TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3276201.2.1
(1827 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC146757.19| Medicago truncatula clone mth2-16n21, compl... 304 e-122
gb|AC147536.11| Medicago truncatula clone mth2-9l3, complet... 304 e-122
gb|BI312030.1|BI312030 EST5313780 GESD Medicago truncatula ... 264 4e-069
gb|CF068759.1|CF068759 EST669480 MTUS Medicago truncatula c... 250 4e-065
gb|BI310394.1|BI310394 EST5312144 GESD Medicago truncatula ... 238 2e-061
gb|CA918551.1|CA918551 EST642698 GESD Medicago truncatula c... 187 1e-047
gb|CA919329.1|CA919329 EST637047 MTUS Medicago truncatula c... 181 4e-044
emb|CR347602.1| mte1-81D19FM1 BAC end, cultivar Jemalong A1... 150 3e-043
gb|BI310247.1|BI310247 EST5311997 GESD Medicago truncatula ... 69 9e-041
gb|AW560956.1|AW560956 EST316004 DSIR Medicago truncatula c... 158 2e-037
gb|AW774387.1|AW774387 EST333538 KV3 Medicago truncatula cD... 128 2e-035
emb|CR510514.1| mth4-22E14FM1 BAC end, cultivar Jemalong A1... 135 3e-030
gb|AW171645.2|AW171645 N100539e rootphos(-) Medicago trunca... 81 2e-028
emb|CR296881.1| mte1-13P21RM1 BAC end, cultivar Jemalong A1... 122 7e-028
gb|BG647261.1|BG647261 EST508870 HOGA Medicago truncatula c... 119 2e-025
gb|BG647298.1|BG647298 EST508917 HOGA Medicago truncatula c... 112 1e-023
gb|CG928480.1|CG928480 MBEEA66TFC mth2 Medicago truncatula ... 76 2e-023
gb|CG945777.1|CG945777 MBEBI02TF mth2 Medicago truncatula g... 74 4e-022
>gb|AC146757.19| Medicago truncatula clone mth2-16n21, complete sequence
Length = 135915
Score = 304 bits (658), Expect(3) = e-122
Identities = 126/263 (47%), Positives = 170/263 (64%)
Frame = +2 / -3
Query: 374 RRRTVKGGAMGANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATF 553
R+R V A+ P+ +A++S+ + R GFPFG+AI K IL AY+ WF SRF+V TF
Sbjct: 40708 RKRKVVVRAVNEQGHPLPNASISLTMKRPGFPFGSAINKNILNNNAYQDWFASRFTVTTF 40529
Query: 554 ENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQL 733
ENEMKWY+ E+ Q ++Y DAM+ K I VRGHN+FWDD Q WV L+ QL
Sbjct: 40528 ENEMKWYTNEYAQGKDNYFDADAMLGFAEKQGIAVRGHNIFWDDPQYQPNWVSSLSPDQL 40349
Query: 734 KAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILF 913
A++KR+ S+VS Y G++I WDVVNENLHF+FFE+KLG SA+++ +V +D LF
Sbjct: 40348 NDAVEKRVNSIVSRYKGQLIGWDVVNENLHFSFFESKLGQNFSARMFNEVHNIDGQTTLF 40169
Query: 914 MNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDT 1093
MNE+NT+E D P Y+ K+ +I+ L +G+ S PN+PYMR+SLDT
Sbjct: 40168 MNEYNTIEDSRDGLSTPPTYIEKIKEIQSVNSQLPLGIGLESHFPNSPPNLPYMRASLDT 39989
Query: 1094 LAKLKLPMWLTEVDVVKSPNQVK 1162
L LP+W+TE+DV PNQVK
Sbjct: 39988 LRATGLPIWITELDVASQPNQVK 39920
Score = 131 bits (280), Expect(3) = e-122
Identities = 50/89 (56%), Positives = 61/89 (68%)
Frame = +2 / -2
Query: 1163 YLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRA 1342
Y EQVLRE +HP + GIVMW AW +GCY +CLTDN+FKNLP GD+VD+LI EW
Sbjct: 39842 YFEQVLREAHSHPGIQGIVMWTAWSPQGCYRICLTDNNFKNLPAGDVVDQLINEWGRAEK 39663
Query: 1343 SATTDHNGAVELHLPLGDFKFTVSHPSLK 1429
S TTD NG E L GD++ ++HP K
Sbjct: 39662 SGTTDQNGYFEASLFHGDYEIEINHPIKK 39576
Score = 77.1 bits (162), Expect(5) = 7e-035
