TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAR1e04.yg.2.1
(405 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI272580.1|BI272580 NF024B08FL1F1064 Developing flower M... 196 1e-049
gb|AC149303.10| Medicago truncatula clone mth2-76a20, compl... 130 1e-041
gb|CA917739.1|CA917739 EST641886 GPOD Medicago truncatula c... 161 4e-039
gb|CA917740.1|CA917740 EST641887 GPOD Medicago truncatula c... 161 4e-039
gb|BI309197.1|BI309197 EST530607 GPOD Medicago truncatula c... 152 3e-036
gb|CA917068.1|CA917068 EST641215 GPOD Medicago truncatula c... 152 3e-036
gb|BG645927.1|BG645927 EST507546 KV3 Medicago truncatula cD... 151 4e-036
gb|CA921793.1|CA921793 EST639511 MTUS Medicago truncatula c... 149 2e-035
gb|CB891497.1|CB891497 EST648466 KV3 Medicago truncatula cD... 149 2e-035
gb|AW126324.2|AW126324 N100431e rootphos(-) Medicago trunca... 146 2e-034
gb|CA923196.1|CA923196 EST640914 MTUS Medicago truncatula c... 146 2e-034
gb|CA923183.1|CA923183 EST640901 MTUS Medicago truncatula c... 145 3e-034
gb|CB891121.1|CB891121 EST648090 KV3 Medicago truncatula cD... 145 3e-034
gb|CA923177.1|CA923177 EST640895 MTUS Medicago truncatula c... 145 3e-034
gb|AC144514.10| Medicago truncatula clone mth2-12j2, comple... 107 9e-031
gb|AC135467.15| Medicago truncatula clone mth2-34h12, compl... 107 9e-031
emb|CT009652.1| Medicago truncatula chromosome 5 clone mth2... 101 1e-029
emb|CT485798.1| Medicago truncatula chromosome 5 clone mth2... 99 1e-029
emb|CT033766.1| Medicago truncatula chromosome 5 clone mth4... 100 1e-028
gb|AL376231.1|AL376231 MtBB22B12R1 MtBB Medicago truncatula... 124 8e-028
gb|BI263580.1|BI263580 NF086G05PL1F1040 Phosphate starved l... 112 2e-024
gb|BG452384.1|BG452384 NF085G03LF1F1024 Developing leaf Med... 110 1e-023
gb|AL371739.1|AL371739 MtBA46B10R1 MtBA Medicago truncatula... 105 3e-022
gb|BG648532.1|BG648532 EST510151 HOGA Medicago truncatula c... 80 9e-022
>gb|BI272580.1|BI272580 NF024B08FL1F1064 Developing flower Medicago truncatula cDNA clone
NF024B08FL 5', mRNA sequence
Length = 640
Score = 196 bits (423), Expect = 1e-049
Identities = 75/102 (73%), Positives = 85/102 (83%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNFDA DT+ FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 230 NHPIHLHGYDFYIVAEGFGNFDAKKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGA 409
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
++HCHLDVHI WGLA LV DGVG++QS+++ D IC*
Sbjct: 410 WILHCHLDVHIGWGLATILLVXDGVGKLQSIQSPPQDLPIC* 535
Score = 121 bits (259), Expect = 5e-027
Identities = 59/102 (57%), Positives = 70/102 (68%)
Frame = -2 / -2
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
+S*Q+ S DC PTPSST + +A+PQ + TS+ QC PGLSAT R+TAQPLT
Sbjct: 540 LS*QIGRSCGGDCIDCNFPTPSSTNSIVAKPQPI*TSK*QCRIQAPGLSATNRITAQPLT 361
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMG 6
GT TVFL+GGS+ L VS ASKLP PSA M*KS P R +G
Sbjct: 360 GTATVFLIGGSTRLNFEVSFLASKLPNPSATM*KSYP*R*IG 235
>gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete sequence
Length = 141028
Score = 130 bits (278), Expect(2) = 1e-041
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADN 171
NHPIHLHGYDFYI+AEGFGNFDA DT+ FN+ DPPMRNTV VPVNGWAVIRFVADN
Sbjct: 40525 NHPIHLHGYDFYIVAEGFGNFDAKKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADN 40355
Score = 79.4 bits (167), Expect(2) = 2e-021
Identities = 38/55 (69%), Positives = 42/55 (76%)
Frame = -2 / +3
