TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QBJ4h04.xg.2.1
         (393 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BI271595.1|BI271595  NF092A02FL1F1008 Developing flower M...   100   8e-021

>gb|BI271595.1|BI271595 NF092A02FL1F1008 Developing flower Medicago truncatula cDNA clone
           NF092A02FL 5', mRNA sequence
          Length = 349

 Score =  100 bits (214), Expect = 8e-021
 Identities = 39/77 (50%), Positives = 46/77 (59%)
 Frame = +3 / +2

                                                                       
Query: 69  MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
           MSFTG   KC  CDK  + +DLLT     YHK+     HCKG  +M  YSSMD  LYCK 
Sbjct: 89  MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLTMSTYSSMDGVLYCKP 268

                            
Query: 249 HFXQLFKXTGSFSKNFT 299
           HF QLFK +G F +  +
Sbjct: 269 HFEQLFKESGKFQQELS 319



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 187,630,801
Number of Sequences: 392609
Number of extensions: 1194126
Number of successful extensions: 18741
Number of sequences better than 1.0e-020: 2
length of database: 147,244,331
effective HSP length: 52
effective length of database: 126,828,663
effective search space used: 9892635714
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)