Identities = 39/78 (50%), Positives = 48/78 (61%)
Frame = -1 / +1
Query: 1395 SPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRFLKLLSVRHMT*QPLACHAAHMT 1216
SP R +S P SVV D + HS ++ ST SP G+FLKLLSV+ + *QP HA H+T
Sbjct: 39610 SP*KREASKYPFWSVVPDFSALPHSLIN*STTSPAGKFLKLLSVKQIL*QPCGDHAVHIT 39789
Query: 1215 MPSTLGWAKPSLSTCSRY 1162
MP G SL TCS+Y
Sbjct: 39790 MP*IPG*ECASLRTCSKY 39843
Score = 64.3 bits (134), Expect(5) = 7e-035
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = -1 / +3
Query: 684 SSQNTLCPRTLILYLRIRFIMASGTR*SSWFWVHSVLYHFISFSKVATLKRDVNHFSYAG 505
SSQN L P T I +AS ++* S +S +YHFISFS V T+ D N YA
Sbjct: 40398 SSQNIL*PLTAIPCFSANPSIASASK*LSLPCAYSFVYHFISFSNVVTVNLDANQS*YAL 40577
Query: 504 RPRISLVIALPNGKP 460
R+ L++ALPNGKP
Sbjct: 40578 LFRMFLLMALPNGKP 40622
Score = 60.2 bits (125), Expect(5) = 7e-035
Identities = 35/88 (39%), Positives = 47/88 (53%)
Frame = -1 / +3
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRF 814
I I + Y+ G S S VL SFMN++ S T I A+ P+ +SK KCRF
Sbjct: 40089 ISLIFSIYVGGVDKPSRLSSMVLYSFMNKVVCPSML*TSLNILAEKFCPNLLSKNEKCRF 40268
Query: 813 SFTTSQWMTLPA*GDTTDLSRFCMAALS 730
S TTSQ ++ P DT + + F A+LS
Sbjct: 40269 SLTTSQPIS*PLYLDTMEFTLFSTASLS 40352
Score = 47.3 bits (97), Expect(3) = e-122
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2 / -2
Query: 242 YSSGPAEIYFESHAPVDIWVDSVSLQPFTFDEWDGHTRRSADKV 373
++S I ++ V+IWVD+VSLQPFT +W H S +KV
Sbjct: 40931 FNSSKCWIL*SNNTSVEIWVDNVSLQPFTEKQWRSHQELSIEKV 40800
Score = 30.4 bits (60), Expect(5) = 7e-035
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1 / +1
Query: 273 SK*ISAGPEE*AVMPPLSMLQQPDWATMAP 184
SK* SA P A+ PPLSM QQ A +AP
Sbjct: 40993 SK*SSATPVVSAIRPPLSMDQQLGSAKIAP 41082
Score = 29.9 bits (59), Expect(5) = 7e-035
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 339 HSSKVKGCSETLSTQMST 286
H V GC +TLSTQ+ST
Sbjct: 40834 HCFSVNGCKDTLSTQIST 40887
>gb|AC147536.11| Medicago truncatula clone mth2-9l3, complete sequence
Length = 111486
Score = 304 bits (658), Expect(3) = e-122
Identities = 126/263 (47%), Positives = 170/263 (64%)
Frame = +2 / -2
Query: 374 RRRTVKGGAMGANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATF 553
R+R V A+ P+ +A++S+ + R GFPFG+AI K IL AY+ WF SRF+V TF
Sbjct: 16277 RKRKVVVRAVNEQGHPLPNASISLTMKRPGFPFGSAINKNILNNNAYQDWFASRFTVTTF 16098
Query: 554 ENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQL 733
ENEMKWY+ E+ Q ++Y DAM+ K I VRGHN+FWDD Q WV L+ QL
Sbjct: 16097 ENEMKWYTNEYAQGKDNYFDADAMLGFAEKQGIAVRGHNIFWDDPQYQPNWVSSLSPDQL 15918
Query: 734 KAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILF 913
A++KR+ S+VS Y G++I WDVVNENLHF+FFE+KLG SA+++ +V +D LF
Sbjct: 15917 NDAVEKRVNSIVSRYKGQLIGWDVVNENLHFSFFESKLGQNFSARMFNEVHNIDGQTTLF 15738
Query: 914 MNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDT 1093
MNE+NT+E D P Y+ K+ +I+ L +G+ S PN+PYMR+SLDT
Sbjct: 15737 MNEYNTIEDSRDGLSTPPTYIEKIKEIQSVNSQLPLGIGLESHFPNSPPNLPYMRASLDT 15558
Query: 1094 LAKLKLPMWLTEVDVVKSPNQVK 1162
L LP+W+TE+DV PNQVK
Sbjct: 15557 LRATGLPIWITELDVASQPNQVK 15489
Score = 131 bits (280), Expect(3) = e-122
Identities = 50/89 (56%), Positives = 61/89 (68%)
Frame = +2 / -1
