TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.060L08F020610.3.1
(677 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI308280.1|BI308280 EST529690 GPOD Medicago truncatula c... 171 7e-061
gb|BQ148260.1|BQ148260 NF065D12FL1F1102 Developing flower M... 171 6e-055
gb|CB891685.1|CB891685 EST648654 KV3 Medicago truncatula cD... 163 1e-054
gb|BF646871.1|BF646871 NF068B09EC1F1076 Elicited cell cultu... 171 3e-054
gb|AJ498016.1|AJ498016 AJ498016 MTPOSE Medicago truncatula ... 171 1e-048
gb|AW689696.1|AW689696 NF023D01ST1F1000 Developing stem Med... 166 3e-047
gb|AW695082.1|AW695082 NF091D12ST1F1101 Developing stem Med... 171 4e-046
gb|BG450081.1|BG450081 NF011E06DT1F1051 Drought Medicago tr... 166 3e-044
gb|CX535243.1|CX535243 s13dNF37C05MJ038_388663 Methyl Jasmo... 171 2e-043
gb|CX535093.1|CX535093 s13dNF36H09MJ080_388365 Methyl Jasmo... 109 6e-043
gb|AW685281.1|AW685281 NF027B07NR1F1000 Nodulated root Medi... 138 5e-042
gb|AW693828.2|AW693828 NF069E04ST1F1034 Developing stem Med... 158 1e-041
gb|CX542040.1|CX542040 s13dNF89D01GS014_467388 Germinating ... 103 4e-041
gb|CF068981.1|CF068981 EST669702 MTUS Medicago truncatula c... 168 7e-041
gb|CB892038.1|CB892038 EST649007 KV3 Medicago truncatula cD... 95 1e-038
gb|AC141107.5| Medicago truncatula clone mth2-34a12, comple... 95 6e-036
gb|CX523840.1|CX523840 s13dNF05F06AT059_440078 Aphid-Infect... 146 4e-034
gb|BF647863.1|BF647863 NF038B02EC1F1016 Elicited cell cultu... 101 6e-033
>gb|BI308280.1|BI308280 EST529690 GPOD Medicago truncatula cDNA clone pGPOD-2L19 5' end,
mRNA sequence
Length = 808
Score = 171 bits (369), Expect(3) = 7e-061
Identities = 70/89 (78%), Positives = 77/89 (86%)
Frame = +1 / +2
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 287 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 466
Query: 319 GDESSIIVGTDRTSCFERNPVALRMEVLC 405
G+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 467 GNATYINVETDRTSCFERNKVALRLEVLC 553
Score = 127 bits (272), Expect(2) = 9e-033
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = -1 / -2
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS RSAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA
Sbjct: 546 TSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 367
Query: 218 WLISSKKMPNILSGIFLAFCGEAST 144
LISSK +P +SGI L EAST
Sbjct: 366 *LISSKNIPKRVSGIRLPDA*EAST 292
Score = 63.8 bits (133), Expect(3) = 7e-061
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1 / +2
Query: 427 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHVR 519
CP+ GVGVYNPG+WGMNIE+GK YKV + R
Sbjct: 563 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYAR 655
Score = 38.6 bits (78), Expect(3) = 7e-061
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3 / +2
Query: 567 GYKKLAAHTITGSKKTFAKWTKVEFHLRSNQNNSNS 674
G LA+ ITGS F+ WTKVE L + N NS
Sbjct: 701 GVGSLASTVITGSASDFSNWTKVETVLEAKATNPNS 808
Score = 34.1 bits (68), Expect(2) = 9e-033
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3 / -1
Query: 516 NMQAHLINLPLFNVHAPVARIIDPNTSRWTG 424
+++ + + LPL N+HAP R+I+ NT G
Sbjct: 652 SIEDNFVFLPLLNIHAPETRVINANTISGAG 560
>gb|BQ148260.1|BQ148260 NF065D12FL1F1102 Developing flower Medicago truncatula cDNA clone
NF065D12FL 5', mRNA sequence
Length = 664
Score = 171 bits (369), Expect(2) = 6e-055
Identities = 70/89 (78%), Positives = 77/89 (86%)
Frame = +1 / +2
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 266 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 445
Query: 319 GDESSIIVGTDRTSCFERNPVALRMEVLC 405
G+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 446 GNATYINVETDRTSCFERNKVALRLEVLC 532
Score = 127 bits (272), Expect(2) = 9e-033
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = -1 / -2
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS RSAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA
Sbjct: 525 TSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 346
