TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4534747.2.1
(628 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC132565.28| Medicago truncatula clone mth2-4a8, complet... 159 1e-066
gb|AC141866.11| Medicago truncatula clone mth2-12p22, compl... 159 1e-062
gb|CA922543.1|CA922543 EST640261 MTUS Medicago truncatula c... 159 1e-062
gb|BI272382.1|BI272382 NF023C12FL1F1097 Developing flower M... 159 1e-062
gb|BQ165763.1|BQ165763 EST611632 KVKC Medicago truncatula c... 158 7e-061
gb|CA858134.1|CA858134 EST635389 GLSD Medicago truncatula c... 153 1e-058
gb|BI308545.1|BI308545 EST529955 GPOD Medicago truncatula c... 150 1e-057
gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone m... 144 2e-056
gb|AC170988.4| Medicago truncatula chromosome 7 clone mth2-... 144 2e-056
gb|BI272105.1|BI272105 NF020G11FL1F1087 Developing flower M... 136 2e-054
gb|AC144723.5| Medicago truncatula clone mth2-7h1, WORKING ... 136 4e-054
gb|CX519351.1|CX519351 s13dNF45G11VI088_442754 Virus-Infect... 159 2e-052
gb|AC152067.21| Medicago truncatula clone mth2-22g24, compl... 144 9e-050
gb|AC161106.12| Medicago truncatula clone mth2-168f23, WORK... 193 2e-048
gb|AW980710.1|AW980710 EST391863 GVN Medicago truncatula cD... 134 3e-047
gb|CX523150.1|CX523150 s13dNF80C08VI066_472104 Virus-Infect... 159 4e-042
gb|BQ122173.1|BQ122173 EST607749 GLSD Medicago truncatula c... 150 7e-042
gb|CX520726.1|CX520726 s13dNF62C10VI072_449238 Virus-Infect... 159 5e-041
gb|CG938983.1|CG938983 MBELR34TR mth2 Medicago truncatula g... 158 7e-038
gb|CA919503.1|CA919503 EST637221 MTUS Medicago truncatula c... 97 2e-035
gb|BG453827.1|BG453827 NF095C03LF1F1019 Developing leaf Med... 101 2e-032
emb|CR350249.1| mte1-85M7RM1 BAC end, cultivar Jemalong A17... 99 2e-031
gb|BE202836.1|BE202836 EST402858 KV1 Medicago truncatula cD... 101 2e-029
gb|BG645947.1|BG645947 EST507566 KV3 Medicago truncatula cD... 95 2e-028
gb|BG448346.1|BG448346 NF070C12EC1F1087 Elicited cell cultu... 126 3e-028
gb|CX516832.1|CX516832 s13dNF08H07VI064_390673 Virus-Infect... 125 8e-028
gb|BF636059.1|BF636059 NF066F08DT1F1074 Drought Medicago tr... 75 9e-028
gb|BF639193.1|BF639193 NF094G11PL1F1086 Phosphate starved l... 123 2e-027
gb|CA923161.1|CA923161 EST640879 MTUS Medicago truncatula c... 97 5e-023
gb|AC158377.1| Medicago truncatula chromosome 2 clone mth2-... 95 4e-022
gb|BG648494.1|BG648494 EST510113 HOGA Medicago truncatula c... 95 5e-022
gb|BG647486.1|BG647486 EST509105 HOGA Medicago truncatula c... 95 5e-022
gb|BE323404.2|BE323404 NF003F01PL1F1011 Phosphate starved l... 105 7e-022
gb|AC148218.7| Medicago truncatula clone mth2-21j14, WORKIN... 62 7e-021
gb|AL372911.1|AL372911 MtBA54D11R1 MtBA Medicago truncatula... 101 8e-021
>gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete sequence
Length = 134155
Score = 159 bits (341), Expect(2) = 1e-066
Identities = 64/89 (71%), Positives = 72/89 (80%)
Frame = +2 / -2
Query: 23 DGSLQLEFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPF 202
+G+ E AEPT+ RS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELLHG TPF
Sbjct: 34998 NGNRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGATPF 34819
Query: 203 KGDSNRATLCNVVDQPLRFPDATPPVPVS 289
KG +ATL NVV QPLRFPD+ PV+
Sbjct: 34818 KGAGYKATLFNVVGQPLRFPDSPQISPVA 34732
Score = 119 bits (255), Expect(2) = 8e-039
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = -2 / +2
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN +G TTL SVA +PL GV P SSY+ +PKVHQSTALP PSPL ISGARYSCVP
Sbjct: 34757 SGNLNGCPTTLKSVALYPAPLKGVAPCNSSYKNIPKVHQSTALPCPSPLMISGARYSCVP 34936
Query: 84 TNDVDRASVGSALNS 40
TND+D VGSA++S
Sbjct: 34937 TNDIDLTLVGSAISS 34981
Score = 115 bits (246), Expect(2) = 1e-066
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +2 / -2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
+S VA+DLIRGLL+K+PQKRIA +RGA EIKQHPFF+GVNWALVR A PP +PD D +
Sbjct: 34746 ISPVAKDLIRGLLIKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSATPPHIPDAIDFSK 34567
Query: 464 VASKE 478
A KE
Sbjct: 34566 YAKKE 34552
Score = 62.0 bits (129), Expect(2) = 8e-039
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -2 / +2
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVL 286
Q TPSKNGCC IS APLL AILF GS +P +RS AT L
Sbjct: 34625 QFTPSKNGCCFISVAPLLYAILF*GSLINNPLIRSLATGL 34744
>gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete sequence
Length = 126907
Score = 159 bits (342), Expect(2) = 1e-062
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / -3
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWT+GIFLYELL G TPFKG NR
Sbjct: 34739 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNR 34560
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP+A
Sbjct: 34559 ATLFNVVGQPLRFPEA 34512
Score = 128 bits (275), Expect(2) = 2e-040
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = -2 / +1