Query: 1163 YLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRA 1342
Y EQVLRE +HP + GIVMW AW +GCY +CLTDN+FKNLP GD+VD+LI EW
Sbjct: 15411 YFEQVLREAHSHPGIQGIVMWTAWSPQGCYRICLTDNNFKNLPAGDVVDQLINEWGRAEK 15232
Query: 1343 SATTDHNGAVELHLPLGDFKFTVSHPSLK 1429
S TTD NG E L GD++ ++HP K
Sbjct: 15231 SGTTDQNGYFEASLFHGDYEIEINHPIKK 15145
Score = 77.1 bits (162), Expect(5) = 3e-035
Identities = 39/78 (50%), Positives = 48/78 (61%)
Frame = -1 / +2
Query: 1395 SPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRFLKLLSVRHMT*QPLACHAAHMT 1216
SP R +S P SVV D + HS ++ ST SP G+FLKLLSV+ + *QP HA H+T
Sbjct: 15179 SP*KREASKYPFWSVVPDFSALPHSLIN*STTSPAGKFLKLLSVKQIL*QPCGDHAVHIT 15358
Query: 1215 MPSTLGWAKPSLSTCSRY 1162
MP G SL TCS+Y
Sbjct: 15359 MP*IPG*ECASLRTCSKY 15412
Score = 64.3 bits (134), Expect(5) = 3e-035
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = -1 / +1
Query: 684 SSQNTLCPRTLILYLRIRFIMASGTR*SSWFWVHSVLYHFISFSKVATLKRDVNHFSYAG 505
SSQN L P T I +AS ++* S +S +YHFISFS V T+ D N YA
Sbjct: 15967 SSQNIL*PLTAIPCFSANPSIASASK*LSLPCAYSFVYHFISFSNVVTVNLDANQS*YAL 16146
Query: 504 RPRISLVIALPNGKP 460
R+ L++ALPNGKP
Sbjct: 16147 LFRMFLLMALPNGKP 16191
Score = 60.2 bits (125), Expect(5) = 3e-035
Identities = 35/88 (39%), Positives = 47/88 (53%)
Frame = -1 / +1
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRF 814
I I + Y+ G S S VL SFMN++ S T I A+ P+ +SK KCRF
Sbjct: 15658 ISLIFSIYVGGVDKPSRLSSMVLYSFMNKVVCPSML*TSLNILAEKFCPNLLSKNEKCRF 15837
Query: 813 SFTTSQWMTLPA*GDTTDLSRFCMAALS 730
S TTSQ ++ P DT + + F A+LS
Sbjct: 15838 SLTTSQPIS*PLYLDTMEFTLFSTASLS 15921
Score = 47.3 bits (97), Expect(3) = e-122
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2 / -1
Query: 242 YSSGPAEIYFESHAPVDIWVDSVSLQPFTFDEWDGHTRRSADKV 373
++S I ++ V+IWVD+VSLQPFT +W H S +KV
Sbjct: 16500 FNSSKCWIL*SNNTSVEIWVDNVSLQPFTEKQWRSHQELSIEKV 16369
Score = 30.4 bits (60), Expect(5) = 3e-035
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1 / +2
Query: 273 SK*ISAGPEE*AVMPPLSMLQQPDWATMAP 184
SK* SA P A+ PPLSM QQ A +AP
Sbjct: 16562 SK*SSATPVVSAIRPPLSMDQQLGSAKIAP 16651
Score = 29.9 bits (59), Expect(5) = 3e-035
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / +2
Query: 339 HSSKVKGCSETLSTQMST 286
H V GC +TLSTQ+ST
Sbjct: 16403 HCFSVNGCKDTLSTQIST 16456
>gb|BI312030.1|BI312030 EST5313780 GESD Medicago truncatula cDNA clone pGESD16D10 5' end,
mRNA sequence
Length = 768
Score = 264 bits (570), Expect = 4e-069
Identities = 106/215 (49%), Positives = 144/215 (66%)
Frame = +2 / +2
Query: 785 KVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVP 964
++I WDV+NENLH +FFE+KLG +++++ +V +D N LFMN++NT+E D P
Sbjct: 2 QLIGWDVINENLHSSFFESKLGQNFTSRMFNEVHNVDGNTTLFMNDYNTIEDSRDGLSTP 181
Query: 965 AKYVAKMNQIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVK 1144
KY+ K+ +I+ + L +G+ PN+PYMR+SLD LA LP+W+TE+DV
Sbjct: 182 PKYIQKIREIQSWNKQLPLGIGLESHFPNFPPNLPYMRASLDILAATGLPIWITELDVAS 361
Query: 1145 SPNQVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAE 1324
PNQ YLEQVLRE +HP + GIVMW AW +GC+ MCLTDN+FKNLP GD+VDKLI E
Sbjct: 362 QPNQAGYLEQVLREAHSHPGIRGIVMWTAWSPQGCFRMCLTDNNFKNLPTGDVVDKLIYE 541
