TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5352090.2.1
(915 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF651193.1|BF651193 NF102H07EC1F1062 Elicited cell cultu... 132 1e-049
gb|BG645083.1|BG645083 EST506702 KV3 Medicago truncatula cD... 92 7e-049
gb|AW774787.1|AW774787 EST333938 KV3 Medicago truncatula cD... 92 7e-049
gb|CX530825.1|CX530825 s13dNF33F09MJ076_247665 Methyl Jasmo... 92 7e-049
gb|AW736264.1|AW736264 EST332326 KV3 Medicago truncatula cD... 92 2e-046
gb|AW560790.1|AW560790 EST315838 DSIR Medicago truncatula c... 127 2e-045
gb|BF003686.1|BF003686 EST432184 KV1 Medicago truncatula cD... 116 9e-045
gb|AW686035.1|AW686035 NF032G08NR1F1000 Nodulated root Medi... 92 9e-041
gb|AW685481.1|AW685481 NF030D05NR1F1000 Nodulated root Medi... 92 3e-038
gb|BF637128.1|BF637128 NF072E07LF1F1052 Developing leaf Med... 87 4e-036
gb|BE202678.1|BE202678 EST402700 KV1 Medicago truncatula cD... 67 7e-028
gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone m... 80 1e-027
gb|BG453405.1|BG453405 NF090G10LF1F1081 Developing leaf Med... 68 2e-027
gb|DW019329.1|DW019329 EST1228290 MTY Medicago truncatula c... 66 2e-027
gb|BG647218.1|BG647218 EST508837 HOGA Medicago truncatula c... 66 2e-027
gb|BF641878.1|BF641878 NF051B03IN1F1028 Insect herbivory Me... 66 2e-027
gb|BI266414.1|BI266414 NF103H04IN1F1044 Insect herbivory Me... 66 2e-027
gb|BF645185.1|BF645185 NF037G12EC1F1099 Elicited cell cultu... 66 2e-027
gb|AW776924.1|AW776924 EST335989 DSIL Medicago truncatula c... 66 2e-027
gb|BI309299.1|BI309299 EST530709 GPOD Medicago truncatula c... 66 2e-027
gb|CX529905.1|CX529905 s13dNF55E12MJ088_245850 Methyl Jasmo... 66 2e-027
gb|DW016087.1|DW016087 EST1225048 MTY Medicago truncatula c... 66 2e-027
gb|CB892496.1|CB892496 EST649465 KV3 Medicago truncatula cD... 66 2e-027
gb|BF003952.1|BF003952 EST432450 KV1 Medicago truncatula cD... 66 2e-027
gb|BE202685.1|BE202685 EST402707 KV1 Medicago truncatula cD... 66 5e-026
gb|BG453105.1|BG453105 NF090G12LF1F1097 Developing leaf Med... 57 6e-025
gb|BG453939.1|BG453939 NF096C06LF1F1039 Developing leaf Med... 57 6e-025
gb|BG450990.1|BG450990 NF097F03DT1F1029 Drought Medicago tr... 57 6e-025
gb|AW684291.1|AW684291 NF015B02NR1F1000 Nodulated root Medi... 62 6e-025
gb|BF003246.1|BF003246 EST431674 KV1 Medicago truncatula cD... 59 2e-024
gb|BQ148034.1|BQ148034 NF058A08FL1F1065 Developing flower M... 59 3e-023
gb|CX528236.1|CX528236 s13dNF53C02AT018_516984 Aphid-Infect... 69 2e-022
gb|BF641397.1|BF641397 NF061H12IN1F1103 Insect herbivory Me... 68 4e-022
gb|BE997487.1|BE997487 EST429210 GVSN Medicago truncatula c... 59 5e-022
gb|AJ497431.1|AJ497431 AJ497431 MTFLOW Medicago truncatula ... 57 7e-022
gb|BF003245.1|BF003245 EST431673 KV1 Medicago truncatula cD... 55 1e-021
emb|CR345859.1| mte1-8C19FM1 BAC end, cultivar Jemalong A17... 73 5e-021
gb|AL380060.1|AL380060 MtBB50B07F1 MtBB Medicago truncatula... 66 7e-021
>gb|BF651193.1|BF651193 NF102H07EC1F1062 Elicited cell culture Medicago truncatula cDNA
clone NF102H07EC 5', mRNA sequence
Length = 632
Score = 132 bits (283), Expect(2) = 1e-049
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K I+RTM VKGLTL+HLKSHLQKYRLGKQ+GK+ E KD SYLL++ + SP+
Sbjct: 358 KATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQAGKDFDEGCKDGSYLLESPGTENSSPK 537
Query: 584 VPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
+PA D E EVKEALRAQMEVQ +LH VE
Sbjct: 538 LPASDANEGHEVKEALRAQMEVQSKLHLLVE 630
Score = 100 bits (214), Expect(2) = 7e-030
Identities = 52/85 (61%), Positives = 56/85 (65%)
Frame = -1 / -1
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPSLPDCF 496
ST CSLL TSICAL+ASLTSW SF S AG GD SRR D SL S S P C
Sbjct: 629 STSKCSLLCTSICALNASLTSWPSFASEAGNFGDEFSVPGLSRRYDPSLHPSSKSFPACL 450
Query: 495 PNLYF*RWLFK*KRVRPLTPIVLKI 421
P+LYF*R LFK* V+PLT +VL I
Sbjct: 449 PSLYF*R*LFK**SVKPLTFMVLMI 375
Score = 86.3 bits (182), Expect(2) = 1e-049
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = +3 / +1
Query: 282 TRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
T P LVLT+DPKPRLRWT DLH+RFVDAV QLGGP KATPK
Sbjct: 235 THLAASDPCLVLTSDPKPRLRWTTDLHQRFVDAVTQLGGPTKATPK 372
Score = 51.5 bits (106), Expect(2) = 7e-030
Identities = 25/39 (64%), Positives = 25/39 (64%)
Frame = -3 / -1
Query: 418 FGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLG 302
