green shoot Oryza sativa... 148 1e-033
gb|AU095985.1|AU095985 AU095985 Rice green shoot Oryza sati... 145 9e-033
gb|AU096374.1|AU096374 AU096374 Rice green shoot Oryza sati... 101 7e-029
dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA... 97 9e-026
ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA 97 9e-026
dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA... 97 9e-026
dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA... 97 2e-025
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 97 2e-025
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 97 2e-025
dbj|AB023482.2| Oryza sativa (japonica cultivar-group) geno... 97 2e-025
dbj|AP002864.2| Oryza sativa (japonica cultivar-group) geno... 97 2e-025
gb|AACV01013105.1| Oryza sativa (japonica cultivar-group) c... 97 2e-025
gb|AU078328.1|AU078328 AU078328 Rice panicle at ripening st... 97 2e-025
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 87 7e-024
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 87 7e-024
dbj|AP003523.3| Oryza sativa (japonica cultivar-group) geno... 87 8e-024
gb|AACV01014669.1| Oryza sativa (japonica cultivar-group) c... 87 8e-024
dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA... 87 8e-024
gb|CD670796.1|CD670796 OsMR213 5MT resistant rice mutant cD... 77 5e-021
gb|CV722569.1|CV722569 YTPSP--01-N18.b1 TPSP-overexpression... 101 8e-021
>gb|AU198219.1|AU198219 AU198219 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S16276, mRNA sequence
Length = 453
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / +2
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 188 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 367
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 368 IPIALKLLVNCGCDVPPGYTCA*AILMH 451
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / -1
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 441 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 262
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 261 SPMCTSLPRRSTHTPSLSASMGHVSE 184
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / -3
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 436 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 257
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 256 DVHLVAEEVHAHAELE 209
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 224 TRRA*ARRWGTCPRT 180
>gb|CB681630.1|CB681630 OSJNEf08C09.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf08C09 3', mRNA sequence
Length = 642
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / -1
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 606 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 427
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 426 IPIALKLLVNCGCDVPPGYTCA*AILMH 343
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / +2
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 353 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 532
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 533 SPMCTSLPRRSTHTPSLSASMGHVSE 610
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / +1
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 358 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 537
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 538 DVHLVAEEVHAHAELE 585
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 570 TRRA*ARRWGTCPRT 614
>gb|CB682960.1|CB682960 OSJNEf10M18.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10M18 5', mRNA sequence
Length = 717
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / +3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 396 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 575
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 576 IPIALKLLVNCGCDVPPGYTCA*AILMH 659
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / -3
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 649 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 470
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 469 SPMCTSLPRRSTHTPSLSASMGHVSE 392
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / -2
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 644 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 465
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 464 DVHLVAEEVHAHAELE 417
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 432 TRRA*ARRWGTCPRT 388
>gb|CB682961.1|CB682961 OSJNEf10M18.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10M18 3', mRNA sequence
Length = 635
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / -1
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 611 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 432
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 431 IPIALKLLVNCGCDVPPGYTCA*AILMH 348
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / +1
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 358 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 537
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 538 SPMCTSLPRRSTHTPSLSASMGHVSE 615
Score = 116 bits (248), Expect(2) = 1e-029
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = -2 / +3
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG V+ +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 363 LGAGVARRDVAAAVDEELERDGDVNADVEHLGLDGGAKAGGGGQAGDVLHQRAARHVGVA 542
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 543 DVHLVAEEVHAHAELE 590
Score = 38.2 bits (77), Expect(2) = 1e-029
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 575 TRRA*ARRWGTCPRT 619
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full
insert sequence
Length = 1257