Query: 1325 WKTHRASATTDHNGAVELHLPLGDFKFTVSHPSLK 1429
W S TTD NG ++ L GD+K +SH + K
Sbjct: 542 WGRKILSGTTDKNGFLKASLFHGDYKMEISHSAKK 646
Score = 91.3 bits (193), Expect(2) = 3e-023
Identities = 50/113 (44%), Positives = 60/113 (53%)
Frame = -1 / -1
Query: 1395 SPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRFLKLLSVRHMT*QPLACHAAHMT 1216
SP R + P SVV D + HS +SLST SP G+FLKLLSV+H+ QP HA H+T
Sbjct: 612 SP*KREALRNPFLSVVPDNIFLPHS*ISLSTTSPVGKFLKLLSVKHILKQPCGDHAVHIT 433
Query: 1215 MPSTLGWAKPSLSTCSRYXXXXXXXXXXXXXSHMGSFSLASVSSELLMYGMLG 1057
MP G SL TCS+Y H+G A +S E LM G LG
Sbjct: 432 MPRIPG*ECASLRTCSKYPA*FGWLATSNSVIHIGKPVAARISREALM*GKLG 274
Score = 40.0 bits (81), Expect(2) = 3e-023
Identities = 26/66 (39%), Positives = 31/66 (46%)
Frame = -1 / -1
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRF 814
I I Y G S S VL SFMN++ S+ T I PS +SK +CRF
Sbjct: 210 ISLIFWIYFGGVDKPSLLSSIVL*SFMNKVVFPSTL*TSLNILDVKFCPSLLSKNEECRF 31
Query: 813 SFTTSQ 796
S TSQ
Sbjct: 30 SLITSQ 13
>gb|CF068759.1|CF068759 EST669480 MTUS Medicago truncatula cDNA clone MTUS-12B3, mRNA
sequence
Length = 710
Score = 250 bits (541), Expect = 4e-065
Identities = 102/208 (49%), Positives = 137/208 (65%)
Frame = +2 / +2
Query: 806 VNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKM 985
+NENLH FFE+KLG +++++ +V +D N LFMN++NT+E D P KY+ K+
Sbjct: 2 INENLHSLFFESKLGQNFTSRMFNEVHNVDGNTTLFMNDYNTIEDSRDGLSTPPKYIQKI 181
Query: 986 NQIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKY 1165
+I+ + L +G+ PN+PYMR+SLD LA LP+W+TE+DV PNQ Y
Sbjct: 182 REIQSWNKQLPLGIGLESHFPNFPPNLPYMRASLDILAATGLPIWITELDVASQPNQAGY 361
Query: 1166 LEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRAS 1345
LEQVLRE +HP + GIVMW AW +GC+ MCLTDN+FKNLP GD+VDKLI EW S
Sbjct: 362 LEQVLREAHSHPGIRGIVMWTAWSPQGCFRMCLTDNNFKNLPTGDVVDKLIYEWGRKILS 541
Query: 1346 ATTDHNGAVELHLPLGDFKFTVSHPSLK 1429
TTD NG ++ L GD+K +SH + K
Sbjct: 542 GTTDKNGFLKASLFHGDYKMEISHSAKK 625
Score = 91.3 bits (193), Expect(2) = 1e-021
Identities = 50/113 (44%), Positives = 60/113 (53%)
Frame = -1 / -3
Query: 1395 SPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRFLKLLSVRHMT*QPLACHAAHMT 1216
SP R + P SVV D + HS +SLST SP G+FLKLLSV+H+ QP HA H+T
Sbjct: 591 SP*KREALRNPFLSVVPDNIFLPHS*ISLSTTSPVGKFLKLLSVKHILKQPCGDHAVHIT 412
Query: 1215 MPSTLGWAKPSLSTCSRYXXXXXXXXXXXXXSHMGSFSLASVSSELLMYGMLG 1057
MP G SL TCS+Y H+G A +S E LM G LG
Sbjct: 411 MPRIPG*ECASLRTCSKYPA*FGWLATSNSVIHIGKPVAARISREALM*GKLG 253
Score = 34.5 bits (69), Expect(2) = 1e-021
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = -1 / -3
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRF 814
I I Y G S S VL SFMN++ S+ T I PS +SK +CRF
Sbjct: 189 ISLIFWIYFGGVDKPSLLSSIVL*SFMNKVVFPSTL*TSLNILDVKFCPSLLSKNKECRF 10
Query: 813 S 811
S
Sbjct: 9 S 7
>gb|BI310394.1|BI310394 EST5312144 GESD Medicago truncatula cDNA clone pGESD7P6 5' end, mRNA
sequence
Length = 747
Score = 238 bits (515), Expect = 2e-061
Identities = 97/201 (48%), Positives = 132/201 (65%)
Frame = +2 / +1
Query: 827 NFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYA 1006
+FFE+KLG +++++ +V +D N LFMN++NT+E D P KY+ K+ +I+ +
