TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115079.2.1
(636 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC151527.13| Medicago truncatula clone mth2-135i19, comp... 150 7e-044
gb|AC146575.3| Medicago truncatula clone mth2-145m4, comple... 88 1e-022
gb|BF643589.1|BF643589 NF010H10EC1F1092 Elicited cell cultu... 87 7e-022
gb|AC137823.45| Medicago truncatula clone mth2-14c17, compl... 85 2e-021
gb|AC157501.1| Medicago truncatula chromosome 7 clone mte1-... 85 2e-021
gb|AC181971.1| Medicago truncatula clone mth2-13b13, WORKIN... 85 2e-021
gb|AJ500929.1|AJ500929 AJ500929 MTGIM Medicago truncatula c... 85 2e-021
gb|AW980599.1|AW980599 EST391752 GVN Medicago truncatula cD... 85 2e-021
gb|AJ845935.1|AJ845935 AJ845935 MtSNF Medicago truncatula c... 85 2e-021
gb|BQ164981.1|BQ164981 EST610850 KVKC Medicago truncatula c... 84 2e-021
gb|CA921903.1|CA921903 EST639621 MTUS Medicago truncatula c... 84 2e-021
gb|AJ846258.1|AJ846258 AJ846258 MtSC4 Medicago truncatula c... 84 2e-021
gb|BE204325.1|BE204325 EST397001 KV0 Medicago truncatula cD... 84 2e-021
gb|AL382565.1|AL382565 MtBC08C07F1 MtBC Medicago truncatula... 84 2e-021
gb|AC146683.10| Medicago truncatula clone mth2-179n10, comp... 90 3e-021
gb|AC166093.8| Medicago truncatula clone mth2-17k6, WORKING... 90 3e-021
gb|CA921165.1|CA921165 EST638883 MTUS Medicago truncatula c... 90 3e-021
emb|CR481455.1| mth2-193J24FM1 BAC end, cultivar Jemalong A... 73 6e-021
emb|AJ277211.1|MTR277211 Medicago truncatula mRNA for putat... 83 8e-021
gb|AL368203.1|AL368203 MtBA22G12R1 MtBA Medicago truncatula... 84 8e-021
>gb|AC151527.13| Medicago truncatula clone mth2-135i19, complete sequence
Length = 132470
Score = 150 bits (322), Expect(2) = 7e-044
Identities = 60/90 (66%), Positives = 73/90 (81%)
Frame = -2 / +1
Query: 635 LPEKIESRIEGFCRTLMNQVGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKA 456
LP+KIE IE FC+ LM + G+K+FN++FWAVHPGGPAILN+LE LKL +KL+ SRKA
Sbjct: 66409 LPQKIEDNIEEFCKKLMAKSGVKEFNEMFWAVHPGGPAILNKLENTLKLSGDKLECSRKA 66588
Query: 455 LMNYGNVSSNTIFYVLEYLRDELKKGAISE 366
LMN+GNVSSNTIFYV+EY+RD LK E
Sbjct: 66589 LMNFGNVSSNTIFYVMEYMRDYLKNDGTEE 66678
Score = 48.3 bits (99), Expect(2) = 7e-044
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2 / +1
Query: 371 SEEWGLILAFGPGITFEGLLVRGV 300
+EEWGL LAFGPGITFEG+L+R +
Sbjct: 66670 TEEWGLGLAFGPGITFEGVLLRSL 66741
>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence
Length = 117113
Score = 87.7 bits (185), Expect(2) = 1e-022
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = -2 / -3
Query: 635 LPEKIESRIEGFCRTLMNQVGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKA 456
+PE + I +G+ D+N IFW HPGGPAIL+++E L L+PEK+K +R+
Sbjct: 68754 VPEIVSKNINKALVDAFQPLGVSDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREV 68575
Query: 455 LMNYGNVSSNTIFYVLEYLR 396
L YGN+SS + ++L+ +R
Sbjct: 68574 LSEYGNMSSACVLFILDEMR 68515
Score = 84.0 bits (177), Expect(2) = 7e-021
Identities = 30/61 (49%), Positives = 46/61 (75%)
Frame = -2 / -1
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK++ +R+ L YGN+SS + ++L+ +
Sbjct: 81506 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEM 81327
Query: 398 R 396
R
Sbjct: 81326 R 81324
Score = 82.2 bits (173), Expect(2) = 2e-021
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = -2 / -2
Query: 629 EKIESRIEGFCRTLMNQVGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALM 450
E + I+ +GI D+N IFW HPGGPAIL+++E L L+ EKL++ R+ L
Sbjct: 74485 EIVSKNIDKVLVEAFQPLGISDYNSIFWIAHPGGPAILDQIEQKLGLKAEKLRVVREVLS 74306
Query: 449 NYGNVSSNTIFYVLEYLR 396
YGN+SS ++ ++L +R
Sbjct: 74305 EYGNMSSASVLFILNEMR 74252
Score = 40.9 bits (83), Expect(2) = 2e-021
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -2 / -2
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK +EWG++L+FGPG+T E +++ +
Sbjct: 74239 QDRLKTTGEGQEWGVLLSFGPGLTIETVVLHSI 74141
Score = 39.6 bits (80), Expect(2) = 1e-022
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -3
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 68502 QDGLKTTGEGHEWGVLFGFGPGLTIETVVLRSV 68404
Score = 37.3 bits (75), Expect(2) = 7e-021
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / -1
