TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829406.2.1
(673 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE315571.2|BE315571 NF006C10DT1F1071 Drought Medicago tr... 100 3e-022
gb|BQ151424.1|BQ151424 NF077H07LF1F1064 Developing leaf Med... 101 5e-022
gb|BF636236.1|BF636236 NF109H03DT1F1030 Drought Medicago tr... 101 5e-022
gb|BG452763.1|BG452763 NF081B05LF1F1042 Developing leaf Med... 101 5e-022
gb|DW015957.1|DW015957 EST1224918 MTY Medicago truncatula c... 101 5e-022
gb|BQ155696.1|BQ155696 NF083C01IR1F1006 Irradiated Medicago... 101 5e-022
gb|BQ155830.1|BQ155830 NF084E04IR1F1035 Irradiated Medicago... 101 5e-022
gb|CX538007.1|CX538007 s13dNF54D07GS058_459254 Germinating ... 101 5e-022
gb|BG453100.1|BG453100 NF087B04LF1F1030 Developing leaf Med... 101 5e-022
gb|BF636193.1|BF636193 NF075E06DT1F1050 Drought Medicago tr... 101 5e-022
gb|BG454902.1|BG454902 NF109B10LF1F1078 Developing leaf Med... 101 5e-022
gb|BG452268.1|BG452268 NF084H11LF1F1096 Developing leaf Med... 101 5e-022
gb|BG646867.1|BG646867 EST508486 HOGA Medicago truncatula c... 101 5e-022
gb|BG588671.1|BG588671 EST490480 MHRP- Medicago truncatula ... 101 5e-022
gb|AJ847790.1|AJ847790 AJ847790 MtSTA Medicago truncatula c... 101 5e-022
gb|BF004279.1|BF004279 EST432777 KV1 Medicago truncatula cD... 101 5e-022
gb|BG454172.1|BG454172 NF107E02LF1F1008 Developing leaf Med... 101 5e-022
gb|AI737605.1|AI737605 T110084e KV2 Medicago truncatula cDN... 101 5e-022
gb|AL367975.1|AL367975 MtBA21E02F1 MtBA Medicago truncatula... 101 5e-022
gb|BF633701.1|BF633701 NF066C07DT1F1053 Drought Medicago tr... 101 5e-022
gb|AJ502828.1|AJ502828 AJ502828 MTAMP Medicago truncatula c... 101 2e-021
>gb|BE315571.2|BE315571 NF006C10DT1F1071 Drought Medicago truncatula cDNA clone NF006C10DT
5', mRNA sequence
Length = 341
Score = 100 bits (214), Expect(2) = 3e-022
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP 301
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP
Sbjct: 194 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP 340
Score = 24.9 bits (48), Expect(2) = 3e-022
Identities = 11/39 (28%), Positives = 14/39 (35%)
Frame = -2 / +2
Query: 564 GATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
G + PD A KL S CC V +G+
Sbjct: 80 GVSTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 196
>gb|BQ151424.1|BQ151424 NF077H07LF1F1064 Developing leaf Medicago truncatula cDNA clone
NF077H07LF 5', mRNA sequence
Length = 788
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 304 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 453
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +1
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 196 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 306
>gb|BF636236.1|BF636236 NF109H03DT1F1030 Drought Medicago truncatula cDNA clone NF109H03DT
5', mRNA sequence
Length = 671
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 305 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 454
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +2
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 197 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 307
>gb|BG452763.1|BG452763 NF081B05LF1F1042 Developing leaf Medicago truncatula cDNA clone
NF081B05LF 5', mRNA sequence
Length = 649
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 248 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 397
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +2
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 140 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 250
>gb|DW015957.1|DW015957 EST1224918 MTY Medicago truncatula cDNA clone MTYAB62, mRNA
sequence
Length = 650
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 268 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 417
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +1
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 160 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 270
>gb|BQ155696.1|BQ155696 NF083C01IR1F1006 Irradiated Medicago truncatula cDNA clone
NF083C01IR 5', mRNA sequence
Length = 589
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 222 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 371
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +3
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 114 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 224
>gb|BQ155830.1|BQ155830 NF084E04IR1F1035 Irradiated Medicago truncatula cDNA clone
NF084E04IR 5', mRNA sequence
Length = 574
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 214 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 363
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +1
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 106 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 216
>gb|CX538007.1|CX538007 s13dNF54D07GS058_459254 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 569
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 232 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 381
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +1
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 124 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 234
>gb|BG453100.1|BG453100 NF087B04LF1F1030 Developing leaf Medicago truncatula cDNA clone
NF087B04LF 5', mRNA sequence
Length = 560
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 234 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 383
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +3
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 126 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 236
