TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204680.2.2
(534 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ497829.1|AJ497829 AJ497829 MTFLOW Medicago truncatula ... 244 6e-064
gb|AL380077.1|AL380077 MtBB50C07F1 MtBB Medicago truncatula... 242 3e-063
gb|BE999716.1|BE999716 EST431439 GVSN Medicago truncatula c... 241 6e-063
gb|BG450037.1|BG450037 NF011G12DT1F1100 Drought Medicago tr... 233 2e-060
gb|BG648144.1|BG648144 EST509763 HOGA Medicago truncatula c... 233 2e-060
gb|AJ501434.1|AJ501434 AJ501434 MTAMP Medicago truncatula c... 233 2e-060
gb|BG649060.1|BG649060 EST510679 HOGA Medicago truncatula c... 228 4e-059
gb|AL374647.1|AL374647 MtBB07G09R2 MtBB Medicago truncatula... 219 3e-056
gb|CX522333.1|CX522333 s13dNF78C09VI068_470470 Virus-Infect... 215 6e-055
gb|AL380078.1|AL380078 MtBB50C07R1 MtBB Medicago truncatula... 204 6e-052
gb|BE942155.1|BE942155 EST421734 MGHG Medicago truncatula c... 204 6e-052
gb|AC147429.9| Medicago truncatula clone mth2-24m22, WORKIN... 76 4e-047
gb|AC136839.19| Medicago truncatula clone mth2-13n2, comple... 82 6e-044
gb|AC146914.9| Medicago truncatula clone mth2-57l14, comple... 82 7e-044
gb|CA917495.1|CA917495 EST641642 GPOD Medicago truncatula c... 101 5e-031
gb|AW287870.2|AW287870 N100714e rootphos(-) Medicago trunca... 112 5e-024
gb|AL386144.1|AL386144 MtBC32G10R1 MtBC Medicago truncatula... 112 5e-024
gb|AL386704.1|AL386704 MtBC36D01R1 MtBC Medicago truncatula... 112 5e-024
gb|BE240492.1|BE240492 EST404541 MHRP- Medicago truncatula ... 111 1e-023
gb|AL383519.1|AL383519 MtBC14G12R1 MtBC Medicago truncatula... 111 1e-023
gb|AW560306.1|AW560306 EST315354 DSIR Medicago truncatula c... 106 3e-022
gb|AL377700.1|AL377700 MtBB33C07F1 MtBB Medicago truncatula... 106 3e-022
gb|BG644873.1|BG644873 EST506492 KV3 Medicago truncatula cD... 106 3e-022
gb|CA921042.1|CA921042 EST638760 MTUS Medicago truncatula c... 106 3e-022
gb|AL383518.1|AL383518 MtBC14G12F1 MtBC Medicago truncatula... 75 9e-021
>gb|AJ497829.1|AJ497829 AJ497829 MTFLOW Medicago truncatula cDNA clone mt--abc955114h10,
mRNA sequence
Length = 631
Score = 244 bits (528), Expect = 6e-064
Identities = 94/120 (78%), Positives = 107/120 (89%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IW+EEVFGPVLCVK FSTE+EAI+LANDT YGL AVIS D ERC+R+++ AGI
Sbjct: 29 TSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVISNDLERCERVTKAFKAGI 208
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+WVNCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT+YISDEPWGWY+ P+KL*
Sbjct: 209 VWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYQPPAKL* 388
>gb|AL380077.1|AL380077 MtBB50C07F1 MtBB Medicago truncatula cDNA clone MtBB50C07 T3, mRNA
sequence
Length = 450
Score = 242 bits (523), Expect = 3e-063
Identities = 92/118 (77%), Positives = 105/118 (88%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IW+EEVFGPVLCVK FSTE+EAI+LANDT YGL AVIS D ERC+R+++ AGI
Sbjct: 96 TSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVISNDLERCERVTKAFKAGI 275
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSK 358
+WVNCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT+YISDEPWGWY+ P+K
Sbjct: 276 VWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYQPPAK 449
>gb|BE999716.1|BE999716 EST431439 GVSN Medicago truncatula cDNA clone pGVSN-24G18, mRNA
sequence
Length = 688
Score = 241 bits (521), Expect = 6e-063
Identities = 93/120 (77%), Positives = 106/120 (88%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IW+EEVFGPVLCVK FSTE+EAI+LANDT YGL AVIS D ERC+R+++ AGI
Sbjct: 321 TSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVISNDLERCERVTKAFKAGI 500
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+WVNCSQPCF QAPWGG KRSGFGREL E G+DNYLSVKQVT+YISDEPWGWY+ P+KL*
