TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.203
(959 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU198219.1|AU198219 AU198219 Rice green shoot Oryza sati... 177 1e-044
emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromoso... 177 9e-044
gb|AACV01010566.1| Oryza sativa (japonica cultivar-group) c... 177 9e-044
dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA... 177 9e-044
dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA... 177 9e-044
dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA... 177 9e-044
dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA... 177 9e-044
dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA... 177 9e-044
ref|XM_474092.1| Oryza sativa (japonica cultivar-group), p... 177 9e-044
gb|CB682960.1|CB682960 OSJNEf10M18.f OSJNEf Oryza sativa (j... 177 9e-044
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 177 1e-042
gb|CB681630.1|CB681630 OSJNEf08C09.r OSJNEf Oryza sativa (j... 177 2e-042
gb|CB682961.1|CB682961 OSJNEf10M18.r OSJNEf Oryza sativa (j... 177 2e-042
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 177 2e-042
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 177 2e-042
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 177 2e-042
gb|AU095966.1|AU095966 AU095966 Rice green shoot Oryza sati... 175 9e-042
gb|AU095885.1|AU095885 AU095885 Rice green shoot Oryza sati... 129 1e-036
gb|D46826.1|D46826 RICS11741A Rice green shoot Oryza sativa... 147 2e-033
gb|AU095985.1|AU095985 AU095985 Rice green shoot Oryza sati... 140 2e-031
gb|AU096374.1|AU096374 AU096374 Rice green shoot Oryza sati... 97 2e-027
dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA... 94 4e-025
ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA 94 4e-025
dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA... 94 5e-025
dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA... 94 9e-025
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 94 1e-024
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 94 1e-024
dbj|AB023482.2| Oryza sativa (japonica cultivar-group) geno... 94 1e-024
dbj|AP002864.2| Oryza sativa (japonica cultivar-group) geno... 94 1e-024
gb|AACV01013105.1| Oryza sativa (japonica cultivar-group) c... 94 1e-024
gb|AU078328.1|AU078328 AU078328 Rice panicle at ripening st... 94 1e-024
dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA... 84 7e-024
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 84 6e-023
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 84 6e-023
dbj|AP003523.3| Oryza sativa (japonica cultivar-group) geno... 84 7e-023
gb|AACV01014669.1| Oryza sativa (japonica cultivar-group) c... 84 7e-023
>gb|AU198219.1|AU198219 AU198219 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S16276, mRNA sequence
Length = 453
Score = 177 bits (381), Expect(2) = 1e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / +2
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 188 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 367
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 368 IPIALKLLVNCGCDVPPGYTC 430
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / -1
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 426 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 247
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 246 SLPRRSTHTPSLSASMGHVSE 184
Score = 133 bits (284), Expect = 4e-029
Identities = 61/81 (75%), Positives = 64/81 (79%)
Frame = +2 / -3
Query: 311 AFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPGDALHERAALDVGVADV 490
A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ GD LH+RAA VGVADV
Sbjct: 430 AGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVADV 251
Query: 491 HLVPENVHAGAELERVDGALV 553
HLV E VHA AELERVDGA V
Sbjct: 250 HLVAEEVHAHAELERVDGARV 188
Score = 27.6 bits (54), Expect(2) = 1e-044
Identities = 19/64 (29%), Positives = 24/64 (37%)
Frame = -1 / +1
Query: 755 VSPAAPCQHTVGPPAPCQHTVSAPAAGDPPSHSDRWGKPEPDEEGTPEGVPTASVSPDAD 576
VSP + P + + +A A G S S K EEG P +V PDA
Sbjct: 1 VSPPLSVASSEASPRLSEESSAAAAGGGGYSPSPSPPKRHGXEEGVPAIADADAVHPDAV 180
Query: 575 THAH 564
H
Sbjct: 181 VLGH 192
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05,
complete sequence
Length = 142556
Score = 177 bits (381), Expect(2) = 9e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / -3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 89670 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 89491
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 89490 IPIALKLLVNCGCDVPPGYTC 89428
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / +2
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 89432 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 89611