Query: 218 WLISSKKMPNILSGIFLAFCGEAST 144
LISSK +P +SGI L EAST
Sbjct: 345 *LISSKNIPKRVSGIRLPDA*EAST 271
Score = 63.8 bits (133), Expect(2) = 6e-055
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1 / +2
Query: 427 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHVR 519
CP+ GVGVYNPG+WGMNIE+GK YKV + R
Sbjct: 542 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYAR 634
Score = 34.1 bits (68), Expect(2) = 9e-033
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3 / -1
Query: 516 NMQAHLINLPLFNVHAPVARIIDPNTSRWTG 424
+++ + + LPL N+HAP R+I+ NT G
Sbjct: 631 SIEDNFVFLPLLNIHAPETRVINANTISGAG 539
>gb|CB891685.1|CB891685 EST648654 KV3 Medicago truncatula cDNA clone KV3-51D17, mRNA
sequence
Length = 469
Score = 163 bits (351), Expect(3) = 1e-054
Identities = 65/81 (80%), Positives = 72/81 (88%)
Frame = +1 / -2
Query: 163 NARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLIIGDESSIIV 342
+ R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW IIG+ + I V
Sbjct: 462 SGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSIIGNATYINV 283
Query: 343 GTDRTSCFERNPVALRMEVLC 405
TDRTSCFERN VALR+EVLC
Sbjct: 282 ETDRTSCFERNKVALRLEVLC 220
Score = 122 bits (262), Expect(2) = 2e-031
Identities = 56/77 (72%), Positives = 63/77 (81%)
Frame = -1 / +2
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS RSAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA
Sbjct: 227 TSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 406
Query: 218 WLISSKKMPNILSGIFL 168
LISSK +P +SGI L
Sbjct: 407 *LISSKNIPKRVSGIRL 457
Score = 63.8 bits (133), Expect(3) = 1e-054
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1 / -2
Query: 427 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHVR 519
CP+ GVGVYNPG+WGMNIE+GK YKV + R
Sbjct: 210 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYAR 118
Score = 34.1 bits (68), Expect(2) = 2e-031
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3 / +1
Query: 516 NMQAHLINLPLFNVHAPVARIIDPNTSRWTG 424
+++ + + LPL N+HAP R+I+ NT G
Sbjct: 121 SIEDNFVFLPLLNIHAPETRVINANTISGAG 213
Score = 25.8 bits (50), Expect(3) = 1e-054
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3 / -2
Query: 567 GYKKLAAHTITGSKKTFAKWTKVE 638
G LA+ ITGS F+ TKVE
Sbjct: 72 GVGSLASTVITGSASDFSNRTKVE 1
>gb|BF646871.1|BF646871 NF068B09EC1F1076 Elicited cell culture Medicago truncatula cDNA
clone NF068B09EC 5', mRNA sequence
Length = 652
Score = 171 bits (369), Expect(2) = 3e-054
Identities = 70/89 (78%), Positives = 77/89 (86%)
Frame = +1 / +3
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 258 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 437
Query: 319 GDESSIIVGTDRTSCFERNPVALRMEVLC 405
G+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 438 GNATYINVETDRTSCFERNKVALRLEVLC 524
Score = 127 bits (272), Expect(2) = 2e-032
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = -1 / -1
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS RSAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA
Sbjct: 517 TSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 338
Query: 218 WLISSKKMPNILSGIFLAFCGEAST 144
LISSK +P +SGI L EAST
Sbjct: 337 *LISSKNIPKRVSGIRLPDA*EAST 263
Score = 61.6 bits (128), Expect(2) = 3e-054
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1 / +3
Query: 427 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHVR 519
CP+ GVGVYNPG+WGMNIE+GK YK + R
Sbjct: 534 CPTDGVGVYNPGFWGMNIEQGKKYKXVFYAR 626
Score = 33.1 bits (66), Expect(2) = 2e-032
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3 / -3
Query: 516 NMQAHLINLPLFNVHAPVARIIDPNTSRWTG 424
+++ + LPL N+HAP R+I+ NT G
Sbjct: 623 SIEDXFVFLPLLNIHAPEXRVINANTISGAG 531
>gb|AJ498016.1|AJ498016 AJ498016 MTPOSE Medicago truncatula cDNA clone mt--acc955200a10,
mRNA sequence
Length = 565
Score = 171 bits (369), Expect(2) = 1e-048
Identities = 70/89 (78%), Positives = 77/89 (86%)
Frame = +1 / +1
