TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH10g11.yg.2.1
(632 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORK... 426 e-118
gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKI... 426 e-118
emb|CR350839.1| mte1-86C17FM1 BAC end, cultivar Jemalong A1... 212 1e-063
gb|CB893638.1|CB893638 EST646430 HOGA Medicago truncatula c... 221 2e-061
gb|AC158209.13| Medicago truncatula clone mth2-154h5, compl... 90 1e-057
gb|AC137603.16| Medicago truncatula clone mth2-14b10, compl... 86 1e-056
gb|AC170583.6| Medicago truncatula clone mth2-19b5, complet... 86 1e-056
gb|AC157648.18| Medicago truncatula clone mth2-68d9, comple... 77 6e-050
gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKIN... 77 2e-049
gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone m... 80 1e-047
gb|AC122723.6| Medicago truncatula clone mth2-5i15, complet... 80 1e-047
gb|AJ500423.1|AJ500423 AJ500423 MTGIM Medicago truncatula c... 174 2e-047
emb|CR351348.1| mte1-86D18FM1 BAC end, cultivar Jemalong A1... 188 7e-047
gb|CB893388.1|CB893388 EST646180 HOGA Medicago truncatula c... 154 2e-041
emb|CR496523.1| mth2-172K11FM2 BAC end, cultivar Jemalong A... 85 7e-037
emb|CR318117.1| mte1-43G7RM1 BAC end, cultivar Jemalong A17... 77 5e-032
emb|CR322977.1| mte1-5H7RM1 BAC end, cultivar Jemalong A17 ... 77 6e-032
gb|DW015121.1|DW015121 EST1224082 MTY Medicago truncatula c... 136 3e-031
gb|AW696467.2|AW696467 NF106E12ST1F1098 Developing stem Med... 111 1e-029
gb|BF636038.1|BF636038 NF069A09DT1F1068 Drought Medicago tr... 105 5e-022
>gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORKING DRAFT SEQUENCE, 3
unordered pieces
Length = 118726
Score = 426 bits (925), Expect = e-118
Identities = 175/209 (83%), Positives = 189/209 (90%)
Frame = -3 / +3
Query: 627 ACQVYXQQKAKNDPNAXXILELMKNYEALRVAYVDERQINGNEKEXXSVLVKYDQQLQRE 448
ACQ+Y QK K DP+A IL LMKN EALRVAYVDER + KE SVLVKYDQQL++E
Sbjct: 20175 ACQIYGTQKEKKDPHAEEILYLMKNNEALRVAYVDERTTGRDGKEYFSVLVKYDQQLEKE 20354
Query: 447 VEIYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEFNR 268
VE+YRVKLPG LK+GEGKPENQNHA+IFTRGDA+QTIDMNQDNYFEEALKMRNLLEE+ R
Sbjct: 20355 VEVYRVKLPGPLKLGEGKPENQNHAIIFTRGDALQTIDMNQDNYFEEALKMRNLLEEYRR 20534
Query: 267 YYGIRKPKILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYGHPDVFD 88
YYG+RKP ILGVREH+FTGSVSSLAWFMSAQETSFVTLGQRVLA+PLKVRMHYGHPDVFD
Sbjct: 20535 YYGVRKPTILGVREHIFTGSVSSLAWFMSAQETSFVTLGQRVLANPLKVRMHYGHPDVFD 20714
Query: 87 RLWFLGRGGISKASRIINISEDIFAGFNC 1
R WFL RGGISKASR+INISEDIFAGFNC
Sbjct: 20715 RFWFLTRGGISKASRVINISEDIFAGFNC 20801
Score = 198 bits (427), Expect = 7e-050
Identities = 94/207 (45%), Positives = 132/207 (63%)
Frame = +1 / -3
Query: 1 TVETSKNVLTNVDYS*CFTDTTSAQKPKTIKNIWVAIMHSDFKWISQNTLPQSDKTCLLG 180
T+E SK VL VD+S F DTTS+ +PK +K+IW+ IMHS+F+ I QN L D+TCLLG
Sbjct: 20801 TIEPSKYVLAYVDHSGSFADTTSS*EPKPVKHIWMTIMHSNFQRICQNPLS*GDETCLLG 20622
Query: 181 RHEPSKRRN*TREDVFPNPKNFRLANSIITIELF**VSHL*SFFKVVVLVHINSLNCIAP 360
HEP KR + E+VFP+ N ++++T LF +SHL F KVV+L+H+ SL +
Sbjct: 20621 *HEPGKRGHGASENVFPDT*NCWFPDTVVTSILFKEISHLECFLKVVILIHVYSLQSVPA 20442
Query: 361 CEDECMILIFWLSFANLQLSRQLNPIDFNLPLQLLVIFHENRXXLFFVAIDLPFINISNT 540
ED+ +ILI LS LQ +RQ + + FNL QLL+I +++R L V I+I N+
Sbjct: 20441 SEDDGVILILGLSLPELQWTRQFDSVYFNLLFQLLIILNKDREILLPVPSSSSLIHICNS 20262
Query: 541 *CFIIFH*LQYXXSIGVILSFLLXIYL 621
FI+FH*+Q S+G++L L I L
Sbjct: 20261 KSFIVFH*IQNFLSMGILLFLLSSINL 20181
Score = 143 bits (307), Expect = 2e-033
Identities = 81/202 (40%), Positives = 104/202 (51%)
Frame = -2 / +2
Query: 607 AES*E*PQCXXXIGANEKL*SITCCLC**KADQWQRKRVXLCSREI*PTIAAGG*NLSG* 428
+E E C +NEK *S + C+C *+ R+ V LC +* + GG*++
Sbjct: 20195 SEGKEGSPC*GNFVSNEKQ*SSSSCICG*ENYWKGREGVFLCPC*V*SAVGKGG*SIQSQ 20374
Query: 427 VAWRVEDWRRKARKSESCTHLHKGRCSSNY*YEPRQLL*RSSKDEKPTRRVQSLLWNSQA 248
A +E KAR+S+S HLH ++Y +E LL* S++DEK RV +LL +