Sbjct: 501 VWVNCSQPCFTQAPWGGIKRSGFGRELXEWGLDNYLSVKQVTQYISDEPWGWYQPPAKL* 680
>gb|BG450037.1|BG450037 NF011G12DT1F1100 Drought Medicago truncatula cDNA clone NF011G12DT
5', mRNA sequence
Length = 665
Score = 233 bits (503), Expect = 2e-060
Identities = 90/120 (75%), Positives = 105/120 (87%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVL VK FSTE+EAI+LANDT YGL AV+S D E+C+R+S+ + AGI
Sbjct: 206 TSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLEKCERVSKALQAGI 385
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+W+NC+QP F QAPWGG KRSGFGRELGE G+DNYLSVKQVT YIS+E WGWY+SPSKL*
Sbjct: 386 VWINCAQPSFIQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTRYISNEQWGWYQSPSKL* 565
>gb|BG648144.1|BG648144 EST509763 HOGA Medicago truncatula cDNA clone pHOGA-18P4 5' end,
mRNA sequence
Length = 619
Score = 233 bits (503), Expect = 2e-060
Identities = 90/120 (75%), Positives = 105/120 (87%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVL VK FSTE+EAI+LANDT YGL AV+S D E+C+R+S+ + AGI
Sbjct: 67 TSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLEKCERVSKALQAGI 246
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+W+NC+QP F QAPWGG KRSGFGRELGE G+DNYLSVKQVT YIS+E WGWY+SPSKL*
Sbjct: 247 VWINCAQPSFIQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTRYISNEQWGWYQSPSKL* 426
>gb|AJ501434.1|AJ501434 AJ501434 MTAMP Medicago truncatula cDNA clone mtgmadc120006h06,
mRNA sequence
Length = 654
Score = 233 bits (503), Expect = 2e-060
Identities = 90/120 (75%), Positives = 105/120 (87%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVL VK FSTE+EAI+LANDT YGL AV+S D E+C+R+S+ + AGI
Sbjct: 112 TSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLEKCERVSKALQAGI 291
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+W+NC+QP F QAPWGG KRSGFGRELGE G+DNYLSVKQVT YIS+E WGWY+SPSKL*
Sbjct: 292 VWINCAQPSFIQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTRYISNEQWGWYQSPSKL* 471
>gb|BG649060.1|BG649060 EST510679 HOGA Medicago truncatula cDNA clone pHOGA-24B8 5' end,
mRNA sequence
Length = 763
Score = 228 bits (493), Expect = 4e-059
Identities = 87/117 (74%), Positives = 102/117 (87%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVL VK FSTE+EAI+LANDT YGL AV+S D E+C+R+S+ + AGI
Sbjct: 406 TSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLEKCERVSKALQAGI 585
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
+W+NC+QP F QAPWGG KRSGFGRELGE G+DNYLSVKQVT YIS+E WGWY+SPS
Sbjct: 586 VWINCAQPSFIQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTRYISNEQWGWYQSPS 756
>gb|AL374647.1|AL374647 MtBB07G09R2 MtBB Medicago truncatula cDNA clone MtBB07G09 T7, mRNA
sequence
Length = 463
Score = 219 bits (472), Expect = 3e-056
Identities = 85/114 (74%), Positives = 99/114 (86%)
Frame = +2 / +1
Query: 23 REEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCS 202
REEVFGPVL VK FSTE+EAI+LANDT YGL AV+S D E+C+R+S+ + AGI+W+NC+
Sbjct: 1 REEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLEKCERVSKALQAGIVWINCA 180
Query: 203 QPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
QP F QAPWGG KRSGFGRELGE G+DNYLSVKQVT YIS+E WGWY+SPSKL*
Sbjct: 181 QPSFIQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTRYISNEQWGWYQSPSKL* 342
>gb|CX522333.1|CX522333 s13dNF78C09VI068_470470 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 488
Score = 215 bits (463), Expect = 6e-055
Identities = 84/107 (78%), Positives = 95/107 (88%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IW+EEVFGPVLCVK FSTE+EAI+LANDT YGL AVIS D ERC+R+++ AGI
Sbjct: 166 TSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVISNDLERCERVTKAFKAGI 345
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 325
+WVNCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT+YISD
