TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3871923.2.1
(1030 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI309102.1|BI309102 EST530512 GPOD Medicago truncatula c... 408 e-113
gb|AC146331.35| Medicago truncatula clone mth2-7h18, comple... 129 5e-070
gb|AC121245.17| Medicago truncatula clone mth2-33g3, comple... 190 4e-061
gb|AC174344.6| Medicago truncatula clone mth2-167b8, WORKIN... 180 1e-060
emb|CR326732.1| mte1-55E9FM1 BAC end, cultivar Jemalong A17... 159 1e-046
emb|CR341804.1| mte1-74E10RM1 BAC end, cultivar Jemalong A1... 182 8e-045
emb|CR505658.1| mth4-39D16FM1 BAC end, cultivar Jemalong A1... 151 6e-042
emb|CR323785.1| mte1-50N19RM1 BAC end, cultivar Jemalong A1... 119 6e-026
gb|CG973882.1|CG973882 MBENH45TR mth2 Medicago truncatula g... 95 2e-021
emb|CR503175.1| mth2-180D10FM1 BAC end, cultivar Jemalong A... 95 2e-021
>gb|BI309102.1|BI309102 EST530512 GPOD Medicago truncatula cDNA clone pGPOD-10N9 5' end,
mRNA sequence
Length = 683
Score = 408 bits (886), Expect = e-113
Identities = 164/212 (77%), Positives = 181/212 (85%)
Frame = +2 / +1
Query: 92 CIGTIYLDVGTKYTSILARAACSAFVFGFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVA 271
CIGTIYL+VGT Y SILAR +C++FVFGFVTFMSIGGFPSFVE+MKVFQRERLNGHYGV
Sbjct: 46 CIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVT 225
Query: 272 AFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLYASVTVVESLMMAIA 451
AFVISNT+SATPFLILI FLSGTICYFMV LHPGF HY+FFVL LYASVTVVESLMMAIA
Sbjct: 226 AFVISNTLSATPFLILITFLSGTICYFMVNLHPGFSHYVFFVLALYASVTVVESLMMAIA 405
Query: 452 SVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQCQNDM 631
S++PNFLM FMLVSGYF+LP+DIPKP WRYPM YISFHYWALQGQ QND+
Sbjct: 406 SIVPNFLMGIIIGAGIQGIFMLVSGYFKLPHDIPKPVWRYPMSYISFHYWALQGQYQNDL 585
Query: 632 KGLAVDNQDPDQPKIPGDFILKYIFQINVDRS 727
+GL D + PD PKI G++ILKY+F I V RS
Sbjct: 586 RGLLFDGETPDMPKIAGEYILKYVFPITVTRS 681
Score = 182 bits (392), Expect(2) = 2e-067
Identities = 88/136 (64%), Positives = 100/136 (73%)
Frame = -2 / -1
Query: 471 RKFGMTLAIAIIKLSTTVTLAYRFKTKKM*CSKPGWRRTMK*HMVPDKKHIRIRNGVAEM 292
RK G LAIAIIKLSTTVTLA R TKK * PG R TMK* +VP++K I +RNGVA+
Sbjct: 425 RKLGTILAIAIIKLSTTVTLA*RASTKKT**ENPGCRLTMK*QIVPERKVINMRNGVADN 246
Query: 291 VLLMTNAATP*CPFSRSRWKTFISSTNEGNPPMDMNVTNPKTNAEQAALARMDVYLVPTS 112
VLL+TNA TP*CPFS S KTFISSTNEGNPP+DM VTNP T LAR+++ VPT
Sbjct: 245 VLLITNAVTP*CPFSLSL*KTFISSTNEGNPPIDMKVTNPNTKDAHEPLARIEL*PVPTF 66
Query: 111 R*IVPMQTVTRR*XXS 64
+*+VPMQ VT * S
Sbjct: 65 K*MVPMQIVTTM*ITS 18
Score = 147 bits (315), Expect = 3e-034
Identities = 62/167 (37%), Positives = 100/167 (59%)
Frame = +1 / +3
Query: 127 IHIHPGQGCLLRVRLWVRYVHVHWRIPFVR*RNEGLPAGTAERALRCRGVCHQQHHLSHA 306
+ ++ G G + +W+ ++HV+W IPFV *R EG G A+ L C +C+ QH + +