Sbjct: 20375 TAGSIEARGGKARESKSRHHLHSRGRFADYRHESG*LL*GSTQDEKSP*RV*TLLRCPET 20554
Query: 247 *NSWGSGTRLHGFSFFSCLVHVCPGDKFCHXXXXXXXXXXXSQNALWPPRCF*SSLVFGP 68
N GT H SCLVHV PGDKF H S NALW RC * LV
Sbjct: 20555 NNFRCQGTHFHWLRVLSCLVHVSPGDKFRHPRTEGFGKSFESSNALWSSRCV*QVLVLNS 20734
Query: 67 RWYQ*SIKNNQH**GHFCWFQL 2
RWYQ S +++QH GH CW QL
Sbjct: 20735 RWYQQSFQSDQHKRGHICWVQL 20800
Score = 138 bits (295), Expect(3) = 1e-051
Identities = 60/78 (76%), Positives = 63/78 (80%)
Frame = +2 / -1
Query: 2 QLKPAKMSSLMLIILDALLIPPRPKNQRRSKTSGWP*CILTLSGSARTRCPRVTKLVSWA 181
QL PA MSSLMLI L+ALLIPPR KNQ S TSG P*CI T G A+T CPRVTKLVSWA
Sbjct: 20800 QLNPANMSSLMLITLEALLIPPRVKNQNLSNTSG*P*CIRTFKGFAKTLCPRVTKLVSWA 20621
Query: 182 DMNQAREETEPVKTCSRT 235
DMNQARE+TEPVK CS T
Sbjct: 20620 DMNQAREDTEPVKMCSLT 20567
Score = 62.0 bits (129), Expect(3) = 1e-051
Identities = 33/61 (54%), Positives = 36/61 (59%)
Frame = +2 / -1
Query: 422 GNLTR*ISTSRCNCWSYFTRTEXXSFSLPLICLSST*ATRNAS*FFISSNXXXALGSFLA 601
G+LT STS NC SY TRTE SF + LSST ATR AS FFI A GSF +
Sbjct: 20380 GSLTLYTSTSFSNC*SYLTRTEKYSFPSLPVVLSSTYATRRASLFFIRYKISSAWGSFFS 20201
Query: 602 F 604
F
Sbjct: 20200 F 20198
Score = 43.2 bits (88), Expect(3) = 1e-051
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +2 / -1
Query: 278 SSSRFLIFRASSK*LSWFISIV*TASPLVKM 370
SS RFLI ASSK*LS F+SIV ASP VKM
Sbjct: 20524 SSRRFLILSASSK*LS*FMSIVCKASPRVKM 20432
>gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKING DRAFT SEQUENCE
Length = 118519
Score = 426 bits (925), Expect = e-118
Identities = 175/209 (83%), Positives = 189/209 (90%)
Frame = -3 / -1
Query: 627 ACQVYXQQKAKNDPNAXXILELMKNYEALRVAYVDERQINGNEKEXXSVLVKYDQQLQRE 448
ACQ+Y QK K DP+A IL LMKN EALRVAYVDER + KE SVLVKYDQQL++E
Sbjct: 12622 ACQIYGTQKEKKDPHAEEILYLMKNNEALRVAYVDERTTGRDGKEYFSVLVKYDQQLEKE 12443
Query: 447 VEIYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEFNR 268
VE+YRVKLPG LK+GEGKPENQNHA+IFTRGDA+QTIDMNQDNYFEEALKMRNLLEE+ R
Sbjct: 12442 VEVYRVKLPGPLKLGEGKPENQNHAIIFTRGDALQTIDMNQDNYFEEALKMRNLLEEYRR 12263
Query: 267 YYGIRKPKILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYGHPDVFD 88
YYG+RKP ILGVREH+FTGSVSSLAWFMSAQETSFVTLGQRVLA+PLKVRMHYGHPDVFD
Sbjct: 12262 YYGVRKPTILGVREHIFTGSVSSLAWFMSAQETSFVTLGQRVLANPLKVRMHYGHPDVFD 12083
Query: 87 RLWFLGRGGISKASRIINISEDIFAGFNC 1
R WFL RGGISKASR+INISEDIFAGFNC
Sbjct: 12082 RFWFLTRGGISKASRVINISEDIFAGFNC 11996
Score = 198 bits (427), Expect = 7e-050
Identities = 94/207 (45%), Positives = 132/207 (63%)
Frame = +1 / +2
Query: 1 TVETSKNVLTNVDYS*CFTDTTSAQKPKTIKNIWVAIMHSDFKWISQNTLPQSDKTCLLG 180
T+E SK VL VD+S F DTTS+ +PK +K+IW+ IMHS+F+ I QN L D+TCLLG
Sbjct: 11996 TIEPSKYVLAYVDHSGSFADTTSS*EPKPVKHIWMTIMHSNFQRICQNPLS*GDETCLLG 12175
Query: 181 RHEPSKRRN*TREDVFPNPKNFRLANSIITIELF**VSHL*SFFKVVVLVHINSLNCIAP 360
HEP KR + E+VFP+ N ++++T LF +SHL F KVV+L+H+ SL +
Sbjct: 12176 *HEPGKRGHGASENVFPDT*NCWFPDTVVTSILFKEISHLECFLKVVILIHVYSLQSVPA 12355
Query: 361 CEDECMILIFWLSFANLQLSRQLNPIDFNLPLQLLVIFHENRXXLFFVAIDLPFINISNT 540
ED+ +ILI LS LQ +RQ + + FNL QLL+I +++R L V I+I N+
Sbjct: 12356 SEDDGVILILGLSLPELQWTRQFDSVYFNLLFQLLIILNKDREILLPVPSSSSLIHICNS 12535
Query: 541 *CFIIFH*LQYXXSIGVILSFLLXIYL 621
FI+FH*+Q S+G++L L I L
Sbjct: 12536 KSFIVFH*IQNFLSMGILLFLLSSINL 12616
Score = 143 bits (307), Expect = 2e-033
Identities = 81/202 (40%), Positives = 104/202 (51%)
Frame = -2 / -3
Query: 607 AES*E*PQCXXXIGANEKL*SITCCLC**KADQWQRKRVXLCSREI*PTIAAGG*NLSG* 428
+E E C +NEK *S + C+C *+ R+ V LC +* + GG*++
Sbjct: 12602 SEGKEGSPC*GNFVSNEKQ*SSSSCICG*ENYWKGREGVFLCPC*V*SAVGKGG*SIQSQ 12423
Query: 427 VAWRVEDWRRKARKSESCTHLHKGRCSSNY*YEPRQLL*RSSKDEKPTRRVQSLLWNSQA 248
A +E KAR+S+S HLH ++Y +E LL* S++DEK RV +LL +
Sbjct: 12422 TAGSIEARGGKARESKSRHHLHSRGRFADYRHESG*LL*GSTQDEKSP*RV*TLLRCPET 12243
Query: 247 *NSWGSGTRLHGFSFFSCLVHVCPGDKFCHXXXXXXXXXXXSQNALWPPRCF*SSLVFGP 68