Query: 267 ASGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCV 88
ASGNRSG TTL+SVAR PLNGV+P +SYRK+P VHQSTALP PSPL ISGARYS V
Sbjct: 34513 ASGNRSG*PTTLNSVARFPDPLNGVLPNNNSYRKIP*VHQSTALP*PSPLIISGARYS*V 34692
Query: 87 PTNDVDRASVGSALNS 40
PTND++RASVGSA++S
Sbjct: 34693 PTNDIERASVGSAMSS 34740
Score = 101 bits (216), Expect(2) = 1e-062
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2 / -3
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A +RGA EIKQHPFF+GVNWAL+R A PP +P + +
Sbjct: 34505 VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEK 34326
Query: 464 VAS 472
+ S
Sbjct: 34325 IPS 34317
Score = 57.9 bits (120), Expect(2) = 2e-040
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2 / +1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCCLIS APLL A L GSFT P +RS A LT
Sbjct: 34384 QFTPSKKGCCLISVAPLL*ANLC*GSFTSKPLIRSLAAKLT 34506
>gb|CA922543.1|CA922543 EST640261 MTUS Medicago truncatula cDNA clone MTUS-55A10, mRNA
sequence
Length = 751
Score = 159 bits (342), Expect(2) = 1e-062
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / -1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWT+GIFLYELL G TPFKG NR
Sbjct: 655 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNR 476
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP+A
Sbjct: 475 ATLFNVVGQPLRFPEA 428
Score = 128 bits (275), Expect(2) = 3e-040
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = -2 / +3
Query: 267 ASGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCV 88
ASGNRSG TTL+SVAR PLNGV+P +SYRK+P VHQSTALP PSPL ISGARYS V
Sbjct: 429 ASGNRSG*PTTLNSVARFPDPLNGVLPNNNSYRKIP*VHQSTALP*PSPLIISGARYS*V 608
Query: 87 PTNDVDRASVGSALNS 40
PTND++RASVGSA++S
Sbjct: 609 PTNDIERASVGSAMSS 656
Score = 101 bits (216), Expect(2) = 1e-062
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2 / -1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A +RGA EIKQHPFF+GVNWAL+R A PP +P + +
Sbjct: 421 VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEK 242
Query: 464 VAS 472
+ S
Sbjct: 241 IPS 233
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2 / +3
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCCLIS APLL A L GSFT P +RS A LT
Sbjct: 300 QFTPSKKGCCLISVAPLL*ANLC*GSFTSKPLIRSLAAKLT 422
>gb|BI272382.1|BI272382 NF023C12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF023C12FL 5', mRNA sequence
Length = 652
Score = 159 bits (342), Expect(2) = 1e-062
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / +2
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWT+GIFLYELL G TPFKG NR
Sbjct: 110 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNR 289
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP+A
Sbjct: 290 ATLFNVVGQPLRFPEA 337
Score = 128 bits (275), Expect(2) = 3e-040
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = -2 / -2
Query: 267 ASGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCV 88
ASGNRSG TTL+SVAR PLNGV+P +SYRK+P VHQSTALP PSPL ISGARYS V
Sbjct: 336 ASGNRSG*PTTLNSVARFPDPLNGVLPNNNSYRKIP*VHQSTALP*PSPLIISGARYS*V 157
Query: 87 PTNDVDRASVGSALNS 40
PTND++RASVGSA++S
Sbjct: 156 PTNDIERASVGSAMSS 109
Score = 101 bits (216), Expect(2) = 1e-062
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2 / +2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A +RGA EIKQHPFF+GVNWAL+R A PP +P + +
Sbjct: 344 VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEK 523
Query: 464 VAS 472
+ S
Sbjct: 524 IPS 532
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2 / -2
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCCLIS APLL A L GSFT P +RS A LT
Sbjct: 465 QFTPSKKGCCLISVAPLL*ANLC*GSFTSKPLIRSLAAKLT 343
>gb|BQ165763.1|BQ165763 EST611632 KVKC Medicago truncatula cDNA clone pKVKC-11E5, mRNA
sequence
Length = 668
Score = 158 bits (339), Expect(2) = 7e-061
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = +2 / -2
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPT+ARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELL G TPFKG +NR
Sbjct: 637 ELMAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANR 458
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP++
Sbjct: 457 ATLFNVVGQPLRFPES 410
Score = 123 bits (263), Expect(2) = 2e-034
Identities = 51/75 (68%), Positives = 60/75 (80%)
Frame = -2 / +3
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN G TTL+ VAR PLNGV+P +SSY+ +P VHQSTALP PSPL ISGA+YSCVP
Sbjct: 414 SGNLKGCPTTLNKVARFAEPLNGVLPNKSSYKNIPNVHQSTALP*PSPLMISGAKYSCVP 593
Query: 84 TNDVDRASVGSALNS 40
T D+DRA VGSA++S
Sbjct: 594 TKDIDRAFVGSAISS 638
Score = 97.3 bits (206), Expect(2) = 7e-061
Identities = 40/56 (71%), Positives = 44/56 (78%)
Frame = +2 / -2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPA 451
VS ARDLIRGLLVK+PQ R+A RRGA EIKQHPFF +NWAL+R A PP VP A
Sbjct: 403 VSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNINWALIRCATPPEVPRQA 236
Score = 43.7 bits (89), Expect(2) = 2e-034