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 89612 SLPRRSTHTPSLSASMGHVSE 89674
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / +1
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 89380 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 89559
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 89560 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 89670
Score = 24.4 bits (47), Expect(2) = 9e-044
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / -2
Query: 644 KPEPDEEGTPEGVPTASVSPDADTHAHAVLGQVPH 540
+PEP E E A DA VLG VPH
Sbjct: 89761 EPEPAEATRREEGVPAIADADAVHPDAVVLGHVPH 89657
>gb|AACV01010566.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010566, whole
genome shotgun sequence
Length = 72288
Score = 177 bits (381), Expect(2) = 9e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / +3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 19839 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 20018
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 20019 IPIALKLLVNCGCDVPPGYTC 20081
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / -3
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 20077 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 19898
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 19897 SLPRRSTHTPSLSASMGHVSE 19835
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / -2
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 20129 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 19950
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 19949 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 19839
Score = 24.4 bits (47), Expect(2) = 9e-044
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / +2
Query: 644 KPEPDEEGTPEGVPTASVSPDADTHAHAVLGQVPH 540
+PEP E E A DA VLG VPH
Sbjct: 19748 EPEPAEATRREEGVPAIADADAVHPDAVVLGHVPH 19852
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full
insert sequence
Length = 1272
Score = 177 bits (381), Expect(2) = 9e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / +2
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 689 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 868
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 869 IPIALKLLVNCGCDVPPGYTC 931
Score = 135 bits (289), Expect(2) = 2e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / -1
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 927 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 748
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 747 SLPRRSTHTPSLSASMGHVSE 685
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / -3
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 979 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 800
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 799 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 689
Score = 25.4 bits (49), Expect(2) = 2e-030
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3 / -1
Query: 843 HARASGDXXXXXXXXXXXXXXLVDSI 920
HARASG+ LVDSI
Sbjct: 141 HARASGEEESASMASRSIAETLVDSI 64
Score = 24.4 bits (47), Expect(2) = 9e-044
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / +1
Query: 644 KPEPDEEGTPEGVPTASVSPDADTHAHAVLGQVPH 540
+PEP E E A DA VLG VPH
Sbjct: 598 EPEPAEATRREEGVPAIADADAVHPDAVVLGHVPH 702
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full
insert sequence
Length = 1257
Score = 177 bits (381), Expect(2) = 9e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / +3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 687 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 866
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 867 IPIALKLLVNCGCDVPPGYTC 929
Score = 135 bits (289), Expect(2) = 2e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / -3
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 925 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 746
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 745 SLPRRSTHTPSLSASMGHVSE 683
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / -2
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 977 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 798
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 797 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 687
Score = 25.4 bits (49), Expect(2) = 2e-030
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3 / -3
Query: 843 HARASGDXXXXXXXXXXXXXXLVDSI 920
HARASG+ LVDSI
Sbjct: 139 HARASGEEESASMASRSIAETLVDSI 62
Score = 24.4 bits (47), Expect(2) = 9e-044
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / +2
Query: 644 KPEPDEEGTPEGVPTASVSPDADTHAHAVLGQVPH 540
+PEP E E A DA VLG VPH
Sbjct: 596 EPEPAEATRREEGVPAIADADAVHPDAVVLGHVPH 700
