TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ7h03.xg.2.1
(487 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DW018234.1|DW018234 EST1227195 MTY Medicago truncatula c... 107 4e-036
gb|DW015855.1|DW015855 EST1224816 MTY Medicago truncatula c... 107 4e-036
gb|AW559238.1|AW559238 EST306074 DSIR Medicago truncatula c... 107 4e-036
gb|BE248356.1|BE248356 NF003F12DT1F1095 Drought Medicago tr... 107 4e-036
gb|CX526647.1|CX526647 s13dNF25B06AT057_513806 Aphid-Infect... 107 4e-036
gb|CX541456.1|CX541456 s13dNF44A04GS033_466214 Germinating ... 107 1e-033
gb|BF632531.1|BF632531 NF027A09DT1F1066 Drought Medicago tr... 107 4e-032
gb|AW559538.1|AW559538 EST314586 DSIR Medicago truncatula c... 91 6e-028
gb|AJ498553.1|AJ498553 AJ498553 MTPOSE Medicago truncatula ... 91 9e-028
gb|BQ148732.1|BQ148732 NF080H09FL1F1080 Developing flower M... 91 9e-028
gb|BF638624.1|BF638624 NF062F05PL1F1045 Phosphate starved l... 91 4e-027
gb|CB893561.1|CB893561 EST646353 HOGA Medicago truncatula c... 84 1e-025
gb|BE203860.1|BE203860 EST396536 KV0 Medicago truncatula cD... 84 1e-025
gb|AW692114.2|AW692114 NF047H01ST1F1000 Developing stem Med... 91 7e-023
gb|BF519596.1|BF519596 EST457060 DSIL Medicago truncatula c... 107 9e-023
gb|BQ124953.1|BQ124953 EST610529 GLSD Medicago truncatula c... 51 1e-022
gb|AW126403.2|AW126403 N100511e rootphos(-) Medicago trunca... 91 2e-022
gb|AC123899.15| Medicago truncatula clone mth2-33n6, comple... 58 7e-022
gb|BI271595.1|BI271595 NF092A02FL1F1008 Developing flower M... 101 6e-021
>gb|DW018234.1|DW018234 EST1227195 MTY Medicago truncatula cDNA clone MTYB403, mRNA
sequence
Length = 836
Score = 107 bits (229), Expect(2) = 4e-036
Identities = 42/74 (56%), Positives = 46/74 (62%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SF GTQ C C+K +D L +YHK CF HCKG L SYSSM LYCK H
Sbjct: 239 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 418
Query: 251 FEQLFKETGSFSKN 292
FEQLFKE G+FSKN
Sbjct: 419 FEQLFKEHGNFSKN 460
Score = 64.3 bits (134), Expect(2) = 4e-036
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 509 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 658
>gb|DW015855.1|DW015855 EST1224816 MTY Medicago truncatula cDNA clone MTYAA49, mRNA
sequence
Length = 741
Score = 107 bits (229), Expect(2) = 4e-036
Identities = 42/74 (56%), Positives = 46/74 (62%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SF GTQ C C+K +D L +YHK CF HCKG L SYSSM LYCK H
Sbjct: 227 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 406
Query: 251 FEQLFKETGSFSKN 292
FEQLFKE G+FSKN
Sbjct: 407 FEQLFKEHGNFSKN 448
Score = 64.3 bits (134), Expect(2) = 4e-036
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 497 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 646
>gb|AW559238.1|AW559238 EST306074 DSIR Medicago truncatula cDNA clone pDSIR-7F8, mRNA
sequence
Length = 672
Score = 107 bits (229), Expect(2) = 4e-036
Identities = 42/74 (56%), Positives = 46/74 (62%)
Frame = +2 / +3
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SF GTQ C C+K +D L +YHK CF HCKG L SYSSM LYCK H
Sbjct: 114 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 293
Query: 251 FEQLFKETGSFSKN 292
FEQLFKE G+FSKN
Sbjct: 294 FEQLFKEHGNFSKN 335
Score = 64.3 bits (134), Expect(2) = 4e-036
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 384 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 533
>gb|BE248356.1|BE248356 NF003F12DT1F1095 Drought Medicago truncatula cDNA clone NF003F12DT
5', mRNA sequence
Length = 642
Score = 107 bits (229), Expect(2) = 4e-036
