TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF1g01.yg.2.1
(335 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW559770.1|AW559770 EST314818 DSIR Medicago truncatula c... 188 2e-047
gb|CF068458.1|CF068458 EST669179 MTUS Medicago truncatula c... 188 2e-047
gb|DW015121.1|DW015121 EST1224082 MTY Medicago truncatula c... 182 1e-045
emb|CR350839.1| mte1-86C17FM1 BAC end, cultivar Jemalong A1... 171 4e-042
emb|CR351348.1| mte1-86D18FM1 BAC end, cultivar Jemalong A1... 171 4e-042
gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORK... 171 4e-042
gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKI... 171 4e-042
gb|BF636038.1|BF636038 NF069A09DT1F1068 Drought Medicago tr... 171 5e-042
gb|CX535313.1|CX535313 s13dNF39D04MJ042_388800 Methyl Jasmo... 168 3e-041
gb|AC137603.16| Medicago truncatula clone mth2-14b10, compl... 113 6e-040
gb|AC158209.13| Medicago truncatula clone mth2-154h5, compl... 114 9e-040
gb|AC122723.6| Medicago truncatula clone mth2-5i15, complet... 110 1e-038
gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone m... 110 1e-038
gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKIN... 105 3e-037
gb|AC157648.18| Medicago truncatula clone mth2-68d9, comple... 105 3e-037
gb|AC170583.6| Medicago truncatula clone mth2-19b5, complet... 76 7e-036
gb|BI271181.1|BI271181 NF051G10FL1F1084 Developing flower M... 136 1e-031
gb|AJ500423.1|AJ500423 AJ500423 MTGIM Medicago truncatula c... 106 1e-022
gb|BF004482.1|BF004482 EST432980 KV1 Medicago truncatula cD... 104 5e-022
>gb|AW559770.1|AW559770 EST314818 DSIR Medicago truncatula cDNA clone pDSIR-24N15, mRNA
sequence
Length = 653
Score = 188 bits (406), Expect = 2e-047
Identities = 79/88 (89%), Positives = 81/88 (92%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF ITRGGI KASRVINISEDIYAGFNSTLR GN+THHEYIQVGKG
Sbjct: 8 KVRMHYGFPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNVTHHEYIQVGKG 187
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQIALFEGKVAGGNGEQVLSRD+
Sbjct: 188 RDVGLNQIALFEGKVAGGNGEQVLSRDI 271
Score = 143 bits (307), Expect = 9e-034
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = +3 / -3
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S L TCSPLPPATFPS AIWFKPTS PFPT +YSWCV FP R VEL PAYISSLILITR
Sbjct: 267 SLLSTCSPLPPATFPSKRAIWFKPTSLPFPT*MYSWCVTFPSRNVELKPAYISSLILITR 88
Query: 186 DAXXMPPRVXXNIRSKTSG 242
+A +PPRV NI S TSG
Sbjct: 87 EALLIPPRVM*NILSNTSG 31
>gb|CF068458.1|CF068458 EST669179 MTUS Medicago truncatula cDNA clone MTUS-8C4, mRNA
sequence
Length = 714
Score = 188 bits (406), Expect = 2e-047
Identities = 79/88 (89%), Positives = 81/88 (92%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF ITRGGI KASRVINISEDIYAGFNSTLR GN+THHEYIQVGKG
Sbjct: 32 KVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNVTHHEYIQVGKG 211
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQIALFEGKVAGGNGEQVLSRD+
Sbjct: 212 RDVGLNQIALFEGKVAGGNGEQVLSRDI 295
Score = 143 bits (307), Expect = 9e-034
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = +3 / -1
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S L TCSPLPPATFPS AIWFKPTS PFPT +YSWCV FP R VEL PAYISSLILITR
Sbjct: 291 SLLSTCSPLPPATFPSKRAIWFKPTSLPFPT*MYSWCVTFPSRNVELKPAYISSLILITR 112
Query: 186 DAXXMPPRVXXNIRSKTSG 242
+A +PPRV NI S TSG
Sbjct: 111 EALLIPPRVM*NILSNTSG 55
>gb|DW015121.1|DW015121 EST1224082 MTY Medicago truncatula cDNA clone MTYA123, mRNA
sequence
Length = 634
Score = 182 bits (393), Expect = 1e-045
Identities = 76/88 (86%), Positives = 80/88 (90%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR+F ITRGGI KASRVINISEDIY+GFNSTL QGNITHHEYIQVGKG
Sbjct: 90 KVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSGFNSTLCQGNITHHEYIQVGKG 269
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQIALFEGKV+ GNGEQVLSRD+
Sbjct: 270 RDVGLNQIALFEGKVSSGNGEQVLSRDI 353
Score = 118 bits (252), Expect = 4e-026
Identities = 56/79 (70%), Positives = 59/79 (74%)
