TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAF13b04.yg.2.1
         (370 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CF068458.1|CF068458  EST669179 MTUS Medicago truncatula c...   133   2e-037
gb|BF632590.1|BF632590  NF032G03DT1F1021 Drought Medicago tr...   149   1e-035
gb|BF641357.1|BF641357  NF061B11IN1F1092 Insect herbivory Me...   127   1e-033
gb|AW559770.1|AW559770  EST314818 DSIR Medicago truncatula c...   142   3e-033
gb|BF004482.1|BF004482  EST432980 KV1 Medicago truncatula cD...   141   5e-033
gb|AC152184.1|  Medicago truncatula chromosome 7 BAC clone m...   141   5e-033
gb|AC122723.6|  Medicago truncatula clone mth2-5i15, complet...   141   5e-033
gb|AC137603.16|  Medicago truncatula clone mth2-14b10, compl...   140   1e-032
gb|AC150782.12|  Medicago truncatula clone mth2-116a21, WORK...   125   6e-032
gb|AC158736.12|  Medicago truncatula clone mth2-165n2, WORKI...   125   6e-032
gb|AC152887.20|  Medicago truncatula clone mth2-91j4, WORKIN...   136   2e-031
gb|AC157648.18|  Medicago truncatula clone mth2-68d9, comple...   136   2e-031
gb|AC170583.6|  Medicago truncatula clone mth2-19b5, complet...    85   2e-031
gb|AC158209.13|  Medicago truncatula clone mth2-154h5, compl...   135   2e-031
gb|BF004186.1|BF004186  EST432684 KV1 Medicago truncatula cD...   134   6e-031
>gb|CF068458.1|CF068458 EST669179 MTUS Medicago truncatula cDNA clone MTUS-8C4, mRNA
           sequence
          Length = 714

 Score =  133 bits (285), Expect(2) = 2e-037
 Identities = 55/91 (60%), Positives = 65/91 (71%)
 Frame = +3 / +2

                                                                       
Query: 18  YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
           YIFLYG+ YLA SG+ E++  +A +            QFL QIGVFTAVPMI+GFILE G
Sbjct: 395 YIFLYGRAYLAFSGLDEAVSEKAKLLGNTALDAALNAQFLVQIGVFTAVPMIMGFILELG 574

                                          
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYF 290
           +L A   FITMQ Q+CSVFFTFSLGT+TH F
Sbjct: 575 LLKAVFSFITMQLQLCSVFFTFSLGTKTHLF 667

 Score = 42.8 bits (87), Expect(2) = 2e-037
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3 / +3

                            
Query: 285 YFGRAILHGGAKYRATG 335
           YFGR +LHGGAKYRATG
Sbjct: 663 YFGRTVLHGGAKYRATG 713
>gb|BF632590.1|BF632590 NF032G03DT1F1021 Drought Medicago truncatula cDNA clone NF032G03DT
           5', mRNA sequence
          Length = 452

 Score =  149 bits (321), Expect = 1e-035
 Identities = 62/89 (69%), Positives = 68/89 (76%)
 Frame = +3 / +3

                                                                       
Query: 18  YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
           Y FLYGK YLALSGVGE I+ RA I           TQFLFQIG+FTAVPM+LGF+LE G
Sbjct: 186 YAFLYGKTYLALSGVGEIIEERAKITKNTALSAALNTQFLFQIGIFTAVPMVLGFVLEQG 365

                                        
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTH 284
            L A V FITMQFQ+C+VFFTFSLGTRTH
Sbjct: 366 FLRAVVNFITMQFQLCTVFFTFSLGTRTH 452

 Score =  120 bits (257), Expect = 8e-027
 Identities = 53/86 (61%), Positives = 62/86 (72%)
 Frame = -1 / -2

                                                                       
Query: 283 WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRIMGTAVNTPIWKRN*VFRAAFKA 104
           WVLVP EKVK T    NCIV+  T A+K P SR KP+ +GTAVN PIWKRN VF+AA +A
Sbjct: 451 WVLVPKEKVKKTVQS*NCIVMKLTTALKKPCSRTKPKTIGTAVNIPIWKRNCVFKAALRA 272

                                     
Query: 103 AFCSISALF*IDSPTPDKARYIFP*R 26
            F  I AL  I SPTP+ A+Y+FP*R
Sbjct: 271 VFLVILALSSIISPTPESAKYVFP*R 194
>gb|BF641357.1|BF641357 NF061B11IN1F1092 Insect herbivory Medicago truncatula cDNA clone
           NF061B11IN 5', mRNA sequence
          Length = 660

 Score =  127 bits (272), Expect(2) = 1e-033
 Identities = 51/74 (68%), Positives = 61/74 (82%)
 Frame = +3 / +1