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full
insert sequence
Length = 1255
Score = 177 bits (381), Expect(2) = 9e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / +1
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 685 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 864
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 865 IPIALKLLVNCGCDVPPGYTC 927
Score = 135 bits (289), Expect(2) = 2e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / -3
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 923 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 744
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 743 SLPRRSTHTPSLSASMGHVSE 681
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / -2
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 975 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 796
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 795 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 685
Score = 25.4 bits (49), Expect(2) = 2e-030
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3 / -3
Query: 843 HARASGDXXXXXXXXXXXXXXLVDSI 920
HARASG+ LVDSI
Sbjct: 137 HARASGEEESASMASRSIAETLVDSI 60
Score = 24.4 bits (47), Expect(2) = 9e-044
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / +3
Query: 644 KPEPDEEGTPEGVPTASVSPDADTHAHAVLGQVPH 540
+PEP E E A DA VLG VPH
Sbjct: 594 EPEPAEATRREEGVPAIADADAVHPDAVVLGHVPH 698
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full
insert sequence
Length = 1251
Score = 177 bits (381), Expect(2) = 9e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / +3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 681 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 860
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 861 IPIALKLLVNCGCDVPPGYTC 923
Score = 135 bits (289), Expect(2) = 2e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / -3
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 919 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 740
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 739 SLPRRSTHTPSLSASMGHVSE 677
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / -2
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 971 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 792
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 791 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 681
Score = 25.4 bits (49), Expect(2) = 2e-030
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3 / -3
Query: 843 HARASGDXXXXXXXXXXXXXXLVDSI 920
HARASG+ LVDSI
Sbjct: 133 HARASGEEESASMASRSIAETLVDSI 56
Score = 24.4 bits (47), Expect(2) = 9e-044
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / +2
Query: 644 KPEPDEEGTPEGVPTASVSPDADTHAHAVLGQVPH 540
+PEP E E A DA VLG VPH
Sbjct: 590 EPEPAEATRREEGVPAIADADAVHPDAVVLGHVPH 694
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full
insert sequence
Length = 1242
Score = 177 bits (381), Expect(2) = 9e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / +1
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 685 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 864
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 865 IPIALKLLVNCGCDVPPGYTC 927
Score = 135 bits (289), Expect(2) = 2e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / -2
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 923 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 744
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 743 SLPRRSTHTPSLSASMGHVSE 681
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / -1
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 975 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 796
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 795 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 685
Score = 25.4 bits (49), Expect(2) = 2e-030
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3 / -2
Query: 843 HARASGDXXXXXXXXXXXXXXLVDSI 920
HARASG+ LVDSI
Sbjct: 137 HARASGEEESASMASRSIAETLVDSI 60
Score = 24.4 bits (47), Expect(2) = 9e-044
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / +3
Query: 644 KPEPDEEGTPEGVPTASVSPDADTHAHAVLGQVPH 540
+PEP E E A DA VLG VPH
Sbjct: 594 EPEPAEATRREKGVPAIADADAVHPDAVVLGHVPH 698
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 783
Score = 177 bits (381), Expect(2) = 9e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / +1
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 535 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 714
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 715 IPIALKLLVNCGCDVPPGYTC 777
Score = 135 bits (289), Expect(2) = 4e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / -2
