TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3197099.2.1
(631 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX522959.1|CX522959 s13dNF87A06VI049_471722 Virus-Infect... 149 5e-041
gb|CB892321.1|CB892321 EST649290 KV3 Medicago truncatula cD... 149 1e-040
gb|CA920840.1|CA920840 EST638558 MTUS Medicago truncatula c... 149 1e-040
gb|CA991416.1|CA991416 EST644924 GESD Medicago truncatula c... 149 1e-040
gb|CA989739.1|CA989739 EST643247 GLSD Medicago truncatula c... 149 1e-040
gb|CX518047.1|CX518047 s13dNF31D08VI074_421807 Virus-Infect... 149 1e-040
gb|CX518123.1|CX518123 s13dNF27D02VI014_421959 Virus-Infect... 149 1e-040
gb|CX521755.1|CX521755 s13dNF1SH04VI042_469314 Virus-Infect... 149 1e-040
gb|BM779610.1|BM779610 EST590186 KV2 Medicago truncatula cD... 149 2e-040
gb|CX517073.1|CX517073 s13dNF12C02VI018_398617 Virus-Infect... 149 2e-040
gb|BI271708.1|BI271708 NF011C12FL1F1097 Developing flower M... 149 3e-040
gb|BE204926.1|BE204926 EST397546 KV0 Medicago truncatula cD... 149 3e-039
gb|CA921380.1|CA921380 EST639098 MTUS Medicago truncatula c... 141 3e-038
gb|CX520294.1|CX520294 s13dNF40A01VI001_444640 Virus-Infect... 149 1e-035
gb|BG648445.1|BG648445 EST510064 HOGA Medicago truncatula c... 149 4e-035
gb|AL385609.1|AL385609 MtBC29E08F1 MtBC Medicago truncatula... 149 5e-035
gb|AL388861.1|AL388861 MtBC51C02F1 MtBC Medicago truncatula... 149 5e-035
gb|BF003776.1|BF003776 EST432274 KV1 Medicago truncatula cD... 149 5e-035
gb|AJ502254.1|AJ502254 AJ502254 MTAMP Medicago truncatula c... 149 5e-035
gb|CB892929.1|CB892929 EST645721 HOGA Medicago truncatula c... 149 5e-035
gb|BI312109.1|BI312109 EST5313859 GESD Medicago truncatula ... 131 7e-035
gb|CA921701.1|CA921701 EST639419 MTUS Medicago truncatula c... 79 2e-033
gb|BG456918.1|BG456918 NF099B09PL1F1075 Phosphate starved l... 125 6e-028
gb|CB894497.1|CB894497 EST647289 HOGA Medicago truncatula c... 97 5e-025
gb|AC160838.12| Medicago truncatula clone mth2-158e24, WORK... 69 5e-024
gb|CB895213.1|CB895213 EST648005 HOGA Medicago truncatula c... 108 1e-022
>gb|CX522959.1|CX522959 s13dNF87A06VI049_471722 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 471
Score = 149 bits (319), Expect(2) = 5e-041
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 41 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 220
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 221 PPAYYAHLAAFRARFYMEPETSDS 292
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -1
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 291 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 112
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 111 *AGRLVP*IPAWLQR*KSNSVGW 43
Score = 40.0 bits (81), Expect(2) = 5e-041
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = -1 / +2
Query: 367 TSNGPSGVSVKPLPAVKEKVKRMMFYC* 284
TS + +V+PLPA+K+ VK++MFYC*
Sbjct: 353 TSAPGANAAVRPLPALKDNVKKVMFYC* 436
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -1
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T SF AGRG T
Sbjct: 435 QQ*NMTFLTLSFNAGRGLT 379
>gb|CB892321.1|CB892321 EST649290 KV3 Medicago truncatula cDNA clone KV3-53J20, mRNA
sequence
Length = 852
Score = 149 bits (319), Expect(2) = 1e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 210 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 389
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 390 PPAYYAHLAAFRARFYMEPETSDS 461
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -3
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 460 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 281
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 280 *AGRLVP*IPAWLQR*KSNSVGW 212
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 537 ANAAVRPLPALKDNVKKVMFYC* 605
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -3
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T SF AGRG T
Sbjct: 604 QQ*NMTFLTLSFNAGRGLT 548
>gb|CA920840.1|CA920840 EST638558 MTUS Medicago truncatula cDNA clone MTUS-32A1, mRNA
sequence
Length = 743
Score = 149 bits (319), Expect(2) = 1e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / -1