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / +3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 687 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 866
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 867 IPIALKLLVNCGCDVPPGYTCA*AILMH 950
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / -3
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 940 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 761
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 760 SPMCTSLPRRSTHTPSLSASMGHVSE 683
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / -2
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 935 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 756
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 755 DVHLVAEEVHAHAELE 708
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 723 TRRA*ARRWGTCPRT 679
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full
insert sequence
Length = 1272
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / +2
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 689 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 868
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 869 IPIALKLLVNCGCDVPPGYTCA*AILMH 952
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / -1
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 942 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 763
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 762 SPMCTSLPRRSTHTPSLSASMGHVSE 685
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / -3
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 937 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 758
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 757 DVHLVAEEVHAHAELE 710
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 725 TRRA*ARRWGTCPRT 681
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full
insert sequence
Length = 1251
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / +3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 681 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 860
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 861 IPIALKLLVNCGCDVPPGYTCA*AILMH 944
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / -3
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 934 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 755
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 754 SPMCTSLPRRSTHTPSLSASMGHVSE 677
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / -2
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 929 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 750
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 749 DVHLVAEEVHAHAELE 702
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 717 TRRA*ARRWGTCPRT 673
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full
insert sequence
Length = 1242
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / +1
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 685 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 864
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 865 IPIALKLLVNCGCDVPPGYTCA*AILMH 948
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / -2
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 938 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 759
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 758 SPMCTSLPRRSTHTPSLSASMGHVSE 681
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / -1
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 933 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 754
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 753 DVHLVAEEVHAHAELE 706
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 721 TRRA*ARRWGTCPRT 677
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full
insert sequence
Length = 1255
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / +1
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 685 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 864
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 865 IPIALKLLVNCGCDVPPGYTCA*AILMH 948
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / -3
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 938 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 759
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 758 SPMCTSLPRRSTHTPSLSASMGHVSE 681
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / -2
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 933 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 754
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 753 DVHLVAEEVHAHAELE 706
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 721 TRRA*ARRWGTCPRT 677
>gb|AACV01010566.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010566, whole
genome shotgun sequence
Length = 72288
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / +3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 19839 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 20018
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 20019 IPIALKLLVNCGCDVPPGYTCA*AILMH 20102
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / -3
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 20092 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 19913
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 19912 SPMCTSLPRRSTHTPSLSASMGHVSE 19835
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / -2
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 20087 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 19908
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 19907 DVHLVAEEVHAHAELE 19860