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 773 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 594
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 593 SLPRRSTHTPSLSASMGHVSE 531
Score = 133 bits (284), Expect = 4e-029
Identities = 61/81 (75%), Positives = 64/81 (79%)
Frame = +2 / -1
Query: 311 AFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPGDALHERAALDVGVADV 490
A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ GD LH+RAA VGVADV
Sbjct: 777 AGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARHVGVADV 598
Query: 491 HLVPENVHAGAELERVDGALV 553
HLV E VHA AELERVDGA V
Sbjct: 597 HLVAEEVHAHAELERVDGARV 535
Score = 24.4 bits (47), Expect(2) = 9e-044
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / +3
Query: 644 KPEPDEEGTPEGVPTASVSPDADTHAHAVLGQVPH 540
+PEP E E A DA VLG VPH
Sbjct: 444 EPEPAEATRREEGVPAIADADAVHPDAVVLGHVPH 548
Score = 23.5 bits (45), Expect(2) = 4e-030
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3 / -2
Query: 843 HARASGDXXXXXXXXXXXXXXLVDS 917
HARASG+ LVDS
Sbjct: 77 HARASGEEESASMASRSIAETLVDS 3
>gb|CB682960.1|CB682960 OSJNEf10M18.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10M18 5', mRNA sequence
Length = 717
Score = 177 bits (381), Expect(2) = 9e-044
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / +3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 396 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 575
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 576 IPIALKLLVNCGCDVPPGYTC 638
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / -3
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 634 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 455
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 454 SLPRRSTHTPSLSASMGHVSE 392
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / -2
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 686 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 507
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 506 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 396
Score = 24.4 bits (47), Expect(2) = 9e-044
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / +2
Query: 644 KPEPDEEGTPEGVPTASVSPDADTHAHAVLGQVPH 540
+PEP E E A DA VLG VPH
Sbjct: 305 EPEPAEATRREEGVPAIADADAVHPDAVVLGHVPH 409
>ref|NT_107201.1| Oryza sativa (japonica cultivar-group)
Length = 2893592
Score = 177 bits (381), Expect(2) = 1e-042
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / -3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 222399 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 222220
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 222219 IPIALKLLVNCGCDVPPGYTC 222157
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / +2
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 222161 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 222340
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 222341 SLPRRSTHTPSLSASMGHVSE 222403
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / +1
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 222109 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 222288
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 222289 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 222399
Score = 35.0 bits (70), Expect(2) = 1e-042
Identities = 22/72 (30%), Positives = 25/72 (34%)
Frame = -1 / -3
Query: 785 RRPPASRQHTVSPAAPCQHTVGPPAPCQHTVSAPAAGDPPSHSDRWGKPEPDEEGTPEGV 606
R P R PAA P + + AP A PPS P GTP
Sbjct: 2093760 RAPTTRR*SPPPPAAASSSRPPSTCPRRGSPPAPPASPPPSPPATASWPSGSR*GTPAPS 2093581
Query: 605 PTASVSPDADTH 570
P S PD +H
Sbjct: 2093580 PPRSSYPDQSSH 2093545
>gb|CB681630.1|CB681630 OSJNEf08C09.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf08C09 3', mRNA sequence
Length = 642
Score = 177 bits (381), Expect = 2e-042
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / -1
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 606 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 427
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 426 IPIALKLLVNCGCDVPPGYTC 364
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / +2
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 368 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 547
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 548 SLPRRSTHTPSLSASMGHVSE 610
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / +1
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 316 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 495
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 496 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 606
>gb|CB682961.1|CB682961 OSJNEf10M18.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10M18 3', mRNA sequence
