TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3042568.2.1
(1174 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC170583.6| Medicago truncatula clone mth2-19b5, complet... 166 e-102
gb|AC158209.13| Medicago truncatula clone mth2-154h5, compl... 156 4e-072
gb|AC157648.18| Medicago truncatula clone mth2-68d9, comple... 151 3e-071
gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKIN... 151 8e-071
gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone m... 155 7e-070
gb|AC122723.6| Medicago truncatula clone mth2-5i15, complet... 155 8e-070
gb|AC137603.16| Medicago truncatula clone mth2-14b10, compl... 147 5e-068
gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKI... 122 3e-058
gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORK... 122 3e-058
gb|AL389186.1|AL389186 MtBC53C09R1 MtBC Medicago truncatula... 213 4e-054
gb|BG449853.1|BG449853 NF053H03IN1F1029 Insect herbivory Me... 156 2e-047
gb|CX533175.1|CX533175 s13dNF0CG12MJ088_319513 Methyl Jasmo... 189 8e-047
gb|BQ123088.1|BQ123088 EST608664 GLSD Medicago truncatula c... 145 2e-038
gb|AW688473.2|AW688473 NF008A08ST1F1000 Developing stem Med... 142 3e-035
gb|BF520841.1|BF520841 EST458314 DSIL Medicago truncatula c... 138 6e-035
gb|AL381590.1|AL381590 MtBC01H02R2 MtBC Medicago truncatula... 140 3e-032
emb|CR302584.1| mte1-21I1RM1 BAC end, cultivar Jemalong A17... 93 2e-031
gb|BI310709.1|BI310709 EST5312459 GESD Medicago truncatula ... 71 5e-030
gb|AL381589.1|AL381589 MtBC01H02F3 MtBC Medicago truncatula... 106 7e-030
emb|CR342893.1| mte1-75J4FM1 BAC end, cultivar Jemalong A17... 116 1e-029
gb|BF521212.1|BF521212 EST458760 DSIL Medicago truncatula c... 130 4e-029
gb|BQ146927.1|BQ146927 NF029F11FL1F1094 Developing flower M... 82 2e-025
gb|CG959572.1|CG959572 MBEAP05TRB mth2 Medicago truncatula ... 116 1e-024
emb|CR500324.1| mth2-177H7FM1 BAC end, cultivar Jemalong A1... 115 2e-024
emb|CR320381.1| mte1-46O24FM1 BAC end, cultivar Jemalong A1... 115 2e-024
gb|CG920826.1|CG920826 MBECG06TF mth2 Medicago truncatula g... 111 2e-023
gb|BQ147161.1|BQ147161 NF034H03FL1F1031 Developing flower M... 91 5e-023
gb|CB895104.1|CB895104 EST647896 HOGA Medicago truncatula c... 77 6e-023
>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
Length = 113632
Score = 166 bits (356), Expect(6) = e-102
Identities = 66/79 (83%), Positives = 74/79 (93%)
Frame = -1 / +2
Query: 475 IAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQAFS 296
IA AWKPV+K+LGLWK +R+LARLYDAGMGM+IF+PIA SWFPF+STFQTRL+FNQAFS
Sbjct: 16565 IAAAWKPVMKRLGLWKFIRSLARLYDAGMGMLIFVPIAFFSWFPFVSTFQTRLMFNQAFS 16744
Query: 295 RGLEISLILAGNNPNAGI* 239
RGLEISLILAGNNPN GI*
Sbjct: 16745 RGLEISLILAGNNPNTGI* 16801
Score = 117 bits (250), Expect(5) = 2e-050
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = +3 / -2
Query: 234 HHQIPAFGLLPARIRDISKPLLNAWLNRSRVWKVDMNGNHEQMAMGMKMTIPIPASXXXX 413
++ IP GL PARI++IS P L AWLN RVW VD NGNHE+ AMG KM+IP+PAS
Sbjct: 16806 YNYIPVLGLFPARIKEISNPRLKAWLNIRRVWNVDTNGNHEKNAMGTKMSIPMPASYRRA 16627
Query: 414 XXXTVFHKPNFFTTGFHAMAI 476
FH P+ F TGFHA AI
Sbjct: 16626 SDRMNFHSPSLFITGFHAAAI 16564
Score = 116 bits (247), Expect(6) = e-102
Identities = 43/53 (81%), Positives = 50/53 (94%)
Frame = -1 / +2
Query: 1090 MEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLFAPYLFNPSGFEWQK 932
+EV LLL+++LAYG+N+GGA+ YILLSISSW MALSWLFAPYLFNPSGFEWQK
Sbjct: 9704 LEVVLLLIVYLAYGYNDGGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQK 9862
Score = 79.0 bits (166), Expect(4) = 3e-026
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = -3 / +1
Query: 476 DCHGMETCREEIGFVENCSCPSSPL*CWNGDGHFHTHSHLLVVSIHIHFPDATSVQPGVQ 297
DC ME C E+ +E S + +*CW+G+ H H L VVSI I P++ V PG
Sbjct: 16564 DCCCMEACDEKARTMEVHSVACTSI*CWHGNAHLCAHCILFVVSICIDIPNSPDV*PGF* 16743
Query: 296 QRFGDISDPCWQQSKCWDLMV 234
R + +PCW+QS+ WD++V
Sbjct: 16744 PRVRNFFNPCWEQSQYWDIVV 16806
Score = 71.6 bits (150), Expect(5) = 2e-050
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +3 / -2
Query: 924 STIFCHSNPDGLNK*GAKSQDNAIIQLLIESKI*PTAPPLLNPYARKITNKSATS 1088
+T FCHSNP+GLNK*GA +QD AI QLL+ ++ +APP L P AR N+S TS
Sbjct: 9870 NTYFCHSNPEGLNK*GANNQDRAINQLLMLRRMYDSAPPSL*P*ARYTINRSTTS 9706
Score = 61.1 bits (127), Expect(4) = 3e-026
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -1 / +1
Query: 976 FAPYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGVKG 866
+A +L N S + ++V DFRDWTNWL YRGGIGVKG
Sbjct: 10156 YASHLLNFSLIVYFRVVVDFRDWTNWLLYRGGIGVKG 10266
Score = 60.6 bits (126), Expect(6) = e-102
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -1 / +2
Query: 826 HIYSIRGRILETILSLRFFIFQFGVVYHMNASGGSTALLV 707
HI S+ RI ETILSLRFFIFQ+G+VY +N G T+L V
Sbjct: 10538 HIRSLGSRIAETILSLRFFIFQYGIVYKLNIKGTDTSLTV 10657
Score = 59.3 bits (123), Expect(6) = e-102
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = -1 / +3