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 602 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 423
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 422 PPAYYAHLAAFRARFYMEPETSDS 351
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / +1
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 352 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 531
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 532 *AGRLVP*IPAWLQR*KSNSVGW 600
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 275 ANAAVRPLPALKDNVKKVMFYC* 207
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / +1
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T SF AGRG T
Sbjct: 208 QQ*NMTFLTLSFNAGRGLT 264
>gb|CA991416.1|CA991416 EST644924 GESD Medicago truncatula cDNA clone GESD-32N10, mRNA
sequence
Length = 657
Score = 149 bits (319), Expect(2) = 1e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +1
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 118 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 297
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 298 PPAYYAHLAAFRARFYMEPETSDS 369
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -2
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 368 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 189
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 188 *AGRLVP*IPAWLQR*KSNSVGW 120
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 445 ANAAVRPLPALKDNVKKVMFYC* 513
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T SF AGRG T
Sbjct: 512 QQ*NMTFLTLSFNAGRGLT 456
>gb|CA989739.1|CA989739 EST643247 GLSD Medicago truncatula cDNA clone pGLSD-42J7, mRNA
sequence
Length = 647
Score = 149 bits (319), Expect(2) = 1e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 174 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 353
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 354 PPAYYAHLAAFRARFYMEPETSDS 425
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -2
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 424 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 245
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 244 *AGRLVP*IPAWLQR*KSNSVGW 176
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 501 ANAAVRPLPALKDNVKKVMFYC* 569
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T SF AGRG T
Sbjct: 568 QQ*NMTFLTLSFNAGRGLT 512
>gb|CX518047.1|CX518047 s13dNF31D08VI074_421807 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 598
Score = 149 bits (319), Expect(2) = 1e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 41 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 220
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 221 PPAYYAHLAAFRARFYMEPETSDS 292
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -2
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 291 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 112
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 111 *AGRLVP*IPAWLQR*KSNSVGW 43
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / +2
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 368 ANAAVRPLPALKDNVKKVMFYC* 436
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T SF AGRG T
Sbjct: 435 QQ*NMTFLTLSFNAGRGLT 379
>gb|CX518123.1|CX518123 s13dNF27D02VI014_421959 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 579
Score = 149 bits (319), Expect(2) = 1e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 41 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 220
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 221 PPAYYAHLAAFRARFYMEPETSDS 292
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -1
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 291 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 112
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 111 *AGRLVP*IPAWLQR*KSNSVGW 43
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / +2
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 368 ANAAVRPLPALKDNVKKVMFYC* 436
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -1
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T SF AGRG T
Sbjct: 435 QQ*NMTFLTLSFNAGRGLT 379