Length = 635
Score = 177 bits (381), Expect = 2e-042
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / -1
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 611 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 432
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 431 IPIALKLLVNCGCDVPPGYTC 369
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / +1
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 373 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 552
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 553 SLPRRSTHTPSLSASMGHVSE 615
Score = 133 bits (285), Expect = 3e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / +3
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG V+ DVEHLGLDGGAKA G+ G
Sbjct: 321 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVNADVEHLGLDGGAKAGGGGQAG 500
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 501 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 611
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 177 bits (381), Expect = 2e-042
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / -3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 10494865 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 10494686
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 10494685 IPIALKLLVNCGCDVPPGYTC 10494623
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / +3
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 10494627 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 10494806
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 10494807 SLPRRSTHTPSLSASMGHVSE 10494869
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / +2
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 10494575 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 10494754
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 10494755 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 10494865
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 177 bits (381), Expect = 2e-042
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / -3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 29638964 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 29638785
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 29638784 IPIALKLLVNCGCDVPPGYTC 29638722
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / +1
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 29638726 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 29638905
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 29638906 SLPRRSTHTPSLSASMGHVSE 29638968
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / +3
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 29638674 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 29638853
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 29638854 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 29638964
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 177 bits (381), Expect = 2e-042
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = -2 / -3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 32827384 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 32827205
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 32827204 IPIALKLLVNCGCDVPPGYTC 32827142
Score = 135 bits (289), Expect = 9e-030
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = +3 / +3
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 32827146 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 32827325
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSLSASMGH+SE
Sbjct: 32827326 SLPRRSTHTPSLSASMGHVSE 32827388
Score = 133 bits (286), Expect = 2e-029
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = +2 / +2
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 32827094 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 32827273
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AELERVDGA V
Sbjct: 32827274 DVLHQRAARHVGVADVHLVAEEVHAHAELERVDGARV 32827384
>gb|AU095966.1|AU095966 AU095966 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11780, mRNA sequence
Length = 486
Score = 175 bits (376), Expect = 9e-042
Identities = 67/81 (82%), Positives = 74/81 (91%)
Frame = -2 / +2
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDA KLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 17 DTCPIDAXKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 196
Query: 373 VPIALEVLVNCGCAVPPGYKC 311
+PIAL++LVNCGC VPPGY C
Sbjct: 197 IPIALKLLVNCGCDVPPGYTC 259
Score = 133 bits (285), Expect = 3e-029
Identities = 60/81 (74%), Positives = 65/81 (80%)
Frame = +3 / -1
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCT 494