FGVA GPPS TASTKR RS V R G GS V TR G
Sbjct: 371 FGVALVGPPS*VTASTKRW*RSVVQRRRGFGSEVRTRQG 255
>gb|BG645083.1|BG645083 EST506702 KV3 Medicago truncatula cDNA clone pKV3-39M15 5' end,
mRNA sequence
Length = 762
Score = 92.3 bits (195), Expect(3) = 7e-049
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +3 / +1
Query: 276 GATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G + G P LVLTADPKPRLRWT DLHERFVDAV QLGGP KATPK
Sbjct: 184 GGVSNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPK 327
Score = 76.2 bits (160), Expect(3) = 7e-049
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
++ K I+RTM VKGLTLFHLKSHLQKYRLGKQSGK+ E KD
Sbjct: 313 KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDIGEGCKD 444
Score = 66.1 bits (138), Expect(3) = 7e-049
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +2 / +1
Query: 512 EGSEQSKDASYLLDAQSGMSVSPRVPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
EG + SYLL++ + SP++P D E E+KEALRAQMEVQ +LH QVE
Sbjct: 430 EGCKDGMTGSYLLESPGTENPSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVE 594
Score = 57.9 bits (120), Expect(3) = 5e-028
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -3 / -2
Query: 418 FGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPP 296
FGVA GPPS TASTKRS +S V R G GSAV TR G P
Sbjct: 326 FGVALLGPPS*VTASTKRSCKS*VQRRRGFGSAVKTRQGSP 204
Score = 56.5 bits (117), Expect(3) = 5e-028
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -1 / -2
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPS 511
STC CSLL TSICAL+ASL S SF+S G GD S+R*D + PS
Sbjct: 593 STCKCSLLCTSICALNASLIS*PSFVSEVGNFGDGFSVPGLSKR*DPVIPSLHPS 429
Score = 49.6 bits (102), Expect(3) = 5e-028
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 534 SLDCSDPSLPDCFPNLYF*RWLFK*KRVRPLTPIVLKI 421
SL S S PDC P+LYF*R LFK* RV+PLT +V I
Sbjct: 443 SLHPSPISFPDCLPSLYF*R*LFK*NRVKPLTFMVRMI 330
>gb|AW774787.1|AW774787 EST333938 KV3 Medicago truncatula cDNA clone pKV3-23N22, mRNA
sequence
Length = 694
Score = 92.3 bits (195), Expect(3) = 7e-049
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +3 / +1
Query: 276 GATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G + G P LVLTADPKPRLRWT DLHERFVDAV QLGGP KATPK
Sbjct: 184 GGVSNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPK 327
Score = 76.2 bits (160), Expect(3) = 7e-049
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
++ K I+RTM VKGLTLFHLKSHLQKYRLGKQSGK+ E KD
Sbjct: 313 KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDIGEGCKD 444
Score = 66.1 bits (138), Expect(3) = 7e-049
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +2 / +1
Query: 512 EGSEQSKDASYLLDAQSGMSVSPRVPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
EG + SYLL++ + SP++P D E E+KEALRAQMEVQ +LH QVE
Sbjct: 430 EGCKDGMTGSYLLESPGTENPSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVE 594
Score = 57.9 bits (120), Expect(3) = 5e-028
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -3 / -3
Query: 418 FGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPP 296
FGVA GPPS TASTKRS +S V R G GSAV TR G P
Sbjct: 326 FGVALLGPPS*VTASTKRSCKS*VQRRRGFGSAVKTRQGSP 204
Score = 56.5 bits (117), Expect(3) = 5e-028
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -1 / -3
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPS 511
STC CSLL TSICAL+ASL S SF+S G GD S+R*D + PS
Sbjct: 593 STCKCSLLCTSICALNASLIS*PSFVSEVGNFGDGFSVPGLSKR*DPVIPSLHPS 429
Score = 49.6 bits (102), Expect(3) = 5e-028
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 534 SLDCSDPSLPDCFPNLYF*RWLFK*KRVRPLTPIVLKI 421
SL S S PDC P+LYF*R LFK* RV+PLT +V I
Sbjct: 443 SLHPSPISFPDCLPSLYF*R*LFK*NRVKPLTFMVRMI 330
>gb|CX530825.1|CX530825 s13dNF33F09MJ076_247665 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 612
Score = 92.3 bits (195), Expect(3) = 7e-049
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +3 / +1
Query: 276 GATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G + G P LVLTADPKPRLRWT DLHERFVDAV QLGGP KATPK
Sbjct: 202 GGVSNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPK 345
Score = 76.2 bits (160), Expect(3) = 7e-049
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
++ K I+RTM VKGLTLFHLKSHLQKYRLGKQSGK+ E KD
Sbjct: 331 KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDIGEGCKD 462
Score = 66.1 bits (138), Expect(3) = 7e-049
