TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2643604.2.1
(578 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI272105.1|BI272105 NF020G11FL1F1087 Developing flower M... 168 8e-041
gb|AC144723.5| Medicago truncatula clone mth2-7h1, WORKING ... 168 8e-041
gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone m... 158 6e-038
gb|AC170988.4| Medicago truncatula chromosome 7 clone mth2-... 158 6e-038
gb|BI272382.1|BI272382 NF023C12FL1F1097 Developing flower M... 152 4e-036
gb|CA922543.1|CA922543 EST640261 MTUS Medicago truncatula c... 152 4e-036
gb|AC141866.11| Medicago truncatula clone mth2-12p22, compl... 152 4e-036
gb|BI308545.1|BI308545 EST529955 GPOD Medicago truncatula c... 150 2e-035
gb|BQ165763.1|BQ165763 EST611632 KVKC Medicago truncatula c... 143 2e-033
gb|CA923161.1|CA923161 EST640879 MTUS Medicago truncatula c... 135 2e-033
gb|BE202836.1|BE202836 EST402858 KV1 Medicago truncatula cD... 140 2e-032
gb|CA858134.1|CA858134 EST635389 GLSD Medicago truncatula c... 138 5e-032
gb|AC132565.28| Medicago truncatula clone mth2-4a8, complet... 134 1e-030
gb|BG453827.1|BG453827 NF095C03LF1F1019 Developing leaf Med... 128 6e-029
gb|CX519351.1|CX519351 s13dNF45G11VI088_442754 Virus-Infect... 121 1e-026
gb|AW980710.1|AW980710 EST391863 GVN Medicago truncatula cD... 115 8e-025
gb|AL372911.1|AL372911 MtBA54D11R1 MtBA Medicago truncatula... 108 6e-023
gb|BF636059.1|BF636059 NF066F08DT1F1074 Drought Medicago tr... 107 1e-022
gb|AC161106.12| Medicago truncatula clone mth2-168f23, WORK... 79 1e-021
>gb|BI272105.1|BI272105 NF020G11FL1F1087 Developing flower Medicago truncatula cDNA clone
NF020G11FL 5', mRNA sequence
Length = 645
Score = 168 bits (361), Expect = 8e-041
Identities = 69/102 (67%), Positives = 80/102 (78%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPFKGP N++TLSNV+S+ LKFP P VSFHARDLIRGLL+K+PE RLGS +GA
Sbjct: 272 LLYGKTPFKGPSNDDTLSNVVSESLKFPGTPIVSFHARDLIRGLLIKDPENRLGSIKGAA 451
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTPVTTRKKKE 271
EIK+HPFFEGLNWALIR APPE K D + + +KE
Sbjct: 452 EIKQHPFFEGLNWALIRXAAPPELPKFRDFGTSAPSMAAQKE 577
Score = 114 bits (243), Expect = 1e-024
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = +2 / -1
Query: 329 SGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFKP 508
SGGA RI+AQ RPSKKGC IS AP EP+R+SGSF ++PLI+S A KLT G+ GN +
Sbjct: 519 SGGAAXRIRAQLRPSKKGCCFISAAPFIEPNRFSGSFINNPLIKSLA*KLTIGVPGNLRL 340
Query: 509 CEITFESVSSLPGPLNGVLP 568
+ TF++VSS GPL GV P
Sbjct: 339 SDTTFDNVSSFDGPLKGVFP 280
>gb|AC144723.5| Medicago truncatula clone mth2-7h1, WORKING DRAFT SEQUENCE, 18
unordered pieces
Length = 64100
Score = 168 bits (361), Expect = 8e-041
Identities = 69/102 (67%), Positives = 80/102 (78%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPFKGP N++TLSNV+S+ LKFP P VSFHARDLIRGLL+K+PE RLGS +GA
Sbjct: 51092 LLYGKTPFKGPSNDDTLSNVVSESLKFPGTPIVSFHARDLIRGLLIKDPENRLGSIKGAA 51271
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTPVTTRKKKE 271
EIK+HPFFEGLNWALIR APPE K D + + +KE
Sbjct: 51272 EIKQHPFFEGLNWALIRCAAPPELPKFRDFGTSAPSMAAQKE 51397
Score = 118 bits (252), Expect = 8e-026
Identities = 49/80 (61%), Positives = 60/80 (75%)
Frame = +2 / -3