+*PGGT+QPQLT + SAMG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CT
Sbjct: 255 V*PGGTSQPQLTRSLSAMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCT 76
Query: 495 SFPRTSTQAPSLSASMGHLSE 557
S PR ST PSL ASMGH+SE
Sbjct: 75 SLPRRSTHTPSLXASMGHVSE 13
Score = 131 bits (280), Expect = 2e-028
Identities = 63/97 (64%), Positives = 69/97 (71%)
Frame = +2 / -3
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGLDGGA+A G+ G
Sbjct: 307 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLDGGAEAGGGGQAG 128
Query: 443 DALHERAALDVGVADVHLVPENVHAGAELERVDGALV 553
D LH+RAA VGVADVHLV E VHA AEL RVDGA V
Sbjct: 127 DVLHQRAARHVGVADVHLVAEEVHAHAELXRVDGARV 17
>gb|AU095885.1|AU095885 AU095885 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11406, mRNA sequence
Length = 542
Score = 129 bits (277), Expect(2) = 1e-036
Identities = 49/60 (81%), Positives = 55/60 (91%)
Frame = -2 / +1
Query: 490 HVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
H+GDA+V CCPLVK IAGLSAAACLCTA KAKVLDIS+Y+PIAL++LVNCGC VPPGY C
Sbjct: 136 HIGDAHVTCCPLVKDIAGLSAAACLCTAXKAKVLDISIYIPIALKLLVNCGCDVPPGYTC 315
Score = 95.0 bits (201), Expect(2) = 2e-024
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2 / -3
Query: 263 RVLGGNGNGMGWNRSSAFVAWRDGAAAVDEHLERDGHVDGDVEHLGLDGGAKARRRGEPG 442
R + G G + + A VA RD AAAVDE LERDG VD DVEHLGL GGA+A G+ G
Sbjct: 363 RDVHGLGRDVHEDGLGAGVARRDVAAAVDEELERDGDVDADVEHLGLXGGAEAGXGGQAG 184
Query: 443 DALHERAALDVGVADV 490
D LH+RAA VGVADV
Sbjct: 183 DVLHQRAARHVGVADV 136
Score = 90.4 bits (191), Expect(2) = 3e-022
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +3 / -1
Query: 315 L*PGGTAQPQLTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASP 485
+*PGGT+QPQLT + SAMG * MSSTLA MAVQR AAA+ PAM FTSGQH T ASP
Sbjct: 311 V*PGGTSQPQLTRSLSAMGM*MLMSSTLAXMAVQRQAAADRPAMSFTSGQHVTWASP 141
Score = 48.3 bits (99), Expect(2) = 1e-036
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / +3
Query: 553 DKCPIDALKLGACVDVLGNEV 491
D CPIDALKLG CVD+LGNEV
Sbjct: 72 DTCPIDALKLGVCVDLLGNEV 134
Score = 41.8 bits (85), Expect(2) = 2e-024
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / -2
Query: 492 TSFPRTSTQAPSLSASMGHLSE 557
TS PR ST PSLSASMGH+SE
Sbjct: 133 TSLPRRSTHTPSLSASMGHVSE 68
Score = 39.1 bits (79), Expect(2) = 3e-022
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +2 / -1
Query: 491 HLVPENVHAGAELERVDGALV 553
HLV E VHA AELERVDGA V
Sbjct: 134 HLVAEEVHAHAELERVDGARV 72
>gb|D46826.1|D46826 RICS11741A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 222
Score = 147 bits (315), Expect = 2e-033
Identities = 58/70 (82%), Positives = 65/70 (92%)
Frame = -2 / +3
Query: 553 DKCPIDALKLGACVDVLGNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVY 374
D CPIDALKLG CVD+LGNEVH+GDA+V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y
Sbjct: 12 DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 191
Query: 373 VPIALEVLVN 344
+PI L++LVN
Sbjct: 192 IPIELKLLVN 221
Score = 117 bits (251), Expect = 2e-024
Identities = 52/70 (74%), Positives = 55/70 (78%)
Frame = +2 / -2
Query: 344 VDEHLERDGHVDGDVEHLGLDGGAKARRRGEPGDALHERAALDVGVADVHLVPENVHAGA 523
VDE LE DG VD DVEHLGLDGGA+A G+ GD LH+RAA VGVADVHLV E VHA A
Sbjct: 221 VDEELELDGDVDADVEHLGLDGGAEAGGGGQAGDVLHQRAARXVGVADVHLVAEEVHAHA 42
Query: 524 ELERVDGALV 553
ELERVDGA V
Sbjct: 41 ELERVDGARV 12
Score = 111 bits (237), Expect = 1e-022
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = +3 / -3
Query: 345 LTSTSSAMGT*TEMSSTLALMAVQRHAAAESPAMPFTSGQHWTLASPTCTSFPRTSTQAP 524
LT + S+MG * MSSTLALMAVQR AAA+ PAM FTSGQH T ASP CTS PR ST P
Sbjct: 220 LTRSLSSMGM*MLMSSTLALMAVQRQAAADRPAMSFTSGQHVTWASPMCTSLPRRSTHTP 41
Query: 525 SLSASMGHLS 554
SLSASMGH+S
Sbjct: 40 SLSASMGHVS 11
>gb|AU095985.1|AU095985 AU095985 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11820, mRNA sequence
Length = 537
Score = 140 bits (301), Expect = 2e-031
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = -2 / +3
Query: 502 GNEVHVGDANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPP 323
GNEVH+GDA V CCPLVK IAGLSAAACLCTAIKAKVLDIS+Y+PIAL++LVNCGC VPP
Sbjct: 3 GNEVHIGDAXVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIYIPIALKLLVNCGCDVPP 182
Query: 322 GYKC 311
GY C
Sbjct: 183 GYTC 194
>gb|AU096374.1|AU096374 AU096374 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13621, mRNA sequence
Length = 572
Score = 97.3 bits (206), Expect(3) = 2e-027
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = -2 / +2
Query: 439 GLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
GLSAAACLCTAIKAKVLDIS+Y+PIAL++LVNCGC VPPGY C
Sbjct: 101 GLSAAACLCTAIKAKVLDISIYIPIALKLLVNCGCDVPPGYTC 229
Score = 45.5 bits (93), Expect(3) = 2e-027
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -2 / +1
Query: 502 GNEVHVGDANVQCCPLVKGI 443