Sbjct: 81 LQLNSG*GFMCIFCVWICHLHVNWWIPFVC*RYEGFSKGEAKWTLWCDCICY*QHIICNT 260
Query: 307 VPDSDMLLVGNHMLLHGAPPSWLRALHLLRLEPVRQRYGGRELDDGDCQCHSKFPHGYHH 486
+ + + N++LLHG P SW+ +L L P+ + + +L+DG+C S PHG++H
Sbjct: 261 ISHINHFSLWNNLLLHG*PTSWIFSLRFLCAGPLCKCHSC*KLNDGNC*YCS*LPHGHYH 440
Query: 487 RGRDSGNIHAGLWLLQTSIRHPEALLEIPHAVHQLPLLGTAGPVPER 627
R+S +H GLWLL +P+A L + + +HQ PLLG GP+P+R
Sbjct: 441 WSRNSRYLHVGLWLL*APT*YPKACLALSNVIHQFPLLGITGPIPKR 581
Score = 95.9 bits (203), Expect(2) = 2e-067
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = -2 / -1
Query: 717 TLIWKMYLRMKSPGILGWSGSWLSTARPFMSFWHWPCSAQ*WKLMYCMGYLQKGFGMSYG 538
T+I Y +M SP I G SG S +P SFW+WPC+AQ*WKLMY +G Q GFG+S G
Sbjct: 671 TVIGNTYFKMYSPAIFGISGVSPSNNKPLRSFWYWPCNAQ*WKLMYDIG*RQTGFGISCG 492
Query: 537 SLK*PETS 514
SLK*PET+
Sbjct: 491 SLK*PETN 468
Score = 88.1 bits (186), Expect(2) = 2e-030
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = -1 / -3
Query: 628 VVLALALQCPVVEADVLHGVSPKGLRDVVWKSEVARDQHEYSLNPGPYDDTHEEIWNDTG 449
+VL LAL CP+VE DV H ++P L D++W+ +VARDQHE +LN D+ HEE+ N+T
Sbjct: 582 IVLVLAL*CPIVETDV*HWITPNRLWDIMWELKVARDQHEDTLNSCSNDNAHEEVRNNTS 403
Query: 448 NRHHQALDH 422
N HH A ++
Sbjct: 402 NCHH*AFNN 376
Score = 68.9 bits (144), Expect(2) = 2e-030
Identities = 29/73 (39%), Positives = 50/73 (68%)
Frame = -1 / -3
Query: 289 VADDKRRDTVVPVQPFPLEDLHFFNERRESSNGHERNEPKDERGAGSPGQDGCVFGADVQ 110
VA++K T+V + P PL++LH FN+RRES+N HE ++ K +R +P Q+ V +++Q
Sbjct: 243 VANNKCSHTIVSI*PLPLKNLHIFNKRRESTN*HEGDKSKHKRCT*TPSQN*VVASSNIQ 64
Query: 109 VDRADANGDEEVN 71
V+ ++A+ D V+
Sbjct: 63 VNGSNADSDNNVD 25
>gb|AC146331.35| Medicago truncatula clone mth2-7h18, complete sequence
Length = 138838
Score = 129 bits (276), Expect(5) = 5e-070
Identities = 48/88 (54%), Positives = 69/88 (78%)
Frame = +2 / +1
Query: 212 FVEEMKVFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIF 391
F+ +VF RER+NG+YGVAA++++N IS+ PFL++I S TI Y MV+ PGF HY+F
Sbjct: 106048 FIHMKQVFYRERMNGYYGVAAYILANFISSFPFLVVIALTSCTITYNMVKFRPGFIHYVF 106227
Query: 392 FVLNLYASVTVVESLMMAIASVIPNFLM 475
F LN+Y ++V+ES+MM +AS++PNFLM
Sbjct: 106228 FTLNVYGCLSVIESIMMVVASLVPNFLM 106311
Score = 95.5 bits (202), Expect(2) = 1e-021
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +2 / +3
Query: 92 CIGTIYLDVGTKYTSILARAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
C+GTIY DVG YTSILAR AC AF+ GF+TFMSIGGFPSF+EEMKV
Sbjct: 138525 CVGTIYFDVGYGYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKV 138665
Score = 84.5 bits (178), Expect(5) = 5e-070
Identities = 32/97 (32%), Positives = 56/97 (57%)
Frame = +2 / +1
Query: 605 LQGQCQNDMKGLAVDNQDPDQPKIPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILF 784
+QG +ND+ GL D P PK+ G++++ ++F + + SKW DL +F ++ YRILF