Query: 640 KAMVHFQLFLRXXXXXXXXXXXXXXXXXXLFTKLSVRDVFASILAFVPTGWGIISI 473
K V+FQL LR + T LSV DVFASILAF+PTGWGI+S+
Sbjct: 11742 KISVNFQLVLRFVQGLSLLLALAGLVVAIILTDLSVPDVFASILAFIPTGWGILSV 11909
Score = 59.3 bits (123), Expect(6) = e-102
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = -3 / +3
Query: 914 RLDKLAVLSRWYWC*RRRKLGSLVGRRT 831
RLDKLA L RW WC* RRKLGSLVGRRT
Sbjct: 10218 RLDKLATLQRWNWC*GRRKLGSLVGRRT 10301
Score = 51.9 bits (107), Expect(5) = 2e-050
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +3 / -1
Query: 477 EMIPHPVGTNARMEAKTSLTLSFVNKIARTRAAKTINNATLLTKRRNNWKCT 632
+ IPHPVG NA++EA TS T VN IA T+ A T R +WK T
Sbjct: 11905 DKIPHPVGMNAKIEANTSGTDRSVNIIATTKPASANKRDNPCTNRNTSWKLT 11750
Score = 51.9 bits (107), Expect(6) = e-102
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -1 / +1
Query: 1153 VRHIKFAENYRIYSRSHFVKG 1091
VRHIKF+ENYR+YSRSHFVKG
Sbjct: 8386 VRHIKFSENYRLYSRSHFVKG 8448
Score = 39.1 bits (79), Expect(5) = 2e-050
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +3 / -2
Query: 702 QYTNKAVLPPLAFMW*TTPNWKMKNLRLNMVSSIL 806
++T V P T P WKMKNLRL MVS+IL
Sbjct: 10662 KHTVNEVSVPFMLSLYTMPYWKMKNLRLRMVSAIL 10558
Score = 34.1 bits (68), Expect(4) = 3e-026
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2 / +1
Query: 627 ISNCSCVWSKV*RY*WFWLLWSWQFCLRNSV*EMFLLPF*HLCQLGGESFR 475
ISN C K + W WL+W Q + +LL F*H L GE +R
Sbjct: 11755 ISNLCCGLYKDCPFCWHWLVWL*QLY*LTYLYRTYLLLF*HSFLLDGEFYR 11907
Score = 30.9 bits (61), Expect(5) = 2e-050
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 1091 PFHKMASRINTVVLSKLDMS 1150
PF+KM +R+ +V+ KLDM+
Sbjct: 8448 PFNKMTTRVESVIFRKLDMA 8389
Score = 29.0 bits (57), Expect(4) = 3e-026
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3 / +1
Query: 827 TYLQHSREDTGNHIKPEVFHFPIRSCL 747
+Y + +D +H + E+FHFPI C+
Sbjct: 10537 SYQELGFKDCRDHPESEIFHFPIWHCV 10617
>gb|AC158209.13| Medicago truncatula clone mth2-154h5, complete sequence
Length = 93864
Score = 156 bits (336), Expect(4) = 4e-072
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = -1 / -2
Query: 1153 VRHIKFAENYRIYSRSHFVKGMEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLF 974
VRH KFA+NYR+YSRSHFVKG+E+ALLL+ ++ YG + Y LLS S W + SWLF
Sbjct: 55823 VRHEKFADNYRMYSRSHFVKGIELALLLICYMIYGAATPDSTAYALLSCSMWFLVGSWLF 55644
Query: 973 APYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGV 872
+P+LFNPSGFEWQKI ED+ DW+ W+ RGGIGV
Sbjct: 55643 SPFLFNPSGFEWQKIYEDWDDWSKWISSRGGIGV 55542
Score = 116 bits (248), Expect(4) = 4e-072
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = -1 / -3
Query: 475 IAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQAFS 296
IA A +PVVK +G+W +V+AL+R Y+ MG+VIF P+AI +WFPF+S FQTRLL+NQAFS
Sbjct: 54328 IAQACRPVVKAIGMWGSVKALSRGYEYLMGVVIFTPVAILAWFPFVSEFQTRLLYNQAFS 54149
Query: 295 RGLEISLILAGNNPN 251
RGL+I ILAG N
Sbjct: 54148 RGLQIQRILAGGKKN 54104
Score = 46.9 bits (96), Expect(4) = 4e-072
Identities = 15/34 (44%), Positives = 27/34 (79%)
Frame = -1 / -2
Query: 808 GRILETILSLRFFIFQFGVVYHMNASGGSTALLV 707
G I E +L+LRFF++Q+G+VYH++ + G +++V
Sbjct: 55472 GLIWEIVLALRFFLYQYGIVYHLHVARGDQSIMV 55371
Score = 38.2 bits (77), Expect(4) = 4e-072
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = -1 / -3
Query: 529 DVFASILAFVPTGWGIISI 473
D+FAS+LAF+PTGW ++ +
Sbjct: 54670 DIFASLLAFLPTGWALVQV 54614
>gb|AC157648.18| Medicago truncatula clone mth2-68d9, complete sequence
Length = 84361
Score = 151 bits (325), Expect(4) = 3e-071
Identities = 54/94 (57%), Positives = 73/94 (77%)
Frame = -1 / +2
Query: 1153 VRHIKFAENYRIYSRSHFVKGMEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLF 974
V H KFA+NYR+YSRSHFVKG+E+ +LL+I+ YG + + Y ++IS W +A+SWLF
Sbjct: 76685 VFHAKFADNYRMYSRSHFVKGLEILILLIIYEVYGESYRSSTLYFFITISMWFLAISWLF 76864
Query: 973 APYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGV 872
AP+LFNPSGF+WQK V+D+ DW W+ RGGIG+
Sbjct: 76865 APFLFNPSGFDWQKTVDDWSDWKRWMGNRGGIGI 76966
Score = 108 bits (231), Expect(4) = 3e-071
Identities = 44/73 (60%), Positives = 57/73 (78%)
Frame = -1 / +2
Query: 481 ISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQA 302
I IA + ++K LW +VR L+R Y+ MG++IF+P A+ SWFPF+S FQTRLLFNQA
Sbjct: 77825 IKIAQTCRGLLKWAKLWASVRELSRAYEYVMGLIIFMPTAVLSWFPFVSEFQTRLLFNQA 78004
Query: 301 FSRGLEISLILAG 263
FSRGL+IS+ILAG
Sbjct: 78005 FSRGLQISMILAG 78043
Score = 75.8 bits (159), Expect(3) = 3e-022
Identities = 35/81 (43%), Positives = 43/81 (53%)
Frame = +3 / -2
Query: 234 HHQIPAFGLLPARIRDISKPLLNAWLNRSRVWKVDMNGNHEQMAMGMKMTIPIPASXXXX 413
HH + PARI +I PLLNA LN +RVW D NGNH++ A+GMK+ PI S
Sbjct: 78072 HHSVL*VSFFPARIIEI*SPLLNA*LNSNRVWNSDTNGNHDKTAVGMKIINPITYSYALE 77893
Query: 414 XXXTVFHKPNFFTTGFHAMAI 476
T H F + H AI
Sbjct: 77892 SSLTEAHSFAHFKSPLHVCAI 77830
Score = 54.7 bits (113), Expect(3) = 3e-022
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / -2