>gb|CX521755.1|CX521755 s13dNF1SH04VI042_469314 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 545
Score = 149 bits (319), Expect(2) = 1e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 41 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 220
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 221 PPAYYAHLAAFRARFYMEPETSDS 292
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -3
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 291 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 112
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 111 *AGRLVP*IPAWLQR*KSNSVGW 43
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / +2
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 368 ANAAVRPLPALKDNVKKVMFYC* 436
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -3
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T SF AGRG T
Sbjct: 435 QQ*NMTFLTLSFNAGRGLT 379
>gb|BM779610.1|BM779610 EST590186 KV2 Medicago truncatula cDNA clone pKV2-52F5, mRNA
sequence
Length = 796
Score = 149 bits (319), Expect(2) = 2e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 347 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 526
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 527 PPAYYAHLAAFRARFYMEPETSDS 598
Score = 98.2 bits (208), Expect(2) = 7e-023
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -2
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 597 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 418
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 417 *AGRLVP*IPAWLQR*KSNSVGW 349
Score = 38.2 bits (77), Expect(2) = 2e-040
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / +2
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 674 ANAAVRPLPALKDHVKKVMFYC* 742
Score = 29.9 bits (59), Expect(2) = 7e-023
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / -2
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T+SF AGRG T
Sbjct: 741 QQ*NMTFLTWSFNAGRGLT 685
>gb|CX517073.1|CX517073 s13dNF12C02VI018_398617 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 543
Score = 149 bits (319), Expect(2) = 2e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +1
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 151 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 330
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 331 PPAYYAHLAAFRARFYMEPETSDS 402
Score = 98.2 bits (208), Expect(2) = 5e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -2
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 401 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 222
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 221 *AGRLVP*IPAWLQR*KSNSVGW 153
Score = 38.2 bits (77), Expect(2) = 2e-040
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 352 SGVSVKPLPAVKEKVKRMMFYC 287
+ +V+PLPA+K+ VK++MFYC
Sbjct: 478 ANAAVRPLPALKDNVKKVMFYC 543
Score = 27.2 bits (53), Expect(2) = 5e-022
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / -2
Query: 288 Q*NIILFTFSFTAGRGFT 341
Q*N+ T SF AGRG T
Sbjct: 542 Q*NMTFLTLSFNAGRGLT 489
>gb|BI271708.1|BI271708 NF011C12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF011C12FL 5', mRNA sequence
Length = 691
Score = 149 bits (319), Expect(2) = 3e-040
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 180 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 359
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 360 PPAYYAHLAAFRARFYMEPETSDS 431
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +3 / -1
Query: 381 LSNISGSMXXXXXXXXKCA*YAGGTTQTERVHRA*V*QRLFGNGCISSAVKLFSSQRTWE 560
LS +SGSM KCA*YAGGT +TERVH A V* RL SA+KLFSS T
Sbjct: 430 LSEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST** 251
Query: 561 *AGLLVPWIPA*LQR*KSNSVGW 629
*AG LVP IPA LQR*KSNSVGW
Sbjct: 250 *AGRLVP*IPAWLQR*KSNSVGW 182
Score = 37.3 bits (75), Expect(2) = 3e-040
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -1 / +3
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK +MFYC*
Sbjct: 507 ANAAVRPLPALKDNVKXVMFYC* 575
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -1
Query: 285 QQ*NIILFTFSFTAGRGFT 341
QQ*N+ T SF AGRG T
Sbjct: 574 QQ*NMTFLTLSFNAGRGLT 518
>gb|BE204926.1|BE204926 EST397546 KV0 Medicago truncatula cDNA clone pKV0-18L21, mRNA