Sbjct: 1 SFFESKLGQNFTSRMFNEVHNVDGNTTLFMNDYNTIEDSRDGLSTPPKYIQKIREIQSWN 180
Query: 1007 GNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLRE 1186
L +G+ PN+PYMR+SLD LA LP+W+TE+DV PNQ YLEQVLRE
Sbjct: 181 KQLPLGIGLESHFPNFPPNLPYMRASLDILAATGLPIWITELDVASQPNQAGYLEQVLRE 360
Query: 1187 GFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASATTDHNG 1366
+HP + GIVMW AW +GC+ MCLTDN+FKNLP GD+VDKLI EW S TTD NG
Sbjct: 361 AHSHPGIRGIVMWTAWSPQGCFRMCLTDNNFKNLPTGDVVDKLIYEWGRKILSGTTDKNG 540
Query: 1367 AVELHLPLGDFKFTVSHPSLK 1429
++ L GD+K +SH + K
Sbjct: 541 FLKASLFHGDYKMEISHSAKK 603
>gb|CA918551.1|CA918551 EST642698 GESD Medicago truncatula cDNA clone GESD-27G3, mRNA
sequence
Length = 732
Score = 187 bits (402), Expect(2) = 1e-047
Identities = 73/124 (58%), Positives = 89/124 (71%)
Frame = +2 / -2
Query: 1058 PNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWH 1237
PN+PYMR+SLD LA LP+W+TE+DV PNQ YLEQVLRE +HP + GIVMW AW
Sbjct: 638 PNLPYMRASLDILAATGLPIWITELDVASQPNQAGYLEQVLREAHSHPGIRGIVMWTAWS 459
Query: 1238 ARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASATTDHNGAVELHLPLGDFKFTVSH 1417
+GC+ MCLTDN+FKNLP GD+VDKLI EW S TTD NG ++ L GD+K +SH
Sbjct: 458 PQGCFRMCLTDNNFKNLPTGDVVDKLIYEWGRKILSGTTDKNGFLKASLFHGDYKMEISH 279
Query: 1418 PSLK 1429
+ K
Sbjct: 278 SAKK 267
Score = 26.3 bits (51), Expect(2) = 1e-047
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 1010 NGGLKLGVGLESHF 1051
N L LG+GLESHF
Sbjct: 692 NKQLPLGIGLESHF 651
>gb|CA919329.1|CA919329 EST637047 MTUS Medicago truncatula cDNA clone MTUS-12B3, mRNA
sequence
Length = 720
Score = 181 bits (389), Expect = 4e-044
Identities = 71/122 (58%), Positives = 87/122 (71%)
Frame = +2 / -2
Query: 1064 IPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWHAR 1243
+PYMR+SLD LA LP+W+TE+DV PNQ YLEQVLRE +HP + GIVMW AW +
Sbjct: 626 LPYMRASLDILAATGLPIWITELDVASQPNQAGYLEQVLREAHSHPGIRGIVMWTAWSPQ 447
Query: 1244 GCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASATTDHNGAVELHLPLGDFKFTVSHPS 1423
GC+ MCLTDN+FKNLP GD+VDKLI EW S TTD NG ++ L GD+K +SH +
Sbjct: 446 GCFRMCLTDNNFKNLPTGDVVDKLIYEWGRKILSGTTDKNGFLKASLFHGDYKMEISHSA 267
Query: 1424 LK 1429
K
Sbjct: 266 KK 261
>emb|CR347602.1| mte1-81D19FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 741
Score = 150 bits (323), Expect(2) = 3e-043
Identities = 62/133 (46%), Positives = 85/133 (63%)
Frame = +2 / -3
Query: 374 RRRTVKGGAMGANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATF 553
R+R V A+ P+ +A++S+ + R GFPFG+AI K IL AY+ WF SRF+V TF
Sbjct: 403 RKRKVVVRAVNEQGHPLPNASISLTMKRPGFPFGSAINKNILNNNAYQDWFASRFTVTTF 224
Query: 554 ENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQL 733
ENEMKWY+ E+ Q ++Y DAM+ K I VRGHN+FWDD Q WV L+ QL
Sbjct: 223 ENEMKWYTNEYAQGKDNYFDADAMLGFAEKQGIAVRGHNIFWDDPQYQPNWVSSLSPDQL 44
Query: 734 KAAMQKRLKSVVS 772
A++KR +++S
Sbjct: 43 NDAVEKRGIALIS 5
Score = 47.3 bits (97), Expect(2) = 3e-043
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2 / -2
Query: 242 YSSGPAEIYFESHAPVDIWVDSVSLQPFTFDEWDGHTRRSADKV 373
++S I ++ V+IWVD+VSLQPFT +W H S +KV
Sbjct: 626 FNSSKCWIL*SNNTSVEIWVDNVSLQPFTEKQWRSHQELSIEKV 495
