TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021176.2.1
(1318 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ846042.1|AJ846042 AJ846042 MtSC4 Medicago truncatula c... 122 3e-055
gb|AC149207.3| Medicago truncatula chromosome 2 BAC clone m... 157 1e-054
gb|AC159124.12| Medicago truncatula clone mth2-172h20, WORK... 157 2e-054
gb|AC124960.26| Medicago truncatula clone mth2-26j24, compl... 157 2e-054
gb|AC159125.9| Medicago truncatula clone mth2-189o22, WORKI... 157 2e-054
gb|AC139344.17| Medicago truncatula clone mth2-34b22, compl... 105 4e-052
gb|AC144405.28| Medicago truncatula clone mth2-16m18, WORKI... 105 2e-051
emb|CR331661.1| mte1-60L6FM1 BAC end, cultivar Jemalong A17... 105 3e-051
emb|CR511381.1| mth4-28I23FM3 BAC end, cultivar Jemalong A1... 134 1e-048
gb|CG929132.1|CG929132 MBEIX05TR mth2 Medicago truncatula g... 133 2e-048
emb|CR481626.1| mth2-145I19RM1 BAC end, cultivar Jemalong A... 135 6e-045
gb|CB891305.1|CB891305 EST648274 KV3 Medicago truncatula cD... 76 1e-042
gb|CG929270.1|CG929270 MBEBG04TF mth2 Medicago truncatula g... 114 2e-042
gb|CA921313.1|CA921313 EST639031 MTUS Medicago truncatula c... 122 6e-039
emb|CR511380.1| mth4-28I23FM1 BAC end, cultivar Jemalong A1... 137 4e-038
gb|CG942894.1|CG942894 MBEGW86TR mth2 Medicago truncatula g... 69 1e-034
gb|AW299027.1|AW299027 EST305701 KV2 Medicago truncatula cD... 69 2e-034
gb|AW329265.2|AW329265 N200485e rootphos(-) Medicago trunca... 122 2e-033
emb|CR349725.1| mte1-84M2RM1 BAC end, cultivar Jemalong A17... 85 5e-032
gb|AL366985.1|AL366985 MtBA11E01F1 MtBA Medicago truncatula... 90 2e-031
gb|AW328906.2|AW328906 N200098e rootphos(-) Medicago trunca... 122 5e-031
gb|AW328899.2|AW328899 N200091e rootphos(-) Medicago trunca... 122 5e-031
gb|BF004325.1|BF004325 EST432823 KV1 Medicago truncatula cD... 82 2e-030
gb|AW560371.1|AW560371 EST315419 DSIR Medicago truncatula c... 121 3e-026
emb|CR969622.1| mth4-23B4FM1 BAC end, cultivar Jemalong A17... 69 3e-025
gb|BE203251.1|BE203251 EST403273 KV1 Medicago truncatula cD... 69 6e-024
gb|AL370334.1|AL370334 MtBA37B07R1 MtBA Medicago truncatula... 69 8e-024
>gb|AJ846042.1|AJ846042 AJ846042 MtSC4 Medicago truncatula cDNA clone MtC402L23N1, mRNA
sequence
Length = 780
Score = 122 bits (261), Expect(3) = 3e-055
Identities = 50/115 (43%), Positives = 72/115 (62%)
Frame = +1 / -3
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
L V RTS NGV+V++ I N VP+T+E+SR+H Y + DDC AHLD+ FKF L+
Sbjct: 379 LRVERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLDVQFKFYGLS 200
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGS 1032
+ V GV+G+TY+ D+ N +MP +GG+ Y T SL +ADC ++ + S
Sbjct: 199 SKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTKSLVSADCLACIFSSAKDS 35
Score = 68.9 bits (144), Expect(3) = 3e-055
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +1 / -3
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
G RD+TWIQA+ VLFD H + A ++ WDD+VD ++L+ DG+ + + G + W S
Sbjct: 568 GRPRDYTWIQALGVLFDSHNFSIEATPSSIWDDEVDHLKLSYDGKDLVIPEGHLSTWQS 392
Score = 65.2 bits (136), Expect(3) = 3e-055
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +1 / -3
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
AC D RF+G DG FYFHGRR+ F ++SD +L INA FIG
Sbjct: 703 ACLDXRFVGADGIVFYFHGRRNGHFSLVSDTNLQINARFIG 581
>gb|AC149207.3| Medicago truncatula chromosome 2 BAC clone mte1-60l24, complete sequence
Length = 107210
Score = 157 bits (338), Expect(3) = 1e-054
Identities = 60/115 (52%), Positives = 85/115 (73%)
Frame = +1 / +1
Query: 685 ALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGAL 864
++S+ R ++ N ++V ++G F I A VPITEE+SR+H YG+T DDC AHLDL FKF +L
Sbjct: 101305 SVSIVRETSTNNIIVEVEGNFRITAKVVPITEEDSRIHNYGITKDDCFAHLDLGFKFLSL 101484
Query: 865 TADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
+ +V GV+GQTY+ +YV+R ++ A MP MGG Y TSSLF+ DC+VAR+ + G
Sbjct: 101485 SNEVSGVLGQTYKPNYVSRVNIGARMPIMGGAKEYETSSLFSPDCSVARFIGNTG 101649
Score = 98.2 bits (208), Expect(3) = 3e-036
Identities = 48/95 (50%), Positives = 61/95 (64%)
Frame = -3 / -1
Query: 1010 RATAQSAAKRLDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRC 831
RAT QS +LDV +PP++GI A RLT* YVWP TP TS + NLK +SR
Sbjct: 101630 RATEQSGENKLDVSYSFAPPIIGILAPMFTRLT*LGLYVWPNTPLTSLLKDKNLKPKSR* 101451
Query: 830 ARQSSAVTPYRCTLDSSSVMGTALALMVNLPSSET 726
A+QSS V P L+SSSV+GT LA+++ PS+ T
Sbjct: 101450 AKQSSLVIP*L*ILESSSVIGTTLAVILKFPSTST 101346
Score = 84.5 bits (178), Expect(3) = 1e-054
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
C DPRFIGGDG FYFHG++D +FC++SD +LHINAHFIG+
Sbjct: 100993 CQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGR 101115