sequence
Length = 603
Score = 149 bits (319), Expect(2) = 3e-039
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 213 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 392
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 393 PPAYYAHLAAFRARFYMEPETSDS 464
Score = 34.1 bits (68), Expect(2) = 3e-039
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -1 / +3
Query: 352 SGVSVKPLPAVKEKVKRMMFY 290
+ +V+PLPA+K+ VK++MFY
Sbjct: 540 ANAAVRPLPALKDNVKKVMFY 602
>gb|CA921380.1|CA921380 EST639098 MTUS Medicago truncatula cDNA clone MTUS-39F8, mRNA
sequence
Length = 736
Score = 141 bits (302), Expect(2) = 3e-038
Identities = 57/82 (69%), Positives = 60/82 (73%)
Frame = -1 / -1
Query: 625 PTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXXXX 446
PTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 736 PTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPP 557
Query: 445 XXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 556 AYYAHLAAFRARFYMEPETSDS 491
Score = 38.6 bits (78), Expect(2) = 3e-038
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 415 ANAAVRPLPALKDNVKKVMFYC* 347
>gb|CX520294.1|CX520294 s13dNF40A01VI001_444640 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 472
Score = 149 bits (319), Expect(2) = 1e-035
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 99 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 278
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 279 PPAYYAHLAAFRARFYMEPETSDS 350
Score = 22.1 bits (42), Expect(2) = 1e-035
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1 / +3
Query: 352 SGVSVKPLPAVKEKV 308
+ +V+PLPA+K+ V
Sbjct: 426 ANAAVRPLPALKDNV 470
>gb|BG648445.1|BG648445 EST510064 HOGA Medicago truncatula cDNA clone pHOGA-19F10 5' end,
mRNA sequence
Length = 832
Score = 149 bits (320), Expect = 4e-035
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / +3
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 555 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVFIV 734
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDNQTSKTSNG 356
RFYMEPE D+ + + G
Sbjct: 735 PPAYYAHLAAFKARFYMEPETSDSGSMTSGAG 830
>gb|AL385609.1|AL385609 MtBC29E08F1 MtBC Medicago truncatula cDNA clone MtBC29E08 T3, mRNA
sequence
Length = 454
Score = 149 bits (319), Expect = 5e-035
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 164 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 343
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 344 PPAYYAHLAAFRARFYMEPETSDS 415
>gb|AL388861.1|AL388861 MtBC51C02F1 MtBC Medicago truncatula cDNA clone MtBC51C02 T3, mRNA
sequence
Length = 491
Score = 149 bits (319), Expect = 5e-035
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 164 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 343
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 344 PPAYYAHLAAFRARFYMEPETSDS 415
>gb|BF003776.1|BF003776 EST432274 KV1 Medicago truncatula cDNA clone pKV1-13L5, mRNA
sequence
Length = 601
Score = 149 bits (319), Expect = 5e-035
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 293 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 472
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 473 PPAYYAHLAAFRARFYMEPETSDS 544
>gb|AJ502254.1|AJ502254 AJ502254 MTAMP Medicago truncatula cDNA clone mtgmadc120018e05,
mRNA sequence
Length = 604
Score = 149 bits (319), Expect = 5e-035
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 237 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 416
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 417 PPAYYAHLAAFRARFYMEPETSDS 488
>gb|CB892929.1|CB892929 EST645721 HOGA Medicago truncatula cDNA clone HOGA-26O13, mRNA
sequence
Length = 776
Score = 149 bits (319), Expect = 5e-035
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = -1 / +1
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXX 452
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV
Sbjct: 478 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV 657
Query: 451 XXXXXXXXXXXXXRFYMEPEMLDN 380
RFYMEPE D+
Sbjct: 658 PPAYYAHLAAFRARFYMEPETSDS 729
>gb|BI312109.1|BI312109 EST5313859 GESD Medicago truncatula cDNA clone pGESD17C13 5' end,