Query: 170 LSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMG 6
LSAT R+TAQPLTGT TVFL+GGS+ L VS ASKLP PSA M*KS P R +G
Sbjct: 40356 LSATNRITAQPLTGTATVFLIGGSTRLNFEVSFLASKLPNPSATM*KSYP*R*IG 40520
Score = 68.9 bits (144), Expect(2) = 1e-041
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = +1 / -3
Query: 175 GXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
G ++HCHLDVHI WGLA LVEDGVG++QS+++ D IC*
Sbjct: 40217 GAWILHCHLDVHIGWGLATILLVEDGVGKLQSIQSPPQDLPIC* 40086
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2 / +1
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSAT 159
+S*Q+ S DC PTPSST + +A+PQ + TS+ QC P + T
Sbjct: 40081 LS*QIGRSCGGDCIDCNFPTPSSTNSIVAKPQPI*TSK*QCRIQAPIIHTT 40233
>gb|CA917739.1|CA917739 EST641886 GPOD Medicago truncatula cDNA clone GPOD-37I21, mRNA
sequence
Length = 762
Score = 161 bits (347), Expect = 4e-039
Identities = 62/107 (57%), Positives = 74/107 (69%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHGYDF+++ +GFGN+DA D A FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 380 SHPLHLHGYDFFVVGQGFGNYDANKDPAKFNLVDPVERNTVGVPAGGWVAIRFFADNPGV 559
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVL 321
MHCHLD+H +WGL MA+LV DG Q L+ D C*L L L
Sbjct: 560 WFMHCHLDIHTSWGLRMAWLVLDGPDSNQKLQPPPSDLPKC*L*LTL 700
>gb|CA917740.1|CA917740 EST641887 GPOD Medicago truncatula cDNA clone GPOD-37I23, mRNA
sequence
Length = 769
Score = 161 bits (347), Expect = 4e-039
Identities = 62/107 (57%), Positives = 74/107 (69%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHGYDF+++ +GFGN+DA D A FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 381 SHPLHLHGYDFFVVGQGFGNYDANKDPAKFNLVDPVERNTVGVPAGGWVAIRFFADNPGV 560
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVL 321
MHCHLD+H +WGL MA+LV DG Q L+ D C*L L L
Sbjct: 561 WFMHCHLDIHTSWGLRMAWLVLDGPDSNQKLQPPPSDLPKC*L*LTL 701
>gb|BI309197.1|BI309197 EST530607 GPOD Medicago truncatula cDNA clone pGPOD-11A15 5' end,
mRNA sequence
Length = 705
Score = 152 bits (326), Expect = 3e-036
Identities = 57/102 (55%), Positives = 72/102 (70%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ G GN+D+ D+ FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 640 SHPVHLHGFNFFVVGRGVGNYDSKNDSKKFNLVDPVERNTVGVPAGGWVAIRFRADNPGV 461
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH TWGL MAFLV++G G QS+ A D C*
Sbjct: 460 WFMHCHLEVHTTWGLKMAFLVDNGKGPKQSVIAPPKDLPKC* 335
>gb|CA917068.1|CA917068 EST641215 GPOD Medicago truncatula cDNA clone GPOD-35G1, mRNA
sequence
Length = 700
Score = 152 bits (326), Expect = 3e-036
Identities = 57/102 (55%), Positives = 73/102 (71%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGNF+A +D A FN+ DP RNTV VP GW IRF+ADNPG
Sbjct: 610 SHPLHLHGFNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGV 431
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCH DVH++WGL MA++VEDG Q L D C*
Sbjct: 430 WLMHCHFDVHLSWGLRMAWIVEDGKLPDQKLPPPPKDLPKC* 305
>gb|BG645927.1|BG645927 EST507546 KV3 Medicago truncatula cDNA clone pKV3-48A7 5' end, mRNA
sequence
Length = 574
Score = 151 bits (325), Expect = 4e-036
Identities = 57/102 (55%), Positives = 70/102 (68%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHG++F+++ G GNFD+ D FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 418 NHPIHLHGFNFFVVGRGQGNFDSKKDVKKFNLVDPVERNTVGVPAGGWTAIRFKADNPGV 239
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL++H TWGL MAF+V++G G +SL D C*
Sbjct: 238 WFMHCHLEIHTTWGLKMAFVVDNGKGPNESLLPPPSDLPKC* 113