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +2 / +1
Query: 512 EGSEQSKDASYLLDAQSGMSVSPRVPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
EG + SYLL++ + SP++P D E E+KEALRAQMEVQ +LH QVE
Sbjct: 448 EGCKDGMTGSYLLESPGTENPSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVE 612
Score = 57.9 bits (120), Expect(3) = 5e-028
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -3 / -2
Query: 418 FGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPP 296
FGVA GPPS TASTKRS +S V R G GSAV TR G P
Sbjct: 344 FGVALLGPPS*VTASTKRSCKS*VQRRRGFGSAVKTRQGSP 222
Score = 56.5 bits (117), Expect(3) = 5e-028
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = -1 / -2
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPS 511
STC CSLL TSICAL+ASL S SF+S G GD S+R*D + PS
Sbjct: 611 STCKCSLLCTSICALNASLIS*PSFVSEVGNFGDGFSVPGLSKR*DPVIPSLHPS 447
Score = 49.6 bits (102), Expect(3) = 5e-028
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 534 SLDCSDPSLPDCFPNLYF*RWLFK*KRVRPLTPIVLKI 421
SL S S PDC P+LYF*R LFK* RV+PLT +V I
Sbjct: 461 SLHPSPISFPDCLPSLYF*R*LFK*NRVKPLTFMVRMI 348
>gb|AW736264.1|AW736264 EST332326 KV3 Medicago truncatula cDNA clone pKV3-12O2, mRNA
sequence
Length = 547
Score = 92.3 bits (195), Expect(3) = 2e-046
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +3 / +1
Query: 276 GATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G + G P LVLTADPKPRLRWT DLHERFVDAV QLGGP KATPK
Sbjct: 145 GGVSNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPK 288
Score = 73.0 bits (153), Expect(3) = 2e-046
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
++ K I+RTM VKGLTLFHLKSHLQKYRLGKQS K+ E KD
Sbjct: 274 KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSXKDIGEGCKD 405
Score = 61.1 bits (127), Expect(3) = 2e-046
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2 / +1
Query: 512 EGSEQSKDASYLLDAQSGMSVSPRVPAQDMKESQEVKEALRAQMEVQRRLH 664
EG + SYLL++ + SP++P D E E+KEALRAQMEVQ +LH
Sbjct: 391 EGCKDGMTGSYLLESPGTENPSPKLPTSDTNEGYEIKEALRAQMEVQSKLH 543
Score = 57.9 bits (120), Expect(3) = 2e-024
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -3 / -3
Query: 418 FGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPP 296
FGVA GPPS TASTKRS +S V R G GSAV TR G P
Sbjct: 287 FGVALLGPPS*VTASTKRSCKS*VQRRRGFGSAVKTRQGSP 165
Score = 48.3 bits (99), Expect(3) = 2e-024
Identities = 26/51 (50%), Positives = 30/51 (58%)
Frame = -1 / -3
Query: 663 CSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPS 511
CSLL TSICAL+ASL S SF+S G GD S+R*D + PS
Sbjct: 542 CSLLCTSICALNASLIS*PSFVSEVGNFGDGFSVPGLSKR*DPVIPSLHPS 390
Score = 45.5 bits (93), Expect(3) = 2e-024
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = -1 / -3
Query: 534 SLDCSDPSLPDCFPNLYF*RWLFK*KRVRPLTPIVLKI 421
SL S S DC P+LYF*R LFK* RV+PLT +V I
Sbjct: 404 SLHPSPISFXDCLPSLYF*R*LFK*NRVKPLTFMVRMI 291
>gb|AW560790.1|AW560790 EST315838 DSIR Medicago truncatula cDNA clone pDSIR-30A5, mRNA
sequence
Length = 529
Score = 127 bits (272), Expect(2) = 2e-045
Identities = 55/85 (64%), Positives = 65/85 (76%)
Frame = +2 / +2
Query: 422 ILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPRVPAQDM 601
I+RTM VKGLTL+HLKSHLQKYRLGKQ+GK+ E KD SYLL++ + S ++PA D
Sbjct: 269 IMRTMNVKGLTLYHLKSHLQKYRLGKQAGKDSDEGCKDGSYLLESPGTENSSSKLPASDA 448
Query: 602 KESQEVKEALRAQMEVQRRLHEQVE 676
E EVKEALRAQMEVQ +LH VE
Sbjct: 449 YEGHEVKEALRAQMEVQSKLHLLVE 523
Score = 95.9 bits (203), Expect(2) = 7e-027
Identities = 50/85 (58%), Positives = 55/85 (64%)
Frame = -1 / -2
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPSLPDCF 496
ST CSLL TSICAL+ASLTSW S+ S AG D SRR D SL S S P C
Sbjct: 522 STSKCSLLCTSICALNASLTSWPSYASEAGNFEDEFSVPGLSRRYDPSLHPSSESFPACL 343
Query: 495 PNLYF*RWLFK*KRVRPLTPIVLKI 421
P+LYF*R LFK* V+PLT +VL I
Sbjct: 342 PSLYF*R*LFK**SVKPLTFMVLMI 268
Score = 77.1 bits (162), Expect(2) = 2e-045
Identities = 31/45 (68%), Positives = 33/45 (73%)
Frame = +3 / +2
Query: 282 TRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATP 416
T P LVLT+DPKP LRWT DLH+R VDAV QLGGP KATP
Sbjct: 128 THLAASDPCLVLTSDPKPGLRWTTDLHQRCVDAVTQLGGPTKATP 262
Score = 46.4 bits (95), Expect(2) = 7e-027
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = -3 / -2
Query: 415 GVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLG 302
GVA GPPS TAST+R RS V R G GS V TR G
Sbjct: 261 GVALVGPPS*VTASTQRW*RSVVQRRPGFGSEVRTRQG 148