Frame = +3 / -1
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
SRLRTCSPLP TFPSNSAI +PTS P PT IYS VMFP KVELNP ISSLILITR
Sbjct: 349 SRLRTCSPLPLETFPSNSAI*LRPTSLPLPT*IYS**VMFP*HKVELNPE*ISSLILITR 170
Query: 186 DAXXMPPRVXXNIRSKTSG 242
+A +PPRV SKTSG
Sbjct: 169 EALLIPPRVMWKTLSKTSG 113
>emb|CR350839.1| mte1-86C17FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 765
Score = 171 bits (368), Expect = 4e-042
Identities = 69/88 (78%), Positives = 77/88 (87%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + +TRGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 551 KVRMHYGHPDVFDRFWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 372
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ+LSRDV
Sbjct: 371 RDVGLNQVSMFEAKVASGNGEQILSRDV 288
Score = 102 bits (217), Expect = 2e-021
Identities = 47/80 (58%), Positives = 55/80 (68%)
Frame = +3 / +1
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS LR CSPLP AT SN F+PTS PFPT +YSW V P R+V+LNPA +SSL+LIT
Sbjct: 289 TSLLRICSPLPLATLASNIDT*FRPTSLPFPT*MYSW*VTLPPRRVQLNPANMSSLMLIT 468
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPRV S TSG
Sbjct: 469 LEALLIPPRVKNQNLSNTSG 528
>emb|CR351348.1| mte1-86D18FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 654
Score = 171 bits (368), Expect = 4e-042
Identities = 69/88 (78%), Positives = 77/88 (87%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + +TRGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 536 KVRMHYGHPDVFDRFWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 357
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ+LSRDV
Sbjct: 356 RDVGLNQVSMFEAKVASGNGEQILSRDV 273
Score = 102 bits (217), Expect(2) = 1e-021
Identities = 47/80 (58%), Positives = 55/80 (68%)
Frame = +3 / +1
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS LR CSPLP AT SN F+PTS PFPT +YSW V P R+V+LNPA +SSL+LIT
Sbjct: 274 TSLLRICSPLPLATLASNIDT*FRPTSLPFPT*MYSW*VTLPPRRVQLNPANMSSLMLIT 453
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPRV S TSG
Sbjct: 454 LEALLIPPRVKNQNLSNTSG 513
Score = 19.4 bits (36), Expect(2) = 1e-021
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +3 / +1
Query: 273 AXXXCPXXTKLXXXXXINXA 332
A CP TKL +N A
Sbjct: 547 AKTLCPRVTKLVSWADMNQA 606
>gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORKING DRAFT SEQUENCE, 3
unordered pieces
Length = 118726
Score = 171 bits (368), Expect = 4e-042
Identities = 69/88 (78%), Positives = 77/88 (87%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + +TRGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 20676 KVRMHYGHPDVFDRFWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 20855
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ+LSRDV
Sbjct: 20856 RDVGLNQVSMFEAKVASGNGEQILSRDV 20939
Score = 102 bits (217), Expect = 2e-021
Identities = 47/80 (58%), Positives = 55/80 (68%)
Frame = +3 / -1
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS LR CSPLP AT SN F+PTS PFPT +YSW V P R+V+LNPA +SSL+LIT
Sbjct: 20938 TSLLRICSPLPLATLASNIDT*FRPTSLPFPT*MYSW*VTLPPRRVQLNPANMSSLMLIT 20759
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPRV S TSG
Sbjct: 20758 LEALLIPPRVKNQNLSNTSG 20699
>gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKING DRAFT SEQUENCE
Length = 118519
Score = 171 bits (368), Expect = 4e-042
Identities = 69/88 (78%), Positives = 77/88 (87%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + +TRGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 12121 KVRMHYGHPDVFDRFWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 11942
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ+LSRDV
Sbjct: 11941 RDVGLNQVSMFEAKVASGNGEQILSRDV 11858
Score = 102 bits (217), Expect = 2e-021
Identities = 47/80 (58%), Positives = 55/80 (68%)
Frame = +3 / +3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS LR CSPLP AT SN F+PTS PFPT +YSW V P R+V+LNPA +SSL+LIT
Sbjct: 11859 TSLLRICSPLPLATLASNIDT*FRPTSLPFPT*MYSW*VTLPPRRVQLNPANMSSLMLIT 12038