Score = 64.3 bits (134), Expect(3) = 3e-036
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -3 / -1
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGS 366
LPMK A MWR SE+ QK S PWK*K +PSPPMKRGS
Sbjct: 101114 LPMK*AFMWRLLSETRQKLLSFLPWK*KVIPSPPMKRGS 100998
Score = 31.8 bits (63), Expect(3) = 1e-054
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1 / +1
Query: 1036 DRDDGVAMVSEIAGITCASGMGGQGVVCKK* 1128
++D G + + C SG+ G+GVVCK+*
Sbjct: 101653 NKDIGTMENLALPSLKCTSGIDGEGVVCKR* 101745
Score = 29.9 bits (59), Expect(3) = 3e-036
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = -3 / -1
Query: 728 TSTPLAALVRVTDSAGTAPDVHAASVPGRRRTGXXXXXXXXXXXXXSHAAVFLAPT*SSW 549
+++ + V V+ + T D H R G SH VFLAP S
Sbjct: 101357 STSTMMLFVEVSLTMDTLDDSHFVPSDSWRVMGSPSKERARRSTESSHVDVFLAPRKSW* 101178
Query: 548 PSKSTAMAWIHVKS 507
SK M HVKS
Sbjct: 101177 LSKRITMDCTHVKS 101136
>gb|AC159124.12| Medicago truncatula clone mth2-172h20, WORKING DRAFT SEQUENCE, 2
ordered pieces
Length = 117155
Score = 157 bits (338), Expect(3) = 2e-054
Identities = 60/115 (52%), Positives = 85/115 (73%)
Frame = +1 / -1
Query: 685 ALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGAL 864
++S+ R ++ N ++V ++G F I A VPITEE+SR+H YG+T DDC AHLDL FKF +L
Sbjct: 35198 SVSIVRETSTNNIIVEVEGNFRITAKVVPITEEDSRIHNYGITKDDCFAHLDLGFKFLSL 35019
Query: 865 TADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
+ +V GV+GQTY+ +YV+R ++ A MP MGG Y TSSLF+ DC+VAR+ + G
Sbjct: 35018 SNEVSGVLGQTYKPNYVSRVNIGARMPIMGGAKEYETSSLFSPDCSVARFIGNTG 34854
Score = 98.2 bits (208), Expect(3) = 3e-036
Identities = 48/95 (50%), Positives = 61/95 (64%)
Frame = -3 / +1
Query: 1010 RATAQSAAKRLDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRC 831
RAT QS +LDV +PP++GI A RLT* YVWP TP TS + NLK +SR
Sbjct: 34873 RATEQSGENKLDVSYSFAPPIIGILAPMFTRLT*LGLYVWPNTPLTSLLKDKNLKPKSR* 35052
Query: 830 ARQSSAVTPYRCTLDSSSVMGTALALMVNLPSSET 726
A+QSS V P L+SSSV+GT LA+++ PS+ T
Sbjct: 35053 AKQSSLVIP*L*ILESSSVIGTTLAVILKFPSTST 35157
Score = 84.5 bits (178), Expect(3) = 2e-054
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / -1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
C DPRFIGGDG FYFHG++D +FC++SD +LHINAHFIG+
Sbjct: 35510 CQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGR 35388
Score = 64.3 bits (134), Expect(3) = 3e-036
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -3 / +1
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGS 366
LPMK A MWR SE+ QK S PWK*K +PSPPMKRGS
Sbjct: 35389 LPMK*AFMWRLLSETRQKLLSFLPWK*KVIPSPPMKRGS 35505
Score = 31.8 bits (63), Expect(3) = 2e-054
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1 / -1
Query: 1036 DRDDGVAMVSEIAGITCASGMGGQGVVCKK* 1128
++D G + + C SG+ G+GVVCK+*
Sbjct: 34850 NKDIGTMENLALPSLKCTSGIDGEGVVCKR* 34758
Score = 29.9 bits (59), Expect(3) = 3e-036
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = -3 / +1
Query: 728 TSTPLAALVRVTDSAGTAPDVHAASVPGRRRTGXXXXXXXXXXXXXSHAAVFLAPT*SSW 549
+++ + V V+ + T D H R G SH VFLAP S
Sbjct: 35146 STSTMMLFVEVSLTMDTLDDSHFVPSDSWRVMGSPSKERARRSTESSHVDVFLAPRKSW* 35325
Query: 548 PSKSTAMAWIHVKS 507
SK M HVKS
Sbjct: 35326 LSKRITMDCTHVKS 35367
>gb|AC124960.26| Medicago truncatula clone mth2-26j24, complete sequence
Length = 125894
Score = 157 bits (338), Expect(3) = 2e-054
Identities = 60/115 (52%), Positives = 85/115 (73%)
Frame = +1 / +1
Query: 685 ALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGAL 864
++S+ R ++ N ++V ++G F I A VPITEE+SR+H YG+T DDC AHLDL FKF +L
Sbjct: 21586 SVSIVRETSTNNIIVEVEGNFRITAKVVPITEEDSRIHNYGITKDDCFAHLDLGFKFLSL 21765
Query: 865 TADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
+ +V GV+GQTY+ +YV+R ++ A MP MGG Y TSSLF+ DC+VAR+ + G
Sbjct: 21766 SNEVSGVLGQTYKPNYVSRVNIGARMPIMGGAKEYETSSLFSPDCSVARFIGNTG 21930
Score = 98.2 bits (208), Expect(3) = 3e-036
Identities = 48/95 (50%), Positives = 61/95 (64%)
Frame = -3 / -1
Query: 1010 RATAQSAAKRLDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRC 831
RAT QS +LDV +PP++GI A RLT* YVWP TP TS + NLK +SR
Sbjct: 21911 RATEQSGENKLDVSYSFAPPIIGILAPMFTRLT*LGLYVWPNTPLTSLLKDKNLKPKSR* 21732
Query: 830 ARQSSAVTPYRCTLDSSSVMGTALALMVNLPSSET 726
A+QSS V P L+SSSV+GT LA+++ PS+ T
Sbjct: 21731 AKQSSLVIP*L*ILESSSVIGTTLAVILKFPSTST 21627
Score = 84.5 bits (178), Expect(3) = 2e-054
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
C DPRFIGGDG FYFHG++D +FC++SD +LHINAHFIG+
Sbjct: 21274 CQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGR 21396
Score = 64.3 bits (134), Expect(3) = 3e-036
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -3 / -1
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGS 366