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = -2 / +3
Query: 390 KNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
KNGCC IS AP L A GSFT P ++S A LT
Sbjct: 297 KNGCCFISVAPRLYARRC*GSFTSKPLIKSLAAKLT 404
>gb|CA858134.1|CA858134 EST635389 GLSD Medicago truncatula cDNA clone pGLSD-27I3, mRNA
sequence
Length = 500
Score = 153 bits (329), Expect(2) = 1e-058
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = +2 / +3
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPT+ARS SFVGTHEYLAPEI++GE HGSAVDWWTFGIFLYELL GTTPFKG +N+
Sbjct: 81 ELMAEPTNARSMSFVGTHEYLAPEIIKGECHGSAVDWWTFGIFLYELLFGTTPFKGSANQ 260
Query: 221 ATLCNVVDQPLRFP 262
ATL NVV QPLRFP
Sbjct: 261 ATLFNVVGQPLRFP 302
Score = 114 bits (244), Expect(2) = 7e-032
Identities = 49/74 (66%), Positives = 57/74 (77%)
Frame = -2 / -2
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
GN G TTL+ VA PLNGVVP +SSY+ +P VHQSTALP SPL ISGA+YSCVPT
Sbjct: 301 GNLKGCPTTLNKVA*FAEPLNGVVPNKSSYKNIPNVHQSTALP*HSPLMISGAKYSCVPT 122
Query: 81 NDVDRASVGSALNS 40
D+DRA VGSA++S
Sbjct: 121 KDIDRAFVGSAISS 80
Score = 94.5 bits (200), Expect(2) = 1e-058
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +2 / +3
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPA 451
VS ARDLI GLLVK+PQ R+A RRGA EIKQHPFF +NWAL+R A PP VP A
Sbjct: 315 VSFAARDLIMGLLVKEPQHRLAYRRGATEIKQHPFFQNINWALIRCATPPEVPRQA 482
Score = 43.7 bits (89), Expect(2) = 7e-032
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = -2 / -2
Query: 390 KNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
KNGCC IS AP L A GSFT +P ++S A LT
Sbjct: 421 KNGCCFISVAPRLYARRC*GSFTSNPIIKSLAAKLT 314
>gb|BI308545.1|BI308545 EST529955 GPOD Medicago truncatula cDNA clone pGPOD-7M21 5' end,
mRNA sequence
Length = 766
Score = 150 bits (322), Expect(2) = 1e-057
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = +2 / +3
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPT ARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFL+ELL+G TPFKG NR
Sbjct: 264 ELLAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNR 443
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV Q L+FP++
Sbjct: 444 ATLFNVVGQQLKFPES 491
Score = 111 bits (237), Expect(2) = 7e-034
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = -2 / -1
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN S TTL+SVAR PL GV+P+ +S +K+P VHQSTALP PSPL ISGARYS VP
Sbjct: 487 SGNLSCCPTTLNSVARFPDPLKGVLPYNNSCKKIPNVHQSTALP*PSPLIISGARYS*VP 308
Query: 84 TNDVDRASVGSALNS 40
T D+DRA VGSA +S
Sbjct: 307 TKDIDRAVVGSARSS 263
Score = 94.1 bits (199), Expect(2) = 1e-057
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +2 / +3
Query: 287 STVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPAD 454
S +RDLIRGLL K+PQ R+ +RGA E+KQHPFF+GVNWAL+R + PP +P P +
Sbjct: 501 SYASRDLIRGLLAKEPQNRLGVKRGATELKQHPFFEGVNWALIRCSTPPEIPRPME 668
Score = 53.8 bits (111), Expect(2) = 7e-034
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = -2 / -1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSR 298
Q TPSK GCCL S APL F GSF PR+RSR
Sbjct: 619 QFTPSKKGCCLSSVAPLFTPRRFCGSFASKPRIRSR 512
>gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-71n23, complete sequence
Length = 125195
Score = 144 bits (310), Expect(2) = 2e-056
Identities = 56/72 (77%), Positives = 62/72 (86%)
Frame = +2 / +2
Query: 50 AEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATL 229
AEPTDARS SFVGTHEYLAPEI++ EGHG+AVDWWTFG+FLYELL+G TPFKG +N TL
Sbjct: 120515 AEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETL 120694
Query: 230 CNVVDQPLRFPD 265
NVV Q L FPD
Sbjct: 120695 ANVVLQSLGFPD 120730
Score = 105 bits (223), Expect(2) = 5e-032
Identities = 46/73 (63%), Positives = 55/73 (75%)
Frame = -2 / -3
Query: 267 ASGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCV 88
+SGN +TT +V+ LL PL GV+P++SS RK P VHQSTA P PS L ISGA+YSCV
Sbjct: 120732 SSGNPRLCNTTFANVSSLLEPLKGVLPYKSS*RKTPNVHQSTAAPCPSSLMISGAKYSCV 120553
Query: 87 PTNDVDRASVGSA 49
PTN+ D ASVGSA
Sbjct: 120552 PTNEFDLASVGSA 120514
Score = 95.5 bits (202), Expect(2) = 2e-056
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +2 / +2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLG 460
VS A+DLIRGLLVK+P+ R+ +++GAAEIKQHPFF+G+NWAL+R PP +P+ D G
Sbjct: 120740 VSFEAKDLIRGLLVKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCTIPPELPEFCDFG 120916
Score = 53.8 bits (111), Expect(2) = 5e-032
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = -2 / -3
Query: 459 PKXXXXXXXXXXXXXXXAQLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
PK AQL PSK GCCLISAAP F GS T +P +RS A+ LT
Sbjct: 120915 PKSQNSGSSGGIVQRIKAQLRPSKKGCCLISAAPFCEPKRFSGSLTNNPLIRSLASKLT 120739
>gb|AC170988.4| Medicago truncatula chromosome 7 clone mth2-53m12, *** SEQUENCING IN
PROGRESS ***
Length = 122501
Score = 144 bits (310), Expect(2) = 2e-056
Identities = 56/72 (77%), Positives = 62/72 (86%)
Frame = +2 / +1
