TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCA17a05.yg.2.1
         (548 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BG451837.1|BG451837  NF101B02DT1F1013 Drought Medicago tr...   111   1e-034
gb|CX525575.1|CX525575  s13dNF24F07AT063_479784 Aphid-Infect...   111   1e-034
gb|AC144478.20|  Medicago truncatula clone mth2-20b20, compl...   111   3e-030

>gb|BG451837.1|BG451837 NF101B02DT1F1013 Drought Medicago truncatula cDNA clone NF101B02DT
           5', mRNA sequence
          Length = 663

 Score =  111 bits (236), Expect(2) = 1e-034
 Identities = 37/48 (77%), Positives = 44/48 (91%)
 Frame = -3 / -3

                                                           
Query: 423 VQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
           VQY H+W+FCQ+GC+D YFTAHYQSPRQM+CLW+KLS GRA CCN+R*
Sbjct: 256 VQYSHNWKFCQYGCMDGYFTAHYQSPRQMVCLWDKLSRGRARCCNFR* 113




 Score = 56.5 bits (117), Expect(2) = 1e-034
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -3 / -3

                                                
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYN 436
           VIS  I   + S+H +  LRLFKMEDVSMGMWVE +N
Sbjct: 382 VISKDIVNFIISQHKDRKLRLFKMEDVSMGMWVERFN 272



>gb|CX525575.1|CX525575 s13dNF24F07AT063_479784 Aphid-Infected Shoots Medicago truncatula
           cDNA, mRNA sequence
          Length = 550

 Score =  111 bits (236), Expect(2) = 1e-034
 Identities = 37/48 (77%), Positives = 44/48 (91%)
 Frame = -3 / -3

                                                           
Query: 423 VQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
           VQY H+W+FCQ+GC+D YFTAHYQSPRQM+CLW+KLS GRA CCN+R*
Sbjct: 392 VQYSHNWKFCQYGCMDGYFTAHYQSPRQMVCLWDKLSRGRARCCNFR* 249




 Score = 56.5 bits (117), Expect(2) = 1e-034
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -3 / -3

                                                
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYN 436
           VIS  I   + S+H +  LRLFKMEDVSMGMWVE +N
Sbjct: 518 VISKDIVNFIISQHKDRKLRLFKMEDVSMGMWVERFN 408



>gb|AC144478.20| Medicago truncatula clone mth2-20b20, complete sequence
          Length = 144248

 Score =  111 bits (236), Expect(2) = 3e-030
 Identities = 37/48 (77%), Positives = 44/48 (91%)
 Frame = -3 / -2

                                                            
Query: 423  VQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
            VQY H+W+FCQ+GC+D YFTAHYQSPRQM+CLW+KLS GRA CCN+R*
Sbjct: 6610 VQYSHNWKFCQYGCMDGYFTAHYQSPRQMVCLWDKLSRGRARCCNFR* 6467




 Score = 41.8 bits (85), Expect(2) = 3e-030
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -3 / -2

                                
Query: 495  SLRLFKMEDVSMGMWVEDYN 436
            S +LFKMEDVSMGMWVE +N
Sbjct: 6685 SWQLFKMEDVSMGMWVERFN 6626



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 534,203,548
Number of Sequences: 392609
Number of extensions: 7208824
Number of successful extensions: 46908
Number of sequences better than 1.0e-020: 3
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 16310250966
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)