>gb|BI310247.1|BI310247 EST5311997 GESD Medicago truncatula cDNA clone pGESD7D23 5' end,
mRNA sequence
Length = 841
Score = 69.3 bits (145), Expect(4) = 9e-041
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +2 / +3
Query: 458 LGFPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMM 628
L F FG+A+ K IL AY WF SRF+ F NEMKWY+ E+TQ ++Y D M+
Sbjct: 663 LVFHFGSAMNKYILSNTAYHYWFASRFTGTAF*NEMKWYTNEYTQGRDNYFEADVML 833
Score = 62.9 bits (131), Expect(4) = 9e-041
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +2 / +1
Query: 275 SHAPVDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVKGGAMGANDKPMAHANVSIELL 454
++ V+IW+D++SLQPFT +W H ++ +K R++ V A+ +P+ +A +SI +
Sbjct: 478 NNTSVEIWIDNISLQPFTKKQWTSHQEQNIEKTRKKNVVVQALDEQGRPLPNARISITMK 657
Query: 455 RLGF 466
R F
Sbjct: 658 RYWF 669
Score = 52.4 bits (108), Expect(4) = 9e-041
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +2 / +1
Query: 185 GAIVAQSGCWSMLKGGMTAYSSGPAEIYFESH 280
GAI A+ CWSMLKGG+TA ++ AE+YFES+
Sbjct: 385 GAIYAEPNCWSMLKGGLTADATEVAELYFESN 480
Score = 41.4 bits (84), Expect(4) = 9e-041
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1 / +1
Query: 4 MGRSYVSSSGKLLPSHSVYQRIQMQSDRHYSLSAW 108
+G YV ++ + P SV Q+I +Q+ HYSLSAW
Sbjct: 211 LGNKYVVANNRNQPHDSVAQKIYLQNGLHYSLSAW 315
>gb|AW560956.1|AW560956 EST316004 DSIR Medicago truncatula cDNA clone pDSIR-30L5, mRNA
sequence
Length = 640
Score = 158 bits (340), Expect = 2e-037
Identities = 67/188 (35%), Positives = 107/188 (56%)
Frame = +2 / +2
Query: 365 DKVRRRTVKGGAMGANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSV 544
DK+R+R V G + + V + + FP G I++ + + + F+
Sbjct: 8 DKIRKRDVVLKFAGLDSSSYLNTMVQVRQTQNNFPIGTCISRSNIDNEDFVNFLVKHFNW 187
Query: 545 ATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNL 724
A F NE+KWY TE Q + +Y+ D ++ L +KYKI+ RGH +FW+ + QWVK LN
Sbjct: 188 AVFANELKWYWTEPQQGNLNYKDADDLLTLCQKYKIQTRGHCIFWEVDGTVQQWVKSLNK 367
Query: 725 AQLKAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNA 904
L A+Q RL S+++ Y GK H+DV NE LH +F++ +LG A +++ QLD +A
Sbjct: 368 NDLMTAVQNRLTSLLTRYKGKFSHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDLSA 547
Query: 905 ILFMNEFN 928
LF+N+++
Sbjct: 548 TLFVNDYH 571
>gb|AW774387.1|AW774387 EST333538 KV3 Medicago truncatula cDNA clone pKV3-22M2, mRNA sequence
Length = 658
Score = 128 bits (274), Expect(2) = 2e-035
Identities = 52/121 (42%), Positives = 72/121 (59%)
Frame = +2 / -2
Query: 1058 PNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWH 1237
PN+ YMRS LD L + P+WLTE + PNQ +Y E+VLRE ++HP V+GI+M+A
Sbjct: 504 PNLAYMRSGLDFLGNIGFPIWLTEASLDPQPNQAEYFEEVLREAYSHPAVEGIIMFAGPA 325
Query: 1238 ARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASATTDHNGAVELHLPLGDFKFTVSH 1417
G L D +F+ P G +VD LI EW + +A D G V++ L GD+ T +H
Sbjct: 324 QAGFNSTLLADTNFQTTPTGQVVDNLILEWGSGPYTAIADSRGIVDISLHHGDYDVTFTH 145
Query: 1418 P 1420
P
Sbjct: 144 P 142
Score = 43.7 bits (89), Expect(2) = 2e-035
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2 / -2
Query: 911 FMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGNGGLKLGVGLESHFST 1057
FMNE+NT+E GD P Y+ K+ +I + +GL+ HF++