                                                                       
Query: 129 QFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILH 308
           QF+ Q+G+FTA+PM++   LE G L A   F+TMQ Q+ S+FFTFSLGTRTH+FGR ILH
Sbjct: 292 QFIIQLGIFTALPMVVENTLEHGFLPAVWDFLTMQLQLGSLFFTFSLGTRTHFFGRTILH 471

                         
Query: 309 GGAKYRATGRGFVV 350
           GGAKYRATGRGFVV
Sbjct: 472 GGAKYRATGRGFVV 513

 Score = 35.4 bits (71), Expect(2) = 1e-033
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +3 / +1

                                  
Query: 18  YIFLYGKMYLALSGVGESIQNRA 86
           Y FL+G++Y+ALSG+ +  QN A
Sbjct: 187 YAFLWGRLYMALSGIEKEAQNNA 255
>gb|AW559770.1|AW559770 EST314818 DSIR Medicago truncatula cDNA clone pDSIR-24N15, mRNA
           sequence
          Length = 653

 Score =  142 bits (304), Expect = 3e-033
 Identities = 58/93 (62%), Positives = 68/93 (73%)
 Frame = +3 / +2

                                                                       
Query: 18  YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
           YIFLYG+ YLA SG+ E++  +A +            QFL QIGVFTAVPMI+GFILE G
Sbjct: 371 YIFLYGRAYLAFSGLDEAVSEKAKLLGNTALDAALNAQFLVQIGVFTAVPMIMGFILELG 550

                                            
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGR 296
           +L A   FITMQ Q+CSVFFTFSLGT+THYFGR
Sbjct: 551 LLKAVFSFITMQLQLCSVFFTFSLGTKTHYFGR 649
>gb|BF004482.1|BF004482 EST432980 KV1 Medicago truncatula cDNA clone pKV1-17D12, mRNA
           sequence
          Length = 617

 Score =  141 bits (302), Expect = 5e-033
 Identities = 60/111 (54%), Positives = 73/111 (65%)
 Frame = +3 / +2

                                                                       
Query: 18  YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
           YIFLYG++YL LSG+ E +  +  I           +Q   QIG   A+PM++   LE G
Sbjct: 251 YIFLYGRLYLVLSGLEEGLSAQKAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERG 430

                                                              
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
             TA  +FI MQ Q+  VFFTFSLGT+THYFGR +LHGGAKYR TGRGFVV
Sbjct: 431 FRTALSEFILMQLQLAPVFFTFSLGTKTHYFGRTLLHGGAKYRPTGRGFVV 583
>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete
            sequence
          Length = 103090

 Score =  141 bits (302), Expect = 5e-033
 Identities = 60/111 (54%), Positives = 73/111 (65%)
 Frame = +3 / +1

                                                                        
Query: 18   YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
            YIFLYG++YL LSG+ E +  +  I           +Q   QIG   A+PM++   LE G
Sbjct: 8065 YIFLYGRLYLVLSGLEEGLSAQKAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERG 8244

                                                               
Query: 198  VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
              TA  +FI MQ Q+  VFFTFSLGT+THYFGR +LHGGAKYR TGRGFVV
Sbjct: 8245 FRTALSEFILMQLQLAPVFFTFSLGTKTHYFGRTLLHGGAKYRPTGRGFVV 8397
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence
          Length = 105353

 Score =  141 bits (302), Expect = 5e-033
 Identities = 60/111 (54%), Positives = 73/111 (65%)
 Frame = +3 / +1

                                                                         
Query: 18    YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
             YIFLYG++YL LSG+ E +  +  I           +Q   QIG   A+PM++   LE G
Sbjct: 79462 YIFLYGRLYLVLSGLEEGLSAQKAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERG 79641

                                                                
Query: 198   VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
               TA  +FI MQ Q+  VFFTFSLGT+THYFGR +LHGGAKYR TGRGFVV
Sbjct: 79642 FRTALSEFILMQLQLAPVFFTFSLGTKTHYFGRTLLHGGAKYRPTGRGFVV 79794
>gb|AC137603.16| Medicago truncatula clone mth2-14b10, complete sequence
          Length = 109793

 Score =  140 bits (300), Expect = 1e-032
 Identities = 58/111 (52%), Positives = 73/111 (65%)
 Frame = +3 / -1

                                                                         
Query: 18    YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
             Y+FLYG++YL LSG+ E +  +  I           +Q   QIG   A+PM++   LE G
Sbjct: 61997 YVFLYGRLYLVLSGLEEGLSTQKAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERG 61818

                                                                
Query: 198   VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
               TA  +FI MQ Q+  VFFTFSLGT+THY+GR +LHGGAKYR TGRGFVV
Sbjct: 61817 FRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRPTGRGFVV 61665