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 19875 TRRA*ARRWGTCPRT 19831
>ref|NT_107201.1| Oryza sativa (japonica cultivar-group)
Length = 2893592
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / -3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 222399 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 222220
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 222219 IPIALKLLVNCGCDVPPGYTCA*AILMH 222136
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / +2
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 222146 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 222325
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 222326 SPMCTSLPRRSTHTPSLSASMGHVSE 222403
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / +1
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 222151 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 222330
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 222331 DVHLVAEEVHAHAELE 222378
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 222363 TRRA*ARRWGTCPRT 222407
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / -3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 10494865 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 10494686
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 10494685 IPIALKLLVNCGCDVPPGYTCA*AILMH 10494602
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / +3
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 10494612 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 10494791
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 10494792 SPMCTSLPRRSTHTPSLSASMGHVSE 10494869
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / +2
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 10494617 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 10494796
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 10494797 DVHLVAEEVHAHAELE 10494844
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 10494829 TRRA*ARRWGTCPRT 10494873
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / -3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 29638964 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 29638785
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 29638784 IPIALKLLVNCGCDVPPGYTCA*AILMH 29638701
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / +1
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 29638711 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 29638890
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 29638891 SPMCTSLPRRSTHTPSLSASMGHVSE 29638968
Score = 119 bits (254), Expect = 6e-025
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / +3
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 29638716 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 29638895
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 29638896 DVHLVAEEVHAHAELE 29638943
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05,
complete sequence
Length = 142556
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / -3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 89670 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 89491
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 89490 IPIALKLLVNCGCDVPPGYTCA*AILMH 89407
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / +2
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 89417 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 89596
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 89597 SPMCTSLPRRSTHTPSLSASMGHVSE 89674
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / +1
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 89422 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 89601
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 89602 DVHLVAEEVHAHAELE 89649
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 89634 TRRA*ARRWGTCPRT 89678
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 182 bits (392), Expect = 6e-044
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3 / -3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 32827384 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 32827205
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 32827204 IPIALKLLVNCGCDVPPGYTCA*AILMH 32827121
Score = 141 bits (303), Expect = 1e-031
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = -3 / +3
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 32827131 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 32827310
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS SASMGH+SE
Sbjct: 32827311 SPMCTSLPRRSTHTPSLSASMGHVSE 32827388
Score = 119 bits (254), Expect = 6e-025
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / +2
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 32827136 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 32827315
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 32827316 DVHLVAEEVHAHAELE 32827363
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 783
Score = 180 bits (388), Expect = 2e-043
Identities = 70/83 (84%), Positives = 77/83 (92%)
Frame = +3 / +1
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 535 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 714
Query: 600 VPIALEVLVNCGCEVPPGYKCT* 668
+PIAL++LVNCGC+VPPGY C *
Sbjct: 715 IPIALKLLVNCGCDVPPGYTCA* 783
Score = 141 bits (302), Expect = 1e-031
Identities = 63/84 (75%), Positives = 68/84 (80%)
Frame = -3 / -2
Query: 667 *VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLASP 488
* +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T ASP
Sbjct: 782 *AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASP 603