>gb|BF003686.1|BF003686 EST432184 KV1 Medicago truncatula cDNA clone pKV1-13K10, mRNA
sequence
Length = 529
Score = 116 bits (247), Expect(2) = 9e-045
Identities = 49/79 (62%), Positives = 60/79 (75%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K I+RTM VKGLTL+HLKSHLQKYRLGKQ+GK+ E KD SYLL++ + SP+
Sbjct: 291 KATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQAGKDFDEGCKDGSYLLESPGTENSSPK 470
Query: 584 VPAQDMKESQEVKEALRAQ 640
+PA D E EVKEALRAQ
Sbjct: 471 LPASDANEGHEVKEALRAQ 527
Score = 86.3 bits (182), Expect(2) = 9e-045
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = +3 / +3
Query: 282 TRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
T P LVLT+DPKPRLRWT DLH+RFVDAV QLGGP KATPK
Sbjct: 168 THLAASDPCLVLTSDPKPRLRWTTDLHQRFVDAVTQLGGPTKATPK 305
Score = 84.5 bits (178), Expect(2) = 6e-025
Identities = 44/74 (59%), Positives = 48/74 (64%)
Frame = -1 / -1
Query: 642 ICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPSLPDCFPNLYF*RWLFK 463
ICAL+ASLTSW SF S AG GD SRR D SL S S P C P+LYF*R LFK
Sbjct: 529 ICALNASLTSWPSFASEAGNFGDEFSVPGLSRRYDPSLHPSSKSFPACLPSLYF*R*LFK 350
Query: 462 *KRVRPLTPIVLKI 421
* V+PLT +VL I
Sbjct: 349 **SVKPLTFMVLMI 308
Score = 51.5 bits (106), Expect(2) = 6e-025
Identities = 25/39 (64%), Positives = 25/39 (64%)
Frame = -3 / -1
Query: 418 FGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLG 302
FGVA GPPS TASTKR RS V R G GS V TR G
Sbjct: 304 FGVALVGPPS*VTASTKRW*RSVVQRRRGFGSEVRTRQG 188
>gb|AW686035.1|AW686035 NF032G08NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF032G08NR 5', mRNA sequence
Length = 658
Score = 92.3 bits (195), Expect(3) = 9e-041
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +3 / +2
Query: 276 GATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G + G P LVLTADPKPRLRWT DLHERFVDAV QLGGP KATPK
Sbjct: 269 GGVSNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPK 412
Score = 76.2 bits (160), Expect(3) = 9e-041
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
++ K I+RTM VKGLTLFHLKSHLQKYRLGKQSGK+ E KD
Sbjct: 398 KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDIGEGCKD 529
Score = 57.9 bits (120), Expect(3) = 1e-021
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -3 / -2
Query: 418 FGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPP 296
FGVA GPPS TASTKRS +S V R G GSAV TR G P
Sbjct: 411 FGVALLGPPS*VTASTKRSCKS*VQRRRGFGSAVKTRQGSP 289
Score = 49.6 bits (102), Expect(3) = 1e-021
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 534 SLDCSDPSLPDCFPNLYF*RWLFK*KRVRPLTPIVLKI 421
SL S S PDC P+LYF*R LFK* RV+PLT +V I
Sbjct: 528 SLHPSPISFPDCLPSLYF*R*LFK*NRVKPLTFMVRMI 415
Score = 38.6 bits (78), Expect(3) = 9e-041
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +3
Query: 581 RVPAQDMKESQEVKEALRAQMEVQ 652
++P D E E+KEALRAQMEVQ
Sbjct: 582 KLPTSDTNEGYEIKEALRAQMEVQ 653
Score = 34.5 bits (69), Expect(3) = 1e-021
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -1 / -1
Query: 657 LLWTSICALSASLTSWLSFISWAGTL 580
LL TSICAL+ASL S SF+S G L
Sbjct: 658 LLCTSICALNASLIS*PSFVSEVGNL 581
>gb|AW685481.1|AW685481 NF030D05NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF030D05NR 5', mRNA sequence
Length = 656
Score = 92.3 bits (195), Expect(3) = 3e-038
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +3 / +3
Query: 276 GATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G + G P LVLTADPKPRLRWT DLHERFVDAV QLGGP KATPK
Sbjct: 306 GGVSNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPK 449
Score = 76.2 bits (160), Expect(3) = 3e-038
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
++ K I+RTM VKGLTLFHLKSHLQKYRLGKQSGK+ E KD
Sbjct: 435 KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDIGEGCKD 566
Score = 30.4 bits (60), Expect(3) = 3e-038
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2 / +3
Query: 512 EGSEQSKDASYLLDAQSGMSVSPRVPAQDMKESQE 616
EG + SYLL++ + SP++P D E E
Sbjct: 552 EGCKDGMTGSYLLESPGTENPSPKLPTSDTNEGYE 656
>gb|BF637128.1|BF637128 NF072E07LF1F1052 Developing leaf Medicago truncatula cDNA clone
NF072E07LF 5', mRNA sequence
Length = 515
Score = 87.2 bits (184), Expect(2) = 4e-036
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K I+RTM VKGLTL+HLKSHLQKYRLGKQ+GK+ E KD SYLL++ + SP+
Sbjct: 335 KATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQAGKDFDEGCKDGSYLLESPGTENSSPK 514
Score = 86.3 bits (182), Expect(2) = 4e-036
