TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2623104.2.4
(1628 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone m... 105 4e-058
emb|AJ620946.1| Medicago truncatula PG3 gene for polygalact... 124 3e-053
gb|BQ148150.1|BQ148150 NF062C04FL1F1034 Developing flower M... 159 2e-051
gb|AC146558.16| Medicago truncatula clone mth2-12a23, WORKI... 171 8e-050
gb|AC144656.12| Medicago truncatula clone mth2-27d4, comple... 117 2e-049
gb|AC126012.22| Medicago truncatula clone mth2-27p4, comple... 124 3e-048
gb|AC141110.7| Medicago truncatula clone mth2-17i10, comple... 124 4e-048
gb|AJ848515.1|AJ848515 AJ848515 MtSN4 Medicago truncatula c... 149 1e-039
gb|CX539149.1|CX539149 s13dNF60F08GS063_461558 Germinating ... 138 3e-039
emb|CR297946.1| mte1-15M11FM1 BAC end, cultivar Jemalong A1... 161 2e-038
gb|BG452808.1|BG452808 NF081A01LF1F1001 Developing leaf Med... 104 1e-036
gb|AC122167.8| Medicago truncatula clone mth1-10d10, comple... 58 2e-036
gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone m... 58 7e-036
gb|AC144760.27| Medicago truncatula clone mth2-8p15, comple... 88 1e-034
gb|BF645495.1|BF645495 NF020D02EC1F1025 Elicited cell cultu... 142 2e-033
gb|CX524955.1|CX524955 s13dNF13H06AT060_478544 Aphid-Infect... 144 3e-033
gb|BG588797.1|BG588797 EST490606 MHRP- Medicago truncatula ... 129 4e-033
gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (... 54 2e-031
gb|AC153001.7| Medicago truncatula clone mth2-95k24, comple... 59 2e-030
gb|AC124961.19| Medicago truncatula clone mth2-18l7, comple... 59 3e-030
emb|CT030211.4| M.truncatula DNA sequence from clone MTH2-8... 68 5e-030
gb|AC155892.1| Medicago truncatula chromosome 7 clone mth2-... 59 1e-029
gb|AC124965.18| Medicago truncatula clone mth2-7h21, comple... 68 4e-029
gb|AC166237.5| Medicago truncatula clone mth2-6a22, WORKING... 54 6e-029
gb|AJ388838.1|AJ388838 AJ388838 Medicago truncatula R108 Me... 94 4e-027
gb|AC148969.4| Medicago truncatula chromosome 2 clone mth2-... 58 7e-027
gb|CB892670.1|CB892670 EST645462 HOGA Medicago truncatula c... 72 7e-027
gb|AC144805.7| Medicago truncatula clone mth2-72a11, comple... 62 7e-026
gb|BI311148.1|BI311148 EST5312898 GESD Medicago truncatula ... 98 2e-025
gb|AC157892.2| Medicago truncatula chromosome 7 clone mte1-... 55 1e-024
gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone m... 56 8e-024
gb|CA989936.1|CA989936 EST643444 GESD Medicago truncatula c... 113 9e-024
gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone m... 57 2e-023
gb|CG919844.1|CG919844 MBEGX10TF mth2 Medicago truncatula g... 109 2e-022
gb|CG932911.1|CG932911 MBEAS01TR mth2 Medicago truncatula g... 109 2e-022
gb|CG946149.1|CG946149 MBENN54TR mth2 Medicago truncatula g... 109 2e-022
gb|CG963606.1|CG963606 MBEID55TF mth2 Medicago truncatula g... 109 2e-022
gb|DW016712.1|DW016712 EST1225673 MTY Medicago truncatula c... 95 8e-022
gb|DW015100.1|DW015100 EST1224061 MTY Medicago truncatula c... 39 3e-021
gb|AC136840.24| Medicago truncatula clone mth2-33n3, comple... 59 4e-021
>gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-85c24, complete
sequence
Length = 132817
Score = 105 bits (223), Expect(5) = 4e-058
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +2 / +1
Query: 698 ITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCT 877
I IT++ I GDDCISIG G+ ++ I VTCGPGHGIS+GSLG+Y +E+ + I V++CT
Sbjct: 15571 INITSSYISTGDDCISIGDGSKQITILNVTCGPGHGISVGSLGKYSNEEPLEYITVRNCT 15750
Query: 878 LKKTMFGVRIKAY 916
L+ T G+RIK +
Sbjct: 15751 LRNTDNGLRIKTW 15789
