TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748535.2.1
(619 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ164947.1|BQ164947 EST610816 KVKC Medicago truncatula c... 214 8e-064
gb|BI271778.1|BI271778 NF019A05FL1F1036 Developing flower M... 214 8e-064
gb|BE322931.1|BE322931 NF025A06IN1F1038 Insect herbivory Me... 214 5e-062
gb|CB891199.1|CB891199 EST648168 KV3 Medicago truncatula cD... 214 5e-062
gb|BF648256.1|BF648256 NF045H03EC1F1031 Elicited cell cultu... 197 7e-057
gb|AA660590.1|AA660590 00476 MtRHE Medicago truncatula cDNA... 177 2e-043
gb|BG449351.1|BG449351 NF046F07IN1F1061 Insect herbivory Me... 169 4e-041
gb|CA917888.1|CA917888 EST642035 GPOD Medicago truncatula c... 140 9e-034
gb|AA660578.1|AA660578 00464 MtRHE Medicago truncatula cDNA... 90 1e-033
gb|AW559881.1|AW559881 EST314929 DSIR Medicago truncatula c... 109 1e-032
gb|BF638489.1|BF638489 NF058D09PL1F1076 Phosphate starved l... 140 2e-032
gb|AW980596.1|AW980596 EST391749 GVN Medicago truncatula cD... 119 2e-027
gb|AC142396.25| Medicago truncatula clone mth2-6g9, complet... 60 3e-027
gb|BE248881.2|BE248881 NF023B06DT1F1046 Drought Medicago tr... 121 1e-026
gb|CB894252.1|CB894252 EST647044 HOGA Medicago truncatula c... 87 6e-026
>gb|BQ164947.1|BQ164947 EST610816 KVKC Medicago truncatula cDNA clone pKVKC-3H9, mRNA
sequence
Length = 788
Score = 214 bits (462), Expect(3) = 8e-064
Identities = 85/120 (70%), Positives = 98/120 (81%)
Frame = +2 / +1
Query: 260 GETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHIS 439
GE+ RE+IKRH+HFLALQLGL G KVLDVGCGIGGPL EI+RFSSTS+TGLNNN+Y I+
Sbjct: 364 GESLRESIKRHEHFLALQLGLTPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQIT 543
Query: 440 RGKELISSAGLSEQCCFLKGDFMDMPISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLKP 619
RGK L G+ + C F+K DFM MP DN+FDA YAI+ATCHAPDA G Y E+YRVLKP
Sbjct: 544 RGKALNRKTGVDKTCNFVKADFMKMPFEDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKP 723
Score = 133 bits (286), Expect = 2e-030
Identities = 63/125 (50%), Positives = 77/125 (61%)
Frame = -2 / -1
Query: 618 GFSTR*TSL*TPCASGXXXXXXXXXXASKVLSDIGMSMKSPFKKQHCSLKPAEEMSSLPL 439
GF+T * SL* P ASG ASK+LS G+ MKS K P +S+ PL
Sbjct: 722 GFNTL*ISL*HP*ASGAWQVASIAYTASKLLSSNGIFMKSALTKLQVLSTPVLRLSAFPL 543
Query: 438 EMW*SLLFSPVIDVELNLAISIKGPPIPHPTSKTFIPFLSPNCSAKKCWCRLMASREVSP 259
+W SLLF+PV DVELN IS+ GPPIP PTSKTF P + P+C A+KC CRLM S SP
Sbjct: 542 VIWYSLLFNPVTDVELNREISLNGPPIPQPTSKTFCPGVRPSCKARKCSCRLMLSLRDSP 363
Query: 258 GYQIS 244
+ ++
Sbjct: 362 THLVA 348
Score = 40.9 bits (83), Expect(3) = 8e-064
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / +1