LPMK A MWR SE+ QK S PWK*K +PSPPMKRGS
Sbjct: 21395 LPMK*AFMWRLLSETRQKLLSFLPWK*KVIPSPPMKRGS 21279
Score = 31.8 bits (63), Expect(3) = 2e-054
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1 / +1
Query: 1036 DRDDGVAMVSEIAGITCASGMGGQGVVCKK* 1128
++D G + + C SG+ G+GVVCK+*
Sbjct: 21934 NKDIGTMENLALPSLKCTSGIDGEGVVCKR* 22026
Score = 29.9 bits (59), Expect(3) = 3e-036
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = -3 / -1
Query: 728 TSTPLAALVRVTDSAGTAPDVHAASVPGRRRTGXXXXXXXXXXXXXSHAAVFLAPT*SSW 549
+++ + V V+ + T D H R G SH VFLAP S
Sbjct: 21638 STSTMMLFVEVSLTMDTLDDSHFVPSDSWRVMGSPSKERARRSTESSHVDVFLAPRKSW* 21459
Query: 548 PSKSTAMAWIHVKS 507
SK M HVKS
Sbjct: 21458 LSKRITMDCTHVKS 21417
>gb|AC159125.9| Medicago truncatula clone mth2-189o22, WORKING DRAFT SEQUENCE, 4
ordered pieces
Length = 131459
Score = 157 bits (338), Expect(3) = 2e-054
Identities = 60/115 (52%), Positives = 85/115 (73%)
Frame = +1 / +2
Query: 685 ALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGAL 864
++S+ R ++ N ++V ++G F I A VPITEE+SR+H YG+T DDC AHLDL FKF +L
Sbjct: 10052 SVSIVRETSTNNIIVEVEGNFRITAKVVPITEEDSRIHNYGITKDDCFAHLDLGFKFLSL 10231
Query: 865 TADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
+ +V GV+GQTY+ +YV+R ++ A MP MGG Y TSSLF+ DC+VAR+ + G
Sbjct: 10232 SNEVSGVLGQTYKPNYVSRVNIGARMPIMGGAKEYETSSLFSPDCSVARFIGNTG 10396
Score = 98.2 bits (208), Expect(3) = 3e-036
Identities = 48/95 (50%), Positives = 61/95 (64%)
Frame = -3 / -3
Query: 1010 RATAQSAAKRLDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRC 831
RAT QS +LDV +PP++GI A RLT* YVWP TP TS + NLK +SR
Sbjct: 10377 RATEQSGENKLDVSYSFAPPIIGILAPMFTRLT*LGLYVWPNTPLTSLLKDKNLKPKSR* 10198
Query: 830 ARQSSAVTPYRCTLDSSSVMGTALALMVNLPSSET 726
A+QSS V P L+SSSV+GT LA+++ PS+ T
Sbjct: 10197 AKQSSLVIP*L*ILESSSVIGTTLAVILKFPSTST 10093
Score = 84.5 bits (178), Expect(3) = 2e-054
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +2
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
C DPRFIGGDG FYFHG++D +FC++SD +LHINAHFIG+
Sbjct: 9740 CQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGR 9862
Score = 64.3 bits (134), Expect(3) = 3e-036
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -3 / -3
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGS 366
LPMK A MWR SE+ QK S PWK*K +PSPPMKRGS
Sbjct: 9861 LPMK*AFMWRLLSETRQKLLSFLPWK*KVIPSPPMKRGS 9745
Score = 31.8 bits (63), Expect(3) = 2e-054
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1 / +2
Query: 1036 DRDDGVAMVSEIAGITCASGMGGQGVVCKK* 1128
++D G + + C SG+ G+GVVCK+*
Sbjct: 10400 NKDIGTMENLALPSLKCTSGIDGEGVVCKR* 10492
Score = 29.9 bits (59), Expect(3) = 3e-036
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = -3 / -3
Query: 728 TSTPLAALVRVTDSAGTAPDVHAASVPGRRRTGXXXXXXXXXXXXXSHAAVFLAPT*SSW 549
+++ + V V+ + T D H R G SH VFLAP S
Sbjct: 10104 STSTMMLFVEVSLTMDTLDDSHFVPSDSWRVMGSPSKERARRSTESSHVDVFLAPRKSW* 9925
Query: 548 PSKSTAMAWIHVKS 507
SK M HVKS
Sbjct: 9924 LSKRITMDCTHVKS 9883
>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence
Length = 129728
Score = 105 bits (225), Expect(3) = 2e-051
Identities = 46/116 (39%), Positives = 65/116 (56%)
Frame = +1 / +1
Query: 667 TSGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLA 846
T+G + V RT AN V V++ G + PI E+E++ H Y + +DD AHL+
Sbjct: 17629 TNGDEREVVVERTDDANSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQ 17808
Query: 847 FKFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARY 1014
FKF T + GV+GQTYR YV+ +MP MGG+ Y T SLF+ C + R+
Sbjct: 17809 FKFKNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTCKLCRF 17976
Score = 105 bits (224), Expect(3) = 4e-052
Identities = 46/116 (39%), Positives = 65/116 (56%)
Frame = +1 / +3
Query: 667 TSGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLA 846
+SG + V RT AN V V++ G + PI E+E++ H Y + +DD AHL+
Sbjct: 34848 SSGNQREVIVERTDDANSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQ 35027
Query: 847 FKFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARY 1014
FKF T + GV+GQTYR YV+ +MP MGG+ Y T SLF+ C + R+
Sbjct: 35028 FKFKNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTCKLCRF 35195
Score = 71.2 bits (149), Expect(3) = 4e-052
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD D INAHFIG
Sbjct: 34542 CYDPRFVGGDGVMFYFHGAKGGNFAIVSDDDFQINAHFIG 34661
Score = 69.3 bits (145), Expect(3) = 4e-052
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +1 / +3
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
G +RD+TW+QA++V+FD H L + A + W+D VD + + DGE V + DA W S
Sbjct: 34674 GRTRDYTWVQALSVMFDTHTLVIAANRVTQWNDKVDSLTVKWDGELVTIPSDGDAEWKS 34850
Score = 69.3 bits (145), Expect(3) = 2e-051