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 139 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 318
Query: 319 GDESSIIVGTDRTSCFERNPVALRMEVLC 405
G+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 319 GNATYINVETDRTSCFERNKVALRLEVLC 405
Score = 127 bits (272), Expect = 2e-028
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = -1 / -3
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS RSAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA
Sbjct: 398 TSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 219
Query: 218 WLISSKKMPNILSGIFLAFCGEAST 144
LISSK +P +SGI L EAST
Sbjct: 218 *LISSKNIPKRVSGIRLPDA*EAST 144
Score = 42.8 bits (87), Expect(2) = 1e-048
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1 / +1
Query: 427 CPSGGVGVYNPGYWGM 474
CP+ GVGVYNPG+WGM
Sbjct: 415 CPTDGVGVYNPGFWGM 462
>gb|AW689696.1|AW689696 NF023D01ST1F1000 Developing stem Medicago truncatula cDNA clone
NF023D01ST 5', mRNA sequence
Length = 634
Score = 166 bits (357), Expect(2) = 3e-047
Identities = 68/89 (76%), Positives = 75/89 (84%)
Frame = +1 / +1
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSN GFEAGGPN PSNIDPW II
Sbjct: 265 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNXGFEAGGPNIPSNIDPWSII 444
Query: 319 GDESSIIVGTDRTSCFERNPVALRMEVLC 405
G+ + I V TDRTSCFERN VAL +EVLC
Sbjct: 445 GNATYINVETDRTSCFERNKVALXLEVLC 531
Score = 122 bits (261), Expect = 6e-027
Identities = 58/85 (68%), Positives = 65/85 (76%)
Frame = -1 / -3
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS SAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNP LLTSSAHNPPAPA
Sbjct: 524 TSNXSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPXLLTSSAHNPPAPA 345
Query: 218 WLISSKKMPNILSGIFLAFCGEAST 144
LISSK +P +SGI L EAST
Sbjct: 344 *LISSKNIPKRVSGIRLPDA*EAST 270
Score = 43.7 bits (89), Expect(2) = 3e-047
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 418 TNACPSGGVGVYNPGYWGMNI 480
T P+ GVGVYNPG+WGMNI
Sbjct: 533 TVPAPTDGVGVYNPGFWGMNI 595
>gb|AW695082.1|AW695082 NF091D12ST1F1101 Developing stem Medicago truncatula cDNA clone
NF091D12ST 5', mRNA sequence
Length = 628
Score = 171 bits (369), Expect(2) = 4e-046
Identities = 70/89 (78%), Positives = 77/89 (86%)
Frame = +1 / +2
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 314 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 493
Query: 319 GDESSIIVGTDRTSCFERNPVALRMEVLC 405
G+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 494 GNATYINVETDRTSCFERNKVALRLEVLC 580
Score = 127 bits (272), Expect = 2e-028
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = -1 / -2
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS RSAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA
Sbjct: 573 TSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 394
Query: 218 WLISSKKMPNILSGIFLAFCGEAST 144
LISSK +P +SGI L EAST
Sbjct: 393 *LISSKNIPKRVSGIRLPDA*EAST 319
Score = 34.5 bits (69), Expect(2) = 4e-046
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 427 CPSGGVGVYNPGY 465
CP+ GVGVYNPGY
Sbjct: 590 CPTDGVGVYNPGY 628
>gb|BG450081.1|BG450081 NF011E06DT1F1051 Drought Medicago truncatula cDNA clone NF011E06DT
5', mRNA sequence
Length = 621
Score = 166 bits (356), Expect(2) = 3e-044
Identities = 68/87 (78%), Positives = 75/87 (86%)
Frame = +1 / +3
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 285 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 464
Query: 319 GDESSIIVGTDRTSCFERNPVALRMEV 399
G+ + I V TDRTSCFERN VALR+EV
Sbjct: 465 GNATYINVETDRTSCFERNKVALRLEV 545
Score = 127 bits (272), Expect = 2e-028
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = -1 / -3
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS RSAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA
Sbjct: 544 TSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 365
Query: 218 WLISSKKMPNILSGIFLAFCGEAST 144
LISSK +P +SGI L EAST
Sbjct: 364 *LISSKNIPKRVSGIRLPDA*EAST 290
Score = 34.1 bits (68), Expect(2) = 3e-044