Query: 117 ALQLARSTGGSISKDQVKSAVDQYVKYH 200
A+ LA + GG I K QV SAVD+Y KYH
Sbjct: 148 AMDLASNLGGKIEKAQVLSAVDKYEKYH 231
Score = 28.6 bits (56), Expect(3) = 8e-064
Identities = 7/17 (41%), Positives = 16/17 (94%)
Frame = +1 / +1
Query: 208 HGGKQESRKSNYTDLIS 258
+GG+++ RK+NY+D+++
Sbjct: 238 YGGQEDERKANYSDMVN 288
>gb|BI271778.1|BI271778 NF019A05FL1F1036 Developing flower Medicago truncatula cDNA clone
NF019A05FL 5', mRNA sequence
Length = 691
Score = 214 bits (462), Expect(3) = 8e-064
Identities = 85/120 (70%), Positives = 98/120 (81%)
Frame = +2 / +2
Query: 260 GETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHIS 439
GE+ RE+IKRH+HFLALQLGL G KVLDVGCGIGGPL EI+RFSSTS+TGLNNN+Y I+
Sbjct: 311 GESLRESIKRHEHFLALQLGLTPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQIT 490
Query: 440 RGKELISSAGLSEQCCFLKGDFMDMPISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLKP 619
RGK L G+ + C F+K DFM MP DN+FDA YAI+ATCHAPDA G Y E+YRVLKP
Sbjct: 491 RGKALNRKTGVDKTCNFVKADFMKMPFEDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKP 670
Score = 133 bits (286), Expect = 2e-030
Identities = 63/125 (50%), Positives = 77/125 (61%)
Frame = -2 / -2
Query: 618 GFSTR*TSL*TPCASGXXXXXXXXXXASKVLSDIGMSMKSPFKKQHCSLKPAEEMSSLPL 439
GF+T * SL* P ASG ASK+LS G+ MKS K P +S+ PL
Sbjct: 669 GFNTL*ISL*HP*ASGAWQVASIAYTASKLLSSNGIFMKSALTKLQVLSTPVLRLSAFPL 490
Query: 438 EMW*SLLFSPVIDVELNLAISIKGPPIPHPTSKTFIPFLSPNCSAKKCWCRLMASREVSP 259
+W SLLF+PV DVELN IS+ GPPIP PTSKTF P + P+C A+KC CRLM S SP
Sbjct: 489 VIWYSLLFNPVTDVELNREISLNGPPIPQPTSKTFCPGVRPSCKARKCSCRLMLSLRDSP 310
Query: 258 GYQIS 244
+ ++
Sbjct: 309 THLVA 295
Score = 40.9 bits (83), Expect(3) = 8e-064
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / +2
Query: 117 ALQLARSTGGSISKDQVKSAVDQYVKYH 200
A+ LA + GG I K QV SAVD+Y KYH
Sbjct: 95 AMDLASNLGGKIEKAQVLSAVDKYEKYH 178
Score = 28.6 bits (56), Expect(3) = 8e-064
Identities = 7/17 (41%), Positives = 16/17 (94%)
Frame = +1 / +2
Query: 208 HGGKQESRKSNYTDLIS 258
+GG+++ RK+NY+D+++
Sbjct: 185 YGGQEDERKANYSDMVN 235
>gb|BE322931.1|BE322931 NF025A06IN1F1038 Insect herbivory Medicago truncatula cDNA clone
NF025A06IN 5', mRNA sequence
Length = 660
Score = 214 bits (462), Expect(3) = 5e-062
Identities = 85/120 (70%), Positives = 98/120 (81%)
Frame = +2 / +2
Query: 260 GETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHIS 439
GE+ RE+IKRH+HFLALQLGL G KVLDVGCGIGGPL EI+RFSSTS+TGLNNN+Y I+
Sbjct: 266 GESLRESIKRHEHFLALQLGLTPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQIT 445
Query: 440 RGKELISSAGLSEQCCFLKGDFMDMPISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLKP 619