>gb|CA921793.1|CA921793 EST639511 MTUS Medicago truncatula cDNA clone MTUS-44E1, mRNA
sequence
Length = 763
Score = 149 bits (320), Expect = 2e-035
Identities = 50/91 (54%), Positives = 68/91 (74%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+H+HG+ F+++ GFGNF+ D A+FN+ DPP+RNT+G P GW IRF ADNPG
Sbjct: 548 DHPMHVHGFHFFVVGSGFGNFNPRTDPATFNLVDPPVRNTIGTPPGGWVAIRFKADNPGI 369
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSL 273
+HCH+D H+ WGL A LVE+GVG +QS+
Sbjct: 368 WFLHCHIDSHLNWGLGTALLVENGVGPLQSV 276
>gb|CB891497.1|CB891497 EST648466 KV3 Medicago truncatula cDNA clone KV3-50D17, mRNA
sequence
Length = 593
Score = 149 bits (320), Expect = 2e-035
Identities = 50/91 (54%), Positives = 68/91 (74%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+H+HG+ F+++ GFGNF+ D A+FN+ DPP+RNT+G P GW IRF ADNPG
Sbjct: 451 DHPMHVHGFHFFVVGSGFGNFNPRTDPATFNLVDPPVRNTIGTPPGGWVAIRFKADNPGI 272
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSL 273
+HCH+D H+ WGL A LVE+GVG +QS+
Sbjct: 271 WFLHCHIDSHLNWGLGTALLVENGVGPLQSV 179
>gb|AW126324.2|AW126324 N100431e rootphos(-) Medicago truncatula cDNA clone MHRP-5H6, mRNA
sequence
Length = 535
Score = 146 bits (313), Expect = 2e-034
Identities = 56/105 (53%), Positives = 69/105 (65%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP HLHGY+F+++ G GNFD D A +N+ DP RNTVGVP GW IRF A+NPG
Sbjct: 35 SHPFHLHGYNFFVVGTGIGNFDPAKDPAKYNLVDPMERNTVGVPTGGWTAIRFTANNPGV 214
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCHL++H WGL AF+VEDG G+ QS+ D C* L
Sbjct: 215 WFMHCHLELHTGWGLKTAFVVEDGPGKDQSVLPPPKDLPKC*ASL 349
>gb|CA923196.1|CA923196 EST640914 MTUS Medicago truncatula cDNA clone MTUS-64E1, mRNA
sequence
Length = 788
Score = 146 bits (313), Expect = 2e-034
Identities = 54/103 (52%), Positives = 73/103 (70%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGNFD+ +D +FN+ DP RNTVGVP GW IRF+ADNPG
Sbjct: 546 SHPLHLHGFNFFVVGQGFGNFDSNSDPQNFNLVDPVERNTVGVPSGGWVAIRFLADNPGV 367
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*L 309
MHCHL++H +WGL MA++V DG Q + D C*L
Sbjct: 366 WFMHCHLEIHTSWGLKMAWIVLDGKLPNQKVLPPPVDLPKC*L 238
>gb|CA923183.1|CA923183 EST640901 MTUS Medicago truncatula cDNA clone MTUS-64C5, mRNA
sequence
Length = 668
Score = 145 bits (312), Expect = 3e-034
Identities = 54/103 (52%), Positives = 72/103 (69%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGN+D+ D +FN+ DP RNT+GVP GW IRF+ADNPG
Sbjct: 440 SHPLHLHGFNFFVVGQGFGNYDSNKDPKNFNLVDPVERNTIGVPSGGWVAIRFLADNPGV 261
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*L 309
MHCHL+VH +WGL MA++V DG Q L D C*L
Sbjct: 260 WFMHCHLEVHTSWGLKMAWIVLDGKLPNQKLLPPPADLPKC*L 132
>gb|CB891121.1|CB891121 EST648090 KV3 Medicago truncatula cDNA clone KV3-49A12, mRNA
sequence
Length = 706
Score = 145 bits (312), Expect = 3e-034
Identities = 54/102 (52%), Positives = 69/102 (67%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+I+ +G GNFD D A FN+ DP RNT GVP GW +RF+ADNPG
Sbjct: 560 SHPLHLHGFNFFIVGQGNGNFDPKKDPAKFNLVDPVERNTAGVPAGGWVALRFLADNPGV 381
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH +WGL MA++V+DG Q L D C*
Sbjct: 380 WFMHCHLEVHTSWGLKMAWIVQDGKRRNQKLPPPPSDLPKC* 255
>gb|CA923177.1|CA923177 EST640895 MTUS Medicago truncatula cDNA clone MTUS-64B5, mRNA
sequence
Length = 735
Score = 145 bits (312), Expect = 3e-034
Identities = 54/103 (52%), Positives = 72/103 (69%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGN+D+ D +FN+ DP RNT+GVP GW IRF+ADNPG
Sbjct: 440 SHPLHLHGFNFFVVGQGFGNYDSNKDPKNFNLVDPVERNTIGVPSGGWVAIRFLADNPGV 261