Sbjct: 107566 MQGSYKNDLLGLEFDPLLPGDPKLTGEYVITHMFGVELSHSKWWDLGALFIILICYRILF 107745
Query: 785 FLMIKINEDXLPWIRGHIARKRMQKKGPTPTMGKTPS 895
F+++K E LP + A++ + + P+ K S
Sbjct: 107746 FIILKFKERALPLFQALYAKRTLHQLEKRPSFKKMSS 107856
Score = 81.7 bits (172), Expect(5) = 5e-070
Identities = 32/47 (68%), Positives = 37/47 (78%)
Frame = +2 / +1
Query: 92 CIGTIYLDVGTKYTSILARAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
C+GT+Y DVG YTSILAR AC AFV GF+T +SIG PS +EEMKV
Sbjct: 105604 CVGTLYFDVGYSYTSILARGACGAFVTGFMTTISIGSLPSVIEEMKV 105744
Score = 52.8 bits (109), Expect(5) = 5e-070
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2 / +2
Query: 512 MLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQ 610
M+ SG+FRL D+PK WRYP+ YIS+ WA Q
Sbjct: 106439 MMSSGFFRLLSDLPKVVWRYPISYISYGAWATQ 106537
Score = 29.5 bits (58), Expect(5) = 5e-070
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 7 TLTXRSFINMSRDFG 51
TLT RSF+NM RD G
Sbjct: 105517 TLTRRSFVNMCRDIG 105561
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 7 TLTXRSFINMSRDFG 51
TLT RSF+NM RD G
Sbjct: 138438 TLTRRSFVNMCRDVG 138482
>gb|AC121245.17| Medicago truncatula clone mth2-33g3, complete sequence
Length = 125763
Score = 190 bits (410), Expect(3) = 4e-061
Identities = 72/143 (50%), Positives = 99/143 (69%)
Frame = +2 / -1
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLY 409
VF+RERLNGHYGV A+VI NT+SA P+L++I + G I Y+ L GFEH+I+F+ L+
Sbjct: 73254 VFERERLNGHYGVTAYVIGNTLSAIPYLLMISLIPGAIAYYPPGLQKGFEHFIYFICALF 73075
Query: 410 ASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYIS 589
+ + +VESLMM +AS++P+FLM ML G+FRLP D+P PFWRYPM YIS
Sbjct: 73074 SCLMLVESLMMIVASIVPDFLMGIITGAGIQGIMMLAGGFFRLPNDLPNPFWRYPMFYIS 72895
Query: 590 FHYWALQGQCQNDMKGLAVDNQD 658
FH +A QG +N+ +GL + +
Sbjct: 72894 FHRYAFQGSYKNEFEGLKFERDE 72826
Score = 182 bits (392), Expect(4) = 3e-060
Identities = 66/140 (47%), Positives = 97/140 (69%)
Frame = +2 / +3
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLY 409
VFQRER NGHYGV A+VI NT S+ PF++L+ + I Y++ L GFEH+++F L+
Sbjct: 60417 VFQRERQNGHYGVIAYVIGNTFSSIPFILLVTIIPAAITYYLPGLQKGFEHFLYFASVLF 60596
Query: 410 ASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYIS 589
+S+ +VE LMM +AS++PN+LM MLV G+F+LP++IPKPFWRYP+ Y++
Sbjct: 60597 SSLMLVEGLMMIVASIVPNYLMGIITGAGIQGIMMLVGGFFKLPHEIPKPFWRYPLHYVA 60776
Query: 590 FHYWALQGQCQNDMKGLAVD 649
FH + +G +N+ +GL D
Sbjct: 60777 FHSYVFEGLFKNEYEGLRFD 60836
Score = 180 bits (388), Expect(3) = 1e-060
Identities = 65/137 (47%), Positives = 97/137 (70%)
Frame = +2 / +1
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLY 409
VFQRER NGHYGV A+VI NT S+ PF++L+ + I Y++ L GFEH+++F L+
Sbjct: 51208 VFQRERQNGHYGVIAYVIGNTFSSIPFILLVTIIPAAITYYLPGLQKGFEHFLYFASVLF 51387