Query: 487 MCTSFPRMSTHAPSFSASMGHLSE 416
MCTS PR STH PS SASMGH+SE
Sbjct: 602 MCTSLPRRSTHTPSLSASMGHVSE 531
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -2 / -1
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 783 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 604
Query: 488 DVHLVPENVHARAELQ 441
DVHLV E VHA AEL+
Sbjct: 603 DVHLVAEEVHAHAELE 556
Score = 38.2 bits (77), Expect(2) = 2e-030
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 571 TRRA*ARRWGTCPRT 527
>gb|AU095966.1|AU095966 AU095966 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11780, mRNA sequence
Length = 486
Score = 180 bits (387), Expect = 3e-043
Identities = 70/88 (79%), Positives = 77/88 (87%)
Frame = +3 / +2
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDA KLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 17 DTCPIDAXKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 196
Query: 600 VPIALEVLVNCGCEVPPGYKCT*TTPFH 683
+PIAL++LVNCGC+VPPGY C * H
Sbjct: 197 IPIALKLLVNCGCDVPPGYTCA*AILMH 280
Score = 139 bits (299), Expect = 4e-031
Identities = 62/86 (72%), Positives = 68/86 (79%)
Frame = -3 / -1
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T A
Sbjct: 270 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWA 91
Query: 493 SPMCTSFPRMSTHAPSFSASMGHLSE 416
SPMCTS PR STH PS ASMGH+SE
Sbjct: 90 SPMCTSLPRRSTHTPSLXASMGHVSE 13
Score = 118 bits (252), Expect(2) = 1e-029
Identities = 52/75 (69%), Positives = 59/75 (78%)
Frame = -2 / -3
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVA
Sbjct: 265 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVA 86
Query: 488 DVHLVPENVHARAEL 444
DVHLV E VHA AEL
Sbjct: 85 DVHLVAEEVHAHAEL 41
Score = 36.3 bits (73), Expect(2) = 1e-029
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -1 / -2
Query: 456 TRRASARRWGTCPRT 412
TRRA RRWGTCPRT
Sbjct: 53 TRRA*XRRWGTCPRT 9
>gb|AU095885.1|AU095885 AU095885 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11406, mRNA sequence
Length = 542
Score = 134 bits (287), Expect(2) = 4e-038
Identities = 52/67 (77%), Positives = 58/67 (86%)
Frame = +3 / +1
Query: 483 HIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
HIGDA+V CCPLVK IAGLSAAACLCTA KAKVLDIS+Y+PIAL++LVNCGC+VPPGY C
Sbjct: 136 HIGDAHVTCCPLVKDIAGLSAAACLCTAXKAKVLDISIYIPIALKLLVNCGCDVPPGYTC 315
Query: 663 T*TTPFH 683
* H
Sbjct: 316 A*AILMH 336
Score = 94.5 bits (200), Expect(2) = 1e-024
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = -3 / -1
Query: 673 VV*VHL*PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLA 494
+ * +*PGGTSQPQLT + SAMG * MSSTLA MAV R AAA+ PAM FTSGQH+T A
Sbjct: 326 MA*AQV*PGGTSQPQLTRSLSAMGM*MLMSSTLAXMAVQRQAAADRPAMSFTSGQHVTWA 147
Query: 493 SPM 485
SPM
Sbjct: 146 SPM 138
Score = 93.2 bits (197), Expect(2) = 1e-022
Identities = 41/62 (66%), Positives = 48/62 (77%)
Frame = -2 / -3
Query: 668 LSAFVAWRDLAAAVDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVA 489
L A VA RD+AAAVDE L+RDG VD +V+HLGL GGA+A G+ GD LH+RAA VGVA
Sbjct: 321 LGAGVARRDVAAAVDEELERDGDVDADVEHLGLXGGAEAGXGGQAGDVLHQRAARHVGVA 142
Query: 488 DV 483
DV
Sbjct: 141 DV 136
Score = 48.7 bits (100), Expect(2) = 4e-038
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 420 DKCPIDALKLGACVDILGNEV 482
D CPIDALKLG CVD+LGNEV
Sbjct: 72 DTCPIDALKLGVCVDLLGNEV 134
Score = 43.7 bits (89), Expect(2) = 1e-024
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 481 TSFPRMSTHAPSFSASMGHLSE 416
TS PR STH PS SASMGH+SE
Sbjct: 133 TSLPRRSTHTPSLSASMGHVSE 68
Score = 38.2 bits (77), Expect(2) = 1e-022
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 108 TRRA*ARRWGTCPRT 64
>gb|D46826.1|D46826 RICS11741A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 222
Score = 148 bits (317), Expect = 1e-033
Identities = 59/70 (84%), Positives = 65/70 (92%)
Frame = +3 / +3
Query: 420 DKCPIDALKLGACVDILGNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 599
D CPIDALKLG CVD+LGNEVHIGDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 12 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 191
Query: 600 VPIALEVLVN 629
+PI L++LVN
Sbjct: 192 IPIELKLLVN 221
Score = 115 bits (246), Expect = 8e-024
Identities = 51/70 (72%), Positives = 56/70 (80%)
Frame = -3 / -3
Query: 628 LTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLASPMCTSFPRMSTHAP 449
LT + S+MG * MSSTLALMAV R AAA+ PAM FTSGQH+T ASPMCTS PR STH P
Sbjct: 220 LTRSLSSMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCTSLPRRSTHTP 41
Query: 448 SFSASMGHLS 419
S SASMGH+S
Sbjct: 40 SLSASMGHVS 11
Score = 100 bits (213), Expect(2) = 5e-025
Identities = 42/63 (66%), Positives = 49/63 (77%)
Frame = -2 / -2
Query: 629 VDEHLQRDGHVDGNVQHLGLDGGAQARRRGEPGDALHERAALDVGVADVHLVPENVHARA 450
VDE L+ DG VD +V+HLGLDGGA+A G+ GD LH+RAA VGVADVHLV E VHA A
Sbjct: 221 VDEELELDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARXVGVADVHLVAEEVHAHA 42
Query: 449 ELQ 441
EL+
Sbjct: 41 ELE 33
Score = 38.2 bits (77), Expect(2) = 5e-025
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 456 TRRASARRWGTCPRT 412
TRRA ARRWGTCPRT
Sbjct: 48 TRRA*ARRWGTCPRT 4
>gb|AU095985.1|AU095985 AU095985 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11820, mRNA sequence
Length = 537
Score = 145 bits (311), Expect = 9e-033
Identities = 57/71 (80%), Positives = 62/71 (87%)
Frame = +3 / +3
Query: 471 GNEVHIGDANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPP 650
GNEVHIGDA V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y+PIAL++LVNCGC+VPP
Sbjct: 3 GNEVHIGDAXVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIYIPIALKLLVNCGCDVPP 182
Query: 651 GYKCT*TTPFH 683
GY C * H
Sbjct: 183 GYTCA*AILMH 215
Score = 106 bits (227), Expect = 3e-021