N GT H SCLVHV PGDKF H S NALW RC * LV
Sbjct: 12242 NNFRCQGTHFHWLRVLSCLVHVSPGDKFRHPRTEGFGKSFESSNALWSSRCV*QVLVLNS 12063
Query: 67 RWYQ*SIKNNQH**GHFCWFQL 2
RWYQ S +++QH GH CW QL
Sbjct: 12062 RWYQQSFQSDQHKRGHICWVQL 11997
Score = 138 bits (295), Expect(3) = 1e-051
Identities = 60/78 (76%), Positives = 63/78 (80%)
Frame = +2 / +3
Query: 2 QLKPAKMSSLMLIILDALLIPPRPKNQRRSKTSGWP*CILTLSGSARTRCPRVTKLVSWA 181
QL PA MSSLMLI L+ALLIPPR KNQ S TSG P*CI T G A+T CPRVTKLVSWA
Sbjct: 11997 QLNPANMSSLMLITLEALLIPPRVKNQNLSNTSG*P*CIRTFKGFAKTLCPRVTKLVSWA 12176
Query: 182 DMNQAREETEPVKTCSRT 235
DMNQARE+TEPVK CS T
Sbjct: 12177 DMNQAREDTEPVKMCSLT 12230
Score = 62.0 bits (129), Expect(3) = 1e-051
Identities = 33/61 (54%), Positives = 36/61 (59%)
Frame = +2 / +3
Query: 422 GNLTR*ISTSRCNCWSYFTRTEXXSFSLPLICLSST*ATRNAS*FFISSNXXXALGSFLA 601
G+LT STS NC SY TRTE SF + LSST ATR AS FFI A GSF +
Sbjct: 12417 GSLTLYTSTSFSNC*SYLTRTEKYSFPSLPVVLSSTYATRRASLFFIRYKISSAWGSFFS 12596
Query: 602 F 604
F
Sbjct: 12597 F 12599
Score = 43.2 bits (88), Expect(3) = 1e-051
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 278 SSSRFLIFRASSK*LSWFISIV*TASPLVKM 370
SS RFLI ASSK*LS F+SIV ASP VKM
Sbjct: 12273 SSRRFLILSASSK*LS*FMSIVCKASPRVKM 12365
>emb|CR350839.1| mte1-86C17FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 765
Score = 212 bits (457), Expect(2) = 1e-063
Identities = 84/95 (88%), Positives = 90/95 (94%)
Frame = -3 / -2
Query: 285 LEEFNRYYGIRKPKILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYG 106
L+ + RYYG+RKP ILGVREH+FTGSVSSLAWFMSAQETSFVTLGQRVLA+PLKVRMHYG
Sbjct: 710 LKSYRRYYGVRKPTILGVREHIFTGSVSSLAWFMSAQETSFVTLGQRVLANPLKVRMHYG 531
Query: 105 HPDVFDRLWFLGRGGISKASRIINISEDIFAGFNC 1
HPDVFDR WFL RGGISKASR+INISEDIFAGFNC
Sbjct: 530 HPDVFDRFWFLTRGGISKASRVINISEDIFAGFNC 426
Score = 138 bits (295), Expect(2) = 2e-035
Identities = 60/78 (76%), Positives = 63/78 (80%)
Frame = +2 / +1
Query: 2 QLKPAKMSSLMLIILDALLIPPRPKNQRRSKTSGWP*CILTLSGSARTRCPRVTKLVSWA 181
QL PA MSSLMLI L+ALLIPPR KNQ S TSG P*CI T G A+T CPRVTKLVSWA
Sbjct: 427 QLNPANMSSLMLITLEALLIPPRVKNQNLSNTSG*P*CIRTFKGFAKTLCPRVTKLVSWA 606
Query: 182 DMNQAREETEPVKTCSRT 235
DMNQARE+TEPVK CS T
Sbjct: 607 DMNQAREDTEPVKMCSLT 660
Score = 104 bits (221), Expect(2) = 3e-024
Identities = 45/90 (50%), Positives = 62/90 (68%)
Frame = +1 / +3
Query: 1 TVETSKNVLTNVDYS*CFTDTTSAQKPKTIKNIWVAIMHSDFKWISQNTLPQSDKTCLLG 180
T+E SK VL VD+S F DTTS+ +PK +K+IW+ IMHS+F+ I QN L D+TCLLG
Sbjct: 426 TIEPSKYVLAYVDHSGSFADTTSS*EPKPVKHIWMTIMHSNFQRICQNPLS*GDETCLLG 605
Query: 181 RHEPSKRRN*TREDVFPNPKNFRLANSIIT 270
HEP KR + E+VFP+ N ++++T
Sbjct: 606 *HEPGKRGHGASENVFPDT*NCWFPDTVVT 695
Score = 52.4 bits (108), Expect(2) = 1e-063
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 339 IDMNQDNYFEEALKMRNLLEE 277
IDMNQDNYFEEALKMRNLLEE
Sbjct: 765 IDMNQDNYFEEALKMRNLLEE 703
Score = 32.2 bits (64), Expect(2) = 2e-035
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2 / +2
Query: 275 NSSSRFLIFRASSK*LSWFIS 337
NSS RFLI ASSK*LS F+S
Sbjct: 701 NSSRRFLILSASSK*LS*FMS 763
Score = 28.6 bits (56), Expect(2) = 3e-024
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 277 LF**VSHL*SFFKVVVLVHI 336
LF +SHL F KVV+L+H+
Sbjct: 703 LFKEISHLECFLKVVILIHV 762
>gb|CB893638.1|CB893638 EST646430 HOGA Medicago truncatula cDNA clone HOGA-28F5, mRNA
sequence
Length = 841
Score = 221 bits (478), Expect(3) = 2e-061
Identities = 87/107 (81%), Positives = 100/107 (93%)
Frame = -3 / +3
Query: 411 KIGEGKPENQNHALIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEFNRYYGIRKPKILGV 232
+IGEGKPENQNHA+IFTRG+A+QTIDMNQDNY+EEA KMRN+LEEF+ + G RKP ILG+
Sbjct: 519 EIGEGKPENQNHAIIFTRGEALQTIDMNQDNYYEEAFKMRNVLEEFHAHKGQRKPTILGL 698
Query: 231 REHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYGHPDVF 91
REH+FTGSVSSLAWFMS QETSFVT+GQRVLA+PLKVR HYGHPD+F
Sbjct: 699 REHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLKVRFHYGHPDIF 839
