TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2762970.2.1
(578 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ146788.1|BQ146788 NF028C08FL1F1065 Developing flower M... 196 4e-075
gb|AW687058.1|AW687058 NF005E09RT1F1070 Developing root Med... 193 3e-072
gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone m... 130 4e-065
gb|BM779905.1|BM779905 EST590481 KV2 Medicago truncatula cD... 186 3e-058
gb|BM779899.1|BM779899 EST590475 KV2 Medicago truncatula cD... 186 3e-054
emb|CT033766.1| Medicago truncatula chromosome 5 clone mth4... 114 9e-042
gb|CG953701.1|CG953701 MBELK15TF mth2 Medicago truncatula g... 116 8e-039
emb|CR315610.1| mte1-4K11RM1 BAC end, cultivar Jemalong A17... 129 6e-029
>gb|BQ146788.1|BQ146788 NF028C08FL1F1065 Developing flower Medicago truncatula cDNA clone
NF028C08FL 5', mRNA sequence
Length = 604
Score = 196 bits (424), Expect(3) = 4e-075
Identities = 82/102 (80%), Positives = 90/102 (88%)
Frame = +2 / +3
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
P+SRIDDAV RILRVKFTMGLFENP D SL +LG +EHRELAREAVRKSLVLLKNGK
Sbjct: 72 PISRIDDAVARILRVKFTMGLFENPLADLSLINQLGSKEHRELAREAVRKSLVLLKNGKY 251
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGN 307
+ PLLPLPKKA K+LVAGSHA++LGNQCGGWTITWQG SG+
Sbjct: 252 ANKPLLPLPKKASKVLVAGSHADNLGNQCGGWTITWQGLSGS 377
Score = 127 bits (274), Expect(2) = 2e-039
Identities = 60/97 (61%), Positives = 67/97 (69%)
Frame = -3 / -1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
C VIVHPPH LP+ A LPAT+ AF GRGS+G LPFF TRDF TAS A+S CS
Sbjct: 361 CQVIVHPPH*LPKLSA*LPATKTFEAFLGRGSSGLFAYLPFFSNTRDFRTASLANSLCSL 182
Query: 111 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
P+ RL S GFS RPMVN T +IL TASSILL+G
Sbjct: 181 LPNWFMRLRSASGFSKRPMVNFTLKILATASSILLIG 71
Score = 74.4 bits (157), Expect(3) = 4e-075
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +2 / +3
Query: 398 VLADKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCG 526
+ ++K+ YAIV+VGE PYAETFGD+LNLTI PGPS +VCG
Sbjct: 474 IKSNKFSYAIVIVGEKPYAETFGDSLNLTIAEPGPSTITNVCG 602
Score = 56.2 bits (117), Expect(2) = 2e-039
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -3 / -1
Query: 525 PHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYL 409
PHT LGPG+ IVRF+LSPNVSA G SPT T+A* L
Sbjct: 601 PHTLVMVLGPGSAIVRFKLSPNVSA*GFSPTITMA*ENL 485
Score = 53.0 bits (110), Expect(3) = 4e-075
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +2 / +3
Query: 296 SSGNTTAGTTILSGIEATVDPSTQVVYSESPDSGVL 403
S + T GTTIL GI+ TVDP+T+VVY+E+PD+ +
Sbjct: 369 SGSDLTTGTTILDGIKQTVDPATEVVYNENPDANFI 476
>gb|AW687058.1|AW687058 NF005E09RT1F1070 Developing root Medicago truncatula cDNA clone
NF005E09RT 5', mRNA sequence
Length = 653
Score = 193 bits (418), Expect(3) = 3e-072
Identities = 82/102 (80%), Positives = 88/102 (86%)
Frame = +2 / +2
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKF MGLFENP D SLA +LG QEHRELAREAVRKSLVLLKNG++
Sbjct: 68 PMSRIDDAVKRILRVKFVMGLFENPLADYSLADQLGSQEHRELAREAVRKSLVLLKNGEN 247
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGN 307