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 427 CPSGGVGVYNPGYW 468
CP+ GVGV NPG+W
Sbjct: 560 CPTDGVGVXNPGFW 601
>gb|CX535243.1|CX535243 s13dNF37C05MJ038_388663 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 437
Score = 171 bits (369), Expect(2) = 2e-043
Identities = 70/89 (78%), Positives = 77/89 (86%)
Frame = +1 / +3
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 132 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 311
Query: 319 GDESSIIVGTDRTSCFERNPVALRMEVLC 405
G+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 312 GNATYINVETDRTSCFERNKVALRLEVLC 398
Score = 127 bits (272), Expect = 2e-028
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = -1 / -2
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS RSAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA
Sbjct: 391 TSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 212
Query: 218 WLISSKKMPNILSGIFLAFCGEAST 144
LISSK +P +SGI L EAST
Sbjct: 211 *LISSKNIPKRVSGIRLPDA*EAST 137
Score = 25.4 bits (49), Expect(2) = 2e-043
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 427 CPSGGVGVYN 456
CP+ GVGVYN
Sbjct: 408 CPTDGVGVYN 437
>gb|CX535093.1|CX535093 s13dNF36H09MJ080_388365 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 505
Score = 109 bits (232), Expect(3) = 6e-043
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = +1 / +3
Query: 241 AELVSNRGFEAGGPNTPSNIDPWLIIGDESSIIVGTDRTSCFERNPVALRMEVLC 405
AELVSNRGFEAGGPN PSNIDPW IIG+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 9 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLC 173
Score = 63.8 bits (133), Expect(3) = 6e-043
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1 / +3
Query: 427 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHVR 519
CP+ GVGVYNPG+WGMNIE+GK YKV + R
Sbjct: 183 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYAR 275
Score = 40.9 bits (83), Expect(3) = 6e-043
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3 / +3
Query: 567 GYKKLAAHTITGSKKTFAKWTKVEFHLRSNQNNSNSR 677
G LA+ ITGS F+ WTKVE L + N NSR
Sbjct: 321 GVGSLASTVITGSASDFSNWTKVETVLEAKATNPNSR 431
>gb|AW685281.1|AW685281 NF027B07NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF027B07NR 5', mRNA sequence
Length = 651
Score = 138 bits (297), Expect(2) = 5e-042
Identities = 56/94 (59%), Positives = 71/94 (75%)
Frame = +1 / +2
Query: 124 NPSGHLSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNID 303
N S S+ + R +P+ +FGIF+EEINHAG+GG+WA+LV+N GFEA G TPSNI
Sbjct: 104 NGSQISSLVVNAAQGRPMPNTLFGIFYEEINHAGSGGIWAQLVNNSGFEAAGTRTPSNIF 283
Query: 304 PWLIIGDESSIIVGTDRTSCFERNPVALRMEVLC 405
PW IIG ESS+ + T+ +SCFERN VALRM+VLC
Sbjct: 284 PWTIIGTESSVKLQTELSSCFERNKVALRMDVLC 385
Score = 53.8 bits (111), Expect(2) = 5e-042
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 427 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHVR 519
CP GVGV NPG+WGMNI +GK YKV R
Sbjct: 392 CPPDGVGVSNPGFWGMNIVQGKKYKVVFFYR 484
>gb|AW693828.2|AW693828 NF069E04ST1F1034 Developing stem Medicago truncatula cDNA clone
NF069E04ST 5', mRNA sequence
Length = 604
Score = 158 bits (340), Expect(2) = 1e-041
Identities = 65/83 (78%), Positives = 71/83 (85%)
Frame = +1 / +2
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 287 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 466
Query: 319 GDESSIIVGTDRTSCFERNPVAL 387
G+ + I V TDRTSCFERN VAL
Sbjct: 467 GNATYINVETDRTSCFERNKVAL 535
Score = 123 bits (263), Expect = 3e-027
Identities = 58/83 (69%), Positives = 65/83 (78%)
Frame = -1 / -2
Query: 392 IRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPAWL 213
I SAT LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA L
Sbjct: 540 IGSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA*L 361
Query: 212 ISSKKMPNILSGIFLAFCGEAST 144
ISSK +P +SGI L EAST
Sbjct: 360 ISSKNIPKRVSGIRLPDA*EAST 292
Score = 32.7 bits (65), Expect(2) = 1e-041
