TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 4790360.2.1
         (667 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CA920629.1|CA920629  EST638347 MTUS Medicago truncatula c...   169   3e-041
gb|AJ499253.1|AJ499253  AJ499253 MTGIM Medicago truncatula c...   155   9e-037
gb|BQ148856.1|BQ148856  NF083B11FL1F1092 Developing flower M...   134   1e-030

>gb|CA920629.1|CA920629 EST638347 MTUS Medicago truncatula cDNA clone MTUS-30E1, mRNA
           sequence
          Length = 748

 Score =  169 bits (364), Expect = 3e-041
 Identities = 66/106 (62%), Positives = 78/106 (73%)
 Frame = +2 / -2

                                                                       
Query: 20  LLGSQYFLHAYGPIYXXXXXXXXXXXXXRNNSFRMFSNEDVTIGSWMLAMNVNHENTHAL 199
           LL  +YFLHAY PIY             RN+SFRMFSNEDVTIG+WMLAMNV HEN   L
Sbjct: 708 LLEREYFLHAYVPIYALSADVVQSLVFLRNDSFRMFSNEDVTIGAWMLAMNVKHENNLEL 529

                                                         
Query: 200 CEPDCTESSIAVWDIPKCSGLCHPEVKMLELHERKECTGGPTVAAE 337
           C  DCT +SIAVWDIPKCSGLC+PE KMLELH+++ C+  PT+ ++
Sbjct: 528 CASDCTATSIAVWDIPKCSGLCNPEKKMLELHQKESCSQSPTLESD 391




 Score =  116 bits (247), Expect = 5e-025
 Identities = 57/84 (67%), Positives = 65/84 (77%)
 Frame = -2 / +2

                                                                       
Query: 270 GWHRPEHFGMSQTAIEDSVQSGSQSACVFSWLTFIASIHDPIVTSSLLNIRKLLFRNATK 91
           G HRPEH G+S TAI+ +VQS +QS+ +FS LTFIASI  PIVTSSLLNIRKL FR  TK
Sbjct: 458 GLHRPEHLGISHTAIDVAVQSEAQSSRLFSCLTFIASIQAPIVTSSLLNIRKLSFRRNTK 637

                                   
Query: 90  LATTSADKA*IGPYA*RKYCDPSK 19
           L TTSA++A IG  A*RKY   SK
Sbjct: 638 L*TTSAERAYIGT*A*RKYSLSSK 709



>gb|AJ499253.1|AJ499253 AJ499253 MTGIM Medicago truncatula cDNA clone mtgmacc120001h06,
           mRNA sequence
          Length = 473

 Score =  155 bits (332), Expect = 9e-037
 Identities = 57/78 (73%), Positives = 66/78 (84%)
 Frame = +2 / -3

                                                                       
Query: 104 RNNSFRMFSNEDVTIGSWMLAMNVNHENTHALCEPDCTESSIAVWDIPKCSGLCHPEVKM 283
           RNNSFRMFSNEDVTIG+WMLAMNVNHEN H LC P+CT +SIAVWDIPKCSGLC+PE +M
Sbjct: 468 RNNSFRMFSNEDVTIGAWMLAMNVNHENIHELCSPECTSTSIAVWDIPKCSGLCNPEKRM 289

                             
Query: 284 LELHERKECTGGPTVAAE 337
           LELH+   C   PT+ ++
Sbjct: 288 LELHQMDSCIQSPTMESD 235



>gb|BQ148856.1|BQ148856 NF083B11FL1F1092 Developing flower Medicago truncatula cDNA clone
           NF083B11FL 5', mRNA sequence
          Length = 669

 Score =  134 bits (287), Expect = 1e-030
 Identities = 54/80 (67%), Positives = 58/80 (72%)
 Frame = +2 / +2

                                                                       
Query: 2   HEPQSFLLGSQYFLHAYGPIYXXXXXXXXXXXXXRNNSFRMFSNEDVTIGSWMLAMNVNH 181
           +EP S LLG +YFLHAYGPIY             RNNSFRMFSNEDVTIG+WMLAMNVNH
Sbjct: 428 YEPLSNLLGKEYFLHAYGPIYALSADVXSSLVALRNNSFRMFSNEDVTIGAWMLAMNVNH 607

                               
Query: 182 ENTHALCEPDCTESSIAVWD 241
           EN H LC   CT +SIA WD
Sbjct: 608 ENIHELCSXXCTSTSIAGWD 667




 Score =  110 bits (235), Expect = 2e-023
 Identities = 53/81 (65%), Positives = 61/81 (75%)
 Frame = -2 / -1

                                                                       
Query: 243 MSQTAIEDSVQSGSQSACVFSWLTFIASIHDPIVTSSLLNIRKLLFRNATKLATTSADKA 64
           +SQ AI+  V    QS+ +FSWLTFIASI  P+VTSSLLNIRKLLF  ATKL  TSA++A
Sbjct: 669 ISQPAIDVDVHXXEQSS*IFSWLTFIASIQAPMVTSSLLNIRKLLFLRATKLDXTSAERA 490

                                
Query: 63  *IGPYA*RKYCDPSKKDWGSW 1
            IGP A*RKY  PSK D GS+
Sbjct: 489 YIGP*A*RKYSFPSKLDNGSY 427



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 702,508,265
Number of Sequences: 392609
Number of extensions: 9983328
Number of successful extensions: 48995
Number of sequences better than 1.0e-020: 4
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 21049255315
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)