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = +3 / +2
Query: 282 TRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
T P LVLT+DPKPRLRWT DLH+RFVDAV QLGGP KATPK
Sbjct: 212 THLAASDPCLVLTSDPKPRLRWTTDLHQRFVDAVTQLGGPTKATPK 349
>gb|BE202678.1|BE202678 EST402700 KV1 Medicago truncatula cDNA clone pKV1-2F8, mRNA
sequence
Length = 578
Score = 67.0 bits (140), Expect(3) = 7e-028
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3 / +2
Query: 312 VLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
VL+ D KPRL+WT +LH+RF DA+ QLGG EKATPK
Sbjct: 5 VLSTDAKPRLKWTHELHQRFTDAINQLGGAEKATPK 112
Score = 59.3 bits (123), Expect(3) = 7e-028
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
++ K+++R MG+ GLTL+HLKSHLQKYRLGK E +K
Sbjct: 98 KATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQLVETCSDNK 226
Score = 37.3 bits (75), Expect(3) = 7e-028
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2 / +2
Query: 605 ESQEVKEALRAQMEVQRRLHEQVE 676
ES ++ EAL QMEVQ++L+EQ+E
Sbjct: 305 ESLKIAEALEVQMEVQKKLYEQIE 376
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence
Length = 172016
Score = 80.3 bits (169), Expect(4) = 1e-027
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +3 / -3
Query: 276 GATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGP 401
G + G P LVLTADPKPRLRWT DLHERFVDAV QLGGP
Sbjct: 26730 GGVSNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGP 26605
Score = 49.2 bits (101), Expect(4) = 1e-027
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +2 / -3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K I+RTM VKGLTLFHLKSHLQ
Sbjct: 24336 EATPKAIMRTMNVKGLTLFHLKSHLQ 24259
Score = 42.3 bits (86), Expect(4) = 1e-027
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2 / -1
Query: 599 MKESQEVKEALRAQMEVQRRLHEQVE 676
M E+KEALRAQMEVQ +LH QVE
Sbjct: 23591 MHRGYEIKEALRAQMEVQSKLHLQVE 23514
Score = 35.9 bits (72), Expect(4) = 1e-027
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / -3
Query: 476 LQKYRLGKQSGKEGSEQSKD 535
LQKYRLGKQSGK+ E KD
Sbjct: 24183 LQKYRLGKQSGKDIGEGCKD 24124
>gb|BG453405.1|BG453405 NF090G10LF1F1081 Developing leaf Medicago truncatula cDNA clone
NF090G10LF 5', mRNA sequence
Length = 667
Score = 67.5 bits (141), Expect(3) = 2e-027
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +3 / +3
Query: 312 VLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
VL+ D KPRL+WT +LH+RF+DA+ QLGG +KATPK
Sbjct: 144 VLSTDAKPRLKWTPELHQRFIDAINQLGGADKATPK 251
Score = 58.8 bits (122), Expect(3) = 2e-027
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASY 544
++ K+I+R M + GLTL+HLKSHLQKYRLGK E +K Y
Sbjct: 237 KATPKSIMRVMEIPGLTLYHLKSHLQKYRLGKSQQLETCSDNKKQVY 377
Score = 35.9 bits (72), Expect(3) = 2e-027
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 605 ESQEVKEALRAQMEVQRRLHEQVE 676
E+ E+ AL QMEV+R+L+EQ+E
Sbjct: 447 ENMEISHALEMQMEVERKLNEQIE 518
>gb|DW019329.1|DW019329 EST1228290 MTY Medicago truncatula cDNA clone MTYBH65, mRNA
sequence
Length = 872
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +2
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 236 KQRLRWTHELHERFVDAVAQLGGPDRATPK 325
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +2
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 323 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 439
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 482 DGSSGMQITEALKLQMEVQKRLHEQLE 562
>gb|BG647218.1|BG647218 EST508837 HOGA Medicago truncatula cDNA clone pHOGA-16C19 5' end,
mRNA sequence
Length = 817
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 193 KQRLRWTHELHERFVDAVAQLGGPDRATPK 282
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 280 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 396
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 439 DGSSGMQITEALKLQMEVQKRLHEQLE 519
>gb|BF641878.1|BF641878 NF051B03IN1F1028 Insect herbivory Medicago truncatula cDNA clone
NF051B03IN 5', mRNA sequence
Length = 690
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 226 KQRLRWTHELHERFVDAVAQLGGPDRATPK 315
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 313 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 429
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 472 DGSSGMQITEALKLQMEVQKRLHEQLE 552
>gb|BI266414.1|BI266414 NF103H04IN1F1044 Insect herbivory Medicago truncatula cDNA clone
NF103H04IN 5', mRNA sequence