RGK L G+ + C F+K DFM MP DN+FDA YAI+ATCHAPDA G Y E+YRVLKP
Sbjct: 446 RGKALNRKTGVDKTCNFVKADFMKMPFEDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKP 625
Score = 133 bits (286), Expect = 2e-030
Identities = 63/125 (50%), Positives = 77/125 (61%)
Frame = -2 / -1
Query: 618 GFSTR*TSL*TPCASGXXXXXXXXXXASKVLSDIGMSMKSPFKKQHCSLKPAEEMSSLPL 439
GF+T * SL* P ASG ASK+LS G+ MKS K P +S+ PL
Sbjct: 624 GFNTL*ISL*HP*ASGAWQVASIAYTASKLLSSNGIFMKSALTKLQVLSTPVLRLSAFPL 445
Query: 438 EMW*SLLFSPVIDVELNLAISIKGPPIPHPTSKTFIPFLSPNCSAKKCWCRLMASREVSP 259
+W SLLF+PV DVELN IS+ GPPIP PTSKTF P + P+C A+KC CRLM S SP
Sbjct: 444 VIWYSLLFNPVTDVELNREISLNGPPIPQPTSKTFCPGVRPSCKARKCSCRLMLSLRDSP 265
Query: 258 GYQIS 244
+ ++
Sbjct: 264 THLVA 250
Score = 35.0 bits (70), Expect(3) = 5e-062
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3 / +2
Query: 141 GGSISKDQVKSAVDQYVKYH 200
GG I K QV SAVD+Y KYH
Sbjct: 74 GGKIEKAQVLSAVDKYEKYH 133
Score = 28.6 bits (56), Expect(3) = 5e-062
Identities = 7/17 (41%), Positives = 16/17 (94%)
Frame = +1 / +2
Query: 208 HGGKQESRKSNYTDLIS 258
+GG+++ RK+NY+D+++
Sbjct: 140 YGGQEDERKANYSDMVN 190
>gb|CB891199.1|CB891199 EST648168 KV3 Medicago truncatula cDNA clone KV3-49B3, mRNA
sequence
Length = 624
Score = 214 bits (462), Expect(3) = 5e-062
Identities = 85/120 (70%), Positives = 98/120 (81%)
Frame = +2 / +2
Query: 260 GETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHIS 439
GE+ RE+IKRH+HFLALQLGL G KVLDVGCGIGGPL EI+RFSSTS+TGLNNN+Y I+
Sbjct: 197 GESLRESIKRHEHFLALQLGLTPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQIT 376
Query: 440 RGKELISSAGLSEQCCFLKGDFMDMPISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLKP 619
RGK L G+ + C F+K DFM MP DN+FDA YAI+ATCHAPDA G Y E+YRVLKP
Sbjct: 377 RGKALNRKTGVDKTCNFVKADFMKMPFEDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKP 556
Score = 133 bits (286), Expect = 2e-030
Identities = 63/125 (50%), Positives = 77/125 (61%)
Frame = -2 / -1
Query: 618 GFSTR*TSL*TPCASGXXXXXXXXXXASKVLSDIGMSMKSPFKKQHCSLKPAEEMSSLPL 439
GF+T * SL* P ASG ASK+LS G+ MKS K P +S+ PL
Sbjct: 555 GFNTL*ISL*HP*ASGAWQVASIAYTASKLLSSNGIFMKSALTKLQVLSTPVLRLSAFPL 376
Query: 438 EMW*SLLFSPVIDVELNLAISIKGPPIPHPTSKTFIPFLSPNCSAKKCWCRLMASREVSP 259
+W SLLF+PV DVELN IS+ GPPIP PTSKTF P + P+C A+KC CRLM S SP
Sbjct: 375 VIWYSLLFNPVTDVELNREISLNGPPIPQPTSKTFCPGVRPSCKARKCSCRLMLSLRDSP 196
Query: 258 GYQIS 244
+ ++
Sbjct: 195 THLVA 181
Score = 35.0 bits (70), Expect(3) = 5e-062
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3 / +2
Query: 141 GGSISKDQVKSAVDQYVKYH 200
GG I K QV SAVD+Y KYH
Sbjct: 5 GGKIEKAQVLSAVDKYEKYH 64
Score = 28.6 bits (56), Expect(3) = 5e-062