Query: 389 LKKGAISEEWGLILAFGPGITFEGLLVRGV 300
LK EWG++ FGPG+T E +++R V
Sbjct: 81302 LKTTGEGHEWGVLFGFGPGLTIETVVLRSV 81213
>gb|BF643589.1|BF643589 NF010H10EC1F1092 Elicited cell culture Medicago truncatula cDNA
clone NF010H10EC 5', mRNA sequence
Length = 661
Score = 86.8 bits (183), Expect(2) = 7e-022
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = -2 / -1
Query: 590 LMNQVGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYV 411
L +GI D+N IFW HPGGPAIL+++E L L+PEK+K +R+ L YGN+SS + ++
Sbjct: 616 LFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFI 437
Query: 410 LEYLR 396
L+ +R
Sbjct: 436 LDEMR 422
Score = 38.2 bits (77), Expect(2) = 7e-022
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 409 QDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 311
>gb|AC137823.45| Medicago truncatula clone mth2-14c17, complete sequence
Length = 135139
Score = 84.9 bits (179), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / +1
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 73318 LGISDYNSIFWIAHPGGPAILDQVEQKLSLKPEKMNATREVLSEYGNMSSACVLFILDEM 73497
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 73498 RKKSTKDGL 73524
Score = 84.5 bits (178), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / +1
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 85933 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEM 86112
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 86113 RKKSTKDGL 86139
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / +1
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 86128 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 86226
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / +1
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 73513 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 73611
>gb|AC157501.1| Medicago truncatula chromosome 7 clone mte1-27e16, *** SEQUENCING IN
PROGRESS ***, 12 unordered pieces
Length = 124106
Score = 84.9 bits (179), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / -1
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 59444 LGISDYNSIFWIAHPGGPAILDQVEQKLSLKPEKMNATREVLSEYGNMSSACVLFILDEM 59265
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 59264 RKKSTKDGL 59238
Score = 84.5 bits (178), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / -1
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 46829 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEM 46650
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 46649 RKKSTKDGL 46623
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 46634 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 46536
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 59249 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 59151
>gb|AC181971.1| Medicago truncatula clone mth2-13b13, WORKING DRAFT SEQUENCE, 4
unordered pieces
Length = 10862
Score = 85.4 bits (180), Expect(2) = 2e-021
Identities = 31/61 (50%), Positives = 46/61 (75%)
Frame = -2 / -3
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+K +R+ L YGN+SS + ++L+ +
Sbjct: 10242 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEM 10063
Query: 398 R 396
R
Sbjct: 10062 R 10060
Score = 38.2 bits (77), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -3
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 10047 QDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 9949
>gb|AJ500929.1|AJ500929 AJ500929 MTGIM Medicago truncatula cDNA clone mtgmacc120021g08,
mRNA sequence
Length = 660
Score = 85.4 bits (180), Expect(2) = 2e-021
Identities = 31/61 (50%), Positives = 46/61 (75%)
Frame = -2 / -1
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+K +R+ L YGN+SS + ++L+ +
Sbjct: 453 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEM 274
Query: 398 R 396
R
Sbjct: 273 R 271
Score = 38.2 bits (77), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 258 QDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 160
>gb|AW980599.1|AW980599 EST391752 GVN Medicago truncatula cDNA clone pGVN-55G18, mRNA
sequence
Length = 635
Score = 84.9 bits (179), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / +2