Identities = 47/61 (77%), Positives = 50/61 (81%)
Frame = -3 / -3
Query: 652 PGGTSQPQLTSTSSAMGT*TEMSSTLALMAVHRHAAAESPAMPFTSGQHLTLASPMCTSF 473
PGGTSQPQLT + SAMG * MSSTLALMAV R AAA+ PAM FTSGQH+T ASPMCTS
Sbjct: 184 PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTXASPMCTSL 5
Query: 472 P 470
P
Sbjct: 4 P 2
>gb|AU096374.1|AU096374 AU096374 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13621, mRNA sequence
Length = 572
Score = 101 bits (215), Expect(3) = 7e-029
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3 / +2
Query: 534 GLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKCT*TTPFH 683
GLSAAACLCTAIKAKVLDIS+Y+PIAL++LVNCGC+VPPGY C * H
Sbjct: 101 GLSAAACLCTAIKAKVLDISIYIPIALKLLVNCGCDVPPGYTCA*AILMH 250
Score = 46.0 bits (94), Expect(3) = 7e-029
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / +1
Query: 471 GNEVHIGDANVKCCPLVKGI 530
GNEVHIGDA+V CCPLVK I
Sbjct: 37 GNEVHIGDAHVTCCPLVKXI 96
Score = 22.6 bits (43), Expect(3) = 7e-029
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 438 ALKLGACVDIL 470
ALK G CVD+L
Sbjct: 3 ALKXGVCVDLL 35
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full
insert sequence
Length = 992
Score = 96.8 bits (205), Expect(3) = 9e-026
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / +2
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 587 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 754
Score = 43.7 bits (89), Expect(3) = 9e-026
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 509 CPIDALKLNACVDVLGGLIHL 571
Score = 24.0 bits (46), Expect(3) = 9e-026
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3 / +3
Query: 138 KAEPECHSCESGSPPS 185
++ P C SC S S PS
Sbjct: 45 RSPPSCLSCSSSSSPS 92
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 992
Score = 96.8 bits (205), Expect(3) = 9e-026
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / +2
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 587 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 754
Score = 43.7 bits (89), Expect(3) = 9e-026
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 509 CPIDALKLNACVDVLGGLIHL 571
Score = 24.0 bits (46), Expect(3) = 9e-026
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3 / +3
Query: 138 KAEPECHSCESGSPPS 185
++ P C SC S S PS
Sbjct: 45 RSPPSCLSCSSSSSPS 92
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full
insert sequence
Length = 1013
Score = 96.8 bits (205), Expect(3) = 9e-026
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / +2
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 587 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 754
Score = 43.7 bits (89), Expect(3) = 9e-026
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 509 CPIDALKLNACVDVLGGLIHL 571
Score = 24.0 bits (46), Expect(3) = 9e-026
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3 / +3
Query: 138 KAEPECHSCESGSPPS 185
++ P C SC S S PS
Sbjct: 45 RSPPSCLSCSSSSSPS 92
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full
insert sequence
Length = 1384
Score = 96.8 bits (205), Expect(3) = 2e-025
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / +2
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 1004 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 1171
Score = 43.7 bits (89), Expect(3) = 2e-025
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 926 CPIDALKLNACVDVLGGLIHL 988
Score = 24.0 bits (46), Expect(3) = 2e-025
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3 / +3
Query: 138 KAEPECHSCESGSPPS 185
++ P C SC S S PS
Sbjct: 462 RSPPSCLSCSSSSSPS 509
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / -2
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 3345137 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 3344970
Score = 43.7 bits (89), Expect(2) = 2e-025
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / -2
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 3345215 CPIDALKLNACVDVLGGLIHL 3345153
>ref|NT_079872.2| Oryza sativa (japonica cultivar-group)
Length = 1124013
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / -1
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 543249 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 543082
Score = 43.7 bits (89), Expect(2) = 2e-025
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / -1
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 543327 CPIDALKLNACVDVLGGLIHL 543265
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
P0680A03
Length = 156054
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / -1
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 146772 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 146605
Score = 43.7 bits (89), Expect(2) = 2e-025
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / -1
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 146850 CPIDALKLNACVDVLGGLIHL 146788
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0033B09
Length = 143545
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / -2
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 71922 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 71755
Score = 43.7 bits (89), Expect(2) = 2e-025
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / -2
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 72000 CPIDALKLNACVDVLGGLIHL 71938
>gb|AACV01013105.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013105, whole
genome shotgun sequence
Length = 17541
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / +3
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 16293 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 16460
Score = 43.7 bits (89), Expect(2) = 2e-025