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD + INAHFIG
Sbjct: 17323 CYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIG 17442
Score = 68.0 bits (142), Expect(3) = 2e-051
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1 / +1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RD+TW+QA++++FD H L + A + W+D+VD + + DGE V + DA W
Sbjct: 17455 GRTRDYTWVQALSLMFDTHTLVIAANRVTQWNDNVDSLTVKWDGESVIIPTDDDAEW 17625
>gb|AC144405.28| Medicago truncatula clone mth2-16m18, WORKING DRAFT SEQUENCE, 7
unordered pieces
Length = 109873
Score = 105 bits (225), Expect(3) = 2e-051
Identities = 46/116 (39%), Positives = 65/116 (56%)
Frame = +1 / -1
Query: 667 TSGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLA 846
T+G + V RT AN V V++ G + PI E+E++ H Y + +DD AHL+
Sbjct: 82252 TNGDEREVVVERTDDANSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQ 82073
Query: 847 FKFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARY 1014
FKF T + GV+GQTYR YV+ +MP MGG+ Y T SLF+ C + R+
Sbjct: 82072 FKFKNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTCKLCRF 81905
Score = 69.3 bits (145), Expect(3) = 2e-051
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / -1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD + INAHFIG
Sbjct: 82558 CYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIG 82439
Score = 68.0 bits (142), Expect(3) = 2e-051
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RD+TW+QA++++FD H L + A + W+D+VD + + DGE V + DA W
Sbjct: 82426 GRTRDYTWVQALSLMFDTHTLVIAANRVTQWNDNVDSLTVKWDGESVIIPTDDDAEW 82256
>emb|CR331661.1| mte1-60L6FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 826
Score = 105 bits (225), Expect(3) = 3e-051
Identities = 46/116 (39%), Positives = 65/116 (56%)
Frame = +1 / +2
Query: 667 TSGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLA 846
T+G + V RT AN V V++ G + PI E+E++ H Y + +DD AHL+
Sbjct: 398 TNGDEREVVVERTDDANSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQ 577
Query: 847 FKFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARY 1014
FKF T + GV+GQTYR YV+ +MP MGG+ Y T SLF+ C + R+
Sbjct: 578 FKFKNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTCKLCRF 745
Score = 69.3 bits (145), Expect(3) = 3e-051
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / +2
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD + INAHFIG
Sbjct: 92 CYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIG 211
Score = 68.0 bits (142), Expect(3) = 3e-051
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1 / +2
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RD+TW+QA++++FD H L + A + W+D+VD + + DGE V + DA W
Sbjct: 224 GRTRDYTWVQALSLMFDTHTLVIAANRVTQWNDNVDSLTVKWDGESVIIPTDDDAEW 394
>emb|CR511381.1| mth4-28I23FM3 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 622
Score = 134 bits (287), Expect(2) = 1e-048
Identities = 51/98 (52%), Positives = 71/98 (72%)
Frame = +1 / -1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+S R ++ N ++V ++G F I A VPITEE+SR+H YG+T DDC AHLDL FKF +L+
Sbjct: 295 VSFVRETSTNNIIVEVEGNFRITAKVVPITEEDSRIHNYGITKDDCFAHLDLGFKFLSLS 116
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSS 981
+V+GV+GQTY+ +YV+R ++ A P MGG Y TSS
Sbjct: 115 NEVNGVLGQTYKPNYVSRVNIGAKRPIMGGGKEYETSS 2
Score = 84.5 bits (178), Expect(2) = 1e-048
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / -1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
C DPRFIGGDG FYFHG++D +FC++SD +LHINAHFIG+
Sbjct: 610 CQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGR 488
Score = 81.3 bits (171), Expect(3) = 1e-032
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -3 / +3
Query: 980 LDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPY 801
L+V PP++G+ A RLT* YVWP TP TS + NL +SR A+QSS V P
Sbjct: 3 LEVSYSFPPPIIGLFAPMFTRLT*LGLYVWPNTPFTSLLKDKNLNPKSR*AKQSSLVIP* 182
Query: 800 RCTLDSSSVMGTALALMVNLPSSET 726
L+SSSV+GT LA+++ PS+ T
Sbjct: 183 L*ILESSSVIGTTLAVILKFPSTST 257
Score = 59.3 bits (123), Expect(3) = 1e-032
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -3 / +3
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGS 366
LPMK ALMWR SE+ QK S P K*K +PSPPMKRGS
Sbjct: 489 LPMK*ALMWRLLSETRQKLLSFLP*K*KVIPSPPMKRGS 605
Score = 40.0 bits (81), Expect(3) = 1e-032
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -2 / +2
Query: 642 EAHGLAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGHAV 493
E+ GL V+GE V ++P G +LV V+E+ +GLDP EV H +
Sbjct: 332 ESDGLTVKGEGKTVYRIIPC*CFLGTKEKLVIVKENNNGLDPCEVSFHVL 481
>gb|CG929132.1|CG929132 MBEIX05TR mth2 Medicago truncatula genomic clone 65B10, DNA
sequence
Length = 939
Score = 133 bits (284), Expect(2) = 2e-048