Query: 50 AEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATL 229
AEPTDARS SFVGTHEYLAPEI++ EGHG+AVDWWTFG+FLYELL+G TPFKG +N TL
Sbjct: 16810 AEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETL 16989
Query: 230 CNVVDQPLRFPD 265
NVV Q L FPD
Sbjct: 16990 ANVVLQSLGFPD 17025
Score = 105 bits (223), Expect(2) = 5e-032
Identities = 46/73 (63%), Positives = 55/73 (75%)
Frame = -2 / -1
Query: 267 ASGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCV 88
+SGN +TT +V+ LL PL GV+P++SS RK P VHQSTA P PS L ISGA+YSCV
Sbjct: 17027 SSGNPRLCNTTFANVSSLLEPLKGVLPYKSS*RKTPNVHQSTAAPCPSSLMISGAKYSCV 16848
Query: 87 PTNDVDRASVGSA 49
PTN+ D ASVGSA
Sbjct: 16847 PTNEFDLASVGSA 16809
Score = 95.5 bits (202), Expect(2) = 2e-056
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +2 / +1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLG 460
VS A+DLIRGLLVK+P+ R+ +++GAAEIKQHPFF+G+NWAL+R PP +P+ D G
Sbjct: 17035 VSFEAKDLIRGLLVKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCTIPPELPEFCDFG 17211
Score = 53.8 bits (111), Expect(2) = 5e-032
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = -2 / -1
Query: 459 PKXXXXXXXXXXXXXXXAQLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
PK AQL PSK GCCLISAAP F GS T +P +RS A+ LT
Sbjct: 17210 PKSQNSGSSGGIVQRIKAQLRPSKKGCCLISAAPFCEPKRFSGSLTNNPLIRSLASKLT 17034
>gb|BI272105.1|BI272105 NF020G11FL1F1087 Developing flower Medicago truncatula cDNA clone
NF020G11FL 5', mRNA sequence
Length = 645
Score = 136 bits (291), Expect(2) = 2e-054
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = +2 / +2
Query: 53 EPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLC 232
EPT+ARS SFVGT+EYLAPEI++ EGHG+AVDWWTFGIFL+ELL+G TPFKG SN TL
Sbjct: 146 EPTNARSNSFVGTYEYLAPEIIKSEGHGNAVDWWTFGIFLFELLYGKTPFKGPSNDDTLS 325
Query: 233 NVVDQPLRFP 262
NVV + L+FP
Sbjct: 326 NVVSESLKFP 355
Score = 97.7 bits (207), Expect(2) = 2e-054
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2 / +2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLL+KDP+ R+ + +GAAEIKQHPFF+G+NWAL+R A PP +P D G
Sbjct: 368 VSFHARDLIRGLLIKDPENRLGSIKGAAEIKQHPFFEGLNWALIRXAAPPELPKFRDFGT 547
Query: 464 VA 469
A
Sbjct: 548 SA 553
Score = 89.0 bits (188), Expect(2) = 4e-026
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = -2 / -1
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
GN TT +V+ PL GV P++SS + +PKVHQSTA P PS L ISGARYS VPT
Sbjct: 354 GNLRLSDTTFDNVSSFDGPLKGVFPYKSSNKNIPKVHQSTAFPCPSLLMISGARYSYVPT 175
Query: 81 NDVDRASVGS 52
++DRA VGS
Sbjct: 174 KELDRALVGS 145
Score = 50.1 bits (103), Expect(2) = 4e-026
Identities = 26/59 (44%), Positives = 30/59 (50%)
Frame = -2 / -1
Query: 459 PKXXXXXXXXXXXXXXXAQLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
PK AQL PSK GCC ISAAP + F GSF +P ++S A LT
Sbjct: 543 PKSRNLGSSGGAAXRIRAQLRPSKKGCCFISAAPFIEPNRFSGSFINNPLIKSLA*KLT 367
>gb|AC144723.5| Medicago truncatula clone mth2-7h1, WORKING DRAFT SEQUENCE, 18
unordered pieces
Length = 64100
Score = 136 bits (291), Expect(2) = 4e-054
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = +2 / +2
Query: 53 EPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLC 232
EPT+ARS SFVGT+EYLAPEI++ EGHG+AVDWWTFGIFL+ELL+G TPFKG SN TL
Sbjct: 50966 EPTNARSNSFVGTYEYLAPEIIKSEGHGNAVDWWTFGIFLFELLYGKTPFKGPSNDDTLS 51145
Query: 233 NVVDQPLRFP 262
NVV + L+FP
Sbjct: 51146 NVVSESLKFP 51175
Score = 96.8 bits (205), Expect(2) = 4e-054
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2 / +2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLL+KDP+ R+ + +GAAEIKQHPFF+G+NWAL+R A PP +P D G
Sbjct: 51188 VSFHARDLIRGLLIKDPENRLGSIKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGT 51367
Query: 464 VA 469
A
Sbjct: 51368 SA 51373
Score = 89.0 bits (188), Expect(2) = 4e-026
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = -2 / -3
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
GN TT +V+ PL GV P++SS + +PKVHQSTA P PS L ISGARYS VPT
Sbjct: 51174 GNLRLSDTTFDNVSSFDGPLKGVFPYKSSNKNIPKVHQSTAFPCPSLLMISGARYSYVPT 50995
Query: 81 NDVDRASVGS 52
++DRA VGS
Sbjct: 50994 KELDRALVGS 50965
Score = 50.1 bits (103), Expect(2) = 4e-026
Identities = 25/59 (42%), Positives = 29/59 (49%)
Frame = -2 / -3
Query: 459 PKXXXXXXXXXXXXXXXAQLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
PK AQL PSK GCC ISAAP + F GSF +P ++S A LT
Sbjct: 51363 PKSRNLGSSGGAAHRIRAQLRPSKKGCCFISAAPFIEPNRFSGSFINNPLIKSLA*KLT 51187
>gb|CX519351.1|CX519351 s13dNF45G11VI088_442754 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 602
Score = 159 bits (342), Expect(2) = 2e-052
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / +1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWT+GIFLYELL G TPFKG NR
Sbjct: 259 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNR 438
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP+A
Sbjct: 439 ATLFNVVGQPLRFPEA 486
Score = 128 bits (275), Expect(2) = 5e-038