Length = 664
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 262 KQRLRWTHELHERFVDAVAQLGGPDRATPK 351
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 349 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 465
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 508 DGSSGMQITEALKLQMEVQKRLHEQLE 588
>gb|BF645185.1|BF645185 NF037G12EC1F1099 Elicited cell culture Medicago truncatula cDNA
clone NF037G12EC 5', mRNA sequence
Length = 651
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 276 KQRLRWTHELHERFVDAVAQLGGPDRATPK 365
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 363 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 479
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 522 DGSSGMQITEALKLQMEVQKRLHEQLE 602
>gb|AW776924.1|AW776924 EST335989 DSIL Medicago truncatula cDNA clone pDSIL-16F10, mRNA
sequence
Length = 615
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 241 KQRLRWTHELHERFVDAVAQLGGPDRATPK 330
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 328 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 444
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 487 DGSSGMQITEALKLQMEVQKRLHEQLE 567
>gb|BI309299.1|BI309299 EST530709 GPOD Medicago truncatula cDNA clone pGPOD-11E2 5' end,
mRNA sequence
Length = 608
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 234 KQRLRWTHELHERFVDAVAQLGGPDRATPK 323
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 321 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 437
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 480 DGSSGMQITEALKLQMEVQKRLHEQLE 560
>gb|CX529905.1|CX529905 s13dNF55E12MJ088_245850 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 578
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 237 KQRLRWTHELHERFVDAVAQLGGPDRATPK 326
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 324 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 440
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 483 DGSSGMQITEALKLQMEVQKRLHEQLE 563
>gb|DW016087.1|DW016087 EST1225048 MTY Medicago truncatula cDNA clone MTYAD02, mRNA
sequence
Length = 563
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 175 KQRLRWTHELHERFVDAVAQLGGPDRATPK 264
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 262 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 378
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 421 DGSSGMQITEALKLQMEVQKRLHEQLE 501
>gb|CB892496.1|CB892496 EST649465 KV3 Medicago truncatula cDNA clone KV3-54P17, mRNA
sequence
Length = 557
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 198 KQRLRWTHELHERFVDAVAQLGGPDRATPK 287
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 285 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 401
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 444 DGSSGMQITEALKLQMEVQKRLHEQLE 524
>gb|BF003952.1|BF003952 EST432450 KV1 Medicago truncatula cDNA clone pKV1-14M1, mRNA
sequence
Length = 541
Score = 65.7 bits (137), Expect(3) = 2e-027
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +2
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 164 KQRLRWTHELHERFVDAVAQLGGPDRATPK 253
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +2
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 251 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 367
Score = 39.6 bits (80), Expect(3) = 2e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 410 DGSSGMQITEALKLQMEVQKRLHEQLE 490
>gb|BE202685.1|BE202685 EST402707 KV1 Medicago truncatula cDNA clone pKV1-2H8, mRNA
sequence
Length = 519
Score = 65.7 bits (137), Expect(3) = 5e-026
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 195 KQRLRWTHELHERFVDAVAQLGGPDRATPK 284
Score = 56.5 bits (117), Expect(3) = 5e-026
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 282 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 398
Score = 35.0 bits (70), Expect(3) = 5e-026
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQV 673
D ++ EAL+ MEVQ+RLHEQ+
Sbjct: 441 DGSSGMQITEALKLSMEVQKRLHEQL 518
>gb|BG453105.1|BG453105 NF090G12LF1F1097 Developing leaf Medicago truncatula cDNA clone
NF090G12LF 5', mRNA sequence
Length = 661
Score = 57.4 bits (119), Expect(3) = 6e-025
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3 / +3
Query: 345 WTADLHERFVDAVAQLGGPEKATPK 419
WT +LHERFVDAVAQLGGP++ATPK