Identities = 7/17 (41%), Positives = 16/17 (94%)
Frame = +1 / +2
Query: 208 HGGKQESRKSNYTDLIS 258
+GG+++ RK+NY+D+++
Sbjct: 71 YGGQEDERKANYSDMVN 121
>gb|BF648256.1|BF648256 NF045H03EC1F1031 Elicited cell culture Medicago truncatula cDNA
clone NF045H03EC 5', mRNA sequence
Length = 635
Score = 197 bits (424), Expect(3) = 7e-057
Identities = 78/114 (68%), Positives = 91/114 (79%)
Frame = +2 / +2
Query: 260 GETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHIS 439
GE+ RE+IKRH+HFLALQLGL G KVLDVGCGIGGPL EI+RFSSTS+TGLNNN+Y I+
Sbjct: 293 GESLRESIKRHEHFLALQLGLTPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQIT 472
Query: 440 RGKELISSAGLSEQCCFLKGDFMDMPISDNTFDAAYAIQATCHAPDAQGVYSEV 601
RGK L G+ + C F+K DFM MP DN+FDA YAI+A CHAPDA G Y E+
Sbjct: 473 RGKALNRKTGVDKTCNFVKADFMKMPFEDNSFDAVYAIEAPCHAPDAYGCYKEI 634
Score = 126 bits (270), Expect = 3e-028
Identities = 59/118 (50%), Positives = 72/118 (61%)
Frame = -2 / -3
Query: 597 SL*TPCASGXXXXXXXXXXASKVLSDIGMSMKSPFKKQHCSLKPAEEMSSLPLEMW*SLL 418
SL* P ASG ASK+LS G+ MKS K P +S+ PL +W SLL
Sbjct: 630 SL*HP*ASGAWQGASIAYTASKLLSSNGIFMKSALTKLQVLSTPVLRLSAFPLVIWYSLL 451
Query: 417 FSPVIDVELNLAISIKGPPIPHPTSKTFIPFLSPNCSAKKCWCRLMASREVSPGYQIS 244
F+PV DVELN IS+ GPPIP PTSKTF P + P+C A+KC CRLM S SP + ++
Sbjct: 450 FNPVTDVELNREISLNGPPIPQPTSKTFCPGVRPSCKARKCSCRLMLSLRDSPTHLVA 277
Score = 35.0 bits (70), Expect(3) = 7e-057
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3 / +2
Query: 141 GGSISKDQVKSAVDQYVKYH 200
GG I K QV SAVD+Y KYH
Sbjct: 101 GGKIEKAQVLSAVDKYEKYH 160
Score = 28.6 bits (56), Expect(3) = 7e-057
Identities = 7/17 (41%), Positives = 16/17 (94%)
Frame = +1 / +2
Query: 208 HGGKQESRKSNYTDLIS 258
+GG+++ RK+NY+D+++
Sbjct: 167 YGGQEDERKANYSDMVN 217
>gb|AA660590.1|AA660590 00476 MtRHE Medicago truncatula cDNA 5' similar to
delta24-sterol-methyltransferase, mRNA sequence
Length = 555
Score = 177 bits (380), Expect = 2e-043
Identities = 70/102 (68%), Positives = 80/102 (78%)
Frame = +2 / +1
Query: 314 LGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHISRGKELISSAGLSEQCCFL 493
LGL G KVLDVGCGIGGPL EI+RFSSTS+TGLNNN+Y I+ GK L G+ + C F+
Sbjct: 1 LGLTPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQITXGKALNRKTGVDKTCNFV 180
Query: 494 KGDFMDMPISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLKP 619
K DFM MP DN+FDA YAI+ATCHAPDA G Y E+YRVLKP
Sbjct: 181 KADFMKMPFEDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKP 306
Score = 103 bits (220), Expect = 2e-021
Identities = 51/101 (50%), Positives = 60/101 (59%)
Frame = -2 / -2
Query: 618 GFSTR*TSL*TPCASGXXXXXXXXXXASKVLSDIGMSMKSPFKKQHCSLKPAEEMSSLPL 439