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / +3
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 16215 CPIDALKLNACVDVLGGLIHL 16277
>gb|AU078328.1|AU078328 AU078328 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11111_4Z, mRNA sequence
Length = 619
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = +3 / +1
Query: 495 ANVKCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKC 662
A KCCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 229 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 396
Score = 43.7 bits (89), Expect(2) = 2e-025
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / +1
Query: 426 CPIDALKLGACVDILGNEVHI 488
CPIDALKL ACVD+LG +H+
Sbjct: 151 CPIDALKLNACVDVLGGLIHL 213
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 87.2 bits (184), Expect(2) = 7e-024
Identities = 29/54 (53%), Positives = 43/54 (79%)
Frame = +3 / +2
Query: 504 KCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKCT 665
KCCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C+
Sbjct: 7185845 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTCS 7186006
Score = 47.8 bits (98), Expect(2) = 7e-024
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 423 KCPIDALKLGACVDILGNEVHIG 491
+CP+D+LK+GACVD+LG VH+G
Sbjct: 7185755 RCPVDSLKIGACVDLLGGLVHVG 7185823
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 87.2 bits (184), Expect(2) = 7e-024
Identities = 29/54 (53%), Positives = 43/54 (79%)
Frame = +3 / +2
Query: 504 KCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKCT 665
KCCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C+
Sbjct: 3309632 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTCS 3309793
Score = 47.8 bits (98), Expect(2) = 7e-024
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 423 KCPIDALKLGACVDILGNEVHIG 491
+CP+D+LK+GACVD+LG VH+G
Sbjct: 3309542 RCPVDSLKIGACVDLLGGLVHVG 3309610
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0416A11
Length = 171519
Score = 87.2 bits (184), Expect(2) = 8e-024
Identities = 29/54 (53%), Positives = 43/54 (79%)
Frame = +3 / +3
Query: 504 KCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKCT 665
KCCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C+
Sbjct: 126351 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTCS 126512
Score = 47.8 bits (98), Expect(2) = 8e-024
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 423 KCPIDALKLGACVDILGNEVHIG 491
+CP+D+LK+GACVD+LG VH+G
Sbjct: 126261 RCPVDSLKIGACVDLLGGLVHVG 126329
>gb|AACV01014669.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014669, whole
genome shotgun sequence
Length = 5817
Score = 87.2 bits (184), Expect(2) = 8e-024
Identities = 29/54 (53%), Positives = 43/54 (79%)
Frame = +3 / -2
Query: 504 KCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKCT 665
KCCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C+
Sbjct: 5039 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTCS 4878
Score = 47.8 bits (98), Expect(2) = 8e-024
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3 / -2
Query: 423 KCPIDALKLGACVDILGNEVHIG 491
+CP+D+LK+GACVD+LG VH+G
Sbjct: 5129 RCPVDSLKIGACVDLLGGLVHVG 5061
>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full
insert sequence
Length = 1338
Score = 87.2 bits (184), Expect(2) = 8e-024
Identities = 29/54 (53%), Positives = 43/54 (79%)
Frame = +3 / +2
Query: 504 KCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKCT 665
KCCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C+
Sbjct: 692 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTCS 853
Score = 47.8 bits (98), Expect(2) = 8e-024
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 423 KCPIDALKLGACVDILGNEVHIG 491
+CP+D+LK+GACVD+LG VH+G
Sbjct: 602 RCPVDSLKIGACVDLLGGLVHVG 670
>gb|CD670796.1|CD670796 OsMR213 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 573
Score = 76.7 bits (161), Expect(3) = 5e-021
Identities = 26/48 (54%), Positives = 40/48 (83%)
Frame = +3 / +1
Query: 504 KCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVP 647
KCCPL++G+A L AA CLCT I+ K+L+I++Y+P+AL++L+ CG +P
Sbjct: 403 KCCPLLEGLAELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKTLP 546
Score = 47.8 bits (98), Expect(3) = 5e-021
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 423 KCPIDALKLGACVDILGNEVHIG 491
+CP+D+LK+GACVD+LG VH+G
Sbjct: 313 RCPVDSLKIGACVDLLGGLVHVG 381
Score = 22.1 bits (42), Expect(3) = 5e-021
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2 / +3
Query: 254 PHPTGHPAAPSRRTAAGDPSSHSDH 328
PH +GH RR A P + H
Sbjct: 111 PHTSGHHPPGRRRPAGHLPHTSGHH 185
>gb|CV722569.1|CV722569 YTPSP--01-N18.b1 TPSP-overexpression transgenic rice yeast two
hybrid lambda phage cDNA library (YTPSP) Oryza sativa
(japonica cultivar-group) cDNA clone YTPSP--01-N18, mRNA
sequence
Length = 508
Score = 101 bits (215), Expect(2) = 8e-021
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3 / -2
Query: 534 GLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCEVPPGYKCT*TTPFH 683
GLSAAACLCTAIKAKVLDIS+Y+PIAL++LVNCGC+VPPGY C * H
Sbjct: 435 GLSAAACLCTAIKAKVLDISIYIPIALKLLVNCGCDVPPGYTCA*AILMH 286
Score = 23.5 bits (45), Expect(2) = 8e-021
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / -1
Query: 507 CCPLVKGIA 533
CCPLVK IA
Sbjct: 463 CCPLVKDIA 437
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,185,343,245
Number of Sequences: 438736
Number of extensions: 76743009
Number of successful extensions: 503394
Number of sequences better than 1.0e-020: 52
length of database: 933,473,305
effective HSP length: 60
effective length of database: 907,149,145
effective search space used: 253094611455
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)