Query: 876 PIPPR*NSQFVQSLKSSTIFCHSNPDGLNK*GAKSQDNA 992
PIPPR QSL+SST+FC S P+GLNK GA +Q+ A
Sbjct: 76962 PIPPRFPIHRFQSLQSSTVFCQSKPEGLNKNGANNQEMA 76846
Score = 53.8 bits (111), Expect(4) = 3e-071
Identities = 19/37 (51%), Positives = 30/37 (81%)
Frame = -1 / +2
Query: 817 SIRGRILETILSLRFFIFQFGVVYHMNASGGSTALLV 707
++RG+ILE +L+ RFFI+Q+G+VYH+N + S +LV
Sbjct: 77027 NVRGKILEIVLACRFFIYQYGIVYHLNIARRSKNILV 77137
Score = 40.5 bits (82), Expect(4) = 3e-071
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 541 LSVRDVFASILAFVPTGWGIISIA 470
L+V D+FAS+LAF+P+GW II ++
Sbjct: 77599 LTVSDLFASVLAFMPSGWAIILVS 77670
Score = 32.7 bits (65), Expect(3) = 3e-022
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3 / -2
Query: 738 FMW*TTPNWKMKNLRLNMVSSILPRML 818
F W*T P W +K +SSI PR L
Sbjct: 77106 FRW*TIPYW*IKKRHARTISSIFPRTL 77026
>gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 116277
Score = 151 bits (325), Expect(4) = 8e-071
Identities = 54/94 (57%), Positives = 73/94 (77%)
Frame = -1 / -1
Query: 1153 VRHIKFAENYRIYSRSHFVKGMEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLF 974
V H KFA+NYR+YSRSHFVKG+E+ +LL+I+ YG + + Y ++IS W +A+SWLF
Sbjct: 97149 VFHAKFADNYRMYSRSHFVKGLEILILLIIYEVYGESYRSSTLYFFITISMWFLAISWLF 96970
Query: 973 APYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGV 872
AP+LFNPSGF+WQK V+D+ DW W+ RGGIG+
Sbjct: 96969 APFLFNPSGFDWQKTVDDWSDWKRWMGNRGGIGI 96868
Score = 108 bits (231), Expect(4) = 8e-071
Identities = 44/73 (60%), Positives = 57/73 (78%)
Frame = -1 / -1
Query: 481 ISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQA 302
I IA + ++K LW +VR L+R Y+ MG++IF+P A+ SWFPF+S FQTRLLFNQA
Sbjct: 96009 IKIAQTCRGLLKWAKLWASVRELSRAYEYVMGLIIFMPTAVLSWFPFVSEFQTRLLFNQA 95830
Query: 301 FSRGLEISLILAG 263
FSRGL+IS+ILAG
Sbjct: 95829 FSRGLQISMILAG 95791
Score = 75.8 bits (159), Expect(3) = 5e-022
Identities = 35/81 (43%), Positives = 43/81 (53%)
Frame = +3 / +2
Query: 234 HHQIPAFGLLPARIRDISKPLLNAWLNRSRVWKVDMNGNHEQMAMGMKMTIPIPASXXXX 413
HH + PARI +I PLLNA LN +RVW D NGNH++ A+GMK+ PI S
Sbjct: 95762 HHSVL*VSFFPARIIEI*SPLLNA*LNSNRVWNSDTNGNHDKTAVGMKIINPITYSYALE 95941
Query: 414 XXXTVFHKPNFFTTGFHAMAI 476
T H F + H AI
Sbjct: 95942 SSLTEAHSFAHFKSPLHVCAI 96004
Score = 54.7 bits (113), Expect(3) = 5e-022
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 876 PIPPR*NSQFVQSLKSSTIFCHSNPDGLNK*GAKSQDNA 992
PIPPR QSL+SST+FC S P+GLNK GA +Q+ A
Sbjct: 96872 PIPPRFPIHRFQSLQSSTVFCQSKPEGLNKNGANNQEMA 96988
Score = 53.8 bits (111), Expect(4) = 8e-071
Identities = 19/37 (51%), Positives = 30/37 (81%)
Frame = -1 / -1
Query: 817 SIRGRILETILSLRFFIFQFGVVYHMNASGGSTALLV 707
++RG+ILE +L+ RFFI+Q+G+VYH+N + S +LV
Sbjct: 96807 NVRGKILEIVLACRFFIYQYGIVYHLNIARRSKNILV 96697
Score = 40.5 bits (82), Expect(4) = 8e-071
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 541 LSVRDVFASILAFVPTGWGIISIA 470
L+V D+FAS+LAF+P+GW II ++
Sbjct: 96235 LTVSDLFASVLAFMPSGWAIILVS 96164
Score = 32.7 bits (65), Expect(3) = 5e-022
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3 / +2
Query: 738 FMW*TTPNWKMKNLRLNMVSSILPRML 818
F W*T P W +K +SSI PR L
Sbjct: 96728 FRW*TIPYW*IKKRHARTISSIFPRTL 96808
>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete
sequence
Length = 103090
Score = 155 bits (332), Expect(4) = 7e-070
Identities = 57/94 (60%), Positives = 74/94 (78%)
Frame = -1 / +1
Query: 1153 VRHIKFAENYRIYSRSHFVKGMEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLF 974
V H KFA+NYR+YSRSHFVKG+E+ +LLV++ + + AV YIL+++S W M +WLF
Sbjct: 8395 VFHAKFADNYRLYSRSHFVKGIELLVLLVVYEIFSHSYRSAVAYILITVSMWFMVGTWLF 8574
Query: 973 APYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGV 872
AP+LFNPSGFEWQKIV+D+ DW W+ RGGIGV
Sbjct: 8575 APFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGV 8676
Score = 111 bits (238), Expect(4) = 7e-070
Identities = 42/74 (56%), Positives = 58/74 (78%)
Frame = -1 / +1
Query: 484 IISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQ 305
++ IA A KP+V++ G W +V+ LAR Y+ MG+++F P+A +WFPF+S FQTR+LFNQ
Sbjct: 9931 LLQIAQALKPIVRRAGFWGSVKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 10110
Query: 304 AFSRGLEISLILAG 263
AFSRGL+IS IL G
Sbjct: 10111 AFSRGLQISRILGG 10152
Score = 62.9 bits (131), Expect(4) = 4e-021
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +3 / -3
Query: 873 TPIPPR*NSQFVQSLKSSTIFCHSNPDGLNK*GAKSQ 983
TPIPPR QS++SSTIFCHSNP+GLNK GA SQ
Sbjct: 8675 TPIPPRLLIHLFQSVQSSTIFCHSNPEGLNKNGANSQ 8565
Score = 59.3 bits (123), Expect(4) = 4e-021
Identities = 31/73 (42%), Positives = 38/73 (52%)
Frame = +3 / -3
Query: 258 LLPARIRDISKPLLNAWLNRSRVWKVDMNGNHEQMAMGMKMTIPIPASXXXXXXXTVFHK 437
L P RIR+I KPLLNAWLN RV + GN + A G+ + P+ S T
Sbjct: 10157 LCPPRIREICKPLLNAWLNSIRV*NSETKGNQARKATGVNRSKPMTIS*PRARVFTDPQN 9978
Query: 438 PNFFTTGFHAMAI 476
P T GF+A AI