GF+T * SL* P ASG ASK+LS G+ MKS K P +S+ P
Sbjct: 305 GFNTL*ISL*HP*ASGAWQVASIAYTASKLLSSNGIFMKSALTKLQVLSTPVLRLSAFPX 126
Query: 438 EMW*SLLFSPVIDVELNLAISIKGPPIPHPTSKTFIPFLSP 316
+W SLLF+PV DVELN IS+ GPPIP PTSKTF P + P
Sbjct: 125 VIWYSLLFNPVTDVELNREISLNGPPIPQPTSKTFCPGVRP 3
>gb|BG449351.1|BG449351 NF046F07IN1F1061 Insect herbivory Medicago truncatula cDNA clone
NF046F07IN 5', mRNA sequence
Length = 670
Score = 169 bits (363), Expect = 4e-041
Identities = 66/94 (70%), Positives = 76/94 (80%)
Frame = +2 / +1
Query: 338 VLDVGCGIGGPLIEIARFSSTSITGLNNNDYHISRGKELISSAGLSEQCCFLKGDFMDMP 517
VLDVGCGIGGPL EI+RFSSTS+TGLNNN+Y I+RGK L G+ + C F+K DFM MP
Sbjct: 1 VLDVGCGIGGPLREISRFSSTSVTGLNNNEYQITRGKALNRKTGVDKTCNFVKADFMKMP 180
Query: 518 ISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLKP 619
DN+FDA YAI+ATCHAPDA G Y E+YRVLKP
Sbjct: 181 FEDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKP 282
>gb|CA917888.1|CA917888 EST642035 GPOD Medicago truncatula cDNA clone GPOD-37H9, mRNA
sequence
Length = 678
Score = 140 bits (300), Expect(2) = 9e-034
Identities = 53/121 (43%), Positives = 80/121 (66%)
Frame = +2 / +1
Query: 257 PGETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHI 436
PG++ R+A + H+ + +K G K+LDVGCG+GGP+ IA S ++ G+ N+Y +
Sbjct: 256 PGKSDRDATRLHEEMAVDLIEVKSGDKILDVGCGVGGPMRAIASHSRANVVGITINEYQV 435
Query: 437 SRGKELISSAGLSEQCCFLKGDFMDMPISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLK 616
+R K AGL C + G+F+ MP N+FD AY+I+ATCHAP+ + VY+E++RVLK
Sbjct: 436 NRAKLHNKKAGLDSLCDVVCGNFLKMPFPSNSFDGAYSIEATCHAPNLEEVYAEIFRVLK 615
Query: 617 P 619
P
Sbjct: 616 P 618
Score = 24.4 bits (47), Expect(2) = 9e-034
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 138 TGGSISKDQVKSAVDQYVKYHVPP 209
+GGSIS ++V+ + D+Y + P
Sbjct: 70 SGGSISAEKVQDSYDKYWSFFRRP 141
>gb|AA660578.1|AA660578 00464 MtRHE Medicago truncatula cDNA 5' similar to
delta24-sterol-methyltransferase, mRNA sequence
Length = 576
Score = 90.0 bits (190), Expect(2) = 1e-033
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2 / +1
Query: 314 LGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHISRGK 448
LGL G KVLDVGCGIGGPL EI+RFSSTS+TGLNNN+Y I+RGK
Sbjct: 1 LGLTPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQITRGK 135
Score = 74.4 bits (156), Expect(2) = 1e-033
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2 / +3
Query: 512 MPISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLKP 619
MP DN+FDA YAI+ATCHAPDA G Y E+YRVLKP
Sbjct: 201 MPFEDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKP 308
>gb|AW559881.1|AW559881 EST314929 DSIR Medicago truncatula cDNA clone pDSIR-25B19, mRNA
sequence