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = -2 / -1
Query: 267 ASGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCV 88
ASGNRSG TTL+SVAR PLNGV+P +SYRK+P VHQSTALP PSPL ISGARYS V
Sbjct: 485 ASGNRSG*PTTLNSVARFPDPLNGVLPNNNSYRKIP*VHQSTALP*PSPLIISGARYS*V 306
Query: 87 PTNDVDRASVGSALNS 40
PTND++RASVGSA++S
Sbjct: 305 PTNDIERASVGSAMSS 258
Score = 68.0 bits (142), Expect(2) = 2e-052
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +2 / +1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFF 391
VS ARDLIRGLLVK+PQ R+A +RGA EIKQHPFF
Sbjct: 493 VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 600
Score = 50.1 bits (103), Expect(2) = 5e-038
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -2 / -1
Query: 393 SKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
SK GCCLIS APLL A L GSFT P +RS A LT
Sbjct: 602 SKKGCCLISVAPLL*ANLC*GSFTSKPLIRSLAAKLT 492
>gb|AC152067.21| Medicago truncatula clone mth2-22g24, complete sequence
Length = 86972
Score = 144 bits (309), Expect(2) = 9e-050
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = +2 / +3
Query: 32 LQLEFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGD 211
L +F AEP +ARS SFVGTHEYLAPE++ G+GHGSAVDWWTFG+FLYE+L+G TPFKG+
Sbjct: 21240 LDPDFVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGE 21419
Query: 212 SNRATLCNVVDQPLRFP 262
+N TL N++ QPL FP
Sbjct: 21420 NNEKTLVNILKQPLTFP 21470
Score = 100 bits (214), Expect(2) = 2e-026
Identities = 44/74 (59%), Positives = 50/74 (67%)
Frame = -2 / -2
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
G G L +V L SPLNGV+P+ SY+K P VHQSTALP P P SGA+YSCVPT
Sbjct: 21469 GKVKGCLRMLTNVFSLFSPLNGVLPYNISYKKTPNVHQSTALP*PCPNITSGAKYSCVPT 21290
Query: 81 NDVDRASVGSALNS 40
ND D AS+GSA S
Sbjct: 21289 NDFDLASIGSATKS 21248
Score = 73.9 bits (155), Expect(2) = 9e-050
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +3
Query: 299 RDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVP 442
+DLI LLVK+P KRI + G+ EIK+H FF GVNWAL+R PP VP
Sbjct: 21519 QDLISKLLVKNPSKRIGSCLGSVEIKRHEFFKGVNWALIRSVRPPEVP 21662
Score = 39.1 bits (79), Expect(2) = 2e-026
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2 / -2
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRS 301
QLTP KN C LIS P + IL G FT + +RS
Sbjct: 21625 QLTPLKNSCLLISTEPKQLPILLLGFFTNNLLIRS 21521
>gb|AC161106.12| Medicago truncatula clone mth2-168f23, WORKING DRAFT SEQUENCE, 2
ordered pieces
Length = 94880
Score = 193 bits (417), Expect = 2e-048
Identities = 75/133 (56%), Positives = 97/133 (72%)
Frame = +2 / -1
Query: 44 FNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRA 223
F AEP ARS SFVGTHEY++PE+ G HG+AVDWW+FGIF+YEL++G TPF SN+
Sbjct: 66908 FVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELVYGRTPFAAPSNKE 66729
Query: 224 TLCNVVDQPLRFPDATPPVPVSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVN 403
TL N++ +PL FP T + ARDLI GLL KDP +R+ ++RG+A++KQH FF G+N
Sbjct: 66728 TLRNILKKPLTFPTPTASSALELHARDLISGLLNKDPTQRLGSKRGSADVKQHSFFKGIN 66549
Query: 404 WALVRDAHPPSVP 442
AL+R PP VP
Sbjct: 66548 LALIRMLTPPEVP 66510
>gb|AW980710.1|AW980710 EST391863 GVN Medicago truncatula cDNA clone pGVN-55P21, mRNA
sequence
Length = 651
Score = 134 bits (287), Expect(2) = 3e-047
Identities = 52/74 (70%), Positives = 58/74 (78%)
Frame = +2 / +1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
EF AEP D RS SFVGTHEYLAPEIV GEGHGSAVDWWT GIF++EL +G TPF+G N
Sbjct: 34 EFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGLDNE 213
Query: 221 ATLCNVVDQPLRFP 262
TL N+V + L FP
Sbjct: 214 LTLANIVARALEFP 255
Score = 93.6 bits (198), Expect(2) = 4e-023
Identities = 43/74 (58%), Positives = 49/74 (66%)
Frame = -2 / -2
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
GN +T V L PL GV P +S +PKVHQSTALP PSP TISGA+YS VPT
Sbjct: 254 GNSKARATIFARVNSLSKPLKGVTP*NNSNINIPKVHQSTALPCPSPDTISGAKYSWVPT 75
Query: 81 NDVDRASVGSALNS 40
ND+D S+GSA NS
Sbjct: 74 NDMDLTSMGSATNS 33
Score = 75.8 bits (159), Expect(2) = 3e-047
Identities = 31/55 (56%), Positives = 37/55 (67%)
Frame = +2 / +1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDP 448
V A+DLI LLVKDP +R+ + GA+ IK H FF GVNWAL+R PP VP P
Sbjct: 268 VPATAKDLISQLLVKDPSRRLGSIMGASAIKHHSFFQGVNWALLRCTTPPYVPPP 432
Score = 35.4 bits (71), Expect(2) = 4e-023
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2 / -2
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TP KN CLI+ AP++ L GS T + +RS A T
Sbjct: 389 QFTP*KNEWCLIAEAPIIDPSLLDGSLTNNCEIRSFAVAGT 267
>gb|CX523150.1|CX523150 s13dNF80C08VI066_472104 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 544
Score = 159 bits (342), Expect(2) = 4e-042
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / +1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWT+GIFLYELL G TPFKG NR
Sbjct: 259 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNR 438
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP+A
Sbjct: 439 ATLFNVVGQPLRFPEA 486