Identities = 42/74 (56%), Positives = 46/74 (62%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SF GTQ C C+K +D L +YHK CF HCKG L SYSSM LYCK H
Sbjct: 131 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 310
Query: 251 FEQLFKETGSFSKN 292
FEQLFKE G+FSKN
Sbjct: 311 FEQLFKEHGNFSKN 352
Score = 64.3 bits (134), Expect(2) = 4e-036
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 401 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 550
>gb|CX526647.1|CX526647 s13dNF25B06AT057_513806 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 618
Score = 107 bits (229), Expect(2) = 4e-036
Identities = 42/74 (56%), Positives = 46/74 (62%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SF GTQ C C+K +D L +YHK CF HCKG L SYSSM LYCK H
Sbjct: 155 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 334
Query: 251 FEQLFKETGSFSKN 292
FEQLFKE G+FSKN
Sbjct: 335 FEQLFKEHGNFSKN 376
Score = 64.3 bits (134), Expect(2) = 4e-036
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 425 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 574
>gb|CX541456.1|CX541456 s13dNF44A04GS033_466214 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 549
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 42/74 (56%), Positives = 46/74 (62%)
Frame = +2 / +3
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SF GTQ C C+K +D L +YHK CF HCKG L SYSSM LYCK H
Sbjct: 147 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 326
Query: 251 FEQLFKETGSFSKN 292
FEQLFKE G+FSKN
Sbjct: 327 FEQLFKEHGNFSKN 368
Score = 56.1 bits (116), Expect(2) = 1e-033
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHK 451
LTR PSK + FSGT C KT YPLE +T+E +YHK
Sbjct: 417 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHK 539
>gb|BF632531.1|BF632531 NF027A09DT1F1066 Drought Medicago truncatula cDNA clone NF027A09DT
5', mRNA sequence
Length = 562
Score = 107 bits (229), Expect(2) = 4e-032
Identities = 42/74 (56%), Positives = 46/74 (62%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SF GTQ C C+K +D L +YHK CF HCKG L SYSSM LYCK H
Sbjct: 131 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 310
Query: 251 FEQLFKETGSFSKN 292
FEQLFKE G+FSKN
Sbjct: 311 FEQLFKEHGNFSKN 352
Score = 51.0 bits (105), Expect(2) = 4e-032
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +2 / +3
Query: 344 SKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
+KL + FSGT C KT YPLE +T+E +YHK SH G
Sbjct: 417 AKLRACFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHRG 551
>gb|AW559538.1|AW559538 EST314586 DSIR Medicago truncatula cDNA clone pDSIR-19N4, mRNA
sequence
Length = 782
Score = 90.9 bits (192), Expect(2) = 6e-028
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
+F GT C C+K +D L +HK CF HCKG L +Y+S LYC+ H
Sbjct: 52 AFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 231
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 232 FDQLFKRTGSLEKSF 276
Score = 53.8 bits (111), Expect(2) = 6e-028
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +2 / +1
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K SS F GT CQKTVYP E +T+ YHK HGG
Sbjct: 331 AAAKASSMFGGTRDKFSGCQKTVYPTEKVTVNGTPYHKSCFKCCHGG 471
>gb|AJ498553.1|AJ498553 AJ498553 MTPOSE Medicago truncatula cDNA clone mt--acc955206a09,
mRNA sequence
Length = 755
Score = 90.9 bits (192), Expect(2) = 9e-028
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
+F GT C C+K +D L +HK CF HCKG L +Y+S LYC+ H
Sbjct: 116 AFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 295
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 296 FDQLFKRTGSLEKSF 340
Score = 53.3 bits (110), Expect(2) = 9e-028