Identities = 51/96 (53%), Positives = 69/96 (71%)
Frame = +1 / -2
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+S R ++ N ++V ++G F I A VPITEE+SRVH YG+T DDC AHLDL FKF +L+
Sbjct: 290 VSFVRETSTNNIIVEVEGNFRITAKVVPITEEDSRVHNYGITKDDCFAHLDLGFKFLSLS 111
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTT 975
+V GV+GQTY+ +YV+R ++ A MP MGG Y T
Sbjct: 110 NEVSGVLGQTYKPNYVSRVNIGAKMPIMGGGKEYET 3
Score = 85.4 bits (180), Expect(2) = 2e-048
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +1 / -2
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
C DPRFIGGDG FYFHG++D +FC++SD++LHINAHFIG+
Sbjct: 605 CQDPRFIGGDGITFYFHGKKDNNFCLVSDKNLHINAHFIGR 483
Score = 84.9 bits (179), Expect(3) = 9e-035
Identities = 40/77 (51%), Positives = 51/77 (66%)
Frame = -3 / +1
Query: 956 PPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPYRCTLDSSS 777
PP++GI A RLT* YVWP TP TS + NL +SR A+QSS V P TL+SSS
Sbjct: 22 PPIIGIFAPMFTRLT*LGLYVWPNTPLTSLLKDKNLNPKSR*AKQSSLVIP*L*TLESSS 201
Query: 776 VMGTALALMVNLPSSET 726
V+GT LA+++ PS+ T
Sbjct: 202 VIGTTLAVILKFPSTST 252
Score = 60.2 bits (125), Expect(3) = 9e-035
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -3 / +1
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGS 366
LPMK ALM R SE+ QK S PWK*K +PSPPMKRGS
Sbjct: 484 LPMK*ALMCRFLSETRQKLLSFLPWK*KVIPSPPMKRGS 600
Score = 42.3 bits (86), Expect(3) = 9e-035
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -2 / +3
Query: 642 EAHGLAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGHAV 493
E G +V+ + A+ V+P G G ELV V+E+ +GLDP EV H +
Sbjct: 327 EGDGFSVKRDGKAIHRVIPCGCFLGTKEELVIVKENNNGLDPCEVSFHVL 476
>emb|CR481626.1| mth2-145I19RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 622
Score = 135 bits (289), Expect(3) = 6e-045
Identities = 52/98 (53%), Positives = 71/98 (72%)
Frame = +1 / -1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+S R ++ N ++V ++G F I A VPITEE+SRVH YG+T DDC AHLDL FKF +L+
Sbjct: 295 VSFVRETSTNNIIVEVEGNFRITAKVVPITEEDSRVHNYGITKDDCFAHLDLGFKFLSLS 116
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSS 981
+V GV+GQTY+ +YV+R ++ A MP MGG Y T+S
Sbjct: 115 NEVSGVLGQTYKPNYVSRVNIGAKMPIMGGGKEYETTS 2
Score = 84.9 bits (179), Expect(4) = 3e-031
Identities = 40/77 (51%), Positives = 51/77 (66%)
Frame = -3 / +3
Query: 956 PPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPYRCTLDSSS 777
PP++GI A RLT* YVWP TP TS + NL +SR A+QSS V P TL+SSS
Sbjct: 27 PPIIGIFAPMFTRLT*LGLYVWPNTPLTSLLKDKNLNPKSR*AKQSSLVIP*L*TLESSS 206
Query: 776 VMGTALALMVNLPSSET 726
V+GT LA+++ PS+ T
Sbjct: 207 VIGTTLAVILKFPSTST 257
Score = 59.7 bits (124), Expect(3) = 6e-045
Identities = 19/28 (67%), Positives = 27/28 (96%)
Frame = +1 / -1
Query: 400 FYFHGRRDADFCVLSDRDLHINAHFIGK 483
FYFHG++D +FC++SD++LHINAHFIG+
Sbjct: 571 FYFHGKKDNNFCLVSDKNLHINAHFIGR 488
Score = 42.3 bits (86), Expect(4) = 3e-031
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -2 / +2
Query: 642 EAHGLAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGHAV 493
E G +V+ + A+ V+P G G ELV V+E+ +GLDP EV H +
Sbjct: 332 EGDGFSVKRDGKAIHRVIPCGCFLGTKEELVIVKENNNGLDPCEVSFHVL 481
Score = 36.8 bits (74), Expect(4) = 3e-031
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -3 / +3
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KA 396
LPMK ALM R SE+ QK S PWK*K+
Sbjct: 489 LPMK*ALMCRFLSETRQKLLSFLPWK*KS 575
Score = 31.3 bits (62), Expect(3) = 6e-045
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -3
Query: 361 CGDPRFIGGDGNAF 402
C DPRFIGGDG F
Sbjct: 611 CQDPRFIGGDGITF 570
Score = 29.0 bits (57), Expect(4) = 3e-031
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 401 KALPSPPMKRGS 366
K +PSPPMKRGS
Sbjct: 571 KVIPSPPMKRGS 606
>gb|CB891305.1|CB891305 EST648274 KV3 Medicago truncatula cDNA clone KV3-49F18, mRNA
sequence
Length = 775
Score = 76.2 bits (160), Expect(3) = 1e-042
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = +1 / +1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
L V RTS NGV+V++ I N VP+T+E+SR+H Y + DDC AHLD+ FKF L+
Sbjct: 538 LRVERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLDVQFKFYGLS 717
Query: 868 ADV 876
+ V
Sbjct: 718 SKV 726
Score = 68.9 bits (144), Expect(3) = 1e-042
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +1 / +1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
G RD+TWIQA+ VLFD H + A ++ WDD+VD ++L+ DG+ + + G + W S
Sbjct: 349 GRPRDYTWIQALGVLFDSHNFSIEATPSSIWDDEVDHLKLSYDGKDLVIPEGHLSTWQS 525
Score = 68.9 bits (144), Expect(3) = 1e-042
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1 / +1
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
AC DPRF+G DG FYFHGRR+ F ++SD +L INA FIG