Score = 128 bits (275), Expect = 6e-029
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = -2 / -3
Query: 267 ASGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCV 88
ASGNRSG TTL+SVAR PLNGV+P +SYRK+P VHQSTALP PSPL ISGARYS V
Sbjct: 485 ASGNRSG*PTTLNSVARFPDPLNGVLPNNNSYRKIP*VHQSTALP*PSPLIISGARYS*V 306
Query: 87 PTNDVDRASVGSALNS 40
PTND++RASVGSA++S
Sbjct: 305 PTNDIERASVGSAMSS 258
Score = 33.1 bits (66), Expect(2) = 4e-042
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +1
Query: 284 VSTVARDLIRGLLVKDP 334
VS ARDLIRGLLVK+P
Sbjct: 493 VSFAARDLIRGLLVKEP 543
>gb|BQ122173.1|BQ122173 EST607749 GLSD Medicago truncatula cDNA clone pGLSD-28M11, mRNA
sequence
Length = 724
Score = 150 bits (322), Expect(3) = 7e-042
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = +2 / +2
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPT ARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFL+ELL+G TPFKG NR
Sbjct: 365 ELLAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNR 544
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV Q L+FP++
Sbjct: 545 ATLFNVVGQQLKFPES 592
Score = 111 bits (237), Expect(2) = 5e-025
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = -2 / -2
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN S TTL+SVAR PL GV+P+ +S +K+P VHQSTALP PSPL ISGARYS VP
Sbjct: 588 SGNLSCCPTTLNSVARFPDPLKGVLPYNNSCKKIPNVHQSTALP*PSPLIISGARYS*VP 409
Query: 84 TNDVDRASVGSALNS 40
T D+DRA VGSA +S
Sbjct: 408 TKDIDRAVVGSARSS 364
Score = 36.8 bits (74), Expect(3) = 7e-042
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 287 STVARDLIRGLLVKDPQKRIATRR 358
S +RDLIRGLL K+PQ R+ +R
Sbjct: 602 SYASRDLIRGLLAKEPQNRLGVKR 673
Score = 24.0 bits (46), Expect(2) = 5e-025
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2 / -2
Query: 339 FWGSFTRSPRMRSR 298
F GSF PR+RSR
Sbjct: 654 FCGSFASKPRIRSR 613
Score = 23.1 bits (44), Expect(3) = 7e-042
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +2
Query: 383 PFFDGVNWAL 412
PF GVNWAL
Sbjct: 695 PFL*GVNWAL 724
>gb|CX520726.1|CX520726 s13dNF62C10VI072_449238 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 567
Score = 159 bits (342), Expect(2) = 5e-041
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / +1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWT+GIFLYELL G TPFKG NR
Sbjct: 259 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNR 438
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP+A
Sbjct: 439 ATLFNVVGQPLRFPEA 486
Score = 128 bits (275), Expect = 6e-029
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = -2 / -2
Query: 267 ASGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCV 88
ASGNRSG TTL+SVAR PLNGV+P +SYRK+P VHQSTALP PSPL ISGARYS V
Sbjct: 485 ASGNRSG*PTTLNSVARFPDPLNGVLPNNNSYRKIP*VHQSTALP*PSPLIISGARYS*V 306
Query: 87 PTNDVDRASVGSALNS 40
PTND++RASVGSA++S
Sbjct: 305 PTNDIERASVGSAMSS 258
Score = 29.5 bits (58), Expect(2) = 5e-041
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 284 VSTVARDLIRGLLVKD 331
VS ARDLIRGLLVK+
Sbjct: 493 VSFAARDLIRGLLVKN 540
>gb|CG938983.1|CG938983 MBELR34TR mth2 Medicago truncatula genomic clone 82E20, DNA
sequence
Length = 448
Score = 158 bits (340), Expect = 7e-038
Identities = 64/88 (72%), Positives = 71/88 (80%)
Frame = +2 / +2
Query: 23 DGSLQLEFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPF 202
+G+ E AEPT+ RS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELLHG TPF
Sbjct: 65 NGNRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGATPF 244
Query: 203 KGDSNRATLCNVVDQPLRFPDATPPVPV 286
KG +ATL NVV QPLRFPD+ PV
Sbjct: 245 KGAGYKATLFNVVGQPLRFPDSPSISPV 328
Score = 119 bits (255), Expect = 3e-026
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = -2 / -2
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN +G TTL SVA +PL GV P SSY+ +PKVHQSTALP PSPL ISGARYSCVP
Sbjct: 306 SGNLNGCPTTLKSVALYPAPLKGVAPCNSSYKNIPKVHQSTALPCPSPLMISGARYSCVP 127
Query: 84 TNDVDRASVGSALNS 40
TND+D VGSA++S
Sbjct: 126 TNDIDLTLVGSAISS 82
>gb|CA919503.1|CA919503 EST637221 MTUS Medicago truncatula cDNA clone MTUS-14E5, mRNA
sequence
Length = 646
Score = 96.8 bits (205), Expect(2) = 2e-035
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = +2 / -2
Query: 122 GEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFP 262
G+GHGSAVDWWTFG+FLYE+L+G TPFKG++N TL N++ QPL FP
Sbjct: 639 GQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLTFP 499
Score = 73.9 bits (155), Expect(2) = 2e-035
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / -2
Query: 299 RDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVP 442
+DLI LLVK+P KRI + G+ EIK+H FF GVNWAL+R PP VP
Sbjct: 450 QDLISKLLVKNPSKRIGSCLGSVEIKRHEFFKGVNWALIRSVRPPEVP 307
>gb|BG453827.1|BG453827 NF095C03LF1F1019 Developing leaf Medicago truncatula cDNA clone
NF095C03LF 5', mRNA sequence
Length = 561
Score = 101 bits (216), Expect(3) = 2e-032