P+LPLPKKA KILVAGSHA++LG QCGGWTI WQG SGN
Sbjct: 248 VDKPILPLPKKASKILVAGSHADNLGYQCGGWTIQWQGQSGN 373
Score = 127 bits (273), Expect(2) = 1e-040
Identities = 62/97 (63%), Positives = 67/97 (69%)
Frame = -3 / -3
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
CH +VHPPH PR A LPAT IL AF GRGS G PFF T DFLTAS A+S CS
Sbjct: 357 CH*MVHPPH*YPRLSA*LPATSILEAFLGRGSIGLSTFSPFFNSTNDFLTASLANSLCSW 178
Query: 111 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
PS ARL S GFSNRP+ NLT +IL TASSILL+G
Sbjct: 177 LPS*SARL*SANGFSNRPITNLTLKILFTASSILLIG 67
Score = 82.7 bits (175), Expect(3) = 3e-072
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = +2 / +2
Query: 398 VLADKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVV 574
V ++ + YAIV+VGE PYAET GD+LNLTI G +VCG KCVVVLI+GR +V+
Sbjct: 470 VKSNDFSYAIVIVGETPYAETNGDSLNLTISGQGYETINNVCGVVKCVVVLITGRPIVI 646
Score = 60.8 bits (127), Expect(2) = 1e-040
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -3 / -3
Query: 570 TSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T LP + TTTH PHT + P IV+F+LSP VSAYG SPT TIA
Sbjct: 642 TIGLPVINTTTHFTTPHTLFIVSYPCPEIVKFKLSPFVSAYGVSPTITIA 493
Score = 38.0 bits (77), Expect(3) = 3e-072
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2 / +2
Query: 296 SSGNTTAGTTILSGIEATVDPSTQVVYSESP 388
S N T GT ILS I+ VD T+V Y E+P
Sbjct: 365 SGNNITTGTPILSAIKNAVDKETKVFYEENP 457
>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete
sequence
Length = 123655
Score = 130 bits (281), Expect(4) = 4e-065
Identities = 53/66 (80%), Positives = 59/66 (89%)
Frame = +2 / -3
Query: 110 KQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITW 289
+QEH+ELAREAVRKS+VLLKNGKS+ PLLPLPKK KILVAGSHAN+LG QCGGWTI W
Sbjct: 77822 EQEHKELAREAVRKSMVLLKNGKSAEKPLLPLPKKVPKILVAGSHANNLGYQCGGWTIEW 77643
Query: 290 QGSSGN 307
QG +GN
Sbjct: 77642 QGVNGN 77625
Score = 130 bits (279), Expect = 4e-029
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2 / -2
Query: 71 NPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHAN 250
+PY A +Q HRELAR+AVRKS+VLLKNGKS PLLPLPKK KILVAGSHAN
Sbjct: 70821 SPYKCLIYAYLNSEQVHRELARDAVRKSMVLLKNGKSPEKPLLPLPKKVPKILVAGSHAN 70642
Query: 251 DLGNQCGGWTITWQGSSGN 307
+LG+QCGGWTI WQG SGN
Sbjct: 70641 NLGHQCGGWTIEWQGVSGN 70585
Score = 97.7 bits (208), Expect(3) = 9e-034
Identities = 40/60 (66%), Positives = 42/60 (70%)
Frame = -3 / +1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
CH +V PPH PR AWLPAT I F GRG+ G DLPFFRRT DFLTAS ASS CSC
Sbjct: 77641 CHSMVQPPH*YPRLFAWLPATSIFGTFLGRGNKGFSADLPFFRRTMDFLTASLASSLCSC 77820
Score = 95.9 bits (204), Expect(2) = 4e-024
Identities = 39/60 (65%), Positives = 42/60 (70%)
Frame = -3 / +2
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
CH +V PPH PR AWLPAT I F GRG+ G DLPFFRRT DFLTAS ASS C+C
Sbjct: 70601 CHSMVQPPH*CPRLFAWLPATSIFGTFLGRGNKGFSGDLPFFRRTMDFLTASLASSLCTC 70780
Score = 95.9 bits (204), Expect(4) = 4e-065
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +2 / -2
Query: 404 ADKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
++++ YAIVVVGE PYAE GDN+NLTIP PGP + +VCG KCVV++ISGR LV+E