Query: 329 SGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFKP 508
SGGA HRI+AQ RPSKKGC IS AP EP+R+SGSF ++PLI+S A KLT G+ GN +
Sbjct: 51339 SGGAAHRIRAQLRPSKKGCCFISAAPFIEPNRFSGSFINNPLIKSLA*KLTIGVPGNLRL 51160
Query: 509 CEITFESVSSLPGPLNGVLP 568
+ TF++VSS GPL GV P
Sbjct: 51159 SDTTFDNVSSFDGPLKGVFP 51100
>gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-71n23, complete sequence
Length = 125195
Score = 158 bits (340), Expect = 6e-038
Identities = 64/83 (77%), Positives = 71/83 (85%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYG+TPFKG NEETL+NV+ Q L FPD+P VSF A+DLIRGLLVKEPE RLGS +GA
Sbjct: 120644 LLYGRTPFKGSNNEETLANVVLQSLGFPDDPFVSFEAKDLIRGLLVKEPENRLGSQKGAA 120823
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFFEGLNWALIR T PPE
Sbjct: 120824 EIKQHPFFEGLNWALIRCTIPPE 120892
Score = 118 bits (253), Expect = 6e-026
Identities = 54/80 (67%), Positives = 59/80 (73%)
Frame = +2 / -3
Query: 329 SGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFKP 508
SGG V RIKAQ RPSKKGC LIS AP EP R+SGS T++PLIRS A KLT G SGN +
Sbjct: 120891 SGGIVQRIKAQLRPSKKGCCLISAAPFCEPKRFSGSLTNNPLIRSLASKLTNGSSGNPRL 120712
Query: 509 CEITFESVSSLPGPLNGVLP 568
C TF +VSSL PL GVLP
Sbjct: 120711 CNTTFANVSSLLEPLKGVLP 120652
>gb|AC170988.4| Medicago truncatula chromosome 7 clone mth2-53m12, *** SEQUENCING IN
PROGRESS ***
Length = 122501
Score = 158 bits (340), Expect = 6e-038
Identities = 64/83 (77%), Positives = 71/83 (85%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYG+TPFKG NEETL+NV+ Q L FPD+P VSF A+DLIRGLLVKEPE RLGS +GA
Sbjct: 16939 LLYGRTPFKGSNNEETLANVVLQSLGFPDDPFVSFEAKDLIRGLLVKEPENRLGSQKGAA 17118
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFFEGLNWALIR T PPE
Sbjct: 17119 EIKQHPFFEGLNWALIRCTIPPE 17187
Score = 118 bits (253), Expect = 6e-026
Identities = 54/80 (67%), Positives = 59/80 (73%)
Frame = +2 / -1
Query: 329 SGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFKP 508
SGG V RIKAQ RPSKKGC LIS AP EP R+SGS T++PLIRS A KLT G SGN +
Sbjct: 17186 SGGIVQRIKAQLRPSKKGCCLISAAPFCEPKRFSGSLTNNPLIRSLASKLTNGSSGNPRL 17007
Query: 509 CEITFESVSSLPGPLNGVLP 568
C TF +VSSL PL GVLP
Sbjct: 17006 CNTTFANVSSLLEPLKGVLP 16947
>gb|BI272382.1|BI272382 NF023C12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF023C12FL 5', mRNA sequence
Length = 652
Score = 152 bits (327), Expect = 4e-036
Identities = 62/94 (65%), Positives = 72/94 (76%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP+ P VSF ARDLIRGLLVKEP++RL RGAT
Sbjct: 248 LLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGAT 427
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR PPE K ++ P
Sbjct: 428 EIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIP 529
Score = 63.4 bits (132), Expect(2) = 6e-022
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = +2 / -2
Query: 431 GSFTSSPLIRSRAWKLTAGLSGNFKPCEITFESVSSLPGPLNGVLP*SN 577
GSFTS PLIRS A KLT G SGN T SV+ P PLNGVLP +N
Sbjct: 393 GSFTSKPLIRSLAAKLTTGASGNRSG*PTTLNSVARFPDPLNGVLPNNN 247
Score = 61.6 bits (128), Expect(2) = 6e-022
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2 / -2
Query: 296 GVGAVSMFFRVSGGAVHRIKAQFRPSKKGCRLISVAPL 409
G+ + S F +SGG HRIKAQF PSKKGC LISVAPL