Score = 30.4 bits (60), Expect(3) = 2e-061
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3 / +3
Query: 573 ILELMKNYEALRVAYVDERQ 514
IL LM + ALRVAY+DE +
Sbjct: 357 ILNLMVTHSALRVAYIDETE 416
Score = 24.0 bits (46), Expect(3) = 2e-061
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 444 EIYRVKLPG 418
EIYR+KLPG
Sbjct: 483 EIYRIKLPG 509
>gb|AC158209.13| Medicago truncatula clone mth2-154h5, complete sequence
Length = 93864
Score = 90.4 bits (191), Expect(4) = 1e-057
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = -3 / -1
Query: 444 EIYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQDNYFEEAL 301
EI+R+KLPG K+GEGKPENQNHA+IFTRG+A+QTIDMNQ Y + +L
Sbjct: 58011 EIFRIKLPGPAKLGEGKPENQNHAIIFTRGEALQTIDMNQVKYIKRSL 57868
Score = 77.1 bits (162), Expect(4) = 1e-057
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -3 / -1
Query: 324 DNYFEEALKMRNLLEEFNRYYGIRKPKILGVREHVFTG 211
DNY EEALKMRNLLEEFN +G+R P ILGVREH+FTG
Sbjct: 57777 DNYLEEALKMRNLLEEFNEDHGVRPPTILGVREHIFTG 57664
Score = 76.7 bits (161), Expect(4) = 1e-057
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -3 / -2
Query: 126 KVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
+VR HYGHPDVFDR++ + RGGISKASR IN+SEDIFAG
Sbjct: 57098 RVRFHYGHPDVFDRIFHVTRGGISKASRGINLSEDIFAG 56982
Score = 60.6 bits (126), Expect(4) = 1e-057
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -3 / -3
Query: 210 SVSSLAWFMSAQETSFVTLGQRVLADPLK 124
SVSSLAWFMS QETSFVT+GQRVLA PLK
Sbjct: 57586 SVSSLAWFMSNQETSFVTIGQRVLARPLK 57500
>gb|AC137603.16| Medicago truncatula clone mth2-14b10, complete sequence
Length = 109793
Score = 85.8 bits (181), Expect(4) = 1e-056
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -3 / -2
Query: 444 EIYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQ 325
EIY VKLPG K+GEGKPENQNHA+IFTRG+AVQTIDMNQ
Sbjct: 6862 EIYSVKLPGNPKLGEGKPENQNHAIIFTRGNAVQTIDMNQ 6743
Score = 82.2 bits (173), Expect(4) = 6e-044
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = -3 / -2
Query: 441 IYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQDNYFEEALKM 295
IY++KLPG +GEGKPENQNHA++FTRG+ +QTIDMNQ YF E K+
Sbjct: 63547 IYKIKLPGPAILGEGKPENQNHAIMFTRGEGLQTIDMNQV*YFYEKHKI 63401
Score = 81.7 bits (172), Expect(4) = 1e-056
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = -3 / -2
Query: 135 DPLKVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
D +VRMHYGHPDVFDR++ + RGGISKASR+INISEDI++G
Sbjct: 5521 DLFRVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSG 5396
Score = 79.4 bits (167), Expect(4) = 6e-044
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = -3 / -1
Query: 126 KVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
+VR HYGHPDVFDR++ L RGG+SKAS++IN+SEDIFAG
Sbjct: 62549 RVRFHYGHPDVFDRIFHLTRGGVSKASKVINLSEDIFAG 62433
Score = 77.1 bits (162), Expect(4) = 1e-056
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = -3 / -2
Query: 324 DNYFEEALKMRNLLEEFNRYYGIRKPKILGVREHVFTG 211
DNYFEEALKMRNLLEEF+ +G+R P ILGVREHVFTG
Sbjct: 5884 DNYFEEALKMRNLLEEFHSDHGLRPPTILGVREHVFTG 5771
Score = 59.3 bits (123), Expect(4) = 6e-044
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = -3 / -2
Query: 210 SVSSLAWFMSAQETSFVTLGQRVLADPLK 124
SVSSLAWFMS QETSFVT+GQR+LA+PL+
Sbjct: 63124 SVSSLAWFMSNQETSFVTIGQRLLANPLR 63038
Score = 57.4 bits (119), Expect(4) = 1e-056
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -3 / -3
Query: 231 REHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLK 124
R + SVSSLA FMS QETSFVTLGQRVLA+PLK
Sbjct: 5703 RVFMLLSSVSSLASFMSNQETSFVTLGQRVLANPLK 5596
Score = 38.2 bits (77), Expect(4) = 6e-044
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -3 / -3
Query: 288 LLEEFNRYYGIRKPKILGVREHVFTG 211
L E ++ G+R P ILG+REH+FTG
Sbjct: 63315 LQEFLKKHDGVRYPSILGLREHIFTG 63238
>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