Query: 410 ASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYIS 589
+S+ +VESLMM +AS++PN+LM +LV G+F+LP++IPKPFWRYP+ Y++
Sbjct: 51388 SSLMLVESLMMIVASIVPNYLMGIITGAGIQGIMILVGGFFKLPHEIPKPFWRYPLHYVA 51567
Query: 590 FHYWALQGQCQNDMKGL 640
FH + +G +N+ +GL
Sbjct: 51568 FHTYGFEGLFKNEYEGL 51618
Score = 166 bits (358), Expect(2) = 9e-050
Identities = 62/137 (45%), Positives = 92/137 (67%)
Frame = +2 / +1
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLY 409
VF+RERLNGHYG+ AF+I N +S+ P++++I +SG+I ++ LH G EHY++F L+
Sbjct: 28306 VFKRERLNGHYGITAFLIGNILSSIPYMVMISLISGSIVCYLSGLHKGLEHYLYFASILF 28485
Query: 410 ASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYIS 589
A + VESLMM + S+ PNF+M +L G++R+P D+PKP W+YP YIS
Sbjct: 28486 AIMMWVESLMMVVGSIFPNFVMGVIIAGGVEGLAILTGGFYRIPSDLPKPLWKYPCYYIS 28665
Query: 590 FHYWALQGQCQNDMKGL 640
F +A QG +N+ +GL
Sbjct: 28666 FLTYAFQGSFKNEFEGL 28716
Score = 83.5 bits (176), Expect(3) = 2e-038
Identities = 30/62 (48%), Positives = 45/62 (72%)
Frame = +2 / +3
Query: 227 KVFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNL 406
+VF+RERLNGHYGV AF+I N S+ P++I+I + G I Y + ++H G EH+++F+ L
Sbjct: 20742 QVFERERLNGHYGVTAFLIGNIFSSLPYIIMISVIPGGIAYQLCKMHKGLEHFLYFISLL 20921
Query: 407 YA 412
A
Sbjct: 20922 IA 20927
Score = 66.1 bits (138), Expect(3) = 2e-038
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2 / +2
Query: 458 IPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQCQNDMKG 637
+PN+++ +L +G++RLP ++PK W+YP+ +ISF +A QG +N+ +G
Sbjct: 20975 LPNYVIGMFITGGIEGLMILTAGFYRLPNELPKLLWKYPLYHISFLKYAFQGSFKNEFEG 21154
Query: 638 LAVD 649
L VD
Sbjct: 21155 LKVD 21166
Score = 60.2 bits (125), Expect(3) = 1e-060
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +2 / +1
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLPWI 826
I G+ +L+ I+Q N+ SKW+DL+++ MI +YR+LF ++IKI E P I
Sbjct: 51658 ISGEEVLRDIWQSNMSYSKWVDLAILLGMIVLYRVLFLVIIKITEKVKPII 51810
Score = 57.4 bits (119), Expect(4) = 3e-060
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +2 / +3
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLP 820
I G+ +L+ +Q N+ SKW+DL+++ MI +YR+LF ++IK+ E P
Sbjct: 60867 ITGEEVLRDTWQSNMSYSKWVDLAILLGMIVLYRVLFLIIIKVTEKVKP 61013
Score = 54.2 bits (112), Expect(3) = 4e-061
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2 / -1
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLP 820
I G+ IL+ F +++ SKW+DL V+ MI +YR++F ++IK E P
Sbjct: 72804 ISGEEILRNKFHVDMSYSKWVDLGVLLGMIVLYRVVFLIIIKTTEKLKP 72658
Score = 52.4 bits (108), Expect(3) = 1e-060
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2 / +2
Query: 146 RAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
R + +F+ GF+TFMSIGGFPSFVE+MKV