Sbjct: 528 GIFSNSTAFGISGGVAHRIKAQFTPSKKGCCLISVAPL 415
>gb|CA922543.1|CA922543 EST640261 MTUS Medicago truncatula cDNA clone MTUS-55A10, mRNA
sequence
Length = 751
Score = 152 bits (327), Expect = 4e-036
Identities = 62/94 (65%), Positives = 72/94 (76%)
Frame = -3 / -1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP+ P VSF ARDLIRGLLVKEP++RL RGAT
Sbjct: 517 LLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGAT 338
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR PPE K ++ P
Sbjct: 337 EIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIP 236
Score = 63.4 bits (132), Expect(2) = 6e-022
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = +2 / +3
Query: 431 GSFTSSPLIRSRAWKLTAGLSGNFKPCEITFESVSSLPGPLNGVLP*SN 577
GSFTS PLIRS A KLT G SGN T SV+ P PLNGVLP +N
Sbjct: 372 GSFTSKPLIRSLAAKLTTGASGNRSG*PTTLNSVARFPDPLNGVLPNNN 518
Score = 61.6 bits (128), Expect(2) = 6e-022
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2 / +3
Query: 296 GVGAVSMFFRVSGGAVHRIKAQFRPSKKGCRLISVAPL 409
G+ + S F +SGG HRIKAQF PSKKGC LISVAPL
Sbjct: 237 GIFSNSTAFGISGGVAHRIKAQFTPSKKGCCLISVAPL 350
>gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete sequence
Length = 126907
Score = 152 bits (327), Expect = 4e-036
Identities = 62/94 (65%), Positives = 72/94 (76%)
Frame = -3 / -3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP+ P VSF ARDLIRGLLVKEP++RL RGAT
Sbjct: 34601 LLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGAT 34422
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR PPE K ++ P
Sbjct: 34421 EIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIP 34320
Score = 63.4 bits (132), Expect(2) = 5e-022
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 431 GSFTSSPLIRSRAWKLTAGLSGNFKPCEITFESVSSLPGPLNGVLP*SN 577
GSFTS PLIRS A KLT G SGN T SV+ P PLNGVLP +N
Sbjct: 34456 GSFTSKPLIRSLAAKLTTGASGNRSG*PTTLNSVARFPDPLNGVLPNNN 34602
Score = 61.6 bits (128), Expect(2) = 5e-022
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2 / +1
Query: 296 GVGAVSMFFRVSGGAVHRIKAQFRPSKKGCRLISVAPL 409
G+ + S F +SGG HRIKAQF PSKKGC LISVAPL
Sbjct: 34321 GIFSNSTAFGISGGVAHRIKAQFTPSKKGCCLISVAPL 34434
>gb|BI308545.1|BI308545 EST529955 GPOD Medicago truncatula cDNA clone pGPOD-7M21 5' end,
mRNA sequence
Length = 766
Score = 150 bits (322), Expect = 2e-035
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPFKG GN TL NV+ Q LKFP++PA S+ +RDLIRGLL KEP+ RLG RGAT
Sbjct: 402 LLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLAKEPQNRLGVKRGAT 581
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
E+K+HPFFEG+NWALIR + PPE
Sbjct: 582 ELKQHPFFEGVNWALIRCSTPPE 650
Score = 109 bits (232), Expect = 5e-023
Identities = 50/91 (54%), Positives = 58/91 (63%)
Frame = +2 / -1
Query: 305 AVSMFFRVSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTA 484
++S+ +SGG +H I AQF PSKKGC L SVAPL P R+ GSF S P IRSR L A
Sbjct: 673 SLSIGLGISGGVLHLINAQFTPSKKGCCLSSVAPLFTPRRFCGSFASKPRIRSRLA*LVA 494
Query: 485 GLSGNFKPCEITFESVSSLPGPLNGVLP*SN 577
G SGN C T SV+ P PL GVLP +N
Sbjct: 493 GDSGNLSCCPTTLNSVARFPDPLKGVLPYNN 401
>gb|BQ165763.1|BQ165763 EST611632 KVKC Medicago truncatula cDNA clone pKVKC-11E5, mRNA
sequence
Length = 668
Score = 143 bits (307), Expect = 2e-033