Score = 97.3 bits (206), Expect(5) = 4e-058
Identities = 39/102 (38%), Positives = 51/102 (50%)
Frame = +2 / +3
Query: 209 AVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDH 388
A+ W AC T ILIPKG + + Q+N GPC + IQVDG + A DL+Q
Sbjct: 14877 ALIATWKEACASTSSSKILIPKGTYKLKQVNLRGPCNAPIEIQVDGTIEAPADLTQLDGK 15056
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKIL 514
WI D ++G G DG G W +N C K +C +L
Sbjct: 15057 YQWIIFGYFDFFTLSGVGTFDGLGEVAWKQNGCGKNKNCNML 15182
Score = 57.4 bits (119), Expect(5) = 4e-058
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2 / +3
Query: 536 FVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNT 667
F+NN + G+T +SK+FH+N++ CK++ D + TAP SPN+
Sbjct: 15411 FLNNSIIKGITSKDSKYFHVNVFGCKNLTFMDFSATAPATSPNS 15542
Score = 50.6 bits (104), Expect(5) = 4e-058
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +2 / +2
Query: 1049 KVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVN 1171
K+ + VTFK+ITGTS+T V L+C++ VPC V + +++
Sbjct: 16049 KIKISKVTFKDITGTSATQNGVVLICSSGVPCEEVVLSNID 16171
Score = 30.4 bits (60), Expect(5) = 4e-058
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 941 VSKIHYENIKMEDSANPIFI 1000
VS +H+ENI M++ +NP+ I
Sbjct: 15817 VSNLHFENIIMDNVSNPVII 15876
>emb|AJ620946.1| Medicago truncatula PG3 gene for polygalacturonase precursor, exons
1-4
Length = 2050
Score = 124 bits (266), Expect(4) = 3e-053
Identities = 46/112 (41%), Positives = 70/112 (62%)
Frame = +2 / +2
Query: 698 ITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCT 877
+ + NT I GDDCIS+G G+ ++ + V CGPGHGIS+GSLG+ E+ + VK+CT
Sbjct: 1415 VKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVKNCT 1594
Query: 878 LKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCT 1033
+ T GVRIK + + ++ +H+E+ M + NP+ ID +YCP C+
Sbjct: 1595 ISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQCS 1750
Score = 57.9 bits (120), Expect(4) = 3e-053
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2 / +2
Query: 209 AVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKD 385
A AW +ACG T ++IP+G + + ++ GPCK + +QVDG + A+ + + D
Sbjct: 548 AFTNAWKAACGSTTASKVIIPRGIYKIHAVDVKGPCKAPIEVQVDGTIQASQNPDELND 724
Score = 51.9 bits (107), Expect(4) = 3e-053
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2 / +2
Query: 533 DFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSS 694
+F+ V + +SK FH+N+ C + +T+TAP S NTDGIH+G S+
Sbjct: 1247 NFLKLSIVQDIISKDSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRST 1408
Score = 45.5 bits (93), Expect(4) = 3e-053
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCK 508
W++ VD ++GKG DG G W++N C K CK
Sbjct: 737 WVKFGYVDYFTLSGKGVFDGNGETAWTQNDCGKNSTCK 850
>gb|BQ148150.1|BQ148150 NF062C04FL1F1034 Developing flower Medicago truncatula cDNA clone
NF062C04FL 5', mRNA sequence
Length = 669
Score = 159 bits (341), Expect(4) = 2e-051
Identities = 61/117 (52%), Positives = 84/117 (71%)
Frame = +2 / +2
Query: 494 KYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDG 673
K +C LP+SL D + N V VT LNS FH +++ C ++ ++ +TAPG+SPNTDG
Sbjct: 251 KGNCASLPSSLKFDKIKNAIVQDVTSLNSMQFHFHLHGCSNISFTNLHITAPGNSPNTDG 430
Query: 674 IHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEK 844
+H+ S IT+TN+VI GDDCIS+G TS + I+G+TCGPGHGIS+GSLG+ +EK
Sbjct: 431 MHISSSDFITVTNSVIATGDDCISVGHSTSNITISGITCGPGHGISVGSLGKRPEEK 601
Score = 39.1 bits (79), Expect(4) = 2e-051
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSC 487
W + +D LV+ G G DGQG W N C
Sbjct: 149 WFQFENIDGLVLKGSGVFDGQGSISWPLNDC 241
Score = 36.3 bits (73), Expect(4) = 2e-051