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +2 / +2
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K SS F GT CQKTVYP E +T+ YHK HGG
Sbjct: 395 AAAKASSMFGGTRDKCSGCQKTVYPTEKVTVNGTPYHKSCFKCCHGG 535
>gb|BQ148732.1|BQ148732 NF080H09FL1F1080 Developing flower Medicago truncatula cDNA clone
NF080H09FL 5', mRNA sequence
Length = 645
Score = 90.9 bits (192), Expect(2) = 9e-028
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
+F GT C C+K +D L +HK CF HCKG L +Y+S LYC+ H
Sbjct: 37 AFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 216
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 217 FDQLFKRTGSLEKSF 261
Score = 53.3 bits (110), Expect(2) = 9e-028
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +2 / +1
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K SS F GT CQKTVYP E +T+ YHK HGG
Sbjct: 316 AAAKASSMFGGTRDKCSGCQKTVYPTEKVTVNGTPYHKSCFKCCHGG 456
>gb|BF638624.1|BF638624 NF062F05PL1F1045 Phosphate starved leaf Medicago truncatula cDNA
clone NF062F05PL 5', mRNA sequence
Length = 657
Score = 91.3 bits (193), Expect(2) = 4e-027
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
+F GT C C+K +D L +HK CF HCKG L +Y+S LYC+ H
Sbjct: 169 AFAGTTQKCXACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 348
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 349 FDQLFKRTGSLEKSF 393
Score = 50.6 bits (104), Expect(2) = 4e-027
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = +2 / +1
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
A +K SS F GT CQKTVYP E +T+ YHK HG
Sbjct: 448 AAAKASSMFGGTRDKCXGCQKTVYPTEKVTVNGTPYHKSCFKCXHG 585
>gb|CB893561.1|CB893561 EST646353 HOGA Medicago truncatula cDNA clone HOGA-28E14, mRNA
sequence
Length = 781
Score = 84.0 bits (177), Expect(2) = 1e-025
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +2 / +1
Query: 95 CAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTHFEQLFKET 274
C C+K +D L +HK CF HCKG L +Y+S LYC+ HF+QLFK T
Sbjct: 4 CMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQLFKRT 183
Query: 275 GSFSKNF 295
GS K+F
Sbjct: 184 GSLEKSF 204
Score = 53.3 bits (110), Expect(2) = 1e-025
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +2 / +1
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K SS F GT CQKTVYP E +T+ YHK HGG
Sbjct: 259 AAAKASSMFGGTRDKCSGCQKTVYPTEKVTVNGTPYHKSCFKCCHGG 399
>gb|BE203860.1|BE203860 EST396536 KV0 Medicago truncatula cDNA clone pKV0-13C7, mRNA
sequence
Length = 698
Score = 84.0 bits (177), Expect(2) = 1e-025
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +2 / +3
Query: 95 CAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTHFEQLFKET 274
C C+K +D L +HK CF HCKG L +Y+S LYC+ HF+QLFK T
Sbjct: 9 CMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQLFKRT 188
Query: 275 GSFSKNF 295
GS K+F
Sbjct: 189 GSLEKSF 209
Score = 53.3 bits (110), Expect(2) = 1e-025
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +2 / +3
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K SS F GT CQKTVYP E +T+ YHK HGG
Sbjct: 264 AAAKASSMFGGTRDKCSGCQKTVYPTEKVTVNGTPYHKSCFKCCHGG 404
>gb|AW692114.2|AW692114 NF047H01ST1F1000 Developing stem Medicago truncatula cDNA clone
NF047H01ST 5', mRNA sequence
Length = 468
Score = 90.9 bits (192), Expect(2) = 7e-023
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
+F GT C C+K +D L +HK CF HCKG L +Y+S LYC+ H
Sbjct: 77 AFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 256
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 257 FDQLFKRTGSLEKSF 301
Score = 36.3 bits (73), Expect(2) = 7e-023
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLE 418
A +K SS F GT CQKTVYP E