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = -3 / -2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+G+TPFKG N TL NV+ Q L+FP++P+VSF ARDLIRGLLVKEP++RL RGAT
Sbjct: 499 LLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGAT 320
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFF+ +NWALIR PPE
Sbjct: 319 EIKQHPFFQNINWALIRCATPPE 251
>gb|CA923161.1|CA923161 EST640879 MTUS Medicago truncatula cDNA clone MTUS-63H5, mRNA
sequence
Length = 511
Score = 135 bits (290), Expect(2) = 2e-033
Identities = 54/74 (72%), Positives = 62/74 (83%)
Frame = -3 / -3
Query: 549 GPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFFE 370
G NEETL+NV+ Q L+FPD+P VSF ARDLI+GLLVKEPE RLG+ +GA EIK+HPFFE
Sbjct: 509 GSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFE 330
Query: 369 GLNWALIRWTAPPE 328
GLNWALIR PPE
Sbjct: 329 GLNWALIRCAIPPE 288
Score = 106 bits (227), Expect = 2e-022
Identities = 46/74 (62%), Positives = 52/74 (70%)
Frame = +2 / +1
Query: 329 SGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFKP 508
SGG RIKAQ PSK GC LIS AP P+R+SGS T++PLIRS AWKLT GLSGN +
Sbjct: 289 SGGIAQRIKAQLSPSKNGCCLISAAPFSVPNRFSGSLTNNPLIRSLAWKLTNGLSGNLRF 468
Query: 509 CEITFESVSSLPGP 550
C T +VSSL P
Sbjct: 469 CNTTLANVSSLLEP 510
Score = 27.6 bits (54), Expect(2) = 2e-033
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3 / -3
Query: 294 VTTRKKKEGKCLEFRLNGDDIEFELF* 214
+ + K GK LE G +EFELF*
Sbjct: 245 IAQSQSKGGKYLECTTTGGQVEFELF* 165
>gb|BE202836.1|BE202836 EST402858 KV1 Medicago truncatula cDNA clone pKV1-3M24, mRNA
sequence
Length = 540
Score = 140 bits (300), Expect = 2e-032
Identities = 57/88 (64%), Positives = 66/88 (75%)
Frame = -3 / -3
Query: 558 PFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHP 379
PFKG GN TL NV+ Q L+FP+ P VSF ARDLIRGLLVKEP++RL RGATEIK+HP
Sbjct: 538 PFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHP 359
Query: 378 FFEGLNWALIRWTAPPETLKNIDTAPTP 295
FFEG+NWALIR PPE K ++ P
Sbjct: 358 FFEGVNWALIRCATPPEIPKAVEFEKIP 275
>gb|CA858134.1|CA858134 EST635389 GLSD Medicago truncatula cDNA clone pGLSD-27I3, mRNA
sequence
Length = 500
Score = 138 bits (297), Expect = 5e-032
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+G TPFKG N+ TL NV+ Q L+FP +P+VSF ARDLI GLLVKEP++RL RGAT
Sbjct: 219 LLFGTTPFKGSANQATLFNVVGQPLRFPKSPSVSFAARDLIMGLLVKEPQHRLAYRRGAT 398
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFF+ +NWALIR PPE
Sbjct: 399 EIKQHPFFQNINWALIRCATPPE 467
>gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete sequence
Length = 134155
Score = 134 bits (287), Expect = 1e-030
Identities = 54/89 (60%), Positives = 67/89 (75%)
Frame = -3 / -2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+G TPFKG G + TL NV+ Q L+FPD+P +S A+DLIRGLL+KEP+ R+ RGAT
Sbjct: 34842 LLHGATPFKGAGYKATLFNVVGQPLRFPDSPQISPVAKDLIRGLLIKEPQKRIAYKRGAT 34663
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNID 310
EIK+HPFFEG+NWAL+R PP ID
Sbjct: 34662 EIKQHPFFEGVNWALVRSATPPHIPDAID 34576
>gb|BG453827.1|BG453827 NF095C03LF1F1019 Developing leaf Medicago truncatula cDNA clone
NF095C03LF 5', mRNA sequence
Length = 561
Score = 128 bits (275), Expect = 6e-029
Identities = 53/90 (58%), Positives = 63/90 (70%)
