TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ4h04.xg.2.2
(494 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DW018234.1|DW018234 EST1227195 MTY Medicago truncatula c... 107 5e-035
gb|DW015855.1|DW015855 EST1224816 MTY Medicago truncatula c... 107 5e-035
gb|AW559238.1|AW559238 EST306074 DSIR Medicago truncatula c... 107 5e-035
gb|BE248356.1|BE248356 NF003F12DT1F1095 Drought Medicago tr... 107 5e-035
gb|CX526647.1|CX526647 s13dNF25B06AT057_513806 Aphid-Infect... 107 5e-035
gb|CX541456.1|CX541456 s13dNF44A04GS033_466214 Germinating ... 107 6e-033
gb|BF632531.1|BF632531 NF027A09DT1F1066 Drought Medicago tr... 107 2e-032
gb|AW559538.1|AW559538 EST314586 DSIR Medicago truncatula c... 100 1e-030
gb|AJ498553.1|AJ498553 AJ498553 MTPOSE Medicago truncatula ... 100 2e-030
gb|BF638624.1|BF638624 NF062F05PL1F1045 Phosphate starved l... 100 2e-030
gb|BQ148732.1|BQ148732 NF080H09FL1F1080 Developing flower M... 100 2e-030
gb|CB893561.1|CB893561 EST646353 HOGA Medicago truncatula c... 92 4e-028
gb|BE203860.1|BE203860 EST396536 KV0 Medicago truncatula cD... 92 4e-028
gb|AC123899.15| Medicago truncatula clone mth2-33n6, comple... 70 3e-027
gb|AW126403.2|AW126403 N100511e rootphos(-) Medicago trunca... 100 3e-026
gb|AW692114.2|AW692114 NF047H01ST1F1000 Developing stem Med... 100 3e-026
gb|BI271595.1|BI271595 NF092A02FL1F1008 Developing flower M... 115 6e-025
gb|BF519596.1|BF519596 EST457060 DSIL Medicago truncatula c... 107 1e-022
gb|BQ124953.1|BQ124953 EST610529 GLSD Medicago truncatula c... 52 1e-021
>gb|DW018234.1|DW018234 EST1227195 MTY Medicago truncatula cDNA clone MTYB403, mRNA
sequence
Length = 836
Score = 107 bits (229), Expect(2) = 5e-035
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSF G Q KC C+KT + +D L+ YHK C HCKG + SYSSM+ LYCK
Sbjct: 236 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 415
Query: 251 HFEQLFKXTGSFSKN 295
HFEQLFK G+FSKN
Sbjct: 416 HFEQLFKEHGNFSKN 460
Score = 60.6 bits (126), Expect(2) = 5e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PSK + FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 509 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 649
>gb|DW015855.1|DW015855 EST1224816 MTY Medicago truncatula cDNA clone MTYAA49, mRNA
sequence
Length = 741
Score = 107 bits (229), Expect(2) = 5e-035
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSF G Q KC C+KT + +D L+ YHK C HCKG + SYSSM+ LYCK
Sbjct: 224 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 403
Query: 251 HFEQLFKXTGSFSKN 295
HFEQLFK G+FSKN
Sbjct: 404 HFEQLFKEHGNFSKN 448
Score = 60.6 bits (126), Expect(2) = 5e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PSK + FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 497 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 637
>gb|AW559238.1|AW559238 EST306074 DSIR Medicago truncatula cDNA clone pDSIR-7F8, mRNA
sequence
Length = 672
Score = 107 bits (229), Expect(2) = 5e-035
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSF G Q KC C+KT + +D L+ YHK C HCKG + SYSSM+ LYCK
Sbjct: 111 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 290
Query: 251 HFEQLFKXTGSFSKN 295
HFEQLFK G+FSKN
Sbjct: 291 HFEQLFKEHGNFSKN 335
Score = 60.6 bits (126), Expect(2) = 5e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PSK + FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 384 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 524
>gb|BE248356.1|BE248356 NF003F12DT1F1095 Drought Medicago truncatula cDNA clone NF003F12DT