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2 / +2
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVD 343
T+LIP G F+ GQ F GPC I V+
Sbjct: 8 TVLIPAGTFVTGQTLFAGPCTSPKPITVE 94
Score = 27.2 bits (53), Expect(4) = 2e-051
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2 / +2
Query: 326 VTIQVDGNLLATTDLSQY 379
+T+++ G ATTDLS+Y
Sbjct: 83 ITVEIVGKAQATTDLSEY 136
>gb|AC146558.16| Medicago truncatula clone mth2-12a23, WORKING DRAFT SEQUENCE, 4 ordered
pieces
Length = 126642
Score = 171 bits (368), Expect(3) = 8e-050
Identities = 70/142 (49%), Positives = 94/142 (66%)
Frame = +2 / -1
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
S+ D++ NG + + NSK H +YRC +M + + + APGDSPNTDGI +G S+GI
Sbjct: 67230 SMKFDYITNGYIHHMHSFNSKQSHFGLYRCNNMTLTKLQIKAPGDSPNTDGIKIGKSTGI 67051
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
IT+ I G+DCIS+ G V I V CGPGHGI+IGSLG+Y+DE+D+ DI VK+CT
Sbjct: 67050 NITSVNIRTGNDCISMLSGLKNVQIMDVYCGPGHGINIGSLGKYEDEEDLADIIVKNCTF 66871
Query: 881 KKTMFGVRIKAYEDAASVLTVS 946
T GVRIK+YE + V+
Sbjct: 66870 NGTSNGVRIKSYESQLNKTVVA 66805
Score = 115 bits (246), Expect = 2e-024
Identities = 56/106 (52%), Positives = 68/106 (64%)
Frame = -3 / +2
Query: 918 SYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEM 739
SY L+ TP +V L VQ LT+MS S SS Y PRLPM +P PGPQ T ++ T P +EM
Sbjct: 66833 SYDLILTPLLVPLNVQFLTIMSARSSSSSYLPRLPMFIP*PGPQYTSII*TFFKPESIEM 67012
Query: 738 QSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRY 601
QS P M LV+ IP + P+ MPSVLGLSPGA + + M LH Y
Sbjct: 67013 QSLPVLMLTLVIFIPVDFPILMPSVLGLSPGAFICSFVSVMLLHLY 67150
Score = 50.1 bits (103), Expect(3) = 8e-050
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2 / -1
Query: 392 NWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
NWI V+ L++ G G+LD QG W N C K +C+ LP
Sbjct: 68154 NWINFKYVNKLMVGGGGSLDAQGAYAWKMNDCQKNPNCRPLP 68029
Score = 37.7 bits (76), Expect(3) = 8e-050
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2 / -3
Query: 206 KAVQEAWASACGGTGKQTILIPKGDFLVGQL 298
KA +AW+ AC GK TILIP G + + L
Sbjct: 68488 KAFLKAWSDACKWKGKSTILIPNGTYTLRSL 68396
>gb|AC144656.12| Medicago truncatula clone mth2-27d4, complete sequence
Length = 102057
Score = 117 bits (250), Expect(4) = 2e-049
Identities = 49/96 (51%), Positives = 67/96 (69%)
Frame = +2 / +1
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
S+ + N VSG+T LNSK H+ + CK+++IKDV + AP SPNTDGI++ S+G+
Sbjct: 69076 SISFSWSKNVLVSGLTSLNSKAIHIAVDHCKNVVIKDVKIRAPSRSPNTDGINVQFSTGV 69255
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGI 808
TI+++ I GDDCISI GT+ V I + CGPGHGI
Sbjct: 69256 TISHSTIMTGDDCISINQGTTHVWIDRIACGPGHGI 69363
Score = 82.2 bits (173), Expect(4) = 2e-049
Identities = 32/95 (33%), Positives = 52/95 (54%)
Frame = +2 / +2
Query: 152 SFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVT 331
S ++ GA +G DSTK AW+ AC TI +P+G FL+ Q++F GPC +
Sbjct: 68012 SINVASFGAKSDGTQDSTKPFLSAWSLACKSNEASTIYVPQGSFLLKQVSFWGPCLNKID 68191
Query: 332 IQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
++DG ++A + + G WI ++V+ + I G
Sbjct: 68192 FKIDGTIVAPSKYESLGNSGYWILFMKVNWVSIYG 68296
Score = 46.4 bits (95), Expect(4) = 2e-049
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2 / +3
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEY 1180
S V + V++++I GTS++P A+ C+ PC G+ + D+N+ Y
Sbjct: 70908 SGVKISSVSYQHIKGTSASPVAIKFDCSQSNPCLGLKLQDINLIY 71042
Score = 37.7 bits (76), Expect(4) = 2e-049
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2 / +3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