Sbjct: 77151 SNEFCYAIVVVGEHPYAEMHGDNMNLTIPNPGPEIITNVCGAMKCVVIIISGRPLVIE 76978
Score = 63.0 bits (132), Expect(4) = 4e-065
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +2 / -2
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELG 109
PMSRIDDAV RILRVKF MG+FENP+ D SL LG
Sbjct: 78030 PMSRIDDAVRRILRVKFMMGIFENPFADYSLVKYLG 77923
Score = 61.2 bits (128), Expect(3) = 9e-034
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -3 / +2
Query: 576 STTSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA* 418
S T PE+ TTH P T GPG GIV+F LSP +SA G SPTTTIA*
Sbjct: 76979 SITKGRPEIMITTHFIAPQTFVMISGPGFGIVKFILSPCISA*GCSPTTTIA* 77137
Score = 43.0 bits (88), Expect(4) = 4e-065
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2 / -2
Query: 314 AGTTILSGIEATVDPSTQVVYSESPDSGVL 403
+GTTIL+ ++ TVDP T V+Y E+PD L
Sbjct: 77244 SGTTILNAVKNTVDPETTVIYKENPDKEFL 77155
Score = 39.8 bits (81), Expect(3) = 9e-034
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = -3 / +2
Query: 108 PSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
P +L S GFS P++NLTR+IL TASSI L+G
Sbjct: 77924 PRYLTKL*SANGFSKIPIMNLTRKILLTASSIRLIG 78031
Score = 35.7 bits (72), Expect(2) = 4e-024
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -3 / +2
Query: 108 PSSPARLESG*GFSNRPMVNLTRRIL*TASSI 13
P +L S GFS P++NLTR+IL TASSI
Sbjct: 70883 PRYLTKL*SAKGFSKIPIMNLTRKILLTASSI 70978
>gb|BM779905.1|BM779905 EST590481 KV2 Medicago truncatula cDNA clone pKV2-53K12, mRNA
sequence
Length = 754
Score = 186 bits (403), Expect(2) = 3e-058
Identities = 81/134 (60%), Positives = 95/134 (70%)
Frame = +2 / +1
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKF GLFE P D SL +G + HR+LAREAVRKSLVLLKNGK
Sbjct: 130 PMSRIDDAVERILRVKFAAGLFEFPLSDRSLLDIVGCKPHRDLAREAVRKSLVLLKNGKD 309
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPS 361
P LPL K A +ILV G+HA++LG QCGGWT TW G+SG T G+TIL ++A V
Sbjct: 310 ISEPFLPLNKNAKRILVTGTHADNLGFQCGGWTKTWYGASGRITVGSTILDAVKAAVGAE 489
Query: 362 TQVVYSESPDSGVL 403
TQV+Y + P +
Sbjct: 490 TQVIYEKYPSQDTI 531
Score = 98.6 bits (210), Expect(2) = 6e-025
Identities = 55/123 (44%), Positives = 65/123 (52%)
Frame = -3 / -3
Query: 369 TCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNG 190
TCV T A +I P V+V PPH PR A +P TRIL AF G G
Sbjct: 497 TCVSAPTAALTASKIVEPTVILPLAPYQVLVQPPH*NPRLSA*VPVTRILLAFLFNGRKG 318
Query: 189 A*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL*TASSIL 10
+ PFF +T DF TASRA S C P+ ++ S G SNRP N T +I TASSIL
Sbjct: 317 SLISFPFFNKTNDFRTASRARSLCGLQPTISSKDLSLNGNSNRPAANFTLKIRSTASSIL 138
Query: 9 LMG 1
L+G
Sbjct: 137 LIG 129
Score = 61.7 bits (129), Expect(2) = 3e-058
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +2 / +1
Query: 407 DKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+++ +AIV VGE PYAE+ GDN LTIP G + V +V+LISG LV+E
Sbjct: 538 NEFSFAIVAVGEAPYAESLGDNSELTIPFRGTDIISLVADKFPTLVILISG*ALVLE 708
Score = 35.7 bits (72), Expect(2) = 6e-025
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 498 PGAGIVRFRLSPNVSAYGGSPTTTIA 421
P GIV LSPN SA G SPT TIA