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPRV S TSG
Sbjct: 12039 LEALLIPPRVKNQNLSNTSG 12098
>gb|BF636038.1|BF636038 NF069A09DT1F1068 Drought Medicago truncatula cDNA clone NF069A09DT
5', mRNA sequence
Length = 668
Score = 171 bits (367), Expect = 5e-042
Identities = 66/88 (75%), Positives = 79/88 (89%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AGFNSTLR+G++THHEYIQVGKG
Sbjct: 35 RVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGSVTHHEYIQVGKG 214
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE K+A GNGEQ LSRDV
Sbjct: 215 RDVGLNQISMFEAKIANGNGEQTLSRDV 298
>gb|CX535313.1|CX535313 s13dNF39D04MJ042_388800 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 521
Score = 168 bits (361), Expect = 3e-041
Identities = 65/86 (75%), Positives = 77/86 (89%)
Frame = -2 / +2
Query: 259 RXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRD 80
R Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AGFNSTLR+G++THHEYIQVGKGRD
Sbjct: 5 RGHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGSVTHHEYIQVGKGRD 184
Query: 79 VGLNQIALFEGKVAGGNGEQVLSRDV 2
VGLNQI++FE K+A GNGEQ LSRDV
Sbjct: 185 VGLNQISMFEAKIANGNGEQTLSRDV 262
>gb|AC137603.16| Medicago truncatula clone mth2-14b10, complete sequence
Length = 109793
Score = 113 bits (242), Expect(2) = 6e-040
Identities = 43/53 (81%), Positives = 50/53 (94%)
Frame = -2 / -2
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
++AGFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRDV
Sbjct: 62344 LFAGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDV 62186
Score = 75.8 bits (159), Expect(3) = 6e-036
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = -2 / -3
Query: 103 IQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
IQVGKGRDVGLNQIALFEGKV+ GNGEQVLSRD+
Sbjct: 4764 IQVGKGRDVGLNQIALFEGKVSSGNGEQVLSRDI 4663
Score = 73.9 bits (155), Expect(3) = 6e-036
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDR+F ITRGGI KASRVINISEDIY+G
Sbjct: 5512 RVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSG 5396
Score = 70.3 bits (147), Expect(2) = 6e-040
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF +TRGG+ KAS+VIN+SEDI+AG
Sbjct: 62549 RVRFHYGHPDVFDRIFHLTRGGVSKASKVINLSEDIFAG 62433
Score = 53.3 bits (110), Expect(3) = 6e-036
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2 / -1
Query: 157 YAGFNSTLRQGNITHHEYIQV 95
Y GFNSTLRQGNITHHEYIQV
Sbjct: 4880 YTGFNSTLRQGNITHHEYIQV 4818
>gb|AC158209.13| Medicago truncatula clone mth2-154h5, complete sequence
Length = 93864
Score = 114 bits (243), Expect(2) = 9e-040
Identities = 45/52 (86%), Positives = 50/52 (96%)
Frame = -2 / -1
Query: 157 YAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
Y+GFNSTLR+GNITHHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ+LSRD+
Sbjct: 56913 YSGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDI 56758
Score = 69.3 bits (145), Expect(2) = 9e-040
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF +TRGGI KASR IN+SEDI+AG
Sbjct: 57098 RVRFHYGHPDVFDRIFHVTRGGISKASRGINLSEDIFAG 56982
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence
Length = 105353
Score = 110 bits (234), Expect(2) = 1e-038
Identities = 41/53 (77%), Positives = 50/53 (94%)
Frame = -2 / +3
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+++GFNSTLR+G++THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRDV
Sbjct: 78948 LFSGFNSTLREGSVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDV 79106
Score = 69.3 bits (145), Expect(2) = 1e-038
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AG
Sbjct: 78741 RVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAG 78857
>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete
sequence
Length = 103090
Score = 110 bits (234), Expect(2) = 1e-038
Identities = 41/53 (77%), Positives = 50/53 (94%)
Frame = -2 / +3
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+++GFNSTLR+G++THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRDV
Sbjct: 7551 LFSGFNSTLREGSVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDV 7709
Score = 69.3 bits (145), Expect(2) = 1e-038
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AG
Sbjct: 7344 RVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAG 7460
>gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 116277
Score = 105 bits (224), Expect(2) = 3e-037
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / -2
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
G+NSTLRQG ITHHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ L RDV
Sbjct: 98129 GYNSTLRQGYITHHEYIQVGKGRDVGLNQISLFEAKVANGNGEQTLCRDV 97980
Score = 69.3 bits (145), Expect(2) = 3e-037
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDRIF ITRGGI KAS+ IN+SEDI+AG
Sbjct: 98319 RVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAG 98203
>gb|AC157648.18| Medicago truncatula clone mth2-68d9, complete sequence
Length = 84361
Score = 105 bits (224), Expect(2) = 3e-037
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / +3
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
G+NSTLRQG ITHHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ L RDV
Sbjct: 75705 GYNSTLRQGYITHHEYIQVGKGRDVGLNQISLFEAKVANGNGEQTLCRDV 75854
Score = 69.3 bits (145), Expect(2) = 3e-037
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDRIF ITRGGI KAS+ IN+SEDI+AG
Sbjct: 75515 RVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAG 75631
>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
Length = 113632
Score = 75.8 bits (159), Expect(3) = 7e-036
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = -2 / +2
Query: 103 IQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
IQVGKGRDVGLNQIALFEGKV+ GNGEQVLSRD+
Sbjct: 5516 IQVGKGRDVGLNQIALFEGKVSSGNGEQVLSRDI 5617
Score = 73.9 bits (155), Expect(3) = 7e-036
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDR+F ITRGGI KASRVINISEDIY+G
Sbjct: 4768 RVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSG 4884
Score = 53.3 bits (110), Expect(3) = 7e-036
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2 / +3
Query: 157 YAGFNSTLRQGNITHHEYIQV 95
Y GFNSTLRQGNITHHEYIQV
Sbjct: 5400 YTGFNSTLRQGNITHHEYIQV 5462
>gb|BI271181.1|BI271181 NF051G10FL1F1084 Developing flower Medicago truncatula cDNA clone
NF051G10FL 5', mRNA sequence
Length = 520
Score = 136 bits (291), Expect = 1e-031
Identities = 56/64 (87%), Positives = 60/64 (93%)
Frame = -2 / +1
Query: 193 KASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVL 14
KASRVINISEDI+AGFN TLR GN+THHEYIQVGKGRDVGLNQI++FE KVA GNGEQVL
Sbjct: 4 KASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKGRDVGLNQISMFEAKVASGNGEQVL 183
Query: 13 SRDV 2
SRDV
Sbjct: 184 SRDV 195
>gb|AJ500423.1|AJ500423 AJ500423 MTGIM Medicago truncatula cDNA clone mtgmacc120016c03,
mRNA sequence
Length = 581
Score = 106 bits (227), Expect = 1e-022
Identities = 39/54 (72%), Positives = 48/54 (88%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEY 104
KVR Y PDVFDR+F +TRGG+ KAS+V+N+SEDI+AGFNSTLR+GN+THHEY
Sbjct: 163 KVRFHYGHPDVFDRLFHLTRGGVSKASKVVNLSEDIFAGFNSTLREGNVTHHEY 2
>gb|BF004482.1|BF004482 EST432980 KV1 Medicago truncatula cDNA clone pKV1-17D12, mRNA
sequence
Length = 617
Score = 104 bits (222), Expect = 5e-022
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = -2 / +2
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+G++THHEYIQVGKGRDVGLNQ ++FE K+A GNGEQ LSRDV
Sbjct: 2 GFNSTLREGSVTHHEYIQVGKGRDVGLNQSSMFEAKIANGNGEQTLSRDV 151
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 239,386,097
Number of Sequences: 392609
Number of extensions: 2771092
Number of successful extensions: 84160
Number of sequences better than 1.0e-020: 24
length of database: 147,244,331
effective HSP length: 51
effective length of database: 127,221,272
effective search space used: 7633276320
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)