TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAE8g03.yg.2.1
         (360 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AC157648.18|  Medicago truncatula clone mth2-68d9, comple...   116   1e-029
gb|AC152887.20|  Medicago truncatula clone mth2-91j4, WORKIN...   116   1e-029

>gb|AC157648.18| Medicago truncatula clone mth2-68d9, complete sequence
          Length = 84361

 Score =  116 bits (248), Expect(2) = 1e-029
 Identities = 45/71 (63%), Positives = 57/71 (80%)
 Frame = -3 / +3

                                                                         
Query: 214   RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
             RYLFVRW L V NMY+I G+ GDTD+EE++SG HKT+I++GV  KGSE   R PGSY++D
Sbjct: 62886 RYLFVRWRLNVANMYVILGQTGDTDYEELISGTHKTIIMKGVVAKGSEEKHRGPGSYQRD 63065

                        
Query: 34    DVVPSETPLAA 2
             DVVP ++PL A
Sbjct: 63066 DVVPDKSPLVA 63098




 Score = 40.9 bits (83), Expect(2) = 1e-029
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = -3 / +2

                                   
Query: 358   CRNSTRLQVVPLLASRSQALR* 293
             CR ST +QV+PLLASR+QALR*
Sbjct: 62009 CRRSTYMQVIPLLASRAQALR* 62074



>gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKING DRAFT SEQUENCE, 2 ordered
              pieces
          Length = 116277

 Score =  116 bits (248), Expect(2) = 1e-029
 Identities = 45/71 (63%), Positives = 57/71 (80%)
 Frame = -3 / -2

                                                                          
Query: 214    RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
              RYLFVRW L V NMY+I G+ GDTD+EE++SG HKT+I++GV  KGSE   R PGSY++D
Sbjct: 110948 RYLFVRWRLNVANMYVILGQTGDTDYEELISGTHKTIIMKGVVAKGSEEKHRGPGSYQRD 110769

                         
Query: 34     DVVPSETPLAA 2
              DVVP ++PL A
Sbjct: 110768 DVVPDKSPLVA 110736




 Score = 40.9 bits (83), Expect(2) = 1e-029
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = -3 / -1

                                    
Query: 358    CRNSTRLQVVPLLASRSQALR* 293
              CR ST +QV+PLLASR+QALR*
Sbjct: 111825 CRRSTYMQVIPLLASRAQALR* 111760



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 368,012,602
Number of Sequences: 392609
Number of extensions: 5104228
Number of successful extensions: 109010
Number of sequences better than 1.0e-020: 3
length of database: 147,244,331
effective HSP length: 51
effective length of database: 127,221,272
effective search space used: 8651046496
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)