Length = 113632
Score = 85.8 bits (181), Expect(4) = 1e-056
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -3 / +1
Query: 444 EIYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQ 325
EIY VKLPG K+GEGKPENQNHA+IFTRG+AVQTIDMNQ
Sbjct: 3418 EIYSVKLPGNPKLGEGKPENQNHAIIFTRGNAVQTIDMNQ 3537
Score = 81.7 bits (172), Expect(4) = 1e-056
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = -3 / +1
Query: 135 DPLKVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
D +VRMHYGHPDVFDR++ + RGGISKASR+INISEDI++G
Sbjct: 4759 DLFRVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSG 4884
Score = 77.1 bits (162), Expect(4) = 1e-056
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = -3 / +1
Query: 324 DNYFEEALKMRNLLEEFNRYYGIRKPKILGVREHVFTG 211
DNYFEEALKMRNLLEEF+ +G+R P ILGVREHVFTG
Sbjct: 4396 DNYFEEALKMRNLLEEFHSDHGLRPPTILGVREHVFTG 4509
Score = 57.4 bits (119), Expect(4) = 1e-056
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -3 / +2
Query: 231 REHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLK 124
R + SVSSLA FMS QETSFVTLGQRVLA+PLK
Sbjct: 4577 RVFMLLSSVSSLASFMSNQETSFVTLGQRVLANPLK 4684
>gb|AC157648.18| Medicago truncatula clone mth2-68d9, complete sequence
Length = 84361
Score = 76.7 bits (161), Expect(4) = 6e-050
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = -3 / +2
Query: 126 KVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
+VR HYGHPD+FDR++ + RGGISKAS+ IN+SEDIFAG
Sbjct: 75515 RVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAG 75631
Score = 73.0 bits (153), Expect(4) = 6e-050
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -3 / +2
Query: 324 DNYFEEALKMRNLLEEFNRYYGIRKPKILGVREHVFTGSVSSLAWFM 184
DNY+EEA KMRN+LEEF+ + G RKP ILG+REH+FTG + L + +
Sbjct: 75038 DNYYEEAFKMRNVLEEFHAHKGQRKPTILGLREHIFTGRFALLQYLV 75178
Score = 66.6 bits (139), Expect(4) = 6e-050
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = -3 / +2
Query: 411 KIGEGKPENQNHALIFTRGDAVQTIDMNQ 325
+IGEGKPENQNHA+IFTRG+A+QTIDMNQ
Sbjct: 74864 EIGEGKPENQNHAIIFTRGEALQTIDMNQ 74950
Score = 62.0 bits (129), Expect(4) = 6e-050
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3 / +1
Query: 210 SVSSLAWFMSAQETSFVTLGQRVLADPLK 124
SVSSLAWFMS QETSFVT+GQRVLA+PLK
Sbjct: 75286 SVSSLAWFMSNQETSFVTIGQRVLANPLK 75372
>gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 116277
Score = 76.7 bits (161), Expect(4) = 2e-049
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = -3 / -1
Query: 126 KVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
+VR HYGHPD+FDR++ + RGGISKAS+ IN+SEDIFAG
Sbjct: 98319 RVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAG 98203
Score = 73.0 bits (153), Expect(4) = 2e-049
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -3 / -1
Query: 324 DNYFEEALKMRNLLEEFNRYYGIRKPKILGVREHVFTGSVSSLAWFM 184
DNY+EEA KMRN+LEEF+ + G RKP ILG+REH+FTG + L + +
Sbjct: 98796 DNYYEEAFKMRNVLEEFHAHKGQRKPTILGLREHIFTGRFALLQYLV 98656
Score = 66.6 bits (139), Expect(4) = 2e-049
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = -3 / -1
Query: 411 KIGEGKPENQNHALIFTRGDAVQTIDMNQ 325
+IGEGKPENQNHA+IFTRG+A+QTIDMNQ
Sbjct: 98970 EIGEGKPENQNHAIIFTRGEALQTIDMNQ 98884
Score = 62.0 bits (129), Expect(4) = 2e-049
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3 / -3
Query: 210 SVSSLAWFMSAQETSFVTLGQRVLADPLK 124
SVSSLAWFMS QETSFVT+GQRVLA+PLK
Sbjct: 98548 SVSSLAWFMSNQETSFVTIGQRVLANPLK 98462
>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete
sequence
Length = 103090
Score = 80.3 bits (169), Expect(5) = 1e-047
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = -3 / +3
Query: 126 KVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
+VR HYGHPDVFDRL+ L RGG+SKAS++IN+SEDIFAG
Sbjct: 7344 RVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAG 7460
Score = 78.5 bits (165), Expect(5) = 1e-047
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = -3 / +2
