TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071743.2.1
(586 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW776924.1|AW776924 EST335989 DSIL Medicago truncatula c... 111 8e-024
gb|BE202685.1|BE202685 EST402707 KV1 Medicago truncatula cD... 111 8e-024
gb|AL380060.1|AL380060 MtBB50B07F1 MtBB Medicago truncatula... 111 8e-024
gb|BF003952.1|BF003952 EST432450 KV1 Medicago truncatula cD... 111 8e-024
gb|BF641878.1|BF641878 NF051B03IN1F1028 Insect herbivory Me... 111 8e-024
gb|BF645185.1|BF645185 NF037G12EC1F1099 Elicited cell cultu... 111 8e-024
gb|BG647218.1|BG647218 EST508837 HOGA Medicago truncatula c... 111 8e-024
gb|BI266414.1|BI266414 NF103H04IN1F1044 Insect herbivory Me... 111 8e-024
gb|BI309299.1|BI309299 EST530709 GPOD Medicago truncatula c... 111 8e-024
gb|CB892496.1|CB892496 EST649465 KV3 Medicago truncatula cD... 111 8e-024
gb|CX529905.1|CX529905 s13dNF55E12MJ088_245850 Methyl Jasmo... 111 8e-024
gb|DW016087.1|DW016087 EST1225048 MTY Medicago truncatula c... 111 8e-024
gb|DW019329.1|DW019329 EST1228290 MTY Medicago truncatula c... 111 8e-024
gb|AW684291.1|AW684291 NF015B02NR1F1000 Nodulated root Medi... 110 2e-023
gb|CX532547.1|CX532547 s13dNF73D09MJ074_271381 Methyl Jasmo... 107 2e-022
gb|BG450990.1|BG450990 NF097F03DT1F1029 Drought Medicago tr... 102 4e-021
gb|BG453105.1|BG453105 NF090G12LF1F1097 Developing leaf Med... 102 4e-021
gb|BG453939.1|BG453939 NF096C06LF1F1039 Developing leaf Med... 102 4e-021
gb|AJ497431.1|AJ497431 AJ497431 MTFLOW Medicago truncatula ... 101 8e-021
>gb|AW776924.1|AW776924 EST335989 DSIL Medicago truncatula cDNA clone pDSIL-16F10, mRNA
sequence
Length = 615
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +1
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 238 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 411
>gb|BE202685.1|BE202685 EST402707 KV1 Medicago truncatula cDNA clone pKV1-2H8, mRNA
sequence
Length = 519
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +3
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 192 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 365
>gb|AL380060.1|AL380060 MtBB50B07F1 MtBB Medicago truncatula cDNA clone MtBB50B07 T3, mRNA
sequence
Length = 478
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +1
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 235 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 408
>gb|BF003952.1|BF003952 EST432450 KV1 Medicago truncatula cDNA clone pKV1-14M1, mRNA
sequence
Length = 541
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +2
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 161 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 334
>gb|BF641878.1|BF641878 NF051B03IN1F1028 Insect herbivory Medicago truncatula cDNA clone
NF051B03IN 5', mRNA sequence
Length = 690
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +1
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 223 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 396
>gb|BF645185.1|BF645185 NF037G12EC1F1099 Elicited cell culture Medicago truncatula cDNA
clone NF037G12EC 5', mRNA sequence
Length = 651
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +3
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 273 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 446
>gb|BG647218.1|BG647218 EST508837 HOGA Medicago truncatula cDNA clone pHOGA-16C19 5' end,
mRNA sequence
Length = 817
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +1
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 190 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 363
>gb|BI266414.1|BI266414 NF103H04IN1F1044 Insect herbivory Medicago truncatula cDNA clone
NF103H04IN 5', mRNA sequence
Length = 664
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +1
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 259 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 432
>gb|BI309299.1|BI309299 EST530709 GPOD Medicago truncatula cDNA clone pGPOD-11E2 5' end,
mRNA sequence
Length = 608
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +3
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 231 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 404
>gb|CB892496.1|CB892496 EST649465 KV3 Medicago truncatula cDNA clone KV3-54P17, mRNA
sequence
Length = 557
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +3
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 195 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 368
>gb|CX529905.1|CX529905 s13dNF55E12MJ088_245850 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 578
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +3
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 234 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 407
>gb|DW016087.1|DW016087 EST1225048 MTY Medicago truncatula cDNA clone MTYAD02, mRNA
sequence
Length = 563
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +1
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 172 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 345
>gb|DW019329.1|DW019329 EST1228290 MTY Medicago truncatula cDNA clone MTYBH65, mRNA
sequence
Length = 872
Score = 111 bits (240), Expect = 8e-024
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +1 / +2
Query: 412 NKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
+K RLRWT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 233 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 406
>gb|AW684291.1|AW684291 NF015B02NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF015B02NR 5', mRNA sequence
Length = 546
Score = 110 bits (238), Expect = 2e-023
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = +1 / +3
Query: 403 ATANKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLA 582
+ K R+RWT ELHE FVEAV +L G E+ATPKGVLKLMKVEGLTIYHVKSHLQKYR A
Sbjct: 117 SATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTA 296
Query: 583 K 585
+
Sbjct: 297 R 299
>gb|CX532547.1|CX532547 s13dNF73D09MJ074_271381 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 611
Score = 107 bits (230), Expect = 2e-022
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = +1 / +2
Query: 403 ATANKSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLA 582
+ K R+RWT ELHE FVEAV +L G E+ATPKGVLKLM VEGLTIYHVKSHLQKYR A
Sbjct: 431 SATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMXVEGLTIYHVKSHLQKYRTA 610
>gb|BG450990.1|BG450990 NF097F03DT1F1029 Drought Medicago truncatula cDNA clone NF097F03DT
5', mRNA sequence
Length = 646
Score = 102 bits (220), Expect = 4e-021
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = +1 / +3
Query: 430 WTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
WT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 3 WTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 158
>gb|BG453105.1|BG453105 NF090G12LF1F1097 Developing leaf Medicago truncatula cDNA clone
NF090G12LF 5', mRNA sequence
Length = 661
Score = 102 bits (220), Expect = 4e-021
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = +1 / +3
Query: 430 WTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
WT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 3 WTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 158
>gb|BG453939.1|BG453939 NF096C06LF1F1039 Developing leaf Medicago truncatula cDNA clone
NF096C06LF 5', mRNA sequence
Length = 658
Score = 102 bits (220), Expect = 4e-021
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = +1 / +3
Query: 430 WTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
WT ELHERFV+AV +L GP++ATPKGVL++M V+GLTIYHVKSHLQKYRLAK
Sbjct: 3 WTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAK 158
>gb|AJ497431.1|AJ497431 AJ497431 MTFLOW Medicago truncatula cDNA clone mt--abc955109b11,
mRNA sequence
Length = 638
Score = 101 bits (218), Expect = 8e-021
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1 / +3
Query: 415 KSRLRWTLELHERFVEAVKKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 585
K+R+RWT +LHE+FVE V +L G EKATPK +LK+M EGLTI+HVKSHLQKYR AK
Sbjct: 3 KTRIRWTKDLHEKFVECVNRLGGAEKATPKAILKMMDSEGLTIFHVKSHLQKYRTAK 173
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.314 0.132 0.386
Matrix: BLOSUM62
Number of Hits to DB: 533,202,151
Number of Sequences: 392609
Number of extensions: 6301209
Number of successful extensions: 35699
Number of sequences better than 1.0e-020: 25
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 17465466204
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 42 (22.0 bits)