Length = 500
Score = 109 bits (233), Expect(3) = 1e-032
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = +2 / +1
Query: 260 GETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNND 427
GE+ +E+IKRH+HFLALQLGL G KVLDVGCG+GGPL EI+RFSSTS+TGLNNN+
Sbjct: 331 GESLKESIKRHEHFLALQLGLTPGQKVLDVGCGLGGPLREISRFSSTSVTGLNNNE 498
Score = 40.9 bits (83), Expect(3) = 1e-032
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / +1
Query: 117 ALQLARSTGGSISKDQVKSAVDQYVKYH 200
A+ LA + GG I K QV SAVD+Y KYH
Sbjct: 115 AMDLASNLGGKIEKAQVLSAVDKYEKYH 198
Score = 28.6 bits (56), Expect(3) = 1e-032
Identities = 7/17 (41%), Positives = 16/17 (94%)
Frame = +1 / +1
Query: 208 HGGKQESRKSNYTDLIS 258
+GG+++ RK+NY+D+++
Sbjct: 205 YGGQEDERKANYSDMVN 255
>gb|BF638489.1|BF638489 NF058D09PL1F1076 Phosphate starved leaf Medicago truncatula cDNA
clone NF058D09PL 5', mRNA sequence
Length = 613
Score = 140 bits (300), Expect = 2e-032
Identities = 53/121 (43%), Positives = 80/121 (66%)
Frame = +2 / +3
Query: 257 PGETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHI 436
PG++ R+A + H+ + +K G K+LDVGCG+GGP+ IA S ++ G+ N+Y +
Sbjct: 63 PGKSDRDATRLHEEMAVDLIEVKSGDKILDVGCGVGGPMRAIASHSRANVVGITINEYQV 242
Query: 437 SRGKELISSAGLSEQCCFLKGDFMDMPISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLK 616
+R K AGL C + G+F+ MP N+FD AY+I+ATCHAP+ + VY+E++RVLK
Sbjct: 243 NRAKLHNKKAGLDSLCDVVCGNFLKMPFPSNSFDGAYSIEATCHAPNLEEVYAEIFRVLK 422
Query: 617 P 619
P
Sbjct: 423 P 425
>gb|AW980596.1|AW980596 EST391749 GVN Medicago truncatula cDNA clone pGVN-55G12, mRNA
sequence
Length = 641
Score = 119 bits (254), Expect(2) = 2e-027
Identities = 45/109 (41%), Positives = 69/109 (63%)
Frame = +2 / +3
Query: 257 PGETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARFSSTSITGLNNNDYHI 436
PG++ R+A + H+ + +K G K+LDVGCG+GGP+ IA S ++ G+ N+Y +
Sbjct: 300 PGKSDRDATRLHEEMAVDLIEVKSGDKILDVGCGVGGPMRAIASHSRANVVGITINEYQV 479
Query: 437 SRGKELISSAGLSEQCCFLKGDFMDMPISDNTFDAAYAIQATCHAPDAQ 583
+R K AGL C + G+F+ MP N+FD AY+I+ATCHAP+ +
Sbjct: 480 NRAKLHNKKAGLDSLCDVVCGNFLKMPFPSNSFDGAYSIEATCHAPNLE 626
Score = 24.4 bits (47), Expect(2) = 2e-027
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 138 TGGSISKDQVKSAVDQYVKYHVPP 209
+GGSIS ++V+ + D+Y + P
Sbjct: 114 SGGSISAEKVQDSYDKYWSFFRRP 185
>gb|AC142396.25| Medicago truncatula clone mth2-6g9, complete sequence
Length = 106058
Score = 59.7 bits (124), Expect(6) = 3e-027
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 491 LKGDFMDMPISDNTFDAAYAIQATCHAPDA 580
++ DFM MP DN+FDA YAI+ATCHAPDA
Sbjct: 56676 MQADFMKMPFEDNSFDAVYAIEATCHAPDA 56765
Score = 50.1 bits (103), Expect(6) = 3e-027