Sbjct: 50717 RGSLLSFIAGFLTFMSIGGFPSFVEDMKV 50803
Score = 52.4 bits (108), Expect(2) = 9e-050
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +2 / +1
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLP 820
+ G +L I+ + + SKW+DL ++F MI +YR+LF ++ K+ E P
Sbjct: 28753 VSGRDVLTDIWHVQIGHSKWVDLFIMFGMIVVYRVLFLVINKVKEKSNP 28899
Score = 51.0 bits (105), Expect(4) = 3e-060
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +2 / +3
Query: 146 RAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
R + +F+ GF+TFM+IGGFPSFVE+MKV
Sbjct: 59676 RGSLLSFISGFLTFMTIGGFPSFVEDMKV 59762
Score = 50.1 bits (103), Expect(3) = 4e-061
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2 / -3
Query: 146 RAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
R + FVF F+TFM+IGGFPS+VE+MKV
Sbjct: 73651 RGSLLMFVFSFLTFMTIGGFPSYVEDMKV 73565
Score = 49.6 bits (102), Expect(3) = 2e-038
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2 / +2
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLP 820
+ G IL + + + SKW+DL+++F MI +YR+LF ++ K E P
Sbjct: 21182 VSGREILNDKWHVEIGHSKWVDLAIMFGMIVLYRVLFLVITKSKEKLKP 21328
Score = 27.6 bits (54), Expect(4) = 3e-060
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2 / +3
Query: 95 IGTIYLDVGTKYTSI 139
+GT+Y D+GT Y SI
Sbjct: 59517 LGTVYYDLGTSYDSI 59561
>gb|AC174344.6| Medicago truncatula clone mth2-167b8, WORKING DRAFT SEQUENCE, 24
unordered pieces
Length = 100955
Score = 180 bits (388), Expect(3) = 1e-060
Identities = 65/137 (47%), Positives = 97/137 (70%)
Frame = +2 / -1
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLY 409
VFQRER NGHYGV A+VI NT S+ PF++L+ + I Y++ L GFEH+++F L+
Sbjct: 64538 VFQRERQNGHYGVIAYVIGNTFSSIPFILLVTIIPAAITYYLPGLQKGFEHFLYFASVLF 64359
Query: 410 ASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYIS 589
+S+ +VESLMM +AS++PN+LM +LV G+F+LP++IPKPFWRYP+ Y++
Sbjct: 64358 SSLMLVESLMMIVASIVPNYLMGIITGAGIQGIMILVGGFFKLPHEIPKPFWRYPLHYVA 64179
Query: 590 FHYWALQGQCQNDMKGL 640
FH + +G +N+ +GL
Sbjct: 64178 FHTYGFEGLFKNEYEGL 64128
Score = 158 bits (339), Expect(2) = 9e-045
Identities = 60/137 (43%), Positives = 87/137 (63%)
Frame = +2 / +3
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLY 409
VF+RERLNGHYG+ AF+I N +S+ P++++I +SG+I ++ LH G EHY++F L+
Sbjct: 9198 VFKRERLNGHYGITAFLIGNILSSIPYMVMISLISGSIVCYLSGLHKGLEHYLYFASILF 9377
Query: 410 ASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYIS 589
A + VESLMM + S+ PNF+M +L G++R+P D+PKP W YP YIS
Sbjct: 9378 AIMMWVESLMMVVGSIFPNFVMGVIIAGGVEGLAILTGGFYRIPTDLPKPLWNYPCYYIS 9557
Query: 590 FHYWALQGQCQNDMKGL 640
+A G N +GL
Sbjct: 9558 LLTYAFHGSFTNRFEGL 9608
Score = 151 bits (325), Expect(3) = 1e-052
Identities = 58/141 (41%), Positives = 92/141 (65%)
Frame = +2 / -2