Sbjct: 629 PRKGIVSSELSPNDSA*GASPTATIA 552
>gb|BM779899.1|BM779899 EST590475 KV2 Medicago truncatula cDNA clone pKV2-53I24, mRNA
sequence
Length = 685
Score = 186 bits (403), Expect(2) = 3e-054
Identities = 81/134 (60%), Positives = 95/134 (70%)
Frame = +2 / +2
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKF GLFE P D SL +G + HR+LAREAVRKSLVLLKNGK
Sbjct: 164 PMSRIDDAVERILRVKFAAGLFEFPLSDRSLLDIVGCKPHRDLAREAVRKSLVLLKNGKD 343
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPS 361
P LPL K A +ILV G+HA++LG QCGGWT TW G+SG T G+TIL ++A V
Sbjct: 344 ISEPFLPLNKNAKRILVTGTHADNLGFQCGGWTKTWYGASGRITVGSTILDAVKAAVGAE 523
Query: 362 TQVVYSESPDSGVL 403
TQV+Y + P +
Sbjct: 524 TQVIYEKYPSQDTI 565
Score = 98.6 bits (210), Expect(2) = 6e-025
Identities = 55/123 (44%), Positives = 65/123 (52%)
Frame = -3 / -2
Query: 369 TCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNG 190
TCV T A +I P V+V PPH PR A +P TRIL AF G G
Sbjct: 531 TCVSAPTAALTASKIVEPTVILPLAPYQVLVQPPH*NPRLSA*VPVTRILLAFLFNGRKG 352
Query: 189 A*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL*TASSIL 10
+ PFF +T DF TASRA S C P+ ++ S G SNRP N T +I TASSIL
Sbjct: 351 SLISFPFFNKTNDFRTASRARSLCGLQPTISSKDLSLNGNSNRPAANFTLKIRSTASSIL 172
Query: 9 LMG 1
L+G
Sbjct: 171 LIG 163
Score = 48.0 bits (99), Expect(2) = 3e-054
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2 / +2
Query: 407 DKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSV 520
+++ +AIV VGE PYAE+ GDN LTIP G + V
Sbjct: 572 NEFSFAIVAVGEAPYAESLGDNSELTIPFRGTDIISLV 685
Score = 35.7 bits (72), Expect(2) = 6e-025
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 498 PGAGIVRFRLSPNVSAYGGSPTTTIA 421
P GIV LSPN SA G SPT TIA
Sbjct: 663 PRKGIVSSELSPNDSA*GASPTATIA 586
>emb|CT033766.1| Medicago truncatula chromosome 5 clone mth4-42c9, WORKING DRAFT SEQUENCE
Length = 235225
Score = 114 bits (245), Expect(3) = 2e-035
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = +2 / -2
Query: 62 LFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGS 241
LF N + +L Q HR+LAREAVRKSLVLLKNGK P +PL K A +ILVAG+
Sbjct: 117312 LFSNFQLPHLCSNKLF*QIHRDLAREAVRKSLVLLKNGKEPSKPFIPLNKNAKRILVAGT 117133
Query: 242 HANDLGNQCGGWTITWQGSSGNTTAG 319
HAND+G QCGGWT T GSSG T G
Sbjct: 117132 HANDIGYQCGGWTFTKYGSSGQITIG 117055
Score = 113 bits (243), Expect(4) = 9e-042
Identities = 48/69 (69%), Positives = 53/69 (76%)
Frame = +2 / +1
Query: 113 QEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQ 292
Q HR+LAREAVRKSLVLLKNGK P +PL K A +ILVAG+HAND+G QCGGWT T
Sbjct: 149026 QIHRDLAREAVRKSLVLLKNGKEPSKPFIPLNKNAKRILVAGTHANDIGYQCGGWTFTKY 149205
Query: 293 GSSGNTTAG 319
GSSG T G
Sbjct: 149206 GSSGQITIG 149232
Score = 59.9 bits (125), Expect(4) = 9e-042
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +2 / +3
Query: 407 DKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+++ +AIV +GE PYAE GDN L IP G + V +V+LISGR LV+E
Sbjct: 149397 NEFSFAIVAIGEAPYAECGGDNKELVIPFNGAGIVDIVSDKIPTLVILISGRPLVLE 149567
Score = 59.9 bits (125), Expect(3) = 2e-035
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2 / -1