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*L 309
MHCHL+VH +WGL MA++V DG Q L D C*L
Sbjct: 260 WFMHCHLEVHTSWGLKMAWIVLDGKLPNQKLLPPPADLPKC*L 132
>gb|AC144514.10| Medicago truncatula clone mth2-12j2, complete sequence
Length = 110255
Score = 107 bits (228), Expect(2) = 9e-031
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGNF+A +D A FN+ DP RNTV VP GW IRF+ADNPG
Sbjct: 40823 SHPLHLHGFNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGD 40644
Query: 181 XLMHC 195
L C
Sbjct: 40643 LLWFC 40629
Score = 54.7 bits (113), Expect(2) = 9e-031
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = +1 / -2
Query: 175 GXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
G LMHCH DVH++WGL MA++VEDG Q L D C*
Sbjct: 40408 GVWLMHCHFDVHLSWGLRMAWIVEDGKLPDQKLPPPPKDLPKC* 40277
>gb|AC135467.15| Medicago truncatula clone mth2-34h12, complete sequence
Length = 114945
Score = 107 bits (228), Expect(2) = 9e-031
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGNF+A +D A FN+ DP RNTV VP GW IRF+ADNPG
Sbjct: 37500 SHPLHLHGFNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGD 37679
Query: 181 XLMHC 195
L C
Sbjct: 37680 LLWFC 37694
Score = 54.7 bits (113), Expect(2) = 9e-031
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = +1 / +1
Query: 175 GXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
G LMHCH DVH++WGL MA++VEDG Q L D C*
Sbjct: 37915 GVWLMHCHFDVHLSWGLRMAWIVEDGKLPDQKLPPPPKDLPKC* 38046
>emb|CT009652.1| Medicago truncatula chromosome 5 clone mth2-124p21, WORKING DRAFT
SEQUENCE
Length = 110957
Score = 101 bits (215), Expect(2) = 1e-029
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPG 177
+HP+H+HG+ F+++ GFGNF+ D A+FN+ DPP+RNT+G P GW IRF ADNPG
Sbjct: 76579 DHPMHVHGFHFFVVGSGFGNFNPRTDPATFNLVDPPVRNTIGTPPGGWVAIRFKADNPG 76403
Score = 57.0 bits (118), Expect(2) = 1e-029
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / -1
Query: 172 PGXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSL 273
PG +HCH+D H+ WGL A LVE+GVG +QS+
Sbjct: 76160 PGIWFLHCHIDSHLNWGLGTALLVENGVGPLQSV 76059
>emb|CT485798.1| Medicago truncatula chromosome 5 clone mth2-24d7, WORKING DRAFT
SEQUENCE
Length = 116322
Score = 99.1 bits (210), Expect(2) = 1e-029
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPG 177
+HP HLHGY+F+++ G GNFD D A +N+ DP RNT+GVP GW IRF ADNPG
Sbjct: 51547 SHPFHLHGYNFFVVGTGIGNFDPAKDPAKYNLVDPIERNTIGVPTGGWTAIRFQADNPG 51371
Score = 98.7 bits (209), Expect(2) = 1e-028
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPG 177
+HP HLHGY+F+++ G GNFD D A +N+ DP RNTVGVP GW IRF A+NPG
Sbjct: 62591 SHPFHLHGYNFFVVGTGIGNFDPAKDPAKYNLVDPMERNTVGVPTGGWTAIRFTANNPG 62415
Score = 56.5 bits (117), Expect(2) = 1e-028
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +1 / -2
Query: 160 VADNPGXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
+ D+ G MHCHL++H WGL AF+VEDG G+ QS+ D C* L
Sbjct: 62213 IYDHAGVWFMHCHLELHTGWGLKTAFVVEDGPGKDQSVLPPPKDLPKC*ASL 62058
Score = 51.0 bits (105), Expect(2) = 1e-029
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1 / -3
Query: 157 FVADNPGXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
++ + G MHCHL++H WGL AFLVE+G + QS+ D C* ++
Sbjct: 51295 YIYNCTGVWFMHCHLELHTGWGLKTAFLVENGPNQGQSVLPPPKDLPSC*SLV 51137
>emb|CT033766.1| Medicago truncatula chromosome 5 clone mth4-42c9, WORKING DRAFT SEQUENCE
Length = 235225
Score = 99.6 bits (211), Expect(2) = 1e-028
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPG 177