 Score = 85.4 bits (180), Expect(2) = 2e-031
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = +3 / -2

                                                    
Query: 201  LTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAK 320
            L A V FITMQFQ+C+VFFTFSLGTRTHYFGR ILHGGA+
Sbjct: 2113 LQAVVNFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGAR 1994

 Score = 78.5 bits (165), Expect(2) = 2e-031
 Identities = 34/59 (57%), Positives = 39/59 (66%)
 Frame = +3 / -3

                                                                       
Query: 39   MYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESGVLTAFV 215
            +Y ALSGVGE I+ RA I           TQFLFQIG+FTAVPM+LGF+LE G L   V
Sbjct: 2499 LY*ALSGVGEIIEERAKITKNTALSAALNTQFLFQIGIFTAVPMVLGFVLEQGFLRVSV 2323

 Score = 75.3 bits (158), Expect(2) = 3e-021
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = -1 / +2

                                                                      
Query: 214  TKAVKTPDSRMKPRIMGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKARY 41
            T  +K P SR KP+ +GTAVN PIWKRN VF+AA +A F  I AL  I SPTP+ A Y
Sbjct: 2324 TLTLKKPCSRTKPKTIGTAVNIPIWKRNCVFKAALRAVFLVILALSSIISPTPESA*Y 2497

 Score = 54.2 bits (112), Expect(2) = 3e-021
 Identities = 25/43 (58%), Positives = 27/43 (62%)
 Frame = -1 / +3

                                                       
Query: 316  APPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDS 188
            APP  I RPK*WVLVP EKVK T    NCIV+  T A +   S
Sbjct: 1998 APP*RIVRPK*WVLVPKEKVKKTVQS*NCIVMKLTTACRQKKS 2126
>gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORKING DRAFT SEQUENCE, 3
             unordered pieces
          Length = 118726

 Score =  125 bits (267), Expect(2) = 6e-032
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = +3 / +3

                                                                         
Query: 129   QFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILH 308
             QF+ Q+G+FTA+PMI+   LE G L A   F+TMQ Q+ SVF+TFS+GTR+H+FGR ILH
Sbjct: 21144 QFIIQLGLFTALPMIVENSLEHGFLQAIWDFLTMQLQLSSVFYTFSMGTRSHFFGRTILH 21323

                           
Query: 309   GGAKYRATGRGFVV 350
             GGAKYRATGRGFVV
Sbjct: 21324 GGAKYRATGRGFVV 21365

 Score = 32.2 bits (64), Expect(2) = 6e-032
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +3 / +3

                                     
Query: 18    YIFLYGKMYLALSGVGESIQNRAD 89
             Y FL+ ++YLALSGV +S+++ ++
Sbjct: 21039 YAFLWSRLYLALSGVEKSMESNSN 21110
>gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKING DRAFT SEQUENCE
          Length = 118519

 Score =  125 bits (267), Expect(2) = 6e-032
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = +3 / -1

                                                                         
Query: 129   QFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILH 308
             QF+ Q+G+FTA+PMI+   LE G L A   F+TMQ Q+ SVF+TFS+GTR+H+FGR ILH
Sbjct: 11653 QFIIQLGLFTALPMIVENSLEHGFLQAIWDFLTMQLQLSSVFYTFSMGTRSHFFGRTILH 11474

                           
Query: 309   GGAKYRATGRGFVV 350
             GGAKYRATGRGFVV
Sbjct: 11473 GGAKYRATGRGFVV 11432

 Score = 32.2 bits (64), Expect(2) = 6e-032
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +3 / -1

                                     
Query: 18    YIFLYGKMYLALSGVGESIQNRAD 89
             Y FL+ ++YLALSGV +S+++ ++
Sbjct: 11758 YAFLWSRLYLALSGVEKSMESNSN 11687
>gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKING DRAFT SEQUENCE, 2 ordered
             pieces
          Length = 116277

 Score =  136 bits (291), Expect = 2e-031
 Identities = 54/111 (48%), Positives = 73/111 (65%)
 Frame = +3 / -1

                                                                         
Query: 18    YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
             Y+FLYG++Y+ LSGV   I + ++I           +Q + Q+G+   +PM++   LE G
Sbjct: 97479 YVFLYGRLYMVLSGVEREIISSSNIHQSKALEQALASQSVVQLGLLLVLPMVMEIGLEKG 97300

                                                                
Query: 198   VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
               TA   FI MQ Q+ SVFFTF LGT+ HY+GR +LHGG+KYR TGRGFVV
Sbjct: 97299 FRTALGDFIIMQLQLASVFFTFQLGTKAHYYGRTLLHGGSKYRPTGRGFVV 97147
>gb|AC157648.18| Medicago truncatula clone mth2-68d9, complete sequence
          Length = 84361