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2 / +1
Query: 260 GETSREAIKRHQHFLALQLGLKKGMKV 340
GE+ RE+IKRH+HFLALQLGL G KV
Sbjct: 54718 GESLRESIKRHEHFLALQLGLTPGQKV 54798
Score = 41.4 bits (84), Expect(6) = 3e-027
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 338 VLDVGCGIGGPLIEIARF 391
VLDVGCGIGGPL EI+RF
Sbjct: 54903 VLDVGCGIGGPLREISRF 54956
Score = 40.9 bits (83), Expect(6) = 3e-027
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 392 SSTSITGLNNNDYHISRGK 448
SSTS+TGLNNN+Y I+RGK
Sbjct: 55404 SSTSVTGLNNNEYQITRGK 55460
Score = 28.1 bits (55), Expect(6) = 3e-027
Identities = 7/16 (43%), Positives = 15/16 (93%)
Frame = +1 / +1
Query: 208 HGGKQESRKSNYTDLI 255
+GG+++ RK+NY+D++
Sbjct: 53935 YGGQEDERKANYSDMV 53982
Score = 26.7 bits (52), Expect(6) = 3e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 584 GVYSEVYRVLKP 619
G Y E+YRVLKP
Sbjct: 56997 GCYKEIYRVLKP 57032
>gb|BE248881.2|BE248881 NF023B06DT1F1046 Drought Medicago truncatula cDNA clone NF023B06DT
5', mRNA sequence
Length = 425
Score = 121 bits (258), Expect = 1e-026
Identities = 45/94 (47%), Positives = 65/94 (69%)
Frame = +2 / +2
Query: 338 VLDVGCGIGGPLIEIARFSSTSITGLNNNDYHISRGKELISSAGLSEQCCFLKGDFMDMP 517
+LDVGCG+GGP+ IA S ++ G+ N+Y ++R K AGL C + G+F+ MP
Sbjct: 2 ILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRAKLHNKKAGLDSLCDVVCGNFLKMP 181
Query: 518 ISDNTFDAAYAIQATCHAPDAQGVYSEVYRVLKP 619
N+FD AY+I+ATCHAP+ + VY+E++RVLKP
Sbjct: 182 FPSNSFDGAYSIEATCHAPNLEEVYAEIFRVLKP 283
>gb|CB894252.1|CB894252 EST647044 HOGA Medicago truncatula cDNA clone HOGA-30H7, mRNA
sequence
Length = 792
Score = 86.8 bits (183), Expect(3) = 6e-026
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +2 / +1
Query: 260 GETSREAIKRHQHFLALQLGLKKGMKVLDVGCGIGGPLIEIARF 391
GE+ RE+IKRH+HFLALQLGL G KVLDVGCGIGGPL EI+RF
Sbjct: 241 GESLRESIKRHEHFLALQLGLTPGQKVLDVGCGIGGPLREISRF 372
Score = 40.9 bits (83), Expect(3) = 6e-026
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / +1
Query: 117 ALQLARSTGGSISKDQVKSAVDQYVKYH 200
A+ LA + GG I K QV SAVD+Y KYH
Sbjct: 25 AMDLASNLGGKIEKAQVLSAVDKYEKYH 108
Score = 28.6 bits (56), Expect(3) = 6e-026
Identities = 7/17 (41%), Positives = 16/17 (94%)
Frame = +1 / +1
Query: 208 HGGKQESRKSNYTDLIS 258
+GG+++ RK+NY+D+++
Sbjct: 115 YGGQEDERKANYSDMVN 165
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 621,453,863
Number of Sequences: 392609
Number of extensions: 8187794
Number of successful extensions: 51009
Number of sequences better than 1.0e-020: 20
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 19218280208
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)