Query: 441 IYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQ 325
IY++KLPG +GEGKPENQNHA+IFTRG+ +QTIDMNQ
Sbjct: 6644 IYKIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQ 6760
Score = 59.3 bits (123), Expect(5) = 1e-047
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = -3 / +3
Query: 210 SVSSLAWFMSAQETSFVTLGQRVLADPLK 124
SVSSLAWFMS QETSFVT+GQR+LA+PL+
Sbjct: 7038 SVSSLAWFMSNQETSFVTIGQRLLANPLR 7124
Score = 39.1 bits (79), Expect(5) = 1e-047
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 324 DNYFEEALKMRNLLEEF 274
DNY EEALKMRNLL+EF
Sbjct: 6844 DNYMEEALKMRNLLQEF 6894
Score = 38.2 bits (77), Expect(5) = 1e-047
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -3 / +1
Query: 288 LLEEFNRYYGIRKPKILGVREHVFTGSVSSLAWFM 184
L E ++ G+R P ILG+REH+FTG + +F+
Sbjct: 6883 LQEFLKKHDGVRFPSILGLREHIFTGR*IHINFFL 6987
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence
Length = 105353
Score = 80.3 bits (169), Expect(5) = 1e-047
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = -3 / +3
Query: 126 KVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
+VR HYGHPDVFDRL+ L RGG+SKAS++IN+SEDIFAG
Sbjct: 78741 RVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAG 78857
Score = 78.5 bits (165), Expect(5) = 1e-047
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = -3 / +2
Query: 441 IYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQ 325
IY++KLPG +GEGKPENQNHA+IFTRG+ +QTIDMNQ
Sbjct: 78041 IYKIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQ 78157
Score = 59.3 bits (123), Expect(5) = 1e-047
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = -3 / +3
Query: 210 SVSSLAWFMSAQETSFVTLGQRVLADPLK 124
SVSSLAWFMS QETSFVT+GQR+LA+PL+
Sbjct: 78435 SVSSLAWFMSNQETSFVTIGQRLLANPLR 78521
Score = 39.1 bits (79), Expect(5) = 1e-047
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 324 DNYFEEALKMRNLLEEF 274
DNY EEALKMRNLL+EF
Sbjct: 78241 DNYMEEALKMRNLLQEF 78291
Score = 38.2 bits (77), Expect(5) = 1e-047
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -3 / +1
Query: 288 LLEEFNRYYGIRKPKILGVREHVFTGSVSSLAWFM 184
L E ++ G+R P ILG+REH+FTG + +F+
Sbjct: 78280 LQEFLKKHDGVRFPSILGLREHIFTGR*IHINFFL 78384
>gb|AJ500423.1|AJ500423 AJ500423 MTGIM Medicago truncatula cDNA clone mtgmacc120016c03,
mRNA sequence
Length = 581
Score = 174 bits (374), Expect(2) = 2e-047
Identities = 70/95 (73%), Positives = 83/95 (87%)
Frame = -3 / -2
Query: 288 LLEEFNRYYGIRKPKILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHY 109
L E ++ G R P ILG+REH+FTGSVSSLAWFMS QETSFVT+GQR+LA+PLKVR HY
Sbjct: 325 LQEFLKKHGGPRYPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHY 146
Query: 108 GHPDVFDRLWFLGRGGISKASRIINISEDIFAGFN 4
GHPDVFDRL+ L RGG+SKAS+++N+SEDIFAGFN
Sbjct: 145 GHPDVFDRLFHLTRGGVSKASKVVNLSEDIFAGFN 41
Score = 116 bits (248), Expect(2) = 6e-030
Identities = 45/61 (73%), Positives = 53/61 (86%)
Frame = -3 / -2
Query: 441 IYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEFNRYY 262
IYR+KLPG +GEGKPENQNHA+IFTRG+ +QTIDMNQDNY EEA KMRNLL+EF + +
Sbjct: 481 IYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAFKMRNLLQEFLKKH 302
Query: 261 G 259
G
Sbjct: 301 G 299
Score = 91.8 bits (194), Expect(2) = 3e-028
Identities = 43/76 (56%), Positives = 50/76 (65%)
Frame = +2 / +3
Query: 2 QLKPAKMSSLMLIILDALLIPPRPKNQRRSKTSGWP*CILTLSGSARTRCPRVTKLVSWA 181
+LKPA +SSL L L+ALL PP + + S TSGWP* LT G A CP VTKLVS
Sbjct: 39 ELKPANISSLKLTTLEALLTPPLVRWKSLSNTSGWP*WNLTFKGLANNLCPIVTKLVS*L 218
Query: 182 DMNQAREETEPVKTCS 229
D+N A +ET PVK CS
Sbjct: 219 DINHASDETLPVKICS 266
Score = 54.7 bits (113), Expect(2) = 3e-028
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1 / +2
Query: 289 VSHL*SFFKVVVLVHINSLNCIAPCEDECMILIFWL 396
+ H SFF +V+L+HIN L A CE++ M+LIFWL
Sbjct: 329 IPHFESFFHIVILIHINCLQAFASCENDGMVLIFWL 436
Score = 36.3 bits (73), Expect(2) = 2e-047