 Score =  136 bits (291), Expect = 2e-031
 Identities = 54/111 (48%), Positives = 73/111 (65%)
 Frame = +3 / +2

                                                                         
Query: 18    YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
             Y+FLYG++Y+ LSGV   I + ++I           +Q + Q+G+   +PM++   LE G
Sbjct: 76355 YVFLYGRLYMVLSGVEREIISSSNIHQSKALEQALASQSVVQLGLLLVLPMVMEIGLEKG 76534

                                                                
Query: 198   VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
               TA   FI MQ Q+ SVFFTF LGT+ HY+GR +LHGG+KYR TGRGFVV
Sbjct: 76535 FRTALGDFIIMQLQLASVFFTFQLGTKAHYYGRTLLHGGSKYRPTGRGFVV 76687
>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
          Length = 113632

 Score = 85.4 bits (180), Expect(2) = 2e-031
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = +3 / +1

                                                    
Query: 201  LTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAK 320
            L A V FITMQFQ+C+VFFTFSLGTRTHYFGR ILHGGA+
Sbjct: 8167 LQAVVNFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGAR 8286

 Score = 78.5 bits (165), Expect(2) = 2e-031
 Identities = 34/59 (57%), Positives = 39/59 (66%)
 Frame = +3 / +2

                                                                       
Query: 39   MYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESGVLTAFV 215
            +Y ALSGVGE I+ RA I           TQFLFQIG+FTAVPM+LGF+LE G L   V
Sbjct: 7781 LY*ALSGVGEIIEERAKITKNTALSAALNTQFLFQIGIFTAVPMVLGFVLEQGFLRVSV 7957

 Score = 75.3 bits (158), Expect(2) = 3e-021
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = -1 / -2

                                                                      
Query: 214  TKAVKTPDSRMKPRIMGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKARY 41
            T  +K P SR KP+ +GTAVN PIWKRN VF+AA +A F  I AL  I SPTP+ A Y
Sbjct: 7956 TLTLKKPCSRTKPKTIGTAVNIPIWKRNCVFKAALRAVFLVILALSSIISPTPESA*Y 7783

 Score = 54.2 bits (112), Expect(2) = 3e-021
 Identities = 25/43 (58%), Positives = 27/43 (62%)
 Frame = -1 / -3

                                                       
Query: 316  APPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDS 188
            APP  I RPK*WVLVP EKVK T    NCIV+  T A +   S
Sbjct: 8282 APP*RIVRPK*WVLVPKEKVKKTVQS*NCIVMKLTTACRQKKS 8154
>gb|AC158209.13| Medicago truncatula clone mth2-154h5, complete sequence
          Length = 93864

 Score =  135 bits (290), Expect = 2e-031
 Identities = 61/111 (54%), Positives = 71/111 (63%)
 Frame = +3 / -2

                                                                         
Query: 18    YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
             Y FLYGK+YL+LSGV  +I   A             +Q L QIG+   +PMI+   LE G
Sbjct: 56153 YAFLYGKLYLSLSGVEAAIVKFARRKGDDPLKAAMASQSLVQIGLLMTLPMIMEIGLERG 55974

                                                                
Query: 198   VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
               TA    I MQ Q+  VFFTFSLGT+ HYFGR +LHGGAKYRATGRGFVV
Sbjct: 55973 FRTALGDLIIMQLQLAPVFFTFSLGTKLHYFGRTLLHGGAKYRATGRGFVV 55821
>gb|BF004186.1|BF004186 EST432684 KV1 Medicago truncatula cDNA clone pKV1-14L2, mRNA
           sequence
          Length = 364

 Score =  134 bits (287), Expect = 6e-031
 Identities = 55/90 (61%), Positives = 65/90 (72%)
 Frame = +3 / +2

                                                                       
Query: 18  YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
           YIFLYG+ YLA SG+ E++  +A +            QFL QIGVFTAVPMI+GFILE G
Sbjct: 95  YIFLYGRAYLAFSGLDEAVSEKAKLLGNTALDAALNAQFLVQIGVFTAVPMIMGFILELG 274

                                         
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHY 287
           +L A   FITMQ Q+CSVFFTFSLGT+THY
Sbjct: 275 LLKAVFSFITMQLQLCSVFFTFSLGTKTHY 364
  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 431,987,473
Number of Sequences: 392609
Number of extensions: 6557755
Number of successful extensions: 154700
Number of sequences better than 1.0e-020: 18
length of database: 147,244,331
effective HSP length: 52
effective length of database: 126,828,663
effective search space used: 8878006410
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)