Sbjct: 9977 PARRTIGFNACAI 9939
Score = 49.2 bits (101), Expect(4) = 7e-070
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = -1 / +1
Query: 814 IRGRILETILSLRFFIFQFGVVYHMN 737
IRG I+E +LSLRFFI+Q+G+VYH+N
Sbjct: 8740 IRGIIVEILLSLRFFIYQYGLVYHLN 8817
Score = 35.0 bits (70), Expect(4) = 7e-070
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 541 LSVRDVFASILAFVPTGWGIISI 473
++ +D+ ILAF+PTGWG++ +
Sbjct: 9299 MTPQDIIVCILAFMPTGWGMLQV 9367
Score = 31.3 bits (62), Expect(4) = 4e-021
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3 / -3
Query: 1068 TNKSATSIPFTKWLRE*IR*FSANLICRT 1154
T+ + +SIP TK LRE* * SANL +T
Sbjct: 8480 TSNTKSSIPLTK*LRE*SL*LSANLAWKT 8394
Score = 31.3 bits (62), Expect(4) = 4e-021
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3 / -2
Query: 483 IPHPVGTNARMEAKTSLTLSFVNKIARTRAAKTINNATLLTKRRNNWKCTMAL 641
IP PVG ARM+ S + I TR A + N L R+ + K + L
Sbjct: 9357 IPQPVGMKARMQTIMSCGVICGRAIKMTRIAIKVTNIIPLINRKTS*KFALNL 9199
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence
Length = 105353
Score = 155 bits (332), Expect(4) = 8e-070
Identities = 57/94 (60%), Positives = 74/94 (78%)
Frame = -1 / +1
Query: 1153 VRHIKFAENYRIYSRSHFVKGMEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLF 974
V H KFA+NYR+YSRSHFVKG+E+ +LLV++ + + AV YIL+++S W M +WLF
Sbjct: 79792 VFHAKFADNYRLYSRSHFVKGIELLVLLVVYEIFSHSYRSAVAYILITVSMWFMVGTWLF 79971
Query: 973 APYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGV 872
AP+LFNPSGFEWQKIV+D+ DW W+ RGGIGV
Sbjct: 79972 APFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGV 80073
Score = 111 bits (238), Expect(4) = 8e-070
Identities = 42/74 (56%), Positives = 58/74 (78%)
Frame = -1 / +1
Query: 484 IISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQ 305
++ IA A KP+V++ G W +V+ LAR Y+ MG+++F P+A +WFPF+S FQTR+LFNQ
Sbjct: 81328 LLQIAQALKPIVRRAGFWGSVKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 81507
Query: 304 AFSRGLEISLILAG 263
AFSRGL+IS IL G
Sbjct: 81508 AFSRGLQISRILGG 81549
Score = 62.9 bits (131), Expect(4) = 4e-021
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +3 / -1
Query: 873 TPIPPR*NSQFVQSLKSSTIFCHSNPDGLNK*GAKSQ 983
TPIPPR QS++SSTIFCHSNP+GLNK GA SQ
Sbjct: 80072 TPIPPRLLIHLFQSVQSSTIFCHSNPEGLNKNGANSQ 79962
Score = 59.3 bits (123), Expect(4) = 4e-021
Identities = 31/73 (42%), Positives = 38/73 (52%)
Frame = +3 / -1
Query: 258 LLPARIRDISKPLLNAWLNRSRVWKVDMNGNHEQMAMGMKMTIPIPASXXXXXXXTVFHK 437
L P RIR+I KPLLNAWLN RV + GN + A G+ + P+ S T
Sbjct: 81554 LCPPRIREICKPLLNAWLNSIRV*NSETKGNQARKATGVNRSKPMTIS*PRARVFTDPQN 81375
Query: 438 PNFFTTGFHAMAI 476
P T GF+A AI
Sbjct: 81374 PARRTIGFNACAI 81336
Score = 49.2 bits (101), Expect(4) = 8e-070
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = -1 / +1
Query: 814 IRGRILETILSLRFFIFQFGVVYHMN 737
IRG I+E +LSLRFFI+Q+G+VYH+N
Sbjct: 80137 IRGIIVEILLSLRFFIYQYGLVYHLN 80214
Score = 35.0 bits (70), Expect(4) = 8e-070
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 541 LSVRDVFASILAFVPTGWGIISI 473
++ +D+ ILAF+PTGWG++ +
Sbjct: 80696 MTPQDIIVCILAFMPTGWGMLQV 80764
Score = 31.3 bits (62), Expect(4) = 4e-021
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3 / -1
Query: 1068 TNKSATSIPFTKWLRE*IR*FSANLICRT 1154
T+ + +SIP TK LRE* * SANL +T
Sbjct: 79877 TSNTKSSIPLTK*LRE*SL*LSANLAWKT 79791
Score = 31.3 bits (62), Expect(4) = 4e-021
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3 / -3
Query: 483 IPHPVGTNARMEAKTSLTLSFVNKIARTRAAKTINNATLLTKRRNNWKCTMAL 641
IP PVG ARM+ S + I TR A + N L R+ + K + L
Sbjct: 80754 IPQPVGMKARMQTIMSCGVICGRAIKMTRIAIKVTNIIPLINRKTS*KFALNL 80596
>gb|AC137603.16| Medicago truncatula clone mth2-14b10, complete sequence
Length = 109793
Score = 147 bits (316), Expect(4) = 5e-068
Identities = 52/94 (55%), Positives = 71/94 (75%)
Frame = -1 / -1
Query: 1153 VRHIKFAENYRIYSRSHFVKGMEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLF 974
V H KFA+NYR+YSRSHFVKG+E+ +LL+++ +G + Y+L++ W M +WL+
Sbjct: 61667 VFHAKFADNYRLYSRSHFVKGIELMILLIVYQIFGNGYRSGLSYLLITTPMWFMVGTWLY 61488
Query: 973 APYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGV 872
AP+LFNPSGFEWQKIV+D+ DW W+ RGGIGV
Sbjct: 61487 APFLFNPSGFEWQKIVDDWTDWNKWISIRGGIGV 61386
Score = 116 bits (247), Expect(3) = 1e-035
Identities = 43/53 (81%), Positives = 50/53 (94%)
Frame = -1 / -3
Query: 1090 MEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLFAPYLFNPSGFEWQK 932
+EV LLL+++LAYG+N+GGA+ YILLSISSW MALSWLFAPYLFNPSGFEWQK
Sbjct: 576 LEVVLLLIVYLAYGYNDGGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQK 418
Score = 111 bits (237), Expect(4) = 5e-068
Identities = 43/74 (58%), Positives = 59/74 (79%)
Frame = -1 / -3
Query: 484 IISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQ 305
I+ IA A KP+V++ G W++V+ LAR Y+ MG+++F P+A +WFPF+S FQTR+LFNQ
Sbjct: 60207 IMQIAQALKPLVRRGGFWESVKTLARGYEVIMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 60028