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2 / +3
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A +RGA EIKQHPFF+GVNWAL+R A PP +P + +
Sbjct: 123 VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEK 302
Query: 464 VAS 472
+ S
Sbjct: 303 IPS 311
Score = 49.2 bits (101), Expect(3) = 2e-032
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +2
Query: 155 TFGIFLYELLHGTTPFKGDSNRAT 226
T+GIFLYELL G TPFKG NRAT
Sbjct: 2 TYGIFLYELLFGKTPFKGSGNRAT 73
Score = 27.2 bits (53), Expect(3) = 2e-032
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 233 NVVDQPLRFPDA 268
NVV QPLRFP+A
Sbjct: 81 NVVGQPLRFPEA 116
>emb|CR350249.1| mte1-85M7RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 613
Score = 98.7 bits (209), Expect(2) = 2e-031
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +2 / -1
Query: 68 RSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVV 241
RS SFVGT EY++PE+VRG+GH AVDWW GI YE+L+GTTPFKG + + T NV+
Sbjct: 454 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFKNVL 281
Score = 58.3 bits (121), Expect(2) = 2e-031
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2 / -1
Query: 290 TVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPP 433
T DLI LL KDP+KR+ RGA EIK+H FF GV W ++ + P
Sbjct: 250 TELTDLIEKLLEKDPKKRLGYSRGAVEIKEHAFFRGVRWEILTEVIRP 107
>gb|BE202836.1|BE202836 EST402858 KV1 Medicago truncatula cDNA clone pKV1-3M24, mRNA
sequence
Length = 540
Score = 101 bits (216), Expect(2) = 2e-029
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2 / -3
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A +RGA EIKQHPFF+GVNWAL+R A PP +P + +
Sbjct: 460 VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEK 281
Query: 464 VAS 472
+ S
Sbjct: 280 IPS 272
Score = 48.3 bits (99), Expect(2) = 2e-029
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / -3
Query: 197 PFKGDSNRATLCNVVDQPLRFPDA 268
PFKG NRATL NVV QPLRFP+A
Sbjct: 538 PFKGSGNRATLFNVVGQPLRFPEA 467
>gb|BG645947.1|BG645947 EST507566 KV3 Medicago truncatula cDNA clone pKV3-48C23 5' end,
mRNA sequence
Length = 795
Score = 95.0 bits (201), Expect(2) = 2e-028
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +2 / -2
Query: 68 RSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQ 247
+S SFVGT EY+APE++RGEGH AVD+W GI YE+L+G TPFKG + + T NV+ +
Sbjct: 731 KSNSFVGTAEYVAPEVIRGEGHEFAVDFWALGILSYEMLYGKTPFKGKNKKETFSNVLFK 552
Query: 248 PLRF 259
L F
Sbjct: 551 KLEF 540
Score = 51.9 bits (107), Expect(2) = 2e-028
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = +2 / -2
Query: 290 TVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPP 433
T DLI LL KDP KR+ GA EIK+H F GV W ++ + P
Sbjct: 527 TALTDLIERLLEKDPLKRLGYVGGAEEIKEHELFRGVKWEMLTEVERP 384
>gb|BG448346.1|BG448346 NF070C12EC1F1087 Elicited cell culture Medicago truncatula cDNA
clone NF070C12EC 5', mRNA sequence
Length = 541
Score = 126 bits (270), Expect = 3e-028
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +2 / +3
Query: 50 AEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSN 217
AEPTDARS SFVGTHEYLAPEI++GEGHG+AVDWWTFG+FLY LL+G TPFKG +N
Sbjct: 366 AEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYXLLYGXTPFKGSNN 533
>gb|CX516832.1|CX516832 s13dNF08H07VI064_390673 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 302
Score = 125 bits (267), Expect = 8e-028
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = +2 / +3
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKG 208
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWT+GIFLYELL G TPFKG
Sbjct: 108 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKG 275
Score = 101 bits (216), Expect = 8e-021
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -2 / -2
Query: 207 PLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPTNDVDRASVGSALNS 40
PLNGV+P +SYRK+P VHQSTALP PSPL ISGARYS VPTND++RASVGSA++S
Sbjct: 274 PLNGVLPNNNSYRKIP*VHQSTALP*PSPLIISGARYS*VPTNDIERASVGSAMSS 107
>gb|BF636059.1|BF636059 NF066F08DT1F1074 Drought Medicago truncatula cDNA clone NF066F08DT
5', mRNA sequence
Length = 623
Score = 75.3 bits (158), Expect(2) = 9e-028
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2 / +3
Query: 278 VPVSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDP 448
+P S AR LI LL +DP R+ + G+ EIKQHPFF G+NW L+R+ PP + P
Sbjct: 138 IPASLAARQLINALLQRDPASRLGSATGSNEIKQHPFFRGINWPLIRNMSPPPLDVP 308
Score = 69.3 bits (145), Expect(2) = 9e-028
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2 / +3
Query: 137 SAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFPDATP 274
SA+DWWT GI LYE+L+G TPF+G + + T N++ + L FP + P
Sbjct: 6 SAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIP 143
>gb|BF639193.1|BF639193 NF094G11PL1F1086 Phosphate starved leaf Medicago truncatula cDNA
clone NF094G11PL 5', mRNA sequence
Length = 668
Score = 123 bits (264), Expect = 2e-027
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = +2 / +3