SIGSLG +E V ++ V D KT GVRIK++
Sbjct: 69936 SIGSLGSDSNEAGVENVTVTDSVFTKTQNGVRIKSW 70043
>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence
Length = 108900
Score = 124 bits (266), Expect(4) = 3e-048
Identities = 46/112 (41%), Positives = 70/112 (62%)
Frame = +2 / -3
Query: 698 ITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCT 877
+ + NT I GDDCIS+G G+ ++ + V CGPGHGIS+GSLG+ E+ + VK+CT
Sbjct: 40270 VKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVKNCT 40091
Query: 878 LKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCT 1033
+ T GVRIK + + ++ +H+E+ M + NP+ ID +YCP C+
Sbjct: 40090 ISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQCS 39935
Score = 57.9 bits (120), Expect(4) = 3e-048
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2 / -3
Query: 209 AVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKD 385
A AW +ACG T ++IP+G + + ++ GPCK + +QVDG + A+ + + D
Sbjct: 41137 AFTNAWKAACGSTTASKVIIPRGIYKIHAVDVKGPCKAPIEVQVDGTIQASQNPDELND 40961
Score = 51.9 bits (107), Expect(4) = 3e-048
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2 / -3
Query: 533 DFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSS 694
+F+ V + +SK FH+N+ C + +T+TAP S NTDGIH+G S+
Sbjct: 40438 NFLKLSIVQDIISKDSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRST 40277
Score = 45.5 bits (93), Expect(4) = 3e-048
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCK 508
W++ VD ++GKG DG G W++N C K CK
Sbjct: 40948 WVKFGYVDYFTLSGKGVFDGNGETAWTQNDCGKNSTCK 40835
>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence
Length = 113345
Score = 124 bits (266), Expect(4) = 4e-048
Identities = 46/112 (41%), Positives = 70/112 (62%)
Frame = +2 / -1
Query: 698 ITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCT 877
+ + NT I GDDCIS+G G+ ++ + V CGPGHGIS+GSLG+ E+ + VK+CT
Sbjct: 95492 VKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVKNCT 95313
Query: 878 LKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCT 1033
+ T GVRIK + + ++ +H+E+ M + NP+ ID +YCP C+
Sbjct: 95312 ISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQCS 95157
Score = 57.9 bits (120), Expect(4) = 4e-048
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2 / -1
Query: 209 AVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKD 385
A AW +ACG T ++IP+G + + ++ GPCK + +QVDG + A+ + + D
Sbjct: 96359 AFTNAWKAACGSTTASKVIIPRGIYKIHAVDVKGPCKAPIEVQVDGTIQASQNPDELND 96183
Score = 51.9 bits (107), Expect(4) = 4e-048
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2 / -1
Query: 533 DFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSS 694
+F+ V + +SK FH+N+ C + +T+TAP S NTDGIH+G S+
Sbjct: 95660 NFLKLSIVQDIISKDSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRST 95499
Score = 45.5 bits (93), Expect(4) = 4e-048
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCK 508
W++ VD ++GKG DG G W++N C K CK
Sbjct: 96170 WVKFGYVDYFTLSGKGVFDGNGETAWTQNDCGKNSTCK 96057
>gb|AJ848515.1|AJ848515 AJ848515 MtSN4 Medicago truncatula cDNA clone MtN408H03N1, mRNA
sequence
Length = 677
Score = 149 bits (320), Expect(2) = 1e-039
Identities = 59/138 (42%), Positives = 90/138 (65%)
Frame = +2 / -1
Query: 506 KILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMG 685
K P +L + VSG+T+ NS+ H+ C ++ + D+T ++PGDSPNTDGIH+
Sbjct: 563 KTKPTALRFYGSDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQ 384
Query: 686 DSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINV 865
+S + I+ + + GDDC+SI G S + + V CGPGHGISIGSLG+ + V+++ V
Sbjct: 383 NSQDVVISGSTLSCGDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKENTKACVSNVTV 204