Sbjct: 3 WTHELHERFVDAVAQLGGPDRATPK 77
Score = 56.5 bits (117), Expect(3) = 6e-025
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 75 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 191
Score = 39.6 bits (80), Expect(3) = 6e-025
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 234 DGSSGMQITEALKLQMEVQKRLHEQLE 314
>gb|BG453939.1|BG453939 NF096C06LF1F1039 Developing leaf Medicago truncatula cDNA clone
NF096C06LF 5', mRNA sequence
Length = 658
Score = 57.4 bits (119), Expect(3) = 6e-025
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3 / +3
Query: 345 WTADLHERFVDAVAQLGGPEKATPK 419
WT +LHERFVDAVAQLGGP++ATPK
Sbjct: 3 WTHELHERFVDAVAQLGGPDRATPK 77
Score = 56.5 bits (117), Expect(3) = 6e-025
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 75 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 191
Score = 39.6 bits (80), Expect(3) = 6e-025
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 234 DGSSGMQITEALKLQMEVQKRLHEQLE 314
>gb|BG450990.1|BG450990 NF097F03DT1F1029 Drought Medicago truncatula cDNA clone NF097F03DT
5', mRNA sequence
Length = 646
Score = 57.4 bits (119), Expect(3) = 6e-025
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3 / +3
Query: 345 WTADLHERFVDAVAQLGGPEKATPK 419
WT +LHERFVDAVAQLGGP++ATPK
Sbjct: 3 WTHELHERFVDAVAQLGGPDRATPK 77
Score = 56.5 bits (117), Expect(3) = 6e-025
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 75 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 191
Score = 39.6 bits (80), Expect(3) = 6e-025
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 234 DGSSGMQITEALKLQMEVQKRLHEQLE 314
>gb|AW684291.1|AW684291 NF015B02NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF015B02NR 5', mRNA sequence
Length = 546
Score = 62.0 bits (129), Expect(3) = 6e-025
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = +3 / +3
Query: 276 GATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G G S +A KPR+RWT +LHE FV+AV QLGG E+ATPK
Sbjct: 75 GENHVGVAPSSSANSATTKPRMRWTPELHEAFVEAVNQLGGSERATPK 218
Score = 46.0 bits (94), Expect(3) = 6e-025
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGK 499
K +L+ M V+GLT++H+KSHLQKYR +
Sbjct: 216 KGVLKLMKVEGLTIYHVKSHLQKYRTAR 299
Score = 45.5 bits (93), Expect(3) = 6e-025
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 584 VPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
+ + D+K E+ EALR QMEVQ+RLHEQ+E
Sbjct: 357 ISSLDLKTGIEITEALRLQMEVQKRLHEQLE 449
>gb|BF003246.1|BF003246 EST431674 KV1 Medicago truncatula cDNA clone pKV1-2D23, mRNA
sequence
Length = 615
Score = 59.3 bits (123), Expect(3) = 2e-024
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
++ K+++R MG+ GLTL+HLKSHLQKYRLGK E +K
Sbjct: 97 KATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQLVETCSDNK 225
Score = 55.6 bits (115), Expect(3) = 2e-024
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +3 / +3
Query: 312 VLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
VL+ D KPRL+WT +LH+RF DA+ QLGG K+ K
Sbjct: 3 VLSTDAKPRLKWTHELHQRFTDAINQLGGA*KSNTK 110
Score = 37.3 bits (75), Expect(3) = 2e-024
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 605 ESQEVKEALRAQMEVQRRLHEQVE 676
ES ++ EAL QMEVQ++L+EQ+E
Sbjct: 304 ESLKIAEALEVQMEVQKKLYEQIE 375
>gb|BQ148034.1|BQ148034 NF058A08FL1F1065 Developing flower Medicago truncatula cDNA clone
NF058A08FL 5', mRNA sequence
Length = 671
Score = 59.3 bits (123), Expect(3) = 3e-023
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
++ K+++R MG+ GLTL+HLKSHLQKYRLGK E +K
Sbjct: 121 KATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQLVETCSDNK 249
Score = 51.0 bits (105), Expect(3) = 3e-023
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3 / +3
Query: 309 LVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
LVL+ D KPRL+WT +LH+RF DA+ QL K+ K
Sbjct: 24 LVLSTDAKPRLKWTHELHQRFTDAINQLWRCRKSNTK 134
Score = 37.3 bits (75), Expect(3) = 3e-023
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 605 ESQEVKEALRAQMEVQRRLHEQVE 676
ES ++ EAL QMEVQ++L+EQ+E
Sbjct: 328 ESLKIAEALEVQMEVQKKLYEQIE 399
>gb|CX528236.1|CX528236 s13dNF53C02AT018_516984 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 550
Score = 68.9 bits (144), Expect(2) = 2e-022
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3 / +2
Query: 309 LVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
LVL+ D KPRL+WT +LH+RF DA+ QLGG EKATPK