Query: 407 DKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+++ +AIV +GE PYAE GDN L IP G + + +V+LISGR LV+E
Sbjct: 116749 NEFSFAIVAIGEAPYAECGGDNKELVIPFNGAGIVDIIADKIPTLVILISGRPLVLE 116579
Score = 48.5 bits (100), Expect(4) = 9e-042
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +2 / +2
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELG 109
P+SRIDDAV RILRVKF LFE P D SL +G
Sbjct: 147815 PISRIDDAVERILRVKFIAELFEFPLTDRSLLDIVG 147922
Score = 33.9 bits (68), Expect(4) = 9e-042
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2 / +3
Query: 308 TTAGTTILSGIEATVDPSTQVVYSESPDS 394
TT+GTTIL ++ V T+V+Y + P +
Sbjct: 149295 TTSGTTILDAVKEAVGHDTEVIYEKCPST 149381
Score = 33.9 bits (68), Expect(3) = 2e-035
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2 / -1
Query: 308 TTAGTTILSGIEATVDPSTQVVYSESPDS 394
TT+GTTIL ++ V T+V+Y + P +
Sbjct: 116851 TTSGTTILDAVKEAVGHDTEVIYEKCPST 116765
>gb|CG953701.1|CG953701 MBELK15TF mth2 Medicago truncatula genomic clone 80D5, DNA sequence
Length = 912
Score = 116 bits (249), Expect(2) = 8e-039
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = +2 / +2
Query: 113 QEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGW 277
QEHRELAREAVRKSLVLLKNGKSS P+LPLPKKA KILVAGSHA+++GNQCGGW
Sbjct: 746 QEHRELAREAVRKSLVLLKNGKSSDKPILPLPKKAPKILVAGSHADNIGNQCGGW 910
Score = 84.5 bits (179), Expect(2) = 1e-024
Identities = 37/56 (66%), Positives = 38/56 (67%)
Frame = -3 / -1
Query: 279 VHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
VHPPH P AWLPAT I AF GRGS G E LPFF T DFLTAS A+S CSC
Sbjct: 912 VHPPH*FPILSAWLPATSIFGAFLGRGSIGLSELLPFFNSTNDFLTASLANSLCSC 745
Score = 66.2 bits (139), Expect(2) = 8e-039
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +2 / +3
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHR 124
PMSRIDDAV RILRVKF MGLFENP D SLA ++G R
Sbjct: 543 PMSRIDDAVKRILRVKFVMGLFENPLADYSLADQIGSPVSR 665
Score = 48.9 bits (101), Expect(2) = 1e-024
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -3 / -3
Query: 123 RCSCFPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
R + P ARL S GFSNRP+ NLT +IL TASSILL+G
Sbjct: 664 RLTGLPI*SARL*SANGFSNRPITNLTLKILFTASSILLIG 542
>emb|CR315610.1| mte1-4K11RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 591
Score = 129 bits (278), Expect = 6e-029
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = +2 / +1
Query: 110 KQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITW 289
+Q HRELAR+AVRKS+VLLKNGKS PLLPLPKK KILVAGSHAN+LG+QCGGWTI W
Sbjct: 7 EQVHRELARDAVRKSMVLLKNGKSPEKPLLPLPKKVPKILVAGSHANNLGHQCGGWTIEW 186
Query: 290 QGSSGN 307
QG SGN
Sbjct: 187 QGVSGN 204
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.316 0.137 0.438
Matrix: BLOSUM62
Number of Hits to DB: 353,170,185
Number of Sequences: 392609
Number of extensions: 3505732
Number of successful extensions: 25709
Number of sequences better than 1.0e-020: 10
length of database: 147,244,331
effective HSP length: 49
effective length of database: 128,006,490
effective search space used: 18304928070
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)