Query: 304 AFSRGLEISLILAG 263
AFSRGL+IS IL G
Sbjct: 60027 AFSRGLQISRILGG 59986
Score = 51.9 bits (107), Expect(3) = 1e-035
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -1 / -2
Query: 1153 VRHIKFAENYRIYSRSHFVKG 1091
VRHIKF+ENYR+YSRSHFVKG
Sbjct: 1894 VRHIKFSENYRLYSRSHFVKG 1832
Score = 50.1 bits (103), Expect(4) = 5e-068
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = -1 / -1
Query: 814 IRGRILETILSLRFFIFQFGVVYHMNASGGSTALLV 707
+RG I E +LSLRFFI+Q+G+VYH+N + + ++LV
Sbjct: 61322 MRGIIAEILLSLRFFIYQYGLVYHLNFTKSTKSVLV 61215
Score = 41.4 bits (84), Expect(3) = 1e-035
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -3 / -1
Query: 914 RLDKLAVLSRWYWC*RRRKL 855
RLDKLA L RW WC* RRKL
Sbjct: 62 RLDKLATLQRWNWC*GRRKL 3
Score = 35.9 bits (72), Expect(4) = 5e-068
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = -1 / -2
Query: 541 LSVRDVFASILAFVPTGWGIISI 473
++++D+ ILAF+PTGWG++ +
Sbjct: 60517 MTLQDIVVCILAFMPTGWGMLQV 60449
>gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKING DRAFT SEQUENCE
Length = 118519
Score = 122 bits (261), Expect(4) = 3e-058
Identities = 47/96 (48%), Positives = 66/96 (68%)
Frame = -1 / -1
Query: 550 FTKLSVRDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFI 371
FT+ D+F S+LAF+PTGWG++ IA ++P ++ +W V A+ARLYD G++I
Sbjct: 10822 FTEFKFVDIFTSLLAFLPTGWGLLLIAQVFRPFLQSTIIWSGVVAVARLYDILFGVIIMT 10643
Query: 370 PIAICSWFPFISTFQTRLLFNQAFSRGLEISLILAG 263
P+A+ SW P QTR+LFN+AFSRGL IS I+ G
Sbjct: 10642 PVALLSWLPGFQNMQTRILFNEAFSRGLRISQIVTG 10535
Score = 81.3 bits (171), Expect(4) = 3e-058
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = -1 / -1
Query: 1024 YILLSISSWIMALSWLFAPYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGVK 869
YI L+I+SW + SW+ AP++FNPSGF+W K V DF D+ NW++Y G + K
Sbjct: 11305 YIALTITSWFLVASWVVAPFVFNPSGFDWLKTVYDFDDFMNWIWYSGSVFAK 11150
Score = 58.3 bits (121), Expect(4) = 3e-058
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -1 / -1
Query: 808 GRILETILSLRFFIFQFGVVYHMNASGGSTALLVYWISW 692
G++LE IL LRFF FQ+G+VY + S G+ ++ VY +SW
Sbjct: 11083 GKLLEIILDLRFFFFQYGIVYQLGISAGNNSIAVYLLSW 10967
Score = 50.1 bits (103), Expect(4) = 3e-058
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -1 / -1
Query: 1153 VRHIKFAENYRIYSRSHFVKGMEVALLLVIFLAY 1052
V H FAE YR++SRSHFVK +E+ L+LVI+ +
Sbjct: 11434 VEHKSFAEIYRLFSRSHFVKAIELGLILVIYATH 11333
>gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORKING DRAFT SEQUENCE, 3
unordered pieces
Length = 118726
Score = 122 bits (261), Expect(4) = 3e-058
Identities = 47/96 (48%), Positives = 66/96 (68%)
Frame = -1 / +3
Query: 550 FTKLSVRDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFI 371
FT+ D+F S+LAF+PTGWG++ IA ++P ++ +W V A+ARLYD G++I
Sbjct: 21975 FTEFKFVDIFTSLLAFLPTGWGLLLIAQVFRPFLQSTIIWSGVVAVARLYDILFGVIIMT 22154
Query: 370 PIAICSWFPFISTFQTRLLFNQAFSRGLEISLILAG 263
P+A+ SW P QTR+LFN+AFSRGL IS I+ G
Sbjct: 22155 PVALLSWLPGFQNMQTRILFNEAFSRGLRISQIVTG 22262
Score = 81.3 bits (171), Expect(4) = 3e-058
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = -1 / +3
Query: 1024 YILLSISSWIMALSWLFAPYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGVK 869
YI L+I+SW + SW+ AP++FNPSGF+W K V DF D+ NW++Y G + K
Sbjct: 21492 YIALTITSWFLVASWVVAPFVFNPSGFDWLKTVYDFDDFMNWIWYSGSVFAK 21647
Score = 58.3 bits (121), Expect(4) = 3e-058
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -1 / +3
Query: 808 GRILETILSLRFFIFQFGVVYHMNASGGSTALLVYWISW 692
G++LE IL LRFF FQ+G+VY + S G+ ++ VY +SW
Sbjct: 21714 GKLLEIILDLRFFFFQYGIVYQLGISAGNNSIAVYLLSW 21830
Score = 50.1 bits (103), Expect(4) = 3e-058
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -1 / +3
Query: 1153 VRHIKFAENYRIYSRSHFVKGMEVALLLVIFLAY 1052
V H FAE YR++SRSHFVK +E+ L+LVI+ +
Sbjct: 21363 VEHKSFAEIYRLFSRSHFVKAIELGLILVIYATH 21464
>gb|AL389186.1|AL389186 MtBC53C09R1 MtBC Medicago truncatula cDNA clone MtBC53C09 T7, mRNA
sequence
Length = 544
Score = 213 bits (460), Expect = 4e-054
Identities = 86/103 (83%), Positives = 96/103 (93%)
Frame = -1 / +1
Query: 547 TKLSVRDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIP 368
T LSV DVFASILAF+PTGWGI+SIA AWKPV+K+LGLWK +R+LARLYDAGMGM+IF+P
Sbjct: 73 TDLSVPDVFASILAFIPTGWGILSIAAAWKPVMKRLGLWKFIRSLARLYDAGMGMLIFVP 252
Query: 367 IAICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAGI* 239
IA SWFPF+STFQTRL+FNQAFSRGLEISLILAGNNPN GI*
Sbjct: 253 IAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI* 381
Score = 156 bits (336), Expect = 5e-037
Identities = 68/126 (53%), Positives = 80/126 (63%)
Frame = +3 / -3
Query: 234 HHQIPAFGLLPARIRDISKPLLNAWLNRSRVWKVDMNGNHEQMAMGMKMTIPIPASXXXX 413
++ IP GL PARI++IS P L AWLN RVW VD NGNHE+ AMG KM+IP+PAS
Sbjct: 386 YNYIPVLGLFPARIKEISNPRLKAWLNIRRVWNVDTNGNHEKNAMGTKMSIPMPASYRRA 207
Query: 414 XXXTVFHKPNFFTTGFHAMAIEMIPHPVGTNARMEAKTSLTLSFVNKIARTRAAKTINNA 593