Query: 227 KVFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNL 406
+VF+RERLNGHYG AF+I N S+ P++I+I L + Y + ++H G EH+++F+ L
Sbjct: 37477 QVFERERLNGHYGDTAFLIGNIFSSLPYIIMISVLPV*VAYQLCKMHKGLEHFLYFISLL 37298
Query: 407 YASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYI 586
A V VESLM+ + S+ PN+++ +L +G++RLP ++PK W+YP+ +I
Sbjct: 37297 IAIVMWVESLMLVVGSISPNYVIGMFITGGIEGLMILTAGFYRLPNELPKLLWKYPLYHI 37118
Query: 587 SFHYWALQGQCQNDMKGLAVD 649
SF +A QG +N+ +GL VD
Sbjct: 37117 SFLKYAFQGSFKNEFEGLKVD 37055
Score = 94.5 bits (200), Expect(4) = 2e-038
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +2 / -2
Query: 437 MMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQ 616
MM +AS++PN+LM MLV G+F+LP++IPKPFWRYP+ Y++FH + +G
Sbjct: 17773 MMIVASIVPNYLMGIITGAGIQGIMMLVGGFFKLPHEIPKPFWRYPLHYVAFHSYVFEGL 17594
Query: 617 CQNDMKGLAVD 649
+N+ +GL D
Sbjct: 17593 FKNEYEGLRFD 17561
Score = 77.1 bits (162), Expect(2) = 6e-022
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +2 / +2
Query: 512 MLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQCQNDMKGLAVDNQD 658
ML G+FRLP D+P PFWRYPM YISFH +A QG +N+ +GL + +
Sbjct: 54896 MLAGGFFRLPNDLPNPFWRYPMFYISFHRYAFQGSYKNEFEGLKFERDE 55042
Score = 64.8 bits (135), Expect(4) = 2e-038
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2 / -3
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTI 343
VF+RERLNGHYGV A+VI NT+SA P+L++I + G I
Sbjct: 51069 VFERERLNGHYGVTAYVIGNTLSAIPYLLMISLIPGAI 50956
Score = 60.2 bits (125), Expect(3) = 1e-060
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +2 / -1
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLPWI 826
I G+ +L+ I+Q N+ SKW+DL+++ MI +YR+LF ++IKI E P I
Sbjct: 64088 ISGEEVLRDIWQSNMSYSKWVDLAILLGMIVLYRVLFLVIIKITEKVKPII 63936
Score = 57.4 bits (119), Expect(3) = 1e-052
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +2 / -2
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLP 820
I G+ +L+ +Q N+ SKW+DL+++ MI +YR+LF ++IK+ E P
Sbjct: 17530 ITGEEVLRDTWQSNMSYSKWVDLAILLGMIVLYRVLFLIIIKVTEKVKP 17384
Score = 57.0 bits (118), Expect(3) = 1e-052
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2 / -1
Query: 146 RAACSAFVFGFVTFMSIGGFPSFVEEMKVFQR 241
R + +F+FGF+TFMSIGGFPSFVE+MK+ +
Sbjct: 56009 RGSLLSFIFGFITFMSIGGFPSFVEDMKIITK 55914
Score = 54.2 bits (112), Expect(2) = 9e-045
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2 / +2
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLP 820
I G+ IL+ F +++ SKW+DL V+ MI +YR++F ++IK E P
Sbjct: 55064 ISGEEILRNKFHVDMSYSKWVDLGVLLGMIVLYRVVFLIIIKTTEKLKP 55210
Score = 52.4 bits (108), Expect(3) = 1e-060
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2 / -2
Query: 146 RAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