Sbjct: 214 ACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIG 336
>gb|CG929270.1|CG929270 MBEBG04TF mth2 Medicago truncatula genomic clone 18B7, DNA sequence
Length = 812
Score = 114 bits (243), Expect(2) = 2e-042
Identities = 41/82 (50%), Positives = 63/82 (76%)
Frame = +1 / -2
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+S R ++ N ++V ++G F I A VPITEE+SR+H YG+T DDC AHLDL FKF +++
Sbjct: 247 VSFVRETSTNNIIVEVEGNFRITAKVVPITEEDSRIHNYGITKDDCFAHLDLGFKFLSVS 68
Query: 868 ADVHGVVGQTYRSDYVNRFDVK 933
+V+GV+GQTY+ +YV+R +++
Sbjct: 67 NEVNGVLGQTYKPNYVSRVNIE 2
Score = 84.5 bits (178), Expect(2) = 2e-042
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / -2
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
C DPRFIGGDG FYFHG++D +FC++SD +LHINAHFIG+
Sbjct: 562 CQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGR 440
Score = 71.6 bits (150), Expect(3) = 7e-030
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = -3 / +3
Query: 920 RLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPYRCTLDSSSVMGTALALMVNL 741
RLT* YVWP TP TS ++ NL +SR A+QSS V P L+SSSV+GT LA+++
Sbjct: 15 RLT*LGLYVWPNTPFTSLLTDKNLNPKSR*AKQSSLVIP*L*ILESSSVIGTTLAVILKF 194
Query: 740 PSSET 726
PS+ T
Sbjct: 195 PSTST 209
Score = 59.3 bits (123), Expect(3) = 7e-030
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -3 / +3
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGS 366
LPMK ALMWR SE+ QK S P K*K +PSPPMKRGS
Sbjct: 441 LPMK*ALMWRLLSETRQKLLSFLP*K*KVIPSPPMKRGS 557
Score = 40.0 bits (81), Expect(3) = 7e-030
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -2 / +2
Query: 642 EAHGLAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGHAV 493
E+ GL V+GE V ++P G +LV V+E+ +GLDP EV H +
Sbjct: 284 ESDGLTVKGEGKTVYRIIPC*CFLGTKEKLVIVKENNNGLDPCEVSFHVL 433
>gb|CA921313.1|CA921313 EST639031 MTUS Medicago truncatula cDNA clone MTUS-38H1, mRNA
sequence
Length = 765
Score = 122 bits (261), Expect(2) = 6e-039
Identities = 50/115 (43%), Positives = 72/115 (62%)
Frame = +1 / -2
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
L V RTS NGV+V++ I N VP+T+E+SR+H Y + DDC AHLD+ FKF L+
Sbjct: 584 LRVERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLDVQFKFYGLS 405
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGS 1032
+ V GV+G+TY+ D+ N +MP +GG+ Y T SL +ADC ++ + S
Sbjct: 404 SKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTKSLVSADCLACIFSSAKDS 240
Score = 61.1 bits (127), Expect(2) = 6e-039
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +1 / -2
Query: 511 FTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
+TWIQA+ VLFD H + A ++ WDD+VD ++L+ DG+ + + G + W S
Sbjct: 758 YTWIQALGVLFDSHNFSMKATPSSIWDDEVDHLKLSYDGKDLVIPEGHLSTWQS 597
>emb|CR511380.1| mth4-28I23FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 559
Score = 137 bits (293), Expect(2) = 4e-038
Identities = 52/98 (53%), Positives = 72/98 (73%)
Frame = +1 / -1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+S R ++ N ++V ++G F I A VPITEE+SR+H YG+T DDC AHLDL FKF +L+
Sbjct: 295 VSFVRETSTNNIIVEVEGNFRITAKVVPITEEDSRIHNYGITKDDCFAHLDLGFKFLSLS 116
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSS 981
+V+GV+GQTY+ +YV+R ++ A MP MGG Y TSS
Sbjct: 115 NEVNGVLGQTYKPNYVSRVNIGAKMPIMGGGKEYETSS 2
Score = 82.2 bits (173), Expect(3) = 9e-025
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = -3 / +3
Query: 980 LDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPY 801
L+V PP++GI A RLT* YVWP TP TS + NL +SR A+QSS V P
Sbjct: 3 LEVSYSFPPPIIGIFAPMFTRLT*LGLYVWPNTPFTSLLKDKNLNPKSR*AKQSSLVIP* 182
Query: 800 RCTLDSSSVMGTALALMVNLPSSET 726
L+SSSV+GT LA+++ PS+ T
Sbjct: 183 L*ILESSSVIGTTLAVILKFPSTST 257
Score = 46.4 bits (95), Expect(2) = 4e-038
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = +1 / -1
Query: 412 GRRDADFCVLSDRDLHINAHFIGK 483
G++D +FC++SD +LHINAHFIG+
Sbjct: 559 GKKDNNFCLVSDNNLHINAHFIGR 488
Score = 40.0 bits (81), Expect(3) = 9e-025
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -2 / +2
Query: 642 EAHGLAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGHAV 493
E+ GL V+GE V ++P G +LV V+E+ +GLDP EV H +
Sbjct: 332 ESDGLTVKGEGKTVYRIIPC*CFLGTKEKLVIVKENNNGLDPCEVSFHVL 481
Score = 31.3 bits (62), Expect(3) = 9e-025
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3 / +3
Query: 482 LPMKCALMWRSRSESTQKSAS 420
LPMK ALMWR SE+ QK S
Sbjct: 489 LPMK*ALMWRLLSETRQKLLS 551
>gb|CG942894.1|CG942894 MBEGW86TR mth2 Medicago truncatula genomic clone 53P3, DNA sequence
Length = 762
Score = 69.3 bits (145), Expect(3) = 1e-034
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD + INAHFIG
Sbjct: 274 CYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIG 393