Sbjct: 657 FMNEYNTIEYSGDKVVSPPNYLKKLEEIMQSGEATEILFAIGLQGHFAS 511
>emb|CR510514.1| mth4-22E14FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 361
Score = 135 bits (289), Expect = 3e-030
Identities = 53/91 (58%), Positives = 64/91 (70%)
Frame = +2 / +1
Query: 1157 VKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTH 1336
V+YLE L E +HP V GIVMW AW +GCY MCLTDN+FKNLP GD+VDKLI+EW
Sbjct: 28 VQYLEPSLIEAHSHPGVQGIVMWTAWTPQGCYKMCLTDNNFKNLPTGDVVDKLISEWGKA 207
Query: 1337 RASATTDHNGAVELHLPLGDFKFTVSHPSLK 1429
+ TTD NG +EL L GD+K ++HP K
Sbjct: 208 QVLGTTDQNGLLELSLFHGDYKIQINHPIKK 300
>gb|AW171645.2|AW171645 N100539e rootphos(-) Medicago truncatula cDNA clone MHRP-8B8, mRNA
sequence
Length = 547
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 33/76 (43%), Positives = 50/76 (65%)
Frame = +2 / +1
Query: 701 QWVKPLNLAQLKAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQ 880
QWVK LN L A+Q RL S+++ Y GK H+DV NE LH +F++ +LG A +++
Sbjct: 19 QWVKSLNKNDLMTAVQNRLTSLLTRYKGKFSHYDVNNEMLHGSFYQDRLGKDIRANMFKT 198
Query: 881 VGQLDRNAILFMNEFN 928
QLD +A LF+N+++
Sbjct: 199 ANQLDLSATLFVNDYH 246
Score = 46.9 bits (96), Expect(3) = 2e-028
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 1028 GVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDV 1138
G+G++ H +P P + SSLD L L LP+W TE+DV
Sbjct: 334 GIGIQGHIDSPVGPVVCSSLDKLGILGLPIWFTELDV 444
Score = 38.6 bits (78), Expect(3) = 2e-028
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 1166 LEQVLREGFAHPNVDGIVMWAAW 1234
LE +LRE AHP V+GI++W W
Sbjct: 478 LEVMLREAMAHPAVEGIMLWGFW 546
>emb|CR296881.1| mte1-13P21RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 623
Score = 122 bits (262), Expect(2) = 7e-028
Identities = 51/124 (41%), Positives = 71/124 (57%)
Frame = +2 / -2
Query: 374 RRRTVKGGAMGANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATF 553
R+R V N + + A+V +E + FP G+AI K ILG Y+ WF RF+ A F
Sbjct: 376 RKRAVTVHVSDPNGRKLQGASVFVEQISKDFPIGSAIAKTILGNIPYQNWFLKRFNAAVF 197
Query: 554 ENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQL 733
ENE+KWY+TE + +Y + D MM +R KI RGHN+FW+D WV L QL
Sbjct: 196 ENELKWYATEPHEGSVNYTISDQMMQFVRANKIIARGHNIFWEDPKYNPAWVLNLTGTQL 17
Query: 734 KAAM 745
++A+
Sbjct: 16 RSAV 5
Score = 27.2 bits (53), Expect(2) = 7e-028
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 287 VDIWVDSVSLQPFTFDEW 340
VDI + S SLQPFT +W
Sbjct: 599 VDIDIASQSLQPFTQHQW 546
>gb|BG647261.1|BG647261 EST508870 HOGA Medicago truncatula cDNA clone pHOGA-16I15 5' end,
mRNA sequence
Length = 798
Score = 119 bits (254), Expect = 2e-025
Identities = 54/168 (32%), Positives = 86/168 (51%)
Frame = +2 / +2
Query: 287 VDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVKGGAMGANDKPMAHANVSIELLRLGF 466
VD+ V + + P + + DK+R+R V G + + V + + F
Sbjct: 209 VDLMVAGLQIFPVDRHARFRYLKMQTDKIRKRDVVLKFAGLDSSSYLNTMVQVRQTQNNF 388
Query: 467 PFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRKY 646
P G I++ + + + F+ A F NE+KWY TE Q + +Y+ D ++ L +KY
Sbjct: 389 PIGTCISRSNIDNEDFVNFLVKHFNWAVFANELKWYWTEPQQGNLNYKDADDLLTLCQKY 568
Query: 647 KIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKV 790