NHPIHLHG++F+++ +G GNF+ DT FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 168688 NHPIHLHGFNFFVVGKGQGNFNPKKDTKKFNLVDPVERNTVGVPSGGWTAIRFRADNPG 168512
Score = 56.1 bits (116), Expect(2) = 1e-028
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +1 / -2
Query: 175 GXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
G MHCHL++H TWGL MAF+V++G G +SL D C*
Sbjct: 168003 GVWFMHCHLEIHTTWGLKMAFVVDNGKGPNESLLPPPSDLPKC* 167872
>gb|AL376231.1|AL376231 MtBB22B12R1 MtBB Medicago truncatula cDNA clone MtBB22B12 T7, mRNA
sequence
Length = 522
Score = 124 bits (265), Expect = 8e-028
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +1 / +3
Query: 49 GFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGXXLMHCHLDVHITWGLA 228
GFGNF+ D A+FN+ DPP+RNT+G P GW IRF ADNPG +HCH+D H+ WGL
Sbjct: 3 GFGNFNPRTDPATFNLVDPPVRNTIGTPPGGWVAIRFKADNPGIWFLHCHIDSHLNWGLG 182
Query: 229 MAFLVEDGVGEMQSL 273
A LVE+GVG +QS+
Sbjct: 183 TALLVENGVGPLQSV 227
>gb|BI263580.1|BI263580 NF086G05PL1F1040 Phosphate starved leaf Medicago truncatula cDNA
clone NF086G05PL 5', mRNA sequence
Length = 585
Score = 112 bits (240), Expect = 2e-024
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +1 / +1
Query: 58 NFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGXXLMHCHLDVHITWGLAMAF 237
+F+A +D A FN+ DP RNTV VP GW IRF+ADNPG LMHCH DVH++WGL MA+
Sbjct: 7 DFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAW 186
Query: 238 LVEDGVGEMQSLEAXXXDXXIC* 306
+VEDG Q L D C*
Sbjct: 187 IVEDGKLPDQKLPPPPKDLPKC* 255
>gb|BG452384.1|BG452384 NF085G03LF1F1024 Developing leaf Medicago truncatula cDNA clone
NF085G03LF 5', mRNA sequence
Length = 570
Score = 110 bits (235), Expect = 1e-023
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIH+HG++F++LA+GFGN++A D FN +P MRNT+ VPV GWAV+ F A+NPG
Sbjct: 357 NHPIHIHGFNFHVLAQGFGNYNATRDEPKFNFVNPQMRNTISVPVGGWAVVXFQANNPGI 536
Query: 181 XLMHCH 198
L+H H
Sbjct: 537 WLVHXH 554
>gb|AL371739.1|AL371739 MtBA46B10R1 MtBA Medicago truncatula cDNA clone MtBA46B10 T7, mRNA
sequence
Length = 550
Score = 105 bits (225), Expect = 3e-022
Identities = 43/83 (51%), Positives = 53/83 (63%)
Frame = +1 / +1
Query: 61 FDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGXXLMHCHLDVHITWGLAMAFL 240
+D+ D +FN+ DP RNT+GVP GW IRF+ADNPG MHCHL+VH +WGL MA++
Sbjct: 1 YDSNKDPKNFNLVDPVERNTIGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWI 180
Query: 241 VEDGVGEMQSLEAXXXDXXIC*L 309
V DG Q L D C*L
Sbjct: 181 VLDGKLPNQKLLPPPADLPKC*L 249
>gb|BG648532.1|BG648532 EST510151 HOGA Medicago truncatula cDNA clone pHOGA-23E13 5' end,
mRNA sequence
Length = 834
Score = 80.3 bits (169), Expect(2) = 9e-022
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRF 159
+HP+HLHG +F++LA+ FG F+ D +N+ +P +RNTV VPV GWA IRF
Sbjct: 558 SHPMHLHGMNFHVLAQDFGIFNPTTDKLKYNLVNPSIRNTVAVPVGGWAAIRF 716
Score = 43.2 bits (88), Expect(2) = 9e-022
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1 / +2
Query: 166 DNPGXXLMHCHLDVHITWGLAMAFLV 243
+NPG +HCH+D H WGL AF+V
Sbjct: 722 NNPGVWFLHCHVDDHNLWGLVTAFIV 799
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 220,424,454
Number of Sequences: 392609
Number of extensions: 1980489
Number of successful extensions: 37563
Number of sequences better than 1.0e-020: 29
length of database: 147,244,331
effective HSP length: 52
effective length of database: 126,828,663
effective search space used: 10399950366
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)