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 427 CPSGGVGVYNPGY 465
CP+ GVGVYNPG+
Sbjct: 564 CPTDGVGVYNPGF 602
>gb|CX542040.1|CX542040 s13dNF89D01GS014_467388 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 522
Score = 103 bits (219), Expect(3) = 4e-041
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +1 / +2
Query: 250 VSNRGFEAGGPNTPSNIDPWLIIGDESSIIVGTDRTSCFERNPVALRMEVLC 405
VSNRGFEAGGPN PSNIDPW IIG+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 2 VSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLC 157
Score = 63.8 bits (133), Expect(3) = 4e-041
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1 / +2
Query: 427 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHVR 519
CP+ GVGVYNPG+WGMNIE+GK YKV + R
Sbjct: 167 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYAR 259
Score = 40.9 bits (83), Expect(3) = 4e-041
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3 / +2
Query: 567 GYKKLAAHTITGSKKTFAKWTKVEFHLRSNQNNSNSR 677
G LA+ ITGS F+ WTKVE L + N NSR
Sbjct: 305 GVGSLASTVITGSASDFSNWTKVETVLEAKATNPNSR 415
>gb|CF068981.1|CF068981 EST669702 MTUS Medicago truncatula cDNA clone MTUS-14H2, mRNA
sequence
Length = 530
Score = 168 bits (362), Expect = 7e-041
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = +1 / +1
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 229 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 408
Query: 319 GDESSIIVGTDRTSCFERNPVALRMEVLC 405
G+ + I V TDRTSCFERN ALR+EVLC
Sbjct: 409 GNATYINVETDRTSCFERNKGALRLEVLC 495
Score = 124 bits (266), Expect = 1e-027
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = -1 / -1
Query: 398 TSIRSATGLRSKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPA 219
TS RSA LRSK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA
Sbjct: 488 TSNRSAPLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 309
Query: 218 WLISSKKMPNILSGIFLAFCGEAST 144
LISSK +P +SGI L EAST
Sbjct: 308 *LISSKNIPKRVSGIRLPDA*EAST 234
>gb|CB892038.1|CB892038 EST649007 KV3 Medicago truncatula cDNA clone KV3-53A7, mRNA
sequence
Length = 569
Score = 94.5 bits (200), Expect(3) = 1e-038
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +1 / +1
Query: 262 GFEAGGPNTPSNIDPWLIIGDESSIIVGTDRTSCFERNPVALRMEVLC 405
GFEAGGPN PSNIDPW IIG+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 1 GFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLC 144
Score = 63.8 bits (133), Expect(3) = 1e-038
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1 / +1
Query: 427 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHVR 519
CP+ GVGVYNPG+WGMNIE+GK YKV + R
Sbjct: 154 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYAR 246
Score = 40.9 bits (83), Expect(3) = 1e-038
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3 / +1
Query: 567 GYKKLAAHTITGSKKTFAKWTKVEFHLRSNQNNSNSR 677
G LA+ ITGS F+ WTKVE L + N NSR
Sbjct: 292 GVGSLASTVITGSASDFSNWTKVETVLEAKATNPNSR 402
>gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete sequence
Length = 142659
Score = 94.5 bits (200), Expect(5) = 6e-036
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +1 / +2
Query: 262 GFEAGGPNTPSNIDPWLIIGDESSIIVGTDRTSCFERNPVALRMEVLC 405
GFEAGGPN PSNIDPW IIG+ + I V TDRTSCFERN VALR+EVLC
Sbjct: 54917 GFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLC 55060
Score = 81.7 bits (172), Expect(4) = 6e-030
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +1 / +3
Query: 262 GFEAGGPNTPSNIDPWLIIGDESSIIVGTDRTSCFERNPVALRMEVLC 405
GFEA G TPSNI PW IIG ESS+ + T+ +SCFERN VALRM+VLC
Sbjct: 88821 GFEAAGTRTPSNIFPWTIIGTESSVKLQTELSSCFERNKVALRMDVLC 88964
Score = 79.0 bits (166), Expect(3) = 2e-023
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +1 / +3
Query: 262 GFEAGGPNTPSNIDPWLIIGDESSIIVGTDRTSCFERNPVALRMEVLC 405
GFEAGG PSN PW I+G E++I V T+ +SCFERN VALRM+VLC
Sbjct: 72546 GFEAGGKKMPSNFAPWTIVGTETTIHVETELSSCFERNKVALRMDVLC 72689
Score = 51.5 bits (106), Expect(5) = 6e-036