Score = 68.0 bits (142), Expect(3) = 1e-034
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1 / +1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RD+TW+QA++++FD H L + A + W+D+VD + + DGE V + DA W
Sbjct: 406 GRTRDYTWVQALSLMFDTHTLVIAANRVTQWNDNVDSLTVKWDGESVIIPTDDDAEW 576
Score = 49.6 bits (102), Expect(3) = 1e-034
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 667 TSGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLA 846
T+G + V RT AN V V++ G + PI E+E++ H Y + +DD AHL+
Sbjct: 580 TNGDEREVVVERTDDANSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQ 759
Query: 847 F 849
F
Sbjct: 760 F 762
>gb|AW299027.1|AW299027 EST305701 KV2 Medicago truncatula cDNA clone KV2-11C14, mRNA
sequence
Length = 671
Score = 68.9 bits (144), Expect(3) = 2e-034
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +1 / +1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
G RD+TWIQA+ VLFD H + A ++ WDD+VD ++L+ DG+ + + G + W S
Sbjct: 349 GRPRDYTWIQALGVLFDSHNFSIEATPSSIWDDEVDHLKLSYDGKDLVIPEGHLSTWQS 525
Score = 68.9 bits (144), Expect(3) = 2e-034
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1 / +1
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
AC DPRF+G DG FYFHGRR+ F ++SD +L INA FIG
Sbjct: 214 ACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIG 336
Score = 48.7 bits (100), Expect(3) = 2e-034
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1 / +1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTAD 819
L V RTS NGV+V++ I N VP+T+E+SR+H Y + D
Sbjct: 538 LRVERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPDD 669
>gb|AW329265.2|AW329265 N200485e rootphos(-) Medicago truncatula cDNA clone MHRP-18B5, mRNA
sequence
Length = 645
Score = 122 bits (261), Expect(2) = 2e-033
Identities = 50/115 (43%), Positives = 72/115 (62%)
Frame = +1 / +3
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
L V RTS NGV+V++ I N VP+T+E+SR+H Y + DDC AHLD+ FKF L+
Sbjct: 153 LRVERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLDVQFKFYGLS 332
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGS 1032
+ V GV+G+TY+ D+ N +MP +GG+ Y T SL +ADC ++ + S
Sbjct: 333 SKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTKSLVSADCLACIFSSAKDS 497
Score = 42.8 bits (87), Expect(2) = 2e-033
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1 / +3
Query: 541 FDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
FD H + A ++ WDD+VD ++L+ DG+ + + G + W S
Sbjct: 9 FDSHNFSIEATPSSIWDDEVDHLKLSYDGKDLVIPEGHLSTWQS 140
>emb|CR349725.1| mte1-84M2RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 431
Score = 85.4 bits (180), Expect(3) = 5e-032
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
C DPRFIGGDG FYFHG++D +FC++SD++LHINAHFIG+
Sbjct: 154 CQDPRFIGGDGITFYFHGKKDNNFCLVSDKNLHINAHFIGR 276
Score = 55.6 bits (115), Expect(3) = 5e-032
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +1 / +1
Query: 493 DGMSRDFTWIQAIAVLFDGHELYVGARKTA 582
+ M RDFTW+Q+I +LFD H+L++GA+KTA
Sbjct: 283 ENMKRDFTWVQSIVILFDNHQLFLGAQKTA 372
Score = 37.3 bits (75), Expect(3) = 5e-032
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 571 RKTAAWDDDVDRMELTLDGEPV 636
RK WDD VDR+ ++ DGEP+
Sbjct: 362 RKQPHWDDSVDRLAISFDGEPI 427
>gb|AL366985.1|AL366985 MtBA11E01F1 MtBA Medicago truncatula cDNA clone MtBA11E01 T3, mRNA
sequence
Length = 426
Score = 90.4 bits (191), Expect(2) = 2e-031
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +1 / +3
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
L V RTS NGV+V++ I N VP+T+E+SR+H Y + DDC AHLD+ F F L+
Sbjct: 198 LRVERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLDVQFXFYGLS 377
Query: 868 ADVHGVVGQTYRSDY 912
+ V GV+G+TY D+
Sbjct: 378 SKVEGVLGRTYXPDF 422
Score = 67.5 bits (141), Expect(2) = 2e-031
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +1 / +3
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
G RD+TWIQA+ VLFD H + A ++ WDD++D ++L+ DG+ + + G + W S
Sbjct: 9 GRPRDYTWIQALGVLFDSHNFSIEATPSSIWDDELDHLKLSYDGKDLVIPEGHLSTWQS 185
>gb|AW328906.2|AW328906 N200098e rootphos(-) Medicago truncatula cDNA clone MHRP-14A10, mRNA
sequence
Length = 571
Score = 122 bits (261), Expect(2) = 5e-031
Identities = 50/115 (43%), Positives = 72/115 (62%)
Frame = +1 / +1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
L V RTS NGV+V++ I N VP+T+E+SR+H Y + DDC AHLD+ FKF L+
Sbjct: 151 LRVERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLDVQFKFYGLS 330
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGS 1032
+ V GV+G+TY+ D+ N +MP +GG+ Y T SL +ADC ++ + S
Sbjct: 331 SKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTKSLVSADCLACIFSSAKDS 495
Score = 34.5 bits (69), Expect(2) = 5e-031