Query: 50 AEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATL 229
AEPTDARS SFVGTHEYLAPEI++G GHG+AVDWWTFG+FL LL+G TPFKG +N TL
Sbjct: 489 AEPTDARSNSFVGTHEYLAPEIIKGXGHGAAVDWWTFGVFLXXLLYGXTPFKGSNNEKTL 668
>gb|CA923161.1|CA923161 EST640879 MTUS Medicago truncatula cDNA clone MTUS-63H5, mRNA
sequence
Length = 511
Score = 96.8 bits (205), Expect(2) = 5e-023
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = +2 / -3
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPD 445
VS ARDLI+GLLVK+P+ R+ T +GAAEIKQHPFF+G+NWAL+R A PP +PD
Sbjct: 440 VSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPD 279
Score = 31.8 bits (63), Expect(2) = 5e-023
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 206 GDSNRATLCNVVDQPLRFPDA 268
G +N TL NVV Q LRFPD+
Sbjct: 509 GSNNEETLANVVLQNLRFPDS 447
>gb|AC158377.1| Medicago truncatula chromosome 2 clone mth2-74a13, *** SEQUENCING IN
PROGRESS ***, 12 unordered pieces
Length = 132622
Score = 94.5 bits (200), Expect(2) = 4e-022
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +2 / +1
Query: 68 RSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQ 247
+S SFVGT EY+APEIV G+GHG VDWW+ G+ LYE+L+GTTPF G + + T ++ +
Sbjct: 67240 KSKSFVGTEEYVAPEIVNGKGHGFEVDWWSLGVVLYEMLYGTTPFNGTNRKETFYRILSK 67419
Score = 30.9 bits (61), Expect(2) = 4e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 290 TVARDLIRGLLVKDPQKRI 346
T RDLIR LL KDP +RI
Sbjct: 67444 TALRDLIRRLLEKDPDRRI 67500
>gb|BG648494.1|BG648494 EST510113 HOGA Medicago truncatula cDNA clone pHOGA-19P4 5' end,
mRNA sequence
Length = 773
Score = 94.5 bits (200), Expect(2) = 5e-022
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +2 / +1
Query: 68 RSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQ 247
+S SFVGT EY+APEIV G+GHG VDWW+ G+ LYE+L+GTTPF G + + T ++ +
Sbjct: 235 KSKSFVGTEEYVAPEIVNGKGHGFEVDWWSLGVVLYEMLYGTTPFNGTNRKETFYGILSK 414
Score = 30.9 bits (61), Expect(2) = 5e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 290 TVARDLIRGLLVKDPQKRI 346
T RDLIR LL KDP +RI
Sbjct: 439 TALRDLIRRLLEKDPDRRI 495
>gb|BG647486.1|BG647486 EST509105 HOGA Medicago truncatula cDNA clone pHOGA-17E1 5' end,
mRNA sequence
Length = 724
Score = 94.5 bits (200), Expect(2) = 5e-022
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +2 / +3
Query: 68 RSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQ 247
+S SFVGT EY+APEIV G+GHG VDWW+ G+ LYE+L+GTTPF G + + T ++ +
Sbjct: 321 KSKSFVGTEEYVAPEIVNGKGHGFEVDWWSLGVVLYEMLYGTTPFNGTNRKETFYRILSK 500
Score = 30.9 bits (61), Expect(2) = 5e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 290 TVARDLIRGLLVKDPQKRI 346
T RDLIR LL KDP +RI
Sbjct: 525 TALRDLIRRLLEKDPDRRI 581
>gb|BE323404.2|BE323404 NF003F01PL1F1011 Phosphate starved leaf Medicago truncatula cDNA
clone NF003F01PL 5', mRNA sequence
Length = 296
Score = 105 bits (224), Expect = 7e-022
Identities = 38/44 (86%), Positives = 43/44 (97%)
Frame = +2 / +1
Query: 50 AEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYEL 181
AEPTDARS SFVGTHEYLAPEI++GEGHG+AVDWWTFG+FLY+L
Sbjct: 163 AEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYKL 294
>gb|AC148218.7| Medicago truncatula clone mth2-21j14, WORKING DRAFT SEQUENCE, 7
unordered pieces
Length = 58259
Score = 61.6 bits (128), Expect(4) = 7e-021
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +2 / -2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVR 418
VS A+ LI LL +DP R+ + GA +IK HPFF G+NWALVR
Sbjct: 40186 VSLSAKQLIYRLLQRDPTSRLGSNGGANDIKNHPFFRGINWALVR 40052
Score = 47.8 bits (98), Expect(4) = 7e-021
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +2 / -3
Query: 161 GIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFP 262
GI LYE+++G TPF+G + + T N++ + LRFP
Sbjct: 40581 GILLYEMIYGYTPFRGKNRQRTFANILHKDLRFP 40480
Score = 40.0 bits (81), Expect(4) = 7e-021
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / -1
Query: 101 LAPEIVRGEGHGSAVDWWTFGIFLY 175
L EI+ G GH SAVDWW G F +
Sbjct: 40946 LLQEIITGSGHTSAVDWWALGNFQF 40872
Score = 27.6 bits (54), Expect(4) = 7e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 71 STSFVGTHEYLAP 109
S SFVGT EY+AP
Sbjct: 41126 SNSFVGTEEYIAP 41088
>gb|AL372911.1|AL372911 MtBA54D11R1 MtBA Medicago truncatula cDNA clone MtBA54D11 T7, mRNA
sequence
Length = 534
Score = 101 bits (216), Expect = 8e-021
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2 / +1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A +RGA EIKQHPFF+GVNWAL+R A PP +P + +
Sbjct: 16 VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEK 195
Query: 464 VAS 472
+ S
Sbjct: 196 IPS 204
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 491,903,062
Number of Sequences: 392609
Number of extensions: 5596982
Number of successful extensions: 42553
Number of sequences better than 1.0e-020: 46
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19410690530
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)