5', mRNA sequence
Length = 642
Score = 107 bits (229), Expect(2) = 5e-035
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSF G Q KC C+KT + +D L+ YHK C HCKG + SYSSM+ LYCK
Sbjct: 128 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 307
Query: 251 HFEQLFKXTGSFSKN 295
HFEQLFK G+FSKN
Sbjct: 308 HFEQLFKEHGNFSKN 352
Score = 60.6 bits (126), Expect(2) = 5e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PSK + FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 401 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 541
>gb|CX526647.1|CX526647 s13dNF25B06AT057_513806 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 618
Score = 107 bits (229), Expect(2) = 5e-035
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSF G Q KC C+KT + +D L+ YHK C HCKG + SYSSM+ LYCK
Sbjct: 152 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 331
Query: 251 HFEQLFKXTGSFSKN 295
HFEQLFK G+FSKN
Sbjct: 332 HFEQLFKEHGNFSKN 376
Score = 60.6 bits (126), Expect(2) = 5e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PSK + FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 425 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 565
>gb|CX541456.1|CX541456 s13dNF44A04GS033_466214 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 549
Score = 107 bits (229), Expect(2) = 6e-033
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSF G Q KC C+KT + +D L+ YHK C HCKG + SYSSM+ LYCK
Sbjct: 144 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 323
Query: 251 HFEQLFKXTGSFSKN 295
HFEQLFK G+FSKN
Sbjct: 324 HFEQLFKEHGNFSKN 368
Score = 53.8 bits (111), Expect(2) = 6e-033
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHK 454
LTR PSK + FSGT +K A C KT YP +T+ YHK
Sbjct: 417 LTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHK 539
>gb|BF632531.1|BF632531 NF027A09DT1F1066 Drought Medicago truncatula cDNA clone NF027A09DT
5', mRNA sequence
Length = 562
Score = 107 bits (229), Expect(2) = 2e-032
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSF G Q KC C+KT + +D L+ YHK C HCKG + SYSSM+ LYCK
Sbjct: 128 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 307
Query: 251 HFEQLFKXTGSFSKN 295
HFEQLFK G+FSKN
Sbjct: 308 HFEQLFKEHGNFSKN 352
Score = 51.9 bits (107), Expect(2) = 2e-032
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2 / +3
Query: 347 SKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
+KL + FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 417 AKLRACFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 542
>gb|AW559538.1|AW559538 EST314586 DSIR Medicago truncatula cDNA clone pDSIR-19N4, mRNA
sequence
Length = 782
Score = 100 bits (212), Expect(2) = 1e-030
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC C+KT + +D LT I+HK C HCKG + +Y+S + LYC+
Sbjct: 49 MAFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 228
Query: 251 HFEQLFKXTGSFSKNF 298
HF+QLFK TGS K+F
Sbjct: 229 HFDQLFKRTGSLEKSF 276
Score = 53.8 bits (111), Expect(2) = 1e-030
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKC 469
A +K SS F GT DK + CQKT YP +T+ YHK KC
Sbjct: 331 AAAKASSMFGGTRDKFSGCQKTVYPTEKVTVNGTPYHKSCFKC 459
>gb|AJ498553.1|AJ498553 AJ498553 MTPOSE Medicago truncatula cDNA clone mt--acc955206a09,
mRNA sequence
Length = 755
Score = 100 bits (212), Expect(2) = 2e-030
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC C+KT + +D LT I+HK C HCKG + +Y+S + LYC+
Sbjct: 113 MAFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 292
Query: 251 HFEQLFKXTGSFSKNF 298
HF+QLFK TGS K+F
Sbjct: 293 HFDQLFKRTGSLEKSF 340