R + +F+ GF+TFMSIGGFPSFVE+MKV
Sbjct: 65029 RGSLLSFIAGFLTFMSIGGFPSFVEDMKV 64943
Score = 50.1 bits (103), Expect(4) = 2e-038
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2 / -2
Query: 146 RAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
R + FVF F+TFM+IGGFPS+VE+MKV
Sbjct: 51466 RGSLLMFVFSFLTFMTIGGFPSYVEDMKV 51380
Score = 48.7 bits (100), Expect(2) = 6e-022
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 335 GTICYFMVRLHPGFEHYIFFVLNLYASVTVVESLMMAIASVIPNFLM 475
G I YF L G EH+I+F + ++ ESL M +AS++P+FLM
Sbjct: 54718 GVIAYFPPSLQKGLEHFIYFFCVFLSFLS*GESLRMIVASIVPDFLM 54858
Score = 34.1 bits (68), Expect(4) = 2e-038
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2 / -1
Query: 341 ICYFMVRLHPGFEHYIFFVLNLYASVTVVESL 436
+ +++ L GF+H+ +FV L+ S+ +VE L
Sbjct: 17870 LIFYLPGLQKGFDHFFYFVRCLFCSIKLVEGL 17775
>emb|CR326732.1| mte1-55E9FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 684
Score = 159 bits (341), Expect(2) = 1e-046
Identities = 60/140 (42%), Positives = 93/140 (66%)
Frame = +2 / -3
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLY 409
VF+RERLNGHYGV AF+I N S+ P++I+I + G I Y + ++H G EH+++F+ L
Sbjct: 682 VFERERLNGHYGVTAFLIGNIFSSLPYIIMISVIPGGIAYQLCKMHKGLEHFLYFISLLI 503
Query: 410 ASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYIS 589
A V VESLM+ + S+ PN+++ +L +G++RLP ++PK W+YP+ +IS
Sbjct: 502 AIVMWVESLMLVVGSISPNYVIGMFITGGIEGLMILTAGFYRLPNELPKLLWKYPLYHIS 323
Query: 590 FHYWALQGQCQNDMKGLAVD 649
F +A QG +N+ +GL VD
Sbjct: 322 FLKYAFQGSFKNEFEGLKVD 263
Score = 49.6 bits (102), Expect(2) = 1e-046
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2 / -3
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLP 820
+ G IL + + + SKW+DL+++F MI +YR+LF ++ K E P
Sbjct: 247 VSGREILNDKWHVEIGHSKWVDLAIMFGMIVLYRVLFLVITKSKEKLKP 101
>emb|CR341804.1| mte1-74E10RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 525
Score = 182 bits (392), Expect = 8e-045
Identities = 66/140 (47%), Positives = 97/140 (69%)
Frame = +2 / +1
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLY 409
VFQRER NGHYGV A+VI NT S+ PF++L+ + I Y++ L GFEH+++F L+
Sbjct: 22 VFQRERQNGHYGVIAYVIGNTFSSIPFILLVTIIPAAITYYLPGLQKGFEHFLYFASVLF 201
Query: 410 ASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYIS 589
+S+ +VE LMM +AS++PN+LM MLV G+F+LP++IPKPFWRYP+ Y++
Sbjct: 202 SSLMLVEGLMMIVASIVPNYLMGIITGAGIQGIMMLVGGFFKLPHEIPKPFWRYPLHYVA 381
Query: 590 FHYWALQGQCQNDMKGLAVD 649
FH + +G +N+ +GL D
Sbjct: 382 FHSYVFEGLFKNEYEGLRFD 441
>emb|CR505658.1| mth4-39D16FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 537
Score = 151 bits (325), Expect(2) = 6e-042
Identities = 56/124 (45%), Positives = 82/124 (66%)
Frame = +2 / -2
Query: 287 NTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLYASVTVVESLMMAIASVIPN 466
NT+SA P+L++I + G I Y+ L GFEH+I+F+ L++ + +VESLMM +AS++P+
Sbjct: 533 NTLSAIPYLLMISLIPGAIAYYPPGLQKGFEHFIYFICALFSCLMLVESLMMIVASIVPD 354
Query: 467 FLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQCQNDMKGLAV 646
F+M ML G+FRLP D+P PFWRYPM YISFH +A QG +N+ +GL
Sbjct: 353 FIMGNITGAGIQGIMMLAGGFFRLPNDLPNPFWRYPMFYISFHRYAFQGSYKNEFEGLKF 174
Query: 647 DNQD 658
+ +
Sbjct: 173 ERDE 162
Score = 41.4 bits (84), Expect(2) = 6e-042
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2 / -2
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIK 799
I G+ IL+ F +++ SKW+DL V+ MI ++F ++IK
Sbjct: 140 ISGEEILRNKFHVDMSYSKWVDLGVLLGMIVKCGVVFLIIIK 15
>emb|CR323785.1| mte1-50N19RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 568
Score = 119 bits (255), Expect = 6e-026
Identities = 44/82 (53%), Positives = 64/82 (78%)
Frame = +2 / -2
Query: 230 VFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLY 409
VF+RERLNGHYGV A+VI NT+SA P+L++I + G I Y+ L GFEH+I+F+ L+
Sbjct: 270 VFERERLNGHYGVTAYVIGNTLSAIPYLLMISLIPGAIAYYPPGLQKGFEHFIYFICALF 91
Query: 410 ASVTVVESLMMAIASVIPNFLM 475
+ + +VESLMM +AS++P+F+M
Sbjct: 90 SCLMLVESLMMIVASIVPDFIM 25
>gb|CG973882.1|CG973882 MBENH45TR mth2 Medicago truncatula genomic clone 7H18, DNA sequence
Length = 895
Score = 95.5 bits (202), Expect(2) = 2e-021
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +2 / -1
Query: 92 CIGTIYLDVGTKYTSILARAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
C+GTIY DVG YTSILAR AC AF+ GF+TFMSIGGFPSF+EEMKV
Sbjct: 313 CVGTIYFDVGYGYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKV 173
Score = 29.0 bits (57), Expect(2) = 2e-021
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / -1
Query: 7 TLTXRSFINMSRDFG 51
TLT RSF+NM RD G
Sbjct: 400 TLTRRSFVNMCRDVG 356
>emb|CR503175.1| mth2-180D10FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 473
Score = 95.5 bits (202), Expect(2) = 2e-021
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +2 / -3
Query: 92 CIGTIYLDVGTKYTSILARAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
C+GTIY DVG YTSILAR AC AF+ GF+TFMSIGGFPSF+EEMKV
Sbjct: 318 CVGTIYFDVGYGYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKV 178
Score = 29.0 bits (57), Expect(2) = 2e-021
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / -3
Query: 7 TLTXRSFINMSRDFG 51
TLT RSF+NM RD G
Sbjct: 405 TLTRRSFVNMCRDVG 361
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 870,866,541
Number of Sequences: 392609
Number of extensions: 10769803
Number of successful extensions: 49127
Number of sequences better than 1.0e-020: 12
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 36061789932
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)