Sbjct: 346 VWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQYISD 486
>gb|AL380078.1|AL380078 MtBB50C07R1 MtBB Medicago truncatula cDNA clone MtBB50C07 T7, mRNA
sequence
Length = 498
Score = 204 bits (441), Expect = 6e-052
Identities = 79/103 (76%), Positives = 90/103 (87%)
Frame = +2 / +2
Query: 56 KEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGG 235
K FSTE+EAI+LANDT YGL AVIS D ERC+R+++ AGI+WVNCSQPCF QAPWGG
Sbjct: 2 KTFSTEEEAIDLANDTIYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGG 181
Query: 236 NKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
KRSGFGRELGE G+DNYLSVKQVT+YISDEPWGWY+ P+KL*
Sbjct: 182 IKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYQPPAKL* 310
>gb|BE942155.1|BE942155 EST421734 MGHG Medicago truncatula cDNA clone pMGHG-7N11, mRNA
sequence
Length = 497
Score = 204 bits (441), Expect = 6e-052
Identities = 78/109 (71%), Positives = 94/109 (86%)
Frame = +2 / -1
Query: 38 GPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFC 217
GPVL VK FSTE+EAI+LANDT YGL AV+S D E+C+R+S+ + AGI+W+NC+QP F
Sbjct: 497 GPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLEKCERVSKALQAGIVWINCAQPSFI 318
Query: 218 QAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
QAPWGG KRSGFGR+LGE G+DNYLSVKQVT YIS++ WGWY+SPSKL*
Sbjct: 317 QAPWGGIKRSGFGRQLGEWGLDNYLSVKQVTRYISNDQWGWYQSPSKL* 171
>gb|AC147429.9| Medicago truncatula clone mth2-24m22, WORKING DRAFT SEQUENCE, 7
unordered pieces
Length = 29702
Score = 75.8 bits (159), Expect(4) = 4e-047
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2 / +2
Query: 164 EEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 271
+ + AGI+W+NC+QP F QAPWGG KRSGFGRELGE
Sbjct: 16730 QALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGE 16837
Score = 72.1 bits (151), Expect(4) = 4e-047
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQ 106
TSM+IWREEVFGPVL VK FSTE+EAI+LANDTQ
Sbjct: 16388 TSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTQ 16489
Score = 68.0 bits (142), Expect(4) = 4e-047
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +2 / +2
Query: 251 FGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
F R L G+DNYLSVKQVT YIS+E WGWY+SPSKL*
Sbjct: 16934 FCRCLSFRGLDNYLSVKQVTRYISNEQWGWYQSPSKL* 17047
Score = 29.5 bits (58), Expect(4) = 4e-047
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 107 YGLAGAVISGDRERCQRLSE 166
YGL AV+S D ++C+R+S+
Sbjct: 16583 YGLGSAVMSND*QKCERVSK 16642
>gb|AC136839.19| Medicago truncatula clone mth2-13n2, complete sequence
Length = 122138
Score = 82.2 bits (173), Expect(4) = 6e-044
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +2 / -1
Query: 158 LSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 271
L + AGI+WVNCSQPCF QAPWGG KRSGFGRELGE
Sbjct: 47531 LMQAFKAGIVWVNCSQPCFTQAPWGGIKRSGFGRELGE 47418
Score = 73.0 bits (153), Expect(4) = 6e-044
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +2 / -2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDT 103
TSM+IW+EEVFGPVLCVK FSTE+EAI+LANDT
Sbjct: 47869 TSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDT 47771
Score = 69.8 bits (146), Expect(4) = 6e-044
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +2 / -3
Query: 275 GIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
G+DNYLSVKQVT+YISDEPWGWY+ P+KL*
Sbjct: 46887 GLDNYLSVKQVTQYISDEPWGWYQPPAKL* 46798
Score = 33.1 bits (66), Expect(4) = 6e-044
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / -3
Query: 107 YGLAGAVISGDRERCQRLSE 166
YGL AVIS D ERC+R+++
Sbjct: 47667 YGLGAAVISNDLERCERVTK 47608
>gb|AC146914.9| Medicago truncatula clone mth2-57l14, complete sequence
Length = 122769
Score = 82.2 bits (173), Expect(4) = 7e-044
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +2 / -3