mRNA sequence
Length = 741
Score = 131 bits (281), Expect(2) = 7e-035
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = -1 / +1
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCT 470
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNLCYTYARCT
Sbjct: 430 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCT 591
Score = 36.8 bits (74), Expect(2) = 7e-035
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 462 FVLSLLHTTHTWQHCGLGSTWNQR 391
F+L H H W H GLGSTW+ R
Sbjct: 600 FLLCPQHIMHIWLHSGLGSTWSLR 671
>gb|CA921701.1|CA921701 EST639419 MTUS Medicago truncatula cDNA clone MTUS-43D7, mRNA
sequence
Length = 802
Score = 78.5 bits (165), Expect(3) = 2e-033
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -1 / -2
Query: 613 DFYLCSHAGIQGTSRPAHSHVLWDENNFTA 524
DFYLCSHAGIQGTSRPAH HVLWDENNFTA
Sbjct: 762 DFYLCSHAGIQGTSRPAHYHVLWDENNFTA 673
Score = 56.1 bits (116), Expect(3) = 2e-033
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = -3 / -2
Query: 518 NAAIAKQPLLHLCPVHTLGLCCPSCILRTLGSIAGSVLHGTRDVG 384
N+ KQ LLH+C V+TL +CC S +L T SI+ + LHG R G
Sbjct: 666 NSVFDKQSLLHICQVYTLRICCSSSLLCTSSSISSTFLHGARPSG 532
Score = 47.3 bits (97), Expect(3) = 2e-033
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -1 / -3
Query: 373 SKTSNGPSGVSVKPLPAVKEKVKRMMFYC* 284
SKT+ VKPLPA+KE VKR+MFYC*
Sbjct: 506 SKTTRAAGDCGVKPLPALKENVKRVMFYC* 417
>gb|BG456918.1|BG456918 NF099B09PL1F1075 Phosphate starved leaf Medicago truncatula cDNA
clone NF099B09PL 5', mRNA sequence
Length = 683
Score = 125 bits (268), Expect = 6e-028
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = -1 / +3
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCT 470
CHPTEFDFYLCSHAGIQGTSRPAH HVL DENNF+AD +Q L NNLCYTYARCT
Sbjct: 513 CHPTEFDFYLCSHAGIQGTSRPAHYHVLXDENNFSADGLQSLTNNLCYTYARCT 674
>gb|CB894497.1|CB894497 EST647289 HOGA Medicago truncatula cDNA clone HOGA-31K16, mRNA
sequence
Length = 623
Score = 96.8 bits (205), Expect(2) = 5e-025
Identities = 40/65 (61%), Positives = 43/65 (66%)
Frame = -1 / +2
Query: 574 SRPAHSHVLWDENNFTADEMQPLPNNLCYTYARCTRSVCXXXXXXXXXXXXXXXRFYMEP 395
SRPAH HVLWDENNF+AD +Q L NNLCYTYARCTRSV RFYMEP
Sbjct: 2 SRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 181
Query: 394 EMLDN 380
E D+
Sbjct: 182 ETSDS 196
Score = 38.6 bits (78), Expect(2) = 5e-025
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1 / +2
Query: 352 SGVSVKPLPAVKEKVKRMMFYC* 284
+ +V+PLPA+K+ VK++MFYC*
Sbjct: 272 ANAAVRPLPALKDNVKKVMFYC* 340
>gb|AC160838.12| Medicago truncatula clone mth2-158e24, WORKING DRAFT SEQUENCE, 4
ordered pieces
Length = 120311
Score = 69.3 bits (145), Expect(4) = 5e-024
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = -1 / -3
Query: 583 QGTSRPAHSHVLWDENNFTADEMQPLPNNLCYT 485
QGTS+PAH HV+WD+N F+ADE+Q L NNLCYT
Sbjct: 40548 QGTSKPAHYHVIWDDNKFSADEIQSLTNNLCYT 40450
Score = 49.6 bits (102), Expect(4) = 5e-024
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1 / -2
Query: 631 CHPTEFDFYLCSHAGIQ 581
CHPTEFDFYLCSHAG+Q
Sbjct: 40669 CHPTEFDFYLCSHAGVQ 40619
Score = 43.2 bits (88), Expect(4) = 5e-024
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = -1 / -2
Query: 343 SVKPLPAVKEKVKRMMFYC* 284
SV+PLPA+KEKVK++MFYC*
Sbjct: 40069 SVRPLPALKEKVKKVMFYC* 40010
Score = 29.0 bits (57), Expect(4) = 5e-024
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 461 LCCPSCILRTLGSIAGSVLHGT 396
+C SC+L + G + ++LHGT
Sbjct: 40184 VCSASCVLCSSGCLQSAILHGT 40119
>gb|CB895213.1|CB895213 EST648005 HOGA Medicago truncatula cDNA clone HOGA-33N16, mRNA
sequence
Length = 892
Score = 108 bits (230), Expect = 1e-022
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -1 / +1
Query: 631 CHPTEFDFYLCSHAGIQGTSRPAHSHVLWDENNFTADEMQPLPNNL 494
CHPTEFDFYLCSHAGIQGTSRPAH HVLWDENNF+AD +Q L NNL
Sbjct: 754 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNL 891
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 581,712,630
Number of Sequences: 392609
Number of extensions: 7206086
Number of successful extensions: 40845
Number of sequences better than 1.0e-020: 29
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19536733975
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)