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -2 / -1
Query: 397 KARKSESCTHLHKGRCSSNY*YEPRQLL*RSSKDEKPTRRV 275
+ARKS+ C H HK R +N *YE L RS ++E+ R+
Sbjct: 437 EARKSKPCHHFHKRRRLANN*YESG*LYGRSFQNEEFAARI 315
Score = 35.4 bits (71), Expect(2) = 6e-030
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = -1 / -3
Query: 206 FLLLLGSCLPRRQVLSLWGSVFWLIHLKSECIMATQMFLIVFGFWAEVVSVKHQE*STLV 27
F L G C R+ VL +WL + IMATQM+LI F E V + ST
Sbjct: 243 FHRLHGLCPIRKPVL*QLDRDYWLTP*R*GSIMATQMYLIGFST*QEAV*ARLLRSST*A 64
Query: 26 RTFLLVS 6
R +L VS
Sbjct: 63 RIYLQVS 43
>emb|CR351348.1| mte1-86D18FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 654
Score = 188 bits (405), Expect = 7e-047
Identities = 76/81 (93%), Positives = 79/81 (97%)
Frame = -3 / -2
Query: 243 ILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYGHPDVFDRLWFLGRG 64
ILGVREH+FTGSVSSLAWFMSAQETSFVTLGQRVLA+PLKVRMHYGHPDVFDR WFL RG
Sbjct: 653 ILGVREHIFTGSVSSLAWFMSAQETSFVTLGQRVLANPLKVRMHYGHPDVFDRFWFLTRG 474
Query: 63 GISKASRIINISEDIFAGFNC 1
GISKASR+INISEDIFAGFNC
Sbjct: 473 GISKASRVINISEDIFAGFNC 411
Score = 138 bits (295), Expect = 1e-031
Identities = 60/78 (76%), Positives = 63/78 (80%)
Frame = +2 / +1
Query: 2 QLKPAKMSSLMLIILDALLIPPRPKNQRRSKTSGWP*CILTLSGSARTRCPRVTKLVSWA 181
QL PA MSSLMLI L+ALLIPPR KNQ S TSG P*CI T G A+T CPRVTKLVSWA
Sbjct: 412 QLNPANMSSLMLITLEALLIPPRVKNQNLSNTSG*P*CIRTFKGFAKTLCPRVTKLVSWA 591
Query: 182 DMNQAREETEPVKTCSRT 235
DMNQARE+TEPVK CS T
Sbjct: 592 DMNQAREDTEPVKMCSLT 645
>gb|CB893388.1|CB893388 EST646180 HOGA Medicago truncatula cDNA clone HOGA-27P9, mRNA
sequence
Length = 512
Score = 154 bits (330), Expect(3) = 2e-041
Identities = 61/79 (77%), Positives = 71/79 (89%)
Frame = -3 / +1
Query: 411 KIGEGKPENQNHALIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEFNRYYGIRKPKILGV 232
+IGEGKPENQNHA+IFTRG+A+Q IDMNQ NY+EEA KMRN+LEEF+ + G RKP ILG+
Sbjct: 274 EIGEGKPENQNHAIIFTRGEALQNIDMNQGNYYEEAFKMRNVLEEFHAHKGQRKPTILGL 453
Query: 231 REHVFTGSVSSLAWFMSAQ 175
REH+FTGSVSSLAWFMS Q
Sbjct: 454 REHIFTGSVSSLAWFMSNQ 510
Score = 30.4 bits (60), Expect(3) = 2e-041
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3 / +1
Query: 573 ILELMKNYEALRVAYVDERQ 514
IL LM + ALRVAY+DE +
Sbjct: 112 ILNLMVTHSALRVAYIDETE 171
Score = 24.0 bits (46), Expect(3) = 2e-041
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +1
Query: 444 EIYRVKLPG 418
EIYR+KLPG
Sbjct: 238 EIYRIKLPG 264
>emb|CR496523.1| mth2-172K11FM2 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 498
Score = 84.9 bits (179), Expect(3) = 7e-037
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = -3 / -2
Query: 444 EIYRVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQDN 319
EIYR+KLP K+GEGKPENQNHA+IFTRG+A+QTIDMNQ N
Sbjct: 470 EIYRIKLPVPAKLGEGKPENQNHAIIFTRGEALQTIDMNQVN 345
Score = 78.5 bits (165), Expect(3) = 7e-037
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -3 / -3
Query: 324 DNYFEEALKMRNLLEEFNRYYGIRKPKILGVREHVFTG 211
DNY EEALKMRNLLEEFN +G+R+P ILGVREH+FTG
Sbjct: 241 DNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTG 128
Score = 29.9 bits (59), Expect(3) = 7e-037
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / -3
Query: 207 VSSLAWFMSAQET 169
VSSLAWFMS QET
Sbjct: 43 VSSLAWFMSNQET 5
>emb|CR318117.1| mte1-43G7RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 618
Score = 76.7 bits (161), Expect(3) = 5e-032
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = -3 / +3
Query: 126 KVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
+VR HYGHPD+FDR++ + RGGISKAS+ IN+SEDIFAG
Sbjct: 432 RVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAG 548
Score = 62.0 bits (129), Expect(3) = 5e-032
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3 / +2
Query: 210 SVSSLAWFMSAQETSFVTLGQRVLADPLK 124
SVSSLAWFMS QETSFVT+GQRVLA+PLK
Sbjct: 203 SVSSLAWFMSNQETSFVTIGQRVLANPLK 289