Query: 158 LSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 271
L + AGI+WVNCSQPCF QAPWGG KRSGFGRELGE
Sbjct: 31489 LMQAFKAGIVWVNCSQPCFTQAPWGGIKRSGFGRELGE 31376
Score = 73.0 bits (153), Expect(4) = 7e-044
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +2 / -1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDT 103
TSM+IW+EEVFGPVLCVK FSTE+EAI+LANDT
Sbjct: 31827 TSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDT 31729
Score = 69.8 bits (146), Expect(4) = 7e-044
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +2 / -2
Query: 275 GIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
G+DNYLSVKQVT+YISDEPWGWY+ P+KL*
Sbjct: 30845 GLDNYLSVKQVTQYISDEPWGWYQPPAKL* 30756
Score = 33.1 bits (66), Expect(4) = 7e-044
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 107 YGLAGAVISGDRERCQRLSE 166
YGL AVIS D ERC+R+++
Sbjct: 31625 YGLGAAVISNDLERCERVTK 31566
>gb|CA917495.1|CA917495 EST641642 GPOD Medicago truncatula cDNA clone GPOD-36G20, mRNA
sequence
Length = 698
Score = 101 bits (216), Expect(2) = 5e-031
Identities = 40/54 (74%), Positives = 48/54 (88%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSE 166
TSM+IW+EEVFGPVLCVK FSTE+EAI+LANDT YGL AVIS D ERC+R+++
Sbjct: 470 TSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVISNDLERCERVTK 631
Score = 53.3 bits (110), Expect(2) = 5e-031
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 176 AGIIWVNCSQPCFCQAPWG 232
AGI+WVNCSQPCF QAPWG
Sbjct: 642 AGIVWVNCSQPCFTQAPWG 698
>gb|AW287870.2|AW287870 N100714e rootphos(-) Medicago truncatula cDNA clone MHRP-10E1, mRNA
sequence
Length = 506
Score = 112 bits (239), Expect = 5e-024
Identities = 46/108 (42%), Positives = 67/108 (62%)
Frame = +2 / +2
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ + +F T +EAI+ AN+T+YGLA +++ + + +S I AGIIW
Sbjct: 50 MRIAQDEIFGPVMALMKFKTIEEAIKSANNTKYGLAAGIVTKNLDIANTVSRSIRAGIIW 229
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
+NC P+GG K SGFGR+ G + YL VK V I + PW
Sbjct: 230 INCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYNSPW 373
>gb|AL386144.1|AL386144 MtBC32G10R1 MtBC Medicago truncatula cDNA clone MtBC32G10 T7, mRNA
sequence
Length = 481
Score = 112 bits (239), Expect = 5e-024
Identities = 46/108 (42%), Positives = 67/108 (62%)
Frame = +2 / +3
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ + +F T +EAI+ AN+T+YGLA +++ + + +S I AGIIW
Sbjct: 18 MRIAQDEIFGPVMALMKFKTIEEAIKSANNTKYGLAAGIVTKNLDIANTVSRSIRAGIIW 197
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
+NC P+GG K SGFGR+ G + YL VK V I + PW
Sbjct: 198 INCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYNSPW 341
>gb|AL386704.1|AL386704 MtBC36D01R1 MtBC Medicago truncatula cDNA clone MtBC36D01 T7, mRNA
sequence
Length = 522
Score = 112 bits (239), Expect = 5e-024
Identities = 46/108 (42%), Positives = 67/108 (62%)
Frame = +2 / +3
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ + +F T +EAI+ AN+T+YGLA +++ + + +S I AGIIW
Sbjct: 60 MRIAQDEIFGPVMALMKFKTIEEAIKSANNTKYGLAAGIVTKNLDIANTVSRSIRAGIIW 239
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
+NC P+GG K SGFGR+ G + YL VK V I + PW
Sbjct: 240 INCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYNSPW 383
>gb|BE240492.1|BE240492 EST404541 MHRP- Medicago truncatula cDNA clone pMHRP-45I6, mRNA
sequence
Length = 495
Score = 111 bits (236), Expect = 1e-023
Identities = 46/108 (42%), Positives = 67/108 (62%)
Frame = +2 / +1
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ +K+F T +EAI+ AN+T+YGLA +++ + + +S I AG IW
Sbjct: 88 MVIAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGTIW 267
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
+NC P+GG K SGFGR+ G + YL VK V I + PW
Sbjct: 268 INCYFAFGDDIPFGGYKMSGFGRDYGLEALHKYLQVKSVVTPIYNSPW 411
>gb|AL383519.1|AL383519 MtBC14G12R1 MtBC Medicago truncatula cDNA clone MtBC14G12 T7, mRNA