Frame = -3 / +3
Query: 564 KTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKR 385
K + PG E NV+ Q L+FP+ P VSF ARDLIRGLLVKEP++RL RGATEIK+
Sbjct: 39 KLRLRDPGTEPRXFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQ 218
Query: 384 HPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
HPFFEG+NWALIR PPE K ++ P
Sbjct: 219 HPFFEGVNWALIRCATPPEIPKAVEFEKIP 308
>gb|CX519351.1|CX519351 s13dNF45G11VI088_442754 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 602
Score = 121 bits (258), Expect = 1e-026
Identities = 49/68 (72%), Positives = 56/68 (82%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP+ P VSF ARDLIRGLLVKEP++RL RGAT
Sbjct: 397 LLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGAT 576
Query: 396 EIKRHPFF 373
EIK+HPFF
Sbjct: 577 EIKQHPFF 600
>gb|AW980710.1|AW980710 EST391863 GVN Medicago truncatula cDNA clone pGVN-55P21, mRNA
sequence
Length = 651
Score = 115 bits (245), Expect = 8e-025
Identities = 46/82 (56%), Positives = 59/82 (71%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
L YG TPF+G NE TL+N++++ L+FP P V A+DLI LLVK+P RLGS GA+
Sbjct: 172 LFYGVTPFRGLDNELTLANIVARALEFPKEPTVPATAKDLISQLLVKDPSRRLGSIMGAS 351
Query: 396 EIKRHPFFEGLNWALIRWTAPP 331
IK H FF+G+NWAL+R T PP
Sbjct: 352 AIKHHSFFQGVNWALLRCTTPP 417
>gb|AL372911.1|AL372911 MtBA54D11R1 MtBA Medicago truncatula cDNA clone MtBA54D11 T7, mRNA
sequence
Length = 534
Score = 108 bits (231), Expect = 6e-023
Identities = 44/67 (65%), Positives = 51/67 (76%)
Frame = -3 / +1
Query: 495 PDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFFEGLNWALIRWTAPPETLKN 316
P+ P VSF ARDLIRGLLVKEP++RL RGATEIK+HPFFEG+NWALIR PPE K
Sbjct: 1 PEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKA 180
Query: 315 IDTAPTP 295
++ P
Sbjct: 181 VEFEKIP 201
>gb|BF636059.1|BF636059 NF066F08DT1F1074 Drought Medicago truncatula cDNA clone NF066F08DT
5', mRNA sequence
Length = 623
Score = 107 bits (229), Expect = 1e-022
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
+LYG+TPF+G ++T SN++ + L FP + S AR LI LL ++P RLGS+ G+
Sbjct: 48 MLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPASRLGSATGSN 227
Query: 396 EIKRHPFFEGLNWALIRWTAPP 331
EIK+HPFF G+NW LIR +PP
Sbjct: 228 EIKQHPFFRGINWPLIRNMSPP 293
>gb|AC161106.12| Medicago truncatula clone mth2-168f23, WORKING DRAFT SEQUENCE, 2
ordered pieces
Length = 94880
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = -3 / -1
Query: 483 AVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFFEGLNWALIRWTAPPE 328
A+ HARDLI GLL K+P RLGS RG+ ++K+H FF+G+N ALIR PPE
Sbjct: 66671 ALELHARDLISGLLNKDPTQRLGSKRGSADVKQHSFFKGINLALIRMLTPPE 66516
Score = 45.1 bits (92), Expect(2) = 1e-021
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -3 / -1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVS 475
L+YG+TPF P N+ETL N++ + L FP A S
Sbjct: 66773 LVYGRTPFAAPSNKETLRNILKKPLTFPTPTASS 66672
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 500,445,688
Number of Sequences: 392609
Number of extensions: 5943760
Number of successful extensions: 41357
Number of sequences better than 1.0e-020: 25
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 17574611506
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)