GNEVH+GDA+V CCPLVK I
Sbjct: 37 GNEVHIGDAHVTCCPLVKXI 96
Score = 22.1 bits (42), Expect(3) = 2e-027
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 535 ALKLGACVDVL 503
ALK G CVD+L
Sbjct: 3 ALKXGVCVDLL 35
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full
insert sequence
Length = 992
Score = 94.1 bits (199), Expect(3) = 4e-025
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / +2
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 587 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 754
Score = 43.7 bits (89), Expect(3) = 4e-025
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 509 CPIDALKLNACVDVLGGLIHL 571
Score = 24.0 bits (46), Expect(3) = 4e-025
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +3
Query: 838 KAEPECHSCESGSPPS 791
++ P C SC S S PS
Sbjct: 45 RSPPSCLSCSSSSSPS 92
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 992
Score = 94.1 bits (199), Expect(3) = 4e-025
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / +2
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 587 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 754
Score = 43.7 bits (89), Expect(3) = 4e-025
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 509 CPIDALKLNACVDVLGGLIHL 571
Score = 24.0 bits (46), Expect(3) = 4e-025
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +3
Query: 838 KAEPECHSCESGSPPS 791
++ P C SC S S PS
Sbjct: 45 RSPPSCLSCSSSSSPS 92
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full
insert sequence
Length = 1013
Score = 94.1 bits (199), Expect(3) = 5e-025
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / +2
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 587 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 754
Score = 43.7 bits (89), Expect(3) = 5e-025
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 509 CPIDALKLNACVDVLGGLIHL 571
Score = 24.0 bits (46), Expect(3) = 5e-025
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +3
Query: 838 KAEPECHSCESGSPPS 791
++ P C SC S S PS
Sbjct: 45 RSPPSCLSCSSSSSPS 92
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full
insert sequence
Length = 1384
Score = 94.1 bits (199), Expect(3) = 9e-025
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / +2
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 1004 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 1171
Score = 43.7 bits (89), Expect(3) = 9e-025
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 926 CPIDALKLNACVDVLGGLIHL 988
Score = 24.0 bits (46), Expect(3) = 9e-025
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +3
Query: 838 KAEPECHSCESGSPPS 791
++ P C SC S S PS
Sbjct: 462 RSPPSCLSCSSSSSPS 509
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 94.1 bits (199), Expect(2) = 1e-024
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / -2
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 3345137 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 3344970
Score = 43.7 bits (89), Expect(2) = 1e-024
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / -2
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 3345215 CPIDALKLNACVDVLGGLIHL 3345153
>ref|NT_079872.2| Oryza sativa (japonica cultivar-group)
Length = 1124013
Score = 94.1 bits (199), Expect(2) = 1e-024
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / -1
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 543249 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 543082
Score = 43.7 bits (89), Expect(2) = 1e-024
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / -1
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 543327 CPIDALKLNACVDVLGGLIHL 543265
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
P0680A03
Length = 156054
Score = 94.1 bits (199), Expect(2) = 1e-024
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / -1
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 146772 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 146605
Score = 43.7 bits (89), Expect(2) = 1e-024
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / -1
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 146850 CPIDALKLNACVDVLGGLIHL 146788
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0033B09
Length = 143545
Score = 94.1 bits (199), Expect(2) = 1e-024
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / -2
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 71922 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 71755
Score = 43.7 bits (89), Expect(2) = 1e-024
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / -2
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 72000 CPIDALKLNACVDVLGGLIHL 71938
>gb|AACV01013105.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013105, whole