KI+ RGH +FW+ + QWVK LN L A+Q RL S+++ Y GKV
Sbjct: 569 KIQTRGHCIFWEVDGTVQQWVKSLNKNDLMTAVQNRLTSLLTRYKGKV 712
>gb|BG647298.1|BG647298 EST508917 HOGA Medicago truncatula cDNA clone pHOGA-16B13 5' end,
mRNA sequence
Length = 802
Score = 112 bits (240), Expect = 1e-023
Identities = 51/164 (31%), Positives = 83/164 (50%)
Frame = +2 / +2
Query: 287 VDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVKGGAMGANDKPMAHANVSIELLRLGF 466
VD+ V + + P + + DK+R+R V G + + V + + F
Sbjct: 209 VDLMVAGLQIFPVDRHARFRYLKMQTDKIRKRDVVLKFAGLDSSSYLNTMVQVRQTQNNF 388
Query: 467 PFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRKY 646
P G I++ + + + F+ A F NE+KWY TE Q + +Y+ D ++ L +KY
Sbjct: 389 PIGTCISRSNIDNEDFVNFLVKHFNWAVFANELKWYWTEPQQGNLNYKDADDLLTLCQKY 568
Query: 647 KIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPY 778
KI+ RGH +FW+ + QWVK LN L A+Q RL S+++ Y
Sbjct: 569 KIQTRGHCIFWEVDGTVQQWVKSLNKNDLMTAVQNRLTSLLTRY 700
>gb|CG928480.1|CG928480 MBEEA66TFC mth2 Medicago truncatula genomic clone 36K11, DNA sequence
Length = 669
Score = 76.2 bits (160), Expect(2) = 2e-023
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +2 / -2
Query: 833 FETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGN 1012
FE KLG ASA Y LD N +FMNEFNT+E D P Y+ K+ QI+ + G
Sbjct: 668 FEDKLGENASAVYYSTAYYLDPNTSMFMNEFNTIEFSPDQVASPPNYIRKLKQIQQFPGT 489
Query: 1013 GGLKLGVGLESHFS 1054
G+ L +G++ HFS
Sbjct: 488 TGMLLTIGVQGHFS 447
Score = 59.3 bits (123), Expect(2) = 2e-023
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2 / -2
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDK 1312
Q Y E++LRE ++HP+V+GI+M+ G L D +F+N P GD+VDK
Sbjct: 161 QAMYFEEILREAYSHPDVEGIIMFVGPAQAGFTNTQLADANFQNTPTGDVVDK 3
>gb|CG945777.1|CG945777 MBEBI02TF mth2 Medicago truncatula genomic clone 19A3, DNA sequence
Length = 864
Score = 74.4 bits (156), Expect(4) = 4e-022
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +2 / -2
Query: 704 WVKPLNLAQLKAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQV 883
W++ L+ +L+ A KR+KSVVS Y+G++I WDVVNEN+H FF KLG ASA Y V
Sbjct: 746 WLRSLSPEELREAAAKRMKSVVSRYSGQLIAWDVVNENVHNRFF*DKLGENASAVYYLTV 567
Score = 39.1 bits (79), Expect(4) = 4e-022
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2 / -3
Query: 1070 YMRSSLDTLAKLKLPMWLTEVDVVKSPNQV 1159
YM+S LD L +LP+WLTE V +PN V
Sbjct: 439 YMKSGLD*LGATELPIWLTESSVDSNPNLV 350
Score = 33.6 bits (67), Expect(4) = 4e-022
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +2 / -2
Query: 1163 YLEQVLREGFAHPNVDGIVMW 1225
Y E++LRE +++P V+GI+M+
Sbjct: 104 YFEEILREAYSYPAVEGIIMF 42
Score = 23.5 bits (45), Expect(4) = 4e-022
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / -3
Query: 905 ILFMNEFNTLE 937
I+FMN FNT+E
Sbjct: 562 IMFMNVFNTIE 530
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,528,890,377
Number of Sequences: 392609
Number of extensions: 18988732
Number of successful extensions: 81032
Number of sequences better than 1.0e-020: 18
length of database: 147,244,331
effective HSP length: 57
effective length of database: 124,865,618
effective search space used: 68800955518
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)