Score = 53.3 bits (110), Expect(2) = 2e-030
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +2
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKC 469
A +K SS F GT DK + CQKT YP +T+ YHK KC
Sbjct: 395 AAAKASSMFGGTRDKCSGCQKTVYPTEKVTVNGTPYHKSCFKC 523
>gb|BF638624.1|BF638624 NF062F05PL1F1045 Phosphate starved leaf Medicago truncatula cDNA
clone NF062F05PL 5', mRNA sequence
Length = 657
Score = 100 bits (213), Expect(2) = 2e-030
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC C+KT + +D LT I+HK C HCKG + +Y+S + LYC+
Sbjct: 166 MAFAGTTQKCXACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 345
Query: 251 HFEQLFKXTGSFSKNF 298
HF+QLFK TGS K+F
Sbjct: 346 HFDQLFKRTGSLEKSF 393
Score = 52.8 bits (109), Expect(2) = 2e-030
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2 / +1
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKC 469
A +K SS F GT DK CQKT YP +T+ YHK KC
Sbjct: 448 AAAKASSMFGGTRDKCXGCQKTVYPTEKVTVNGTPYHKSCFKC 576
>gb|BQ148732.1|BQ148732 NF080H09FL1F1080 Developing flower Medicago truncatula cDNA clone
NF080H09FL 5', mRNA sequence
Length = 645
Score = 100 bits (212), Expect(2) = 2e-030
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC C+KT + +D LT I+HK C HCKG + +Y+S + LYC+
Sbjct: 34 MAFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 213
Query: 251 HFEQLFKXTGSFSKNF 298
HF+QLFK TGS K+F
Sbjct: 214 HFDQLFKRTGSLEKSF 261
Score = 53.3 bits (110), Expect(2) = 2e-030
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKC 469
A +K SS F GT DK + CQKT YP +T+ YHK KC
Sbjct: 316 AAAKASSMFGGTRDKCSGCQKTVYPTEKVTVNGTPYHKSCFKC 444
>gb|CB893561.1|CB893561 EST646353 HOGA Medicago truncatula cDNA clone HOGA-28E14, mRNA
sequence
Length = 781
Score = 92.3 bits (195), Expect(2) = 4e-028
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +2 / +1
Query: 95 KCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTHFEQLFKX 274
KC C+KT + +D LT I+HK C HCKG + +Y+S + LYC+ HF+QLFK
Sbjct: 1 KCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQLFKR 180
Query: 275 TGSFSKNF 298
TGS K+F
Sbjct: 181 TGSLEKSF 204
Score = 53.3 bits (110), Expect(2) = 4e-028
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKC 469
A +K SS F GT DK + CQKT YP +T+ YHK KC
Sbjct: 259 AAAKASSMFGGTRDKCSGCQKTVYPTEKVTVNGTPYHKSCFKC 387
>gb|BE203860.1|BE203860 EST396536 KV0 Medicago truncatula cDNA clone pKV0-13C7, mRNA
sequence
Length = 698
Score = 92.3 bits (195), Expect(2) = 4e-028
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +2 / +3
Query: 95 KCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTHFEQLFKX 274
KC C+KT + +D LT I+HK C HCKG + +Y+S + LYC+ HF+QLFK
Sbjct: 6 KCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQLFKR 185
Query: 275 TGSFSKNF 298
TGS K+F
Sbjct: 186 TGSLEKSF 209
Score = 53.3 bits (110), Expect(2) = 4e-028
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKC 469
A +K SS F GT DK + CQKT YP +T+ YHK KC
Sbjct: 264 AAAKASSMFGGTRDKCSGCQKTVYPTEKVTVNGTPYHKSCFKC 392
>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence
Length = 127126
Score = 70.3 bits (147), Expect(3) = 3e-027
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSY 217
MSFTG DKC CDKT + +DLLT YHK+C HCKG ++C +
Sbjct: 81592 MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLTVCFF 81738
Score = 60.6 bits (126), Expect(3) = 3e-027
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 206 MCSYSSMDXXLYCKTHFEQLFKXTGSFSKNF 298
M +YSSMD LYCK HFEQLFK +G+FSKNF
Sbjct: 82081 MSTYSSMDGVLYCKPHFEQLFKESGNFSKNF 82173