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 181 DKMFGIFFEEINHAGAGGLWAELVSNRG 264
D+ +EINHAGAGGLWAELVSNRG
Sbjct: 54714 DEFLEFDLQEINHAGAGGLWAELVSNRG 54797
Score = 47.8 bits (98), Expect(3) = 2e-023
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +1 / +2
Query: 205 EEINHAGAGGLWAELVSNRG 264
+EINHAGAGGLW+ELV+NRG
Sbjct: 72107 QEINHAGAGGLWSELVNNRG 72166
Score = 42.8 bits (87), Expect(4) = 6e-030
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 205 EEINHAGAGGLWAELVSNRG 264
+EINHAG+GG+WA+LV+N G
Sbjct: 88683 QEINHAGSGGIWAQLVNNSG 88742
Score = 42.8 bits (87), Expect(5) = 6e-036
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 427 CPSGGVGVYNPGYWGM 474
CP+ GVGVYNPG+WGM
Sbjct: 55070 CPTDGVGVYNPGFWGM 55117
Score = 38.6 bits (78), Expect(3) = 2e-023
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 427 CPSGGVGVYNPGYWGM 474
CP GVG+ NPGYWGM
Sbjct: 72696 CPFDGVGISNPGYWGM 72743
Score = 37.7 bits (76), Expect(4) = 6e-030
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 427 CPSGGVGVYNPGYWGM 474
CP GVGV NPG+WGM
Sbjct: 88971 CPPDGVGVSNPGFWGM 89018
Score = 36.3 bits (73), Expect(5) = 6e-036
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +3
Query: 139 LSVDASPQNARKIPDKMFGIFFE 207
L VDAS + R+IP+ +FGIFFE
Sbjct: 54351 LVVDASQASGRRIPETLFGIFFE 54419
Score = 32.2 bits (64), Expect(5) = 6e-036
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3 / +2
Query: 600 GSKKTFAKWTKVEFHLRSNQNNSNSR 677
GS F+ WTKVE L + N NSR
Sbjct: 55562 GSASDFSNWTKVETVLEAKATNPNSR 55639
Score = 24.9 bits (48), Expect(4) = 6e-030
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1 / +1
Query: 124 NPSGHLSVDASPQNARKIPDKMFGIFFEEINH 219
N S S+ + R +P+ +FGIF+E N+
Sbjct: 88483 NGSQISSLVVNAAQGRPMPNTLFGIFYEVGNY 88578
>gb|CX523840.1|CX523840 s13dNF05F06AT059_440078 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 547
Score = 146 bits (313), Expect = 4e-034
Identities = 59/76 (77%), Positives = 65/76 (85%)
Frame = +1 / +3
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 318
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN PSNIDPW II
Sbjct: 318 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSII 497
Query: 319 GDESSIIVGTDRTSCF 366
G+ + I V TDRTSCF
Sbjct: 498 GNATYINVETDRTSCF 545
Score = 114 bits (243), Expect = 2e-024
Identities = 52/75 (69%), Positives = 59/75 (78%)
Frame = -1 / -1
Query: 368 SKHDVRSVPTMILDSSPMISHGSIFEGVLGPPASNPLLLTSSAHNPPAPAWLISSKKMPN 189
SK DVRSV T+I + P+I GSIF+G+LGPPASNPLLLTSSAHNPPAPA LISSK +P
Sbjct: 547 SKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA*LISSKNIPK 368
Query: 188 ILSGIFLAFCGEAST 144
+SGI L EAST
Sbjct: 367 RVSGIRLPDA*EAST 323
>gb|BF647863.1|BF647863 NF038B02EC1F1016 Elicited cell culture Medicago truncatula cDNA
clone NF038B02EC 5', mRNA sequence
Length = 614
Score = 101 bits (215), Expect(4) = 6e-033
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = +1 / +3
Query: 139 LSVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPN 285
L VDAS + R+IP+ +FGIFFEEINHAGAGGLWAELVSNRGFEAGGPN
Sbjct: 291 LVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPN 437
Score = 33.6 bits (67), Expect(4) = 6e-033
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / +1
Query: 418 TNACPSGGVGVYNPGYW 468
T P GVGVYNPG+W
Sbjct: 562 TVPAPXDGVGVYNPGFW 612
Score = 31.8 bits (63), Expect(4) = 6e-033
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 346 TDRTSCFERNPVAL 387
TDRT CFERN VAL
Sbjct: 500 TDRTXCFERNKVAL 541
Score = 30.9 bits (61), Expect(4) = 6e-033
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 289 PSNIDPWLIIGDESSIIV 342
PSNIDPW IIG+ + I V
Sbjct: 442 PSNIDPWSIIGNATYINV 495
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 699,829,438
Number of Sequences: 392609
Number of extensions: 9728951
Number of successful extensions: 51941
Number of sequences better than 1.0e-020: 24
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 21553429095
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)