Sbjct: 332 LVLSTDAKPRLKWTHELHQRFTDAINQLGGAEKATPK 442
Score = 58.3 bits (121), Expect(2) = 2e-022
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K+++R MG+ GLTL+HLKSHLQKYRLGK
Sbjct: 428 KATPKSLMRVMGIPGLTLYHLKSHLQKYRLGK 523
>gb|BF641397.1|BF641397 NF061H12IN1F1103 Insect herbivory Medicago truncatula cDNA clone
NF061H12IN 5', mRNA sequence
Length = 664
Score = 67.5 bits (141), Expect(2) = 4e-022
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +3 / +1
Query: 312 VLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
VL+ D KPRL+WT +LH+RF+DA+ QLGG +KATPK
Sbjct: 310 VLSTDAKPRLKWTPELHQRFIDAINQLGGADKATPK 417
Score = 58.8 bits (122), Expect(2) = 4e-022
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASY 544
++ K+I+R M + GLTL+HLKSHLQKYRLGK E +K Y
Sbjct: 403 KATPKSIMRVMEIPGLTLYHLKSHLQKYRLGKSQQLETCSDNKKQVY 543
>gb|BE997487.1|BE997487 EST429210 GVSN Medicago truncatula cDNA clone pGVSN-1C12, mRNA
sequence
Length = 430
Score = 58.8 bits (122), Expect(3) = 5e-022
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
KPR+RW+ +LHE FV+AV QLGG EKATPK
Sbjct: 136 KPRMRWSPELHEAFVEAVNQLGGSEKATPK 225
Score = 46.0 bits (94), Expect(3) = 5e-022
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2 / +3
Query: 554 AQSGMSVSPRVPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
++ MS + + D+K S+ + EALR QME+Q+RLHEQ+E
Sbjct: 294 SEKKMSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLE 416
Score = 38.6 bits (78), Expect(3) = 5e-022
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQK 484
++ K +L M V+GLT++H+KSH QK
Sbjct: 211 KATPKGVLNLMNVEGLTIYHVKSHFQK 291
>gb|AJ497431.1|AJ497431 AJ497431 MTFLOW Medicago truncatula cDNA clone mt--abc955109b11,
mRNA sequence
Length = 638
Score = 56.5 bits (117), Expect(3) = 7e-022
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K R+RWT DLHE+FV+ V +LGG EKATPK
Sbjct: 3 KTRIRWTKDLHEKFVECVNRLGGAEKATPK 92
Score = 48.3 bits (99), Expect(3) = 7e-022
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQ 559
++ K IL+ M +GLT+FH+KSHLQKYR K + +S ++ D Q
Sbjct: 78 KATPKAILKMMDSEGLTIFHVKSHLQKYRTAKFMPESAQGKSDKRIHIDDVQ 233
Score = 38.2 bits (77), Expect(3) = 7e-022
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2 / +3
Query: 599 MKESQEVKEALRAQMEVQRRLHEQVE 676
+K ++KEAL+ Q++ QRRLHEQ+E
Sbjct: 243 VKTGFQIKEALQLQLDAQRRLHEQLE 320
>gb|BF003245.1|BF003245 EST431673 KV1 Medicago truncatula cDNA clone pKV1-2D23, mRNA
sequence
Length = 476
Score = 55.1 bits (114), Expect(3) = 1e-021
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLG 496
++ K+++R MG+ GLT++HLKSHLQKYRLG
Sbjct: 61 KATPKSLMRVMGIPGLTMYHLKSHLQKYRLG 153
Score = 50.1 bits (103), Expect(3) = 1e-021
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3 / +1
Query: 345 WTADLHERFVDAVAQLGGPEKATPK 419
WT +LH+RF DA+ QLGG EKATPK
Sbjct: 1 WTHELHQRFTDAINQLGGAEKATPK 75
Score = 37.3 bits (75), Expect(3) = 1e-021
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2 / +2
Query: 605 ESQEVKEALRAQMEVQRRLHEQVE 676
ES ++ EAL QMEVQ++L+EQ+E
Sbjct: 269 ESLKIAEALEVQMEVQKKLYEQIE 340
>emb|CR345859.1| mte1-8C19FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 609
Score = 73.5 bits (154), Expect(2) = 5e-021
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +3 / +1
Query: 297 GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G LVLT DPKPRLRWT +LHERFVDAV QLGGP+
Sbjct: 34 GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPD 141
Score = 49.2 bits (101), Expect(2) = 5e-021
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K I+R MGVKGLTL+HLKSHLQ
Sbjct: 253 EATPKTIMRVMGVKGLTLYHLKSHLQ 330
>gb|AL380060.1|AL380060 MtBB50B07F1 MtBB Medicago truncatula cDNA clone MtBB50B07 T3, mRNA
sequence
Length = 478
Score = 65.7 bits (137), Expect(2) = 7e-021
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFVDAVAQLGGP++ATPK
Sbjct: 238 KQRLRWTHELHERFVDAVAQLGGPDRATPK 327
Score = 56.5 bits (117), Expect(2) = 7e-021
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K S++ K
Sbjct: 325 KGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGK 441
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 752,516,310
Number of Sequences: 392609
Number of extensions: 9262898
Number of successful extensions: 55311
Number of sequences better than 1.0e-020: 46
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 31287058164
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)