Query: 866 KDCTLKKTMFGVRIKAYE 919
+D TL+ T+ GVRIK ++
Sbjct: 203 RDVTLQNTLTGVRIKTWQ 150
Score = 36.3 bits (73), Expect(2) = 1e-039
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2 / -1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWS 475
W+E +++ + I GKG +DGQG W+
Sbjct: 662 WLEFTKLNKITIKGKGVIDGQGSVWWN 582
>gb|CX539149.1|CX539149 s13dNF60F08GS063_461558 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 614
Score = 138 bits (295), Expect(3) = 3e-039
Identities = 58/137 (42%), Positives = 85/137 (62%)
Frame = +2 / +3
Query: 503 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHM 682
C P SL V N + G+ +N K FH+ + +C ++ ++ + +TAP SPNTDGIH+
Sbjct: 204 CVPNPPSLYFTKVQNAIIMGIKSVNPKGFHVFVTQCSNIRLQRLRLTAPDTSPNTDGIHI 383
Query: 683 GDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDIN 862
S G+ I IG GDDC+ + G+ ++ I + CGPGHGISIGSLGR DE++V +
Sbjct: 384 STSYGVKINRCTIGTGDDCVGMIDGSEQIAINKLECGPGHGISIGSLGRRADEREVKGVR 563
Query: 863 VKDCTLKKTMFGVRIKA 913
V++ L T G+RIK+
Sbjct: 564 VQNSELIGTDNGLRIKS 614
Score = 33.1 bits (66), Expect(3) = 3e-039
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 326 VTIQVDGNLLATTDLSQY 379
VTIQV G +LATTD+S+Y
Sbjct: 18 VTIQVVGTILATTDISEY 71
Score = 31.8 bits (63), Expect(3) = 3e-039
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / +3
Query: 386 HGNWIEILRVDNLVITGKGNLDGQGPAVW 472
+G W E ++ L + G G DGQG W
Sbjct: 75 NGRWFEFQDLNGLKMLGGGTFDGQGQESW 161
>emb|CR297946.1| mte1-15M11FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 708
Score = 161 bits (347), Expect = 2e-038
Identities = 66/133 (49%), Positives = 93/133 (69%)
Frame = +2 / +3
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
++ DF+ NG V + ++SK H ++ C++ML++ + +TAP DSPNTDGI +G S GI
Sbjct: 165 TMKFDFITNGYVHDMHSIDSKQSHFVLFGCENMLLRGLKITAPKDSPNTDGIKIGMSKGI 344
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
I++ IG GDDCI++ GT V I+ V CGPGHGIS+GSLG + E+D+ DI VK+CT
Sbjct: 345 NISSVNIGTGDDCIAMLSGTRNVRISDVFCGPGHGISVGSLGGNEGEEDIDDIVVKNCTF 524
Query: 881 KKTMFGVRIKAYE 919
T GVRIK++E
Sbjct: 525 NGTSNGVRIKSWE 563
>gb|BG452808.1|BG452808 NF081A01LF1F1001 Developing leaf Medicago truncatula cDNA clone
NF081A01LF 5', mRNA sequence
Length = 583
Score = 104 bits (221), Expect(2) = 1e-036
Identities = 43/92 (46%), Positives = 59/92 (64%)
Frame = +2 / +2
Query: 653 DSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRY 832
DSPNTDGIH+ +S+ + + + IG GDDCISI +S + + + CGPGHGISIGSLG+
Sbjct: 2 DSPNTDGIHISESTNVIVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKD 181
Query: 833 KDEKDVTDINVKDCTLKKTMFGVRIKAYEDAA 928
VT + + LK T G+RIK ++ A
Sbjct: 182 NSTGVVTKVILDTAFLKGTTNGLRIKTWQGGA 277
Score = 72.1 bits (151), Expect(2) = 1e-036
Identities = 22/79 (27%), Positives = 52/79 (65%)
Frame = +2 / +2
Query: 941 VSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSL 1120
V + ++N+++E+ +NPI ID YC + N +S + + ++ ++N++GT+++ +A+
Sbjct: 284 VKGVRFQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISEIMYQNVSGTTNSAKAIKF 463
Query: 1121 LCTAKVPCTGVTMDDVNVE 1177
C+ VPC+ + + +V++E
Sbjct: 464 DCSDTVPCSNLVLSNVDLE 520
>gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete sequence
Length = 93126
Score = 57.9 bits (120), Expect(7) = 2e-036
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +2 / -1
Query: 551 EVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVG 730
++ G T +N H+ + CK +I ++ + APG+SPNTDGI + S I + N+ I G
Sbjct: 27339 QIKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATG 27160
Query: 731 D 733
+
Sbjct: 27159 