FH P+ F TGFHA AI+ IPHPVG NA++EA TS T VN IA T+ A
Sbjct: 206 SDRMNFHSPSLFITGFHAAAIDKIPHPVGMNAKIEANTSGTDRSVNIIATTKPASANKRD 27
Query: 594 TLLTKR 611
T R
Sbjct: 26 NPCTNR 9
Score = 104 bits (222), Expect = 3e-021
Identities = 45/116 (38%), Positives = 64/116 (55%)
Frame = -3 / +3
Query: 581 GFGCSGPGNFVYETQCERCFCFHSSICANWVGNHFDCHGMETCREEIGFVENCSCPSSPL 402
G G G N++ C CF+ SI + W+GN DC ME C E+ +E S + +
Sbjct: 39 GTGWFGCSNYIN*PICTGRICFYFSIHSYWMGNFIDCCCMEACDEKARTMEVHSVACTSI 218
Query: 401 *CWNGDGHFHTHSHLLVVSIHIHFPDATSVQPGVQQRFGDISDPCWQQSKCWDLMV 234
*CW+G+ H H L VVSI I P++ V PG R + +PCW+QS+ WD++V
Sbjct: 219 *CWHGNAHLCAHCILFVVSICIDIPNSPDV*PGF*PRVRNFFNPCWEQSQYWDIVV 386
>gb|BG449853.1|BG449853 NF053H03IN1F1029 Insect herbivory Medicago truncatula cDNA clone
NF053H03IN 5', mRNA sequence
Length = 646
Score = 156 bits (335), Expect(2) = 2e-047
Identities = 58/94 (61%), Positives = 75/94 (79%)
Frame = -1 / +3
Query: 1153 VRHIKFAENYRIYSRSHFVKGMEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLF 974
V H KFA+NYR+YSRSHFVKG+E+ +LLV++ +G G V YIL++I+ W MA +WLF
Sbjct: 57 VFHAKFADNYRLYSRSHFVKGIELVILLVVYHIFGHAYRGVVAYILITITIWFMAGTWLF 236
Query: 973 APYLFNPSGFEWQKIVEDFRDWTNWLFYRGGIGV 872
AP+LFNPSGFEWQKI++D+ DW W+ RGGIGV
Sbjct: 237 APFLFNPSGFEWQKILDDWTDWHKWISNRGGIGV 338
Score = 55.6 bits (115), Expect(2) = 2e-047
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = -1 / +3
Query: 814 IRGRILETILSLRFFIFQFGVVYHMNASGGSTALLVYWISW 692
+RG E IL+LRFFI+Q+G+VYH++ + ++LVY ISW
Sbjct: 402 MRGIATEIILALRFFIYQYGLVYHLSITRSHQSVLVYGISW 524
>gb|CX533175.1|CX533175 s13dNF0CG12MJ088_319513 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 611
Score = 189 bits (407), Expect = 8e-047
Identities = 74/100 (74%), Positives = 88/100 (88%)
Frame = -1 / +2
Query: 550 FTKLSVRDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFI 371
FT LS+ D+FASILAF+PTGWGI+S+A+ WK ++K LGLW++VR AR+YDAGMGM+IF
Sbjct: 41 FTPLSIPDLFASILAFIPTGWGILSLAITWKGIMKSLGLWESVREFARMYDAGMGMIIFS 220
Query: 370 PIAICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPN 251
PIA SWFPFISTFQ+RLLFNQAFSRGLEISLIL+GN N
Sbjct: 221 PIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILSGNKAN 340
Score = 116 bits (248), Expect = 7e-025
Identities = 54/111 (48%), Positives = 66/111 (59%)
Frame = +3 / -3
Query: 243 IPAFGLLPARIRDISKPLLNAWLNRSRVWKVDMNGNHEQMAMGMKMTIPIPASXXXXXXX 422
+ L P R+R+IS+P L A LNRSR WKV+MNGNH++ A+G K+ IPIPAS
Sbjct: 348 VSTLALFPERMREISRPRLKA*LNRSRDWKVEMNGNHDKNAIGEKIIIPIPASYILANSR 169
Query: 423 TVFHKPNFFTTGFHAMAIEMIPHPVGTNARMEAKTSLTLSFVNKIARTRAA 575
T +P F FH +A + IPHPVG ARM AK S S V R AA
Sbjct: 168 TDSQRPRLFIIPFHVIAKDNIPHPVGIKARMLAKRSGIESGVKATTRHTAA 16
>gb|BQ123088.1|BQ123088 EST608664 GLSD Medicago truncatula cDNA clone pGLSD-31G15, mRNA
sequence
Length = 673
Score = 145 bits (311), Expect(2) = 2e-038
Identities = 58/121 (47%), Positives = 78/121 (64%)
Frame = -1 / +2
Query: 625 FQLFLRXXXXXXXXXXXXXXXXXXLFTKLSVRDVFASILAFVPTGWGIISIAMAWKPVVK 446
FQL R ++++D+ ILA +PTGWG++ IA A KP++
Sbjct: 149 FQLVFRLIEGSIFITFLATLIILIAVANMTIKDIIICILAVMPTGWGMLQIAQACKPLIA 328
Query: 445 KLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQAFSRGLEISLILA 266
K GLW +VRALAR Y+ MG+++F P+A +WFPF+S FQTR+LFNQAFSRGL+IS IL
Sbjct: 329 KTGLWGSVRALARGYEVIMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILG 508
Query: 265 G 263
G
Sbjct: 509 G 511
Score = 36.3 bits (73), Expect(2) = 2e-038
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = -1 / +2
Query: 769 IFQFGVVYHMNASGGSTALLVYWISW 692
I+Q+G+VYH++ + ++LVY ISW
Sbjct: 2 IYQYGLVYHLSITRSHFSVLVYGISW 79
>gb|AW688473.2|AW688473 NF008A08ST1F1000 Developing stem Medicago truncatula cDNA clone
NF008A08ST 5', mRNA sequence
Length = 788
Score = 142 bits (305), Expect(2) = 3e-035
Identities = 57/121 (47%), Positives = 77/121 (63%)
Frame = -1 / +2
Query: 625 FQLFLRXXXXXXXXXXXXXXXXXXLFTKLSVRDVFASILAFVPTGWGIISIAMAWKPVVK 446
FQL R ++++D+ ILA +PTGWG++ IA A KP++
Sbjct: 308 FQLVFRLIEGSIFITFLATLIILIAVANMTIKDIIICILAVMPTGWGMLQIAQACKPLIA 487
Query: 445 KLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQAFSRGLEISLILA 266
K GLW +VR LAR Y+ MG+++F PIA +WFPF+S FQTR+LFNQAFS+GL+IS IL
Sbjct: 488 KTGLWGSVRXLARGYEVIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSKGLQISRILG 667
Query: 265 G 263
G
Sbjct: 668 G 670
Score = 28.1 bits (55), Expect(2) = 3e-035
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1 / +2
Query: 775 FFIFQFGVVYHMNASGGSTALLVYWISW 692
F +VYH++ + ++LVY ISW
Sbjct: 155 FSYINMDLVYHLSITRSHQSVLVYGISW 238
>gb|BF520841.1|BF520841 EST458314 DSIL Medicago truncatula cDNA clone pDSIL-39F19, mRNA
sequence
Length = 474
Score = 138 bits (296), Expect(2) = 6e-035
Identities = 56/68 (82%), Positives = 62/68 (91%)
Frame = -1 / +1
Query: 442 LGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQAFSRGLEISLILAG 263
L LWK + +LARLYDAGMGM+IF+PIA SWFPF+STFQTRL+FNQAFSRGLEISLILAG
Sbjct: 76 LPLWKLILSLARLYDAGMGMLIFVPIAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAG 255
Query: 262 NNPNAGI* 239
NNPN GI*
Sbjct: 256 NNPNTGI* 279
Score = 31.3 bits (62), Expect(2) = 6e-035
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 514 ILAFVPTGWGII 479
ILAF+PTGWGI+
Sbjct: 2 ILAFIPTGWGIL 37
>gb|AL381590.1|AL381590 MtBC01H02R2 MtBC Medicago truncatula cDNA clone MtBC01H02 T7, mRNA
sequence
Length = 548
Score = 140 bits (301), Expect = 3e-032
Identities = 52/93 (55%), Positives = 73/93 (78%)
Frame = -1 / +2
Query: 541 LSVRDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIA 362
++ +D+ ILAF+PTGWG++ IA A KP+V++ G W +V+ LAR Y+ MG+++F P+A
Sbjct: 83 MTPQDIIVCILAFMPTGWGMLQIAQALKPIVRRAGFWGSVKTLARGYEIVMGLLLFTPVA 262
Query: 361 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAG 263
+WFPF+S FQTR+LFNQAFSRGL+IS IL G
Sbjct: 263 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG 361
>emb|CR302584.1| mte1-21I1RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 651
Score = 93.2 bits (197), Expect(3) = 2e-031
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = -1 / -1
Query: 550 FTKLSVRDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFI 371
FT+ D+F S+LAF+PTGWG++ IA ++P ++ +W V A+ARLYD G++I
Sbjct: 234 FTEFKFVDIFTSLLAFLPTGWGLLLIAQVFRPFLQSTIIWSGVVAVARLYDILFGVIIMT 55
Query: 370 PIAICSWFPFISTFQTRL 317
P+A+ SW P QTR+
Sbjct: 54 PVALLSWLPGFQNMQTRI 1
Score = 58.3 bits (121), Expect(3) = 2e-031
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -1 / -1
Query: 808 GRILETILSLRFFIFQFGVVYHMNASGGSTALLVYWISW 692
G++LE IL LRFF FQ+G+VY + S G+ ++ VY +SW
Sbjct: 495 GKLLEIILDLRFFFFQYGIVYQLGISAGNNSIAVYLLSW 379
Score = 29.0 bits (57), Expect(3) = 2e-031
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 955 PSGFEWQKIVEDFRDW 908
PSGF+W K V DF D+
Sbjct: 649 PSGFDWLKTVYDFDDF 602
>gb|BI310709.1|BI310709 EST5312459 GESD Medicago truncatula cDNA clone pGESD8H8 5' end,
mRNA sequence
Length = 591
Score = 70.7 bits (148), Expect(4) = 5e-030
Identities = 25/55 (45%), Positives = 41/55 (74%)
Frame = -1 / +3
Query: 541 LSVRDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVI 377
++++D+ ILAF+PTGWG++ IA A KP+V++ G W++V+ LAR Y+ MG +
Sbjct: 387 MTLQDIVVCILAFMPTGWGMLQIAQALKPLVRRGGFWESVKTLARGYEVIMGFAL 551
Score = 61.1 bits (127), Expect(4) = 5e-030
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = -1 / +3
Query: 814 IRGRILETILSLRFFIFQFGVVYHMNASGGSTALLVYWISW 692
+RG I E +LSLRFFI+Q+G+VYH+N + + ++LVY ISW
Sbjct: 111 MRGIIAEILLSLRFFIYQYGLVYHLNFTKSTKSVLVYGISW 233
Score = 31.8 bits (63), Expect(4) = 5e-030
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -1 / +1
Query: 388 GMVIFIPIAICSWFPFI 338
G+++F P+A +WFPF+
Sbjct: 541 GLLLFTPVAFLAWFPFV 591
Score = 29.5 bits (58), Expect(4) = 5e-030
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 913 DWTNWLFYRGGIGV 872
DW W+ RGGIGV
Sbjct: 6 DWNKWISIRGGIGV 47
>gb|AL381589.1|AL381589 MtBC01H02F3 MtBC Medicago truncatula cDNA clone MtBC01H02 T3, mRNA
sequence
Length = 502
Score = 106 bits (227), Expect(3) = 7e-030
Identities = 37/74 (50%), Positives = 56/74 (75%)
Frame = -1 / +2
Query: 541 LSVRDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIA 362
++ +D+ ILAF+PTGWG++ IA A KP+V++ G W +V+ LAR Y+ MG+++F P+A
Sbjct: 281 MTPQDIIVCILAFMPTGWGMLQIAQALKPIVRRAGFWGSVKTLARGYEIVMGLLLFTPVA 460
Query: 361 ICSWFPFISTFQTR 320
+WFPF+S FQTR
Sbjct: 461 FLAWFPFVSEFQTR 502
Score = 45.1 bits (92), Expect(3) = 7e-030
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = -1 / +2
Query: 808 GRILETILSLRFFIFQFGVVYHMN 737
G I+E +LSLRFFI+Q+G+VYH+N
Sbjct: 8 GIIVEILLSLRFFIYQYGLVYHLN 79
Score = 22.1 bits (42), Expect(3) = 7e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / +2
Query: 727 GSTALLVYWISW 692
GS + LVY ISW
Sbjct: 92 GSKSFLVYGISW 127
>emb|CR342893.1| mte1-75J4FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 724
Score = 116 bits (248), Expect(2) = 1e-029
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = -1 / -1
Query: 475 IAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQAFS 296
IA A +PVVK +G+W +V+AL+R Y+ MG+VIF P+AI +WFPF+S FQTRLL+NQAFS
Sbjct: 376 IAQACRPVVKAIGMWGSVKALSRGYEYLMGVVIFTPVAILAWFPFVSEFQTRLLYNQAFS 197
Query: 295 RGLEISLILAGNNPN 251
RGL+I ILAG N
Sbjct: 196 RGLQIQRILAGGKKN 152
Score = 38.2 bits (77), Expect(2) = 1e-029
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 529 DVFASILAFVPTGWGIISI 473
D+FAS+LAF+PTGW ++ +
Sbjct: 718 DIFASLLAFLPTGWALVQV 662
>gb|BF521212.1|BF521212 EST458760 DSIL Medicago truncatula cDNA clone pDSIL-41P20, mRNA
sequence
Length = 342
Score = 130 bits (279), Expect = 4e-029
Identities = 48/80 (60%), Positives = 63/80 (78%)
Frame = -1 / +1
Query: 1111 RSHFVKGMEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLFAPYLFNPSGFEWQK 932
RSHFVKG+E+ +LLV++ +G G V YIL++I+ W MA +WLFAP+LFNPSGFEWQK
Sbjct: 1 RSHFVKGIELVILLVVYHIFGHAYRGVVAYILITITIWFMAGTWLFAPFLFNPSGFEWQK 180
Query: 931 IVEDFRDWTNWLFYRGGIGV 872
I++D+ DW W+ RGGIGV
Sbjct: 181 ILDDWTDWHKWISNRGGIGV 240
>gb|BQ146927.1|BQ146927 NF029F11FL1F1094 Developing flower Medicago truncatula cDNA clone
NF029F11FL 5', mRNA sequence
Length = 694
Score = 82.2 bits (173), Expect(2) = 2e-025
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = -1 / +3
Query: 550 FTKLSVRDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFI 371
FT+ D+F S+LAF+PTGWG++ IA ++P ++ +W V A ARLYD G++I
Sbjct: 384 FTEFKFVDIFTSLLAFLPTGWGLLLIAQVFRPFLQSTIIWSGVXAXARLYDILFGVIIMT 563
Query: 370 PIAICSWFPFISTFQTRLLFNQAFSRG 290
P A+ S ++S + F+ S G
Sbjct: 564 PXALLSXGAWLSKYANLXFFSTKHSXG 644
Score = 58.3 bits (121), Expect(2) = 2e-025
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -1 / +3
Query: 808 GRILETILSLRFFIFQFGVVYHMNASGGSTALLVYWISW 692
G++LE IL LRFF FQ+G+VY + S G+ ++ VY +SW
Sbjct: 123 GKLLEIILXLRFFFFQYGIVYQLGISAGNNSIAVYLLSW 239
>gb|CG959572.1|CG959572 MBEAP05TRB mth2 Medicago truncatula genomic clone 14B10, DNA sequence
Length = 521
Score = 116 bits (247), Expect = 1e-024
Identities = 43/53 (81%), Positives = 50/53 (94%)
Frame = -1 / -2
Query: 1090 MEVALLLVIFLAYGFNNGGAVGYILLSISSWIMALSWLFAPYLFNPSGFEWQK 932
+EV LLL+++LAYG+N+GGA+ YILLSISSW MALSWLFAPYLFNPSGFEWQK
Sbjct: 196 LEVVLLLIVYLAYGYNDGGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQK 38
>emb|CR500324.1| mth2-177H7FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 638
Score = 115 bits (245), Expect = 2e-024
Identities = 45/73 (61%), Positives = 58/73 (79%)
Frame = -1 / -1
Query: 481 ISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQA 302
+ IA A KP++ K GLW +VRALAR Y+ MG+++F P+A +WFPF+S FQTR+LFNQA
Sbjct: 617 VKIAQACKPLIAKTGLWGSVRALARGYEVIMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 438
Query: 301 FSRGLEISLILAG 263
FSRGL+IS IL G
Sbjct: 437 FSRGLQISRILGG 399
>emb|CR320381.1| mte1-46O24FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 888
Score = 115 bits (245), Expect = 2e-024
Identities = 45/73 (61%), Positives = 58/73 (79%)
Frame = -1 / -1
Query: 481 ISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQA 302
+ IA A KP++ K GLW +VRALAR Y+ MG+++F P+A +WFPF+S FQTR+LFNQA
Sbjct: 762 VKIAQACKPLIAKTGLWGSVRALARGYEVIMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 583
Query: 301 FSRGLEISLILAG 263
FSRGL+IS IL G
Sbjct: 582 FSRGLQISRILGG 544
>gb|CG920826.1|CG920826 MBECG06TF mth2 Medicago truncatula genomic clone 25B11, DNA
sequence
Length = 802
Score = 111 bits (237), Expect = 2e-023
Identities = 43/74 (58%), Positives = 59/74 (79%)
Frame = -1 / -1
Query: 484 IISIAMAWKPVVKKLGLWKTVRALARLYDAGMGMVIFIPIAICSWFPFISTFQTRLLFNQ 305
I+ IA A KP+V++ G W++V+ LAR Y+ MG+++F P+A +WFPF+S FQTR+LFNQ
Sbjct: 700 IMQIAQALKPLVRRGGFWESVKTLARGYEVIMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 521
Query: 304 AFSRGLEISLILAG 263
AFSRGL+IS IL G
Sbjct: 520 AFSRGLQISRILGG 479
>gb|BQ147161.1|BQ147161 NF034H03FL1F1031 Developing flower Medicago truncatula cDNA clone
NF034H03FL 5', mRNA sequence
Length = 266
Score = 91.3 bits (193), Expect(2) = 5e-023
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = -1 / +2
Query: 1069 VIFLAYGFNNGGAVGYILLSISSWIMALSWLFAPYLFNPSGFEWQKIVEDFRDWTNW 899
V++ + + AV YIL+++S W M +WLFAP+LFNPSGFEWQKIV+D+ DW W
Sbjct: 95 VVYEIFXHSYRSAVAYILITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKW 265
Score = 38.6 bits (78), Expect(2) = 5e-023
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = -1 / +3
Query: 1132 ENYRIYSRSHFVKGMEVALLLVIFLAY 1052
+NYR+YSRSHFVKG+E + +++ +
Sbjct: 30 DNYRLYSRSHFVKGIEPLGITLLYTKF 110
>gb|CB895104.1|CB895104 EST647896 HOGA Medicago truncatula cDNA clone HOGA-33J7, mRNA
sequence
Length = 440
Score = 76.7 bits (161), Expect(2) = 6e-023
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = -1 / -1
Query: 625 FQLFLRXXXXXXXXXXXXXXXXXXLFTKLSVRDVFASILAFVPTGWGIISIAMAWKPVVK 446
FQL R ++++D+ ILA +PTGWG++ IA A KP++
Sbjct: 251 FQLVFRLIEGSIFITFLATLIILIAVANMTIKDIIICILAVMPTGWGMLQIAQACKPLIA 72
Query: 445 KLGLWKTVRALARLYDAGMGMVI 377
K GLW +VRALAR Y+ MG+++
Sbjct: 71 KTGLWGSVRALARGYEVIMGLLL 3
Score = 52.8 bits (109), Expect(2) = 6e-023
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -1 / -3
Query: 808 GRILETILSLRFFIFQFGVVYHMNASGGSTALLVYWISW 692
G E IL+LRFFI+Q+G+VYH++ + ++LVY ISW
Sbjct: 438 GIATEIILALRFFIYQYGLVYHLSITRSHQSVLVYGISW 322
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,268,613,916
Number of Sequences: 392609
Number of extensions: 19636996
Number of successful extensions: 72127
Number of sequences better than 1.0e-020: 35
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 42093030060
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)