>gb|BF636193.1|BF636193 NF075E06DT1F1050 Drought Medicago truncatula cDNA clone NF075E06DT
5', mRNA sequence
Length = 552
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 197 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 346
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +2
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 89 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 199
>gb|BG454902.1|BG454902 NF109B10LF1F1078 Developing leaf Medicago truncatula cDNA clone
NF109B10LF 5', mRNA sequence
Length = 554
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 192 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 341
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +3
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 84 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 194
>gb|BG452268.1|BG452268 NF084H11LF1F1096 Developing leaf Medicago truncatula cDNA clone
NF084H11LF 5', mRNA sequence
Length = 550
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 194 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 343
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +2
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 86 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 196
>gb|BG646867.1|BG646867 EST508486 HOGA Medicago truncatula cDNA clone pHOGA-15C21 5' end,
mRNA sequence
Length = 546
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 204 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 353
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +3
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 96 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 206
>gb|BG588671.1|BG588671 EST490480 MHRP- Medicago truncatula cDNA clone pMHRP-57M11, mRNA
sequence
Length = 534
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 197 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 346
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +2
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 89 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 199
>gb|AJ847790.1|AJ847790 AJ847790 MtSTA Medicago truncatula cDNA clone MtTA08J24S6, mRNA
sequence
Length = 502
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / -3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 311 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 162
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / -3
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 419 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 309
>gb|BF004279.1|BF004279 EST432777 KV1 Medicago truncatula cDNA clone pKV1-17K23, mRNA
sequence
Length = 487
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / -1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 340 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 191
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / -1
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 448 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 338
>gb|BG454172.1|BG454172 NF107E02LF1F1008 Developing leaf Medicago truncatula cDNA clone
NF107E02LF 5', mRNA sequence
Length = 485
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 127 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 276
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +1
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 19 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 129
>gb|AI737605.1|AI737605 T110084e KV2 Medicago truncatula cDNA clone pKV2-P16 5', mRNA
sequence
Length = 472
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / -3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 332 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 183
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / -3
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 440 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 330
>gb|AL367975.1|AL367975 MtBA21E02F1 MtBA Medicago truncatula cDNA clone MtBA21E02 T3, mRNA
sequence
Length = 457
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 266 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 415
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +2
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 158 TTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQ 268
>gb|BF633701.1|BF633701 NF066C07DT1F1053 Drought Medicago truncatula cDNA clone NF066C07DT
5', mRNA sequence
Length = 443
Score = 101 bits (215), Expect(2) = 5e-022
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 225 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 374
Score = 24.0 bits (46), Expect(2) = 5e-022
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -2 / +3
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A KL S CC V +G+
Sbjct: 117 TTPDNEAFKLIPCASAAIDENASVSQSCCAQVKKLGQ 227
>gb|AJ502828.1|AJ502828 AJ502828 MTAMP Medicago truncatula cDNA clone mtgmadc120026c07,
mRNA sequence
Length = 434
Score = 101 bits (215), Expect(2) = 2e-021
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
Q+P CLCAVMLS AK SG P++A+TIPKRCNL DRPVGYKCG YTLP*
Sbjct: 260 QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP* 409
Score = 22.1 bits (42), Expect(2) = 2e-021
Identities = 10/37 (27%), Positives = 13/37 (35%)
Frame = -2 / +2
Query: 558 TPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
T PD A +L S CC V +G+
Sbjct: 152 TTPDNEAFQLIPCASAAKDENASVSQSCCAQVKKLGQ 262
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 510,230,128
Number of Sequences: 392609
Number of extensions: 6269061
Number of successful extensions: 32070
Number of sequences better than 1.0e-020: 26
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 21301342205
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)