Score = 40.0 bits (81), Expect(3) = 5e-032
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -3 / +3
Query: 276 FNRYYGIRKPKILGVREHVFTGSVSSLAWFM 184
F+ + G RKP ILG+REH+FTG + L + +
Sbjct: 3 FHAHKGQRKPTILGLREHIFTGRFALLQYLV 95
>emb|CR322977.1| mte1-5H7RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 636
Score = 76.7 bits (161), Expect(3) = 6e-032
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = -3 / +3
Query: 126 KVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAG 10
+VR HYGHPD+FDR++ + RGGISKAS+ IN+SEDIFAG
Sbjct: 432 RVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAG 548
Score = 62.0 bits (129), Expect(3) = 6e-032
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3 / +2
Query: 210 SVSSLAWFMSAQETSFVTLGQRVLADPLK 124
SVSSLAWFMS QETSFVT+GQRVLA+PLK
Sbjct: 203 SVSSLAWFMSNQETSFVTIGQRVLANPLK 289
Score = 40.0 bits (81), Expect(3) = 6e-032
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -3 / +3
Query: 276 FNRYYGIRKPKILGVREHVFTGSVSSLAWFM 184
F+ + G RKP ILG+REH+FTG + L + +
Sbjct: 3 FHAHKGQRKPTILGLREHIFTGRFALLQYLV 95
>gb|DW015121.1|DW015121 EST1224082 MTY Medicago truncatula cDNA clone MTYA123, mRNA
sequence
Length = 634
Score = 136 bits (292), Expect = 3e-031
Identities = 57/68 (83%), Positives = 64/68 (94%)
Frame = -3 / +3
Query: 207 VSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYGHPDVFDRLWFLGRGGISKASRIINIS 28
VSSLA FMS QETSFVTLGQRVLA+PLKVRMHYGHPDVFDR++ + RGGISKASR+INIS
Sbjct: 9 VSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRVFHITRGGISKASRVINIS 188
Query: 27 EDIFAGFN 4
EDI++GFN
Sbjct: 189 EDIYSGFN 212
>gb|AW696467.2|AW696467 NF106E12ST1F1098 Developing stem Medicago truncatula cDNA clone
NF106E12ST 5', mRNA sequence
Length = 511
Score = 111 bits (237), Expect(3) = 1e-029
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = -3 / +1
Query: 435 RVKLPGELKIGEGKPENQNHALIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEFNRYYG 259
R+KLPG +GEGKPENQNHA+IFTRG+ +QTIDMNQDNY EEA KMRNLL+EF + +G
Sbjct: 178 RIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAFKMRNLLQEFLKKHG 354
Score = 92.7 bits (196), Expect(2) = 4e-023
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = -3 / +1
Query: 288 LLEEFNRYYGIRKPKILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLK 124
L E ++ G R P ILG+REH+FTGSVSSLAWFMS QETSFVT+GQR+LA+PLK
Sbjct: 328 LQEFLKKHGGPRYPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLK 492
Score = 36.3 bits (73), Expect(2) = 4e-023
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -2 / +3
Query: 397 KARKSESCTHLHKGRCSSNY*YEPRQLL*RSSKDEKPTRRV 275
+ARKS+ C H HK R +N *YE L RS ++E+ R+
Sbjct: 216 EARKSKPCHHFHKRRRLANN*YESG*LYGRSFQNEEFAARI 338
Score = 31.3 bits (62), Expect(3) = 1e-029
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3 / +3
Query: 573 ILELMKNYEALRVAYVDE 520
IL+LM Y +LRVAY+DE
Sbjct: 3 ILKLMTKYPSLRVAYIDE 56
Score = 25.8 bits (50), Expect(3) = 1e-029
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -2 / +3
Query: 262 WNSQA*NSWGSGTRLHGFSFFSCLVHVCPGDKFC 161
W + +W + F +C+V+V G++FC
Sbjct: 354 WPQISNYTWTQRAYFYWQCFIACMVYVQSGNQFC 455
>gb|BF636038.1|BF636038 NF069A09DT1F1068 Drought Medicago truncatula cDNA clone NF069A09DT
5', mRNA sequence
Length = 668
Score = 105 bits (225), Expect = 5e-022
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = -3 / +2
Query: 159 TLGQRVLADPLKVRMHYGHPDVFDRLWFLGRGGISKASRIINISEDIFAGFN 4
T+GQR+LA+PL+VR HYGHPDVFDRL+ L RGG+SKAS++IN+SEDIFAGFN
Sbjct: 2 TIGQRLLANPLRVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFN 157
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 610,727,083
Number of Sequences: 392609
Number of extensions: 8185441
Number of successful extensions: 39499
Number of sequences better than 1.0e-020: 24
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19662777420
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)