Score = 45.5 bits (93), Expect(3) = 3e-027
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +2 / +1
Query: 338 RAPSKLSSAFSGTXDKXAACQKTXYP 415
R PS+LSS FSGT DK A C KT YP
Sbjct: 82558 RTPSRLSSMFSGTLDKCAVCTKTVYP 82635
>gb|AW126403.2|AW126403 N100511e rootphos(-) Medicago truncatula cDNA clone MHRP-6G10, mRNA
sequence
Length = 463
Score = 100 bits (212), Expect(2) = 3e-026
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC C+KT + +D LT I+HK C HCKG + +Y+S + LYC+
Sbjct: 103 MAFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 282
Query: 251 HFEQLFKXTGSFSKNF 298
HF+QLFK TGS K+F
Sbjct: 283 HFDQLFKRTGSLEKSF 330
Score = 38.6 bits (78), Expect(2) = 3e-026
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 341 APSKLSSAFSGTXDKXAACQKTXYP 415
A +K SS F GT DK + CQKT YP
Sbjct: 385 AAAKASSMFGGTRDKCSGCQKTVYP 459
>gb|AW692114.2|AW692114 NF047H01ST1F1000 Developing stem Medicago truncatula cDNA clone
NF047H01ST 5', mRNA sequence
Length = 468
Score = 100 bits (212), Expect(2) = 3e-026
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC C+KT + +D LT I+HK C HCKG + +Y+S + LYC+
Sbjct: 74 MAFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 253
Query: 251 HFEQLFKXTGSFSKNF 298
HF+QLFK TGS K+F
Sbjct: 254 HFDQLFKRTGSLEKSF 301
Score = 38.6 bits (78), Expect(2) = 3e-026
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / +2
Query: 341 APSKLSSAFSGTXDKXAACQKTXYP 415
A +K SS F GT DK + CQKT YP
Sbjct: 356 AAAKASSMFGGTRDKCSGCQKTVYP 430
>gb|BI271595.1|BI271595 NF092A02FL1F1008 Developing flower Medicago truncatula cDNA clone
NF092A02FL 5', mRNA sequence
Length = 349
Score = 115 bits (245), Expect = 6e-025
Identities = 45/85 (52%), Positives = 53/85 (62%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG DKC CDKT + +DLLT YHK+C HCKG +M +YSSMD LYCK
Sbjct: 89 MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLTMSTYSSMDGVLYCKP 268
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +G F + + DK
Sbjct: 269 HFEQLFKESGKFQQELSSKVF*EDK 343
>gb|BF519596.1|BF519596 EST457060 DSIL Medicago truncatula cDNA clone pDSIL-21M19, mRNA
sequence
Length = 450
Score = 107 bits (229), Expect = 1e-022
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSF G Q KC C+KT + +D L+ YHK C HCKG + SYSSM+ LYCK
Sbjct: 177 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 356
Query: 251 HFEQLFKXTGSFSKN 295
HFEQLFK G+FSKN
Sbjct: 357 HFEQLFKEHGNFSKN 401
>gb|BQ124953.1|BQ124953 EST610529 GLSD Medicago truncatula cDNA clone pGLSD-37P15, mRNA
sequence
Length = 775
Score = 51.9 bits (107), Expect(3) = 1e-021
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKG 196
SF G KC C+K ++++ LT ++HK+C HCKG
Sbjct: 105 SFAGTAQKCNTCEKKVYWVEQLTADNKVFHKSCFRCHHCKG 227
Score = 47.3 bits (97), Expect(3) = 1e-021
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 206 MCSYSSMDXXLYCKTHFEQLFKXTGSFSKNF 298
+ +Y S + LYCK HF+QLFK TGS K+F
Sbjct: 452 LSNYCSFESVLYCKPHFDQLFKMTGSLYKSF 544
Score = 43.7 bits (89), Expect(3) = 1e-021
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2 / +2
Query: 338 RAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
+A +K+S F+GT +K C+KT YP + + YHK +C+
Sbjct: 593 QAYNKVSRFFAGTQEKCVGCKKTVYPIEKVAVDGESYHKNCFRCT 727
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 272,754,032
Number of Sequences: 392609
Number of extensions: 2075237
Number of successful extensions: 16743
Number of sequences better than 1.0e-020: 21
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 14034401994
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)