genome shotgun sequence
Length = 17541
Score = 94.1 bits (199), Expect(2) = 1e-024
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / +3
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 16293 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 16460
Score = 43.7 bits (89), Expect(2) = 1e-024
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 16215 CPIDALKLNACVDVLGGLIHL 16277
>gb|AU078328.1|AU078328 AU078328 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11111_4Z, mRNA sequence
Length = 619
Score = 94.1 bits (199), Expect(2) = 1e-024
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = -2 / +1
Query: 478 ANVQCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
A +CCPLV+G+A L AA CLCT I+A++L+I++Y+P+ALE+L+ CG PPG+KC
Sbjct: 229 ARAKCCPLVQGVADLDAALCLCTTIRARLLNINIYLPVALELLITCGKHPPPGFKC 396
Score = 43.7 bits (89), Expect(2) = 1e-024
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 547 CPIDALKLGACVDVLGNEVHV 485
CPIDALKL ACVDVLG +H+
Sbjct: 151 CPIDALKLNACVDVLGGLIHL 213
>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full
insert sequence
Length = 1338
Score = 84.0 bits (177), Expect(3) = 7e-024
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = -2 / +2
Query: 469 QCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
+CCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C
Sbjct: 692 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTC 850
Score = 47.8 bits (98), Expect(3) = 7e-024
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -2 / +2
Query: 550 KCPIDALKLGACVDVLGNEVHVG 482
+CP+D+LK+GACVD+LG VHVG
Sbjct: 602 RCPVDSLKIGACVDLLGGLVHVG 670
Score = 26.7 bits (52), Expect(3) = 7e-024
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -1 / +3
Query: 788 RRRPPASRQHTVSPAAPCQHTVGPPAPCQHTVSAPAAGDPPSHS 657
R R PA R+ + P +P P+P + P PP S
Sbjct: 300 RLRSPARRRSSPLPRSPSPTRRRAPSPVRRRSPTPHLRSPPPRS 431
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 84.0 bits (177), Expect(2) = 6e-023
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = -2 / +2
Query: 469 QCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
+CCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C
Sbjct: 7185845 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTC 7186003
Score = 47.8 bits (98), Expect(2) = 6e-023
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -2 / +2
Query: 550 KCPIDALKLGACVDVLGNEVHVG 482
+CP+D+LK+GACVD+LG VHVG
Sbjct: 7185755 RCPVDSLKIGACVDLLGGLVHVG 7185823
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 84.0 bits (177), Expect(2) = 6e-023
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = -2 / +2
Query: 469 QCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
+CCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C
Sbjct: 3309632 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTC 3309790
Score = 47.8 bits (98), Expect(2) = 6e-023
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -2 / +2
Query: 550 KCPIDALKLGACVDVLGNEVHVG 482
+CP+D+LK+GACVD+LG VHVG
Sbjct: 3309542 RCPVDSLKIGACVDLLGGLVHVG 3309610
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0416A11
Length = 171519
Score = 84.0 bits (177), Expect(2) = 7e-023
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = -2 / +3
Query: 469 QCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
+CCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C
Sbjct: 126351 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTC 126509
Score = 47.8 bits (98), Expect(2) = 7e-023
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -2 / +3
Query: 550 KCPIDALKLGACVDVLGNEVHVG 482
+CP+D+LK+GACVD+LG VHVG
Sbjct: 126261 RCPVDSLKIGACVDLLGGLVHVG 126329
>gb|AACV01014669.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014669, whole
genome shotgun sequence
Length = 5817
Score = 84.0 bits (177), Expect(2) = 7e-023
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = -2 / -2
Query: 469 QCCPLVKGIAGLSAAACLCTAIKAKVLDISVYVPIALEVLVNCGCAVPPGYKC 311
+CCPL++G+ L AA CLCT I+ K+L+I++Y+P+AL++L+ CG PPGY C
Sbjct: 5039 KCCPLLEGLVELEAAVCLCTTIRLKLLNINIYLPLALQLLLTCGKNPPPGYTC 4881
Score = 47.8 bits (98), Expect(2) = 7e-023
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -2 / -2
Query: 550 KCPIDALKLGACVDVLGNEVHVG 482
+CP+D+LK+GACVD+LG VHVG
Sbjct: 5129 RCPVDSLKIGACVDLLGGLVHVG 5061
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,292,949,229
Number of Sequences: 438736
Number of extensions: 87839778
Number of successful extensions: 849267
Number of sequences better than 1.0e-020: 49
length of database: 933,473,305
effective HSP length: 60
effective length of database: 907,149,145
effective search space used: 234951628555
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)