Sbjct: 356 AAAKASSMFGGTRDKCSGCQKTVYPTE 436
>gb|BF519596.1|BF519596 EST457060 DSIL Medicago truncatula cDNA clone pDSIL-21M19, mRNA
sequence
Length = 450
Score = 107 bits (229), Expect = 9e-023
Identities = 42/74 (56%), Positives = 46/74 (62%)
Frame = +2 / +3
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SF GTQ C C+K +D L +YHK CF HCKG L SYSSM LYCK H
Sbjct: 180 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 359
Query: 251 FEQLFKETGSFSKN 292
FEQLFKE G+FSKN
Sbjct: 360 FEQLFKEHGNFSKN 401
>gb|BQ124953.1|BQ124953 EST610529 GLSD Medicago truncatula cDNA clone pGLSD-37P15, mRNA
sequence
Length = 775
Score = 50.6 bits (104), Expect(3) = 1e-022
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2 / +3
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGIL 199
M+SF GT C C+K ++ L +HK+CF HCKG L
Sbjct: 99 MASFAGTAQKCNTCEKKVYWVEQLTADNKVFHKSCFRCHHCKGTL 233
Score = 49.2 bits (101), Expect(3) = 1e-022
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2 / +2
Query: 335 RAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
+A +K+S F+GT C+KTVYP+E + ++ SYHK +HG
Sbjct: 593 QAYNKVSRFFAGTQEKCVGCKKTVYPIEKVAVDGESYHKNCFRCTHG 733
Score = 46.0 bits (94), Expect(3) = 1e-022
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 194 ILSXXSYSSMXXXLYCKTHFEQLFKETGSFSKNF 295
++ +Y S LYCK HF+QLFK TGS K+F
Sbjct: 443 LVQLSNYCSFESVLYCKPHFDQLFKMTGSLYKSF 544
>gb|AW126403.2|AW126403 N100511e rootphos(-) Medicago truncatula cDNA clone MHRP-6G10, mRNA
sequence
Length = 463
Score = 90.9 bits (192), Expect(2) = 2e-022
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
+F GT C C+K +D L +HK CF HCKG L +Y+S LYC+ H
Sbjct: 106 AFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 285
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 286 FDQLFKRTGSLEKSF 330
Score = 34.5 bits (69), Expect(2) = 2e-022
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 338 APSKLSSXFSGTXXXXXACQKTVYP 412
A +K SS F GT CQKTVYP
Sbjct: 385 AAAKASSMFGGTRDKCSGCQKTVYP 459
>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence
Length = 127126
Score = 58.3 bits (121), Expect(3) = 7e-022
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2 / +1
Query: 209 SYSSMXXXLYCKTHFEQLFKETGSFSKNF 295
+YSSM LYCK HFEQLFKE+G+FSKNF
Sbjct: 82087 TYSSMDGVLYCKPHFEQLFKESGNFSKNF 82173
Score = 55.6 bits (115), Expect(3) = 7e-022
Identities = 21/44 (47%), Positives = 24/44 (54%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILS 202
SFTGT C CDK +DLL YHK+C HCKG L+
Sbjct: 81595 SFTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLT 81726
Score = 44.1 bits (90), Expect(3) = 7e-022
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +2 / +1
Query: 335 RAPSKLSSXFSGTXXXXXACQKTVYPLE 418
R PS+LSS FSGT C KTVYPLE
Sbjct: 82558 RTPSRLSSMFSGTLDKCAVCTKTVYPLE 82641
>gb|BI271595.1|BI271595 NF092A02FL1F1008 Developing flower Medicago truncatula cDNA clone
NF092A02FL 5', mRNA sequence
Length = 349
Score = 101 bits (216), Expect = 6e-021
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGT C CDK +DLL YHK+C HCKG L+ +YSSM LYCK H
Sbjct: 92 SFTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLTMSTYSSMDGVLYCKPH 271
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKE+G F + + DK
Sbjct: 272 FEQLFKESGKFQQELSSKVF*EDK 343
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 267,486,802
Number of Sequences: 392609
Number of extensions: 1807920
Number of successful extensions: 13302
Number of sequences better than 1.0e-020: 21
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 13655093832
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)