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 209 LGISDYNSIFWIAHPGGPAILDQVEQKLSLKPEKMNATREVLSEYGNMSSACVLFILDEM 388
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 389 RKKSTKDGL 415
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / +2
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 404 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 502
>gb|AJ845935.1|AJ845935 AJ845935 MtSNF Medicago truncatula cDNA clone MtNF14A22N1, mRNA
sequence
Length = 552
Score = 84.9 bits (179), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / -3
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 367 LGISDYNSIFWIAHPGGPAILDQVEQKLSLKPEKMNATREVLSEYGNMSSACVLFILDEM 188
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 187 RKKSTKDGL 161
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -3
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 172 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 74
>gb|BQ164981.1|BQ164981 EST610850 KVKC Medicago truncatula cDNA clone pKVKC-4D3, mRNA
sequence
Length = 788
Score = 84.5 bits (178), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / -2
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 442 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEM 263
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 262 RKKSTKDGL 236
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -2
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 247 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 149
>gb|CA921903.1|CA921903 EST639621 MTUS Medicago truncatula cDNA clone MTUS-45H12, mRNA
sequence
Length = 743
Score = 84.5 bits (178), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / -2
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 442 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEM 263
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 262 RKKSTKDGL 236
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -2
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 247 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 149
>gb|AJ846258.1|AJ846258 AJ846258 MtSC4 Medicago truncatula cDNA clone MtC413K17N1, mRNA
sequence
Length = 581
Score = 84.5 bits (178), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / +2
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 152 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEM 331
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 332 RKKSTKDGL 358
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / +2
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 347 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 445
>gb|BE204325.1|BE204325 EST397001 KV0 Medicago truncatula cDNA clone pKV0-15M4, mRNA
sequence
Length = 497
Score = 84.5 bits (178), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / -1
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 320 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEM 141
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 140 RKKSTKDGL 114
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 125 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 27
>gb|AL382565.1|AL382565 MtBC08C07F1 MtBC Medicago truncatula cDNA clone MtBC08C07 T3, mRNA
sequence
Length = 438
Score = 84.5 bits (178), Expect(2) = 2e-021
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -2 / -1
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 420 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEM 241
Query: 398 RDELKKGAI 372
R + K +
Sbjct: 240 RKKSTKDGL 214
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 398 RDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
+D LK EWG++ FGPG+T E +++R V
Sbjct: 225 KDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 127
>gb|AC146683.10| Medicago truncatula clone mth2-179n10, complete sequence
Length = 131136
Score = 89.5 bits (189), Expect(2) = 3e-021
Identities = 35/89 (39%), Positives = 55/89 (61%)
Frame = -2 / -1
Query: 635 LPEKIESRIEGFCRTLMNQVGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKA 456
+P I IE +GI D+N IFW HPGGPAIL+++E L L+PEK++ +R
Sbjct: 49236 VPGLISKNIEKALAEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLSLKPEKMQATRHV 49057
Query: 455 LMNYGNVSSNTIFYVLEYLRDELKKGAIS 369
L YGN+SS + ++L+ +R + K+ ++
Sbjct: 49056 LSEYGNMSSACVLFILDEMRRKSKEDGLA 48970
Score = 33.1 bits (66), Expect(2) = 3e-021
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2 / -1
Query: 365 EWGLILAFGPGITFEGLLVRGV 300
EWG++ FGPG+T E +++ V
Sbjct: 48951 EWGVLFGFGPGLTVETVVLHSV 48886
>gb|AC166093.8| Medicago truncatula clone mth2-17k6, WORKING DRAFT SEQUENCE, 3 ordered
pieces
Length = 113639
Score = 89.5 bits (189), Expect(2) = 3e-021
Identities = 35/89 (39%), Positives = 55/89 (61%)
Frame = -2 / -1
Query: 635 LPEKIESRIEGFCRTLMNQVGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKA 456
+P I IE +GI D+N IFW HPGGPAIL+++E L L+PEK++ +R
Sbjct: 96632 VPGLISKNIEKALAEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLSLKPEKMQATRHV 96453
Query: 455 LMNYGNVSSNTIFYVLEYLRDELKKGAIS 369
L YGN+SS + ++L+ +R + K+ ++
Sbjct: 96452 LSEYGNMSSACVLFILDEMRRKSKEDGLA 96366
Score = 33.1 bits (66), Expect(2) = 3e-021
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2 / -1
Query: 365 EWGLILAFGPGITFEGLLVRGV 300
EWG++ FGPG+T E +++ V
Sbjct: 96347 EWGVLFGFGPGLTVETVVLHSV 96282
>gb|CA921165.1|CA921165 EST638883 MTUS Medicago truncatula cDNA clone MTUS-36G8, mRNA
sequence
Length = 621
Score = 89.5 bits (189), Expect(2) = 3e-021
Identities = 35/89 (39%), Positives = 55/89 (61%)
Frame = -2 / -1
Query: 635 LPEKIESRIEGFCRTLMNQVGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKA 456
+P I IE +GI D+N IFW HPGGPAIL+++E L L+PEK++ +R
Sbjct: 462 VPGLISKNIEKALAEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLSLKPEKMQATRHV 283
Query: 455 LMNYGNVSSNTIFYVLEYLRDELKKGAIS 369
L YGN+SS + ++L+ +R + K+ ++
Sbjct: 282 LSEYGNMSSACVLFILDEMRRKSKEDGLA 196
Score = 33.1 bits (66), Expect(2) = 3e-021
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2 / -1
Query: 365 EWGLILAFGPGITFEGLLVRGV 300
EWG++ FGPG+T E +++ V
Sbjct: 177 EWGVLFGFGPGLTVETVVLHSV 112
>emb|CR481455.1| mth2-193J24FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 525
Score = 73.5 bits (154), Expect(2) = 6e-021
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = -2 / +3
Query: 509 LEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYLRDELKKGAISE 366
LE LKL +KL SRKALMN+GNVSSNTIFYV+EY+RD LK E
Sbjct: 3 LENTLKLSGDKLACSRKALMNFGNVSSNTIFYVMEYMRDYLKNDGTEE 146
Score = 48.3 bits (99), Expect(2) = 6e-021
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2 / +3
Query: 371 SEEWGLILAFGPGITFEGLLVRGV 300
+EEWGL LAFGPGITFEG+L+R +
Sbjct: 138 TEEWGLGLAFGPGITFEGVLLRSL 209
>emb|AJ277211.1|MTR277211 Medicago truncatula mRNA for putative chalcone synthase (chs1 gene)
Length = 1170
Score = 83.1 bits (175), Expect(2) = 8e-021
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = -2 / +1
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK+ +R+ L YGN+SS + ++L+ +
Sbjct: 868 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEM 1047
Query: 398 R 396
R
Sbjct: 1048 R 1050
Score = 38.2 bits (77), Expect(2) = 8e-021
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -2 / +1
Query: 401 LRDELKKGAISEEWGLILAFGPGITFEGLLVRGV 300
++D LK EWG++ FGPG+T E +++R V
Sbjct: 1060 IQDGLKTTGEGLEWGVLFGFGPGLTIETVVLRRV 1161
>gb|AL368203.1|AL368203 MtBA22G12R1 MtBA Medicago truncatula cDNA clone MtBA22G12 T7, mRNA
sequence
Length = 523
Score = 84.0 bits (177), Expect(2) = 8e-021
Identities = 30/61 (49%), Positives = 46/61 (75%)
Frame = -2 / +2
Query: 578 VGIKDFNDIFWAVHPGGPAILNRLEFCLKLQPEKLKISRKALMNYGNVSSNTIFYVLEYL 399
+GI D+N IFW HPGGPAIL+++E L L+PEK++ +R+ L YGN+SS + ++L+ +
Sbjct: 80 LGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEM 259
Query: 398 R 396
R
Sbjct: 260 R 262
Score = 37.3 bits (75), Expect(2) = 8e-021
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / +2
Query: 389 LKKGAISEEWGLILAFGPGITFEGLLVRGV 300
LK EWG++ FGPG+T E +++R V
Sbjct: 284 LKTTGEGHEWGVLFGFGPGLTIETVVLRSV 373
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 716,215,171
Number of Sequences: 392609
Number of extensions: 10765835
Number of successful extensions: 62344
Number of sequences better than 1.0e-020: 25
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19788820865
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)