sequence
Length = 526
Score = 111 bits (236), Expect = 1e-023
Identities = 46/108 (42%), Positives = 67/108 (62%)
Frame = +2 / +1
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ +K+F T +EAI+ AN+T+YGLA +++ + + +S I AG IW
Sbjct: 7 MVIAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGTIW 186
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
+NC P+GG K SGFGR+ G + YL VK V I + PW
Sbjct: 187 INCYFAFGDDIPFGGYKMSGFGRDYGLEALHKYLQVKSVVTPIYNSPW 330
>gb|AW560306.1|AW560306 EST315354 DSIR Medicago truncatula cDNA clone pDSIR-26B4, mRNA
sequence
Length = 643
Score = 106 bits (226), Expect = 3e-022
Identities = 44/108 (40%), Positives = 66/108 (61%)
Frame = +2 / -3
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ + +F T +EAI+ AN+T+YGLA +++ + + +S I AGIIW
Sbjct: 569 MLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIW 390
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
+N P+GG K SGFGR+ G + YL VK + I + PW
Sbjct: 389 INSYLAVGSDIPFGGYKMSGFGRDQGLEALHKYLQVKSIVTPIYNSPW 246
>gb|AL377700.1|AL377700 MtBB33C07F1 MtBB Medicago truncatula cDNA clone MtBB33C07 T3, mRNA
sequence
Length = 473
Score = 106 bits (226), Expect = 3e-022
Identities = 44/108 (40%), Positives = 66/108 (61%)
Frame = +2 / +1
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ + +F T +EAI+ AN+T+YGLA +++ + + +S I AGIIW
Sbjct: 130 MLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIW 309
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
+N P+GG K SGFGR+ G + YL VK + I + PW
Sbjct: 310 INSYLAVGSDIPFGGYKMSGFGRDQGLEALHKYLQVKSIVTPIYNSPW 453
>gb|BG644873.1|BG644873 EST506492 KV3 Medicago truncatula cDNA clone pKV3-38H21 5' end,
mRNA sequence
Length = 740
Score = 106 bits (226), Expect = 3e-022
Identities = 44/108 (40%), Positives = 66/108 (61%)
Frame = +2 / -3
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ + +F T +EAI+ AN+T+YGLA +++ + + +S I AGIIW
Sbjct: 417 MLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIW 238
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
+N P+GG K SGFGR+ G + YL VK + I + PW
Sbjct: 237 INSYLAVGSDIPFGGYKMSGFGRDQGLEALHKYLQVKSIVTPIYNSPW 94
>gb|CA921042.1|CA921042 EST638760 MTUS Medicago truncatula cDNA clone MTUS-35D1, mRNA
sequence
Length = 674
Score = 106 bits (226), Expect = 3e-022
Identities = 44/108 (40%), Positives = 66/108 (61%)
Frame = +2 / -1
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ + +F T +EAI+ AN+T+YGLA +++ + + +S I AGIIW
Sbjct: 398 MLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIW 219
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
+N P+GG K SGFGR+ G + YL VK + I + PW
Sbjct: 218 INSYLAVGSDIPFGGYKMSGFGRDQGLEALHKYLQVKSIVTPIYNSPW 75
>gb|AL383518.1|AL383518 MtBC14G12F1 MtBC Medicago truncatula cDNA clone MtBC14G12 T3, mRNA
sequence
Length = 464
Score = 75.3 bits (158), Expect(2) = 9e-021
Identities = 28/63 (44%), Positives = 45/63 (71%)
Frame = +2 / +2
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I ++E+FGPV+ +K+F T +EAI+ AN+T+YGLA +++ + + +S I AG IW
Sbjct: 86 MVIAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGTIW 265
Query: 191 VNC 199
+NC
Sbjct: 266 INC 274
Score = 45.5 bits (93), Expect(2) = 9e-021
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2 / +2
Query: 224 PWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
P+GG K SGFGR+ G + YL VK V I + PW
Sbjct: 299 PFGGYKMSGFGRDYGLEALHKYLQVKSVVTPIYNSPW 409
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 521,416,117
Number of Sequences: 392609
Number of extensions: 6863294
Number of successful extensions: 53727
Number of sequences better than 1.0e-020: 30
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 15678070696
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)