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 562 VGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
+ A ++ WDD+VD ++L+ DG+ + + G + W S
Sbjct: 28 IEATPSSIWDDEVDHLKLSYDGKDLVIPEGHLSTWQS 138
>gb|AW328899.2|AW328899 N200091e rootphos(-) Medicago truncatula cDNA clone MHRP-14A2, mRNA
sequence
Length = 520
Score = 122 bits (261), Expect(2) = 5e-031
Identities = 50/115 (43%), Positives = 72/115 (62%)
Frame = +1 / +2
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
L V RTS NGV+V++ I N VP+T+E+SR+H Y + DDC AHLD+ FKF L+
Sbjct: 131 LRVERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLDVQFKFYGLS 310
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGS 1032
+ V GV+G+TY+ D+ N +MP +GG+ Y T SL +ADC ++ + S
Sbjct: 311 SKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTKSLVSADCLACIFSSAKDS 475
Score = 34.5 bits (69), Expect(2) = 5e-031
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1 / +2
Query: 562 VGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
+ A ++ WDD+VD ++L+ DG+ + + G + W S
Sbjct: 8 IEATPSSIWDDEVDHLKLSYDGKDLVIPEGHLSTWQS 118
>gb|BF004325.1|BF004325 EST432823 KV1 Medicago truncatula cDNA clone pKV1-17G2, mRNA
sequence
Length = 357
Score = 81.7 bits (172), Expect(2) = 2e-030
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +1 / +1
Query: 514 TWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAV 681
TW+Q+I +L D H+L++GA+KTA WDD VDR+ ++ DGEP+ L A W S V
Sbjct: 1 TWVQSIVILLDNHQLFLGAQKTATWDDSVDRLAISFDGEPITLHESEGAKWESSGV 168
Score = 73.0 bits (153), Expect(2) = 2e-030
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1 / +1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLA 846
+S R ++ N ++ ++G I A VPITEE SRVH YG+T DDC AHLDLA
Sbjct: 166 VSFGRETSTNNIIAEVEGNCKITAKGVPITEEHSRVHNYGITKDDCCAHLDLA 324
>gb|AW560371.1|AW560371 EST315419 DSIR Medicago truncatula cDNA clone pDSIR-26N2, mRNA
sequence
Length = 628
Score = 121 bits (258), Expect = 3e-026
Identities = 49/113 (43%), Positives = 71/113 (62%)
Frame = +1 / -3
Query: 694 VTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTAD 873
V RTS NGV+V++ I N VP+T+E+SR+H Y + DDC AHLD+ FKF L++
Sbjct: 623 VERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLDVQFKFYGLSSK 444
Query: 874 VHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGS 1032
V GV+G+TY+ D+ N +MP +GG+ Y T SL +ADC ++ + S
Sbjct: 443 VEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTKSLVSADCLACIFSSAKDS 285
>emb|CR969622.1| mth4-23B4FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 643
Score = 69.3 bits (145), Expect(2) = 3e-025
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD + INAHFIG
Sbjct: 274 CYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIG 393
Score = 68.0 bits (142), Expect(2) = 3e-025
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1 / +1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RD+TW+QA++++FD H L + A + W+D+VD + + DGE V + DA W
Sbjct: 406 GRTRDYTWVQALSLMFDTHTLVIAANRVTQWNDNVDSLTVKWDGESVIIPTDDDAEW 576
>gb|BE203251.1|BE203251 EST403273 KV1 Medicago truncatula cDNA clone pKV1-4P2, mRNA
sequence
Length = 491
Score = 68.9 bits (144), Expect(2) = 6e-024
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1 / +1
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
AC DPRF+G DG FYFHGRR+ F ++SD +L INA FIG
Sbjct: 214 ACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIG 336
Score = 64.3 bits (134), Expect(2) = 6e-024
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +1 / +1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGE 630
G RD+TWIQA+ VLFD H + A ++ WDD+VD ++L+ DG+
Sbjct: 349 GRPRDYTWIQALGVLFDSHNFSIEATPSSIWDDEVDHLKLSYDGK 483
>gb|AL370334.1|AL370334 MtBA37B07R1 MtBA Medicago truncatula cDNA clone MtBA37B07 T7, mRNA
sequence
Length = 550
Score = 68.9 bits (144), Expect(2) = 8e-024
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1 / -3
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
AC DPRF+G DG FYFHGRR+ F ++SD +L INA FIG
Sbjct: 269 ACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIG 147
Score = 63.8 bits (133), Expect(2) = 8e-024
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +1 / -3
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDG 627
G RD+TWIQA+ VLFD H + A ++ WDD+VD ++L+ DG
Sbjct: 134 GRPRDYTWIQALGVLFDSHNFSIEATPSSIWDDEVDHLKLSYDG 3
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 821,683,025
Number of Sequences: 392609
Number of extensions: 8977276
Number of successful extensions: 49162
Number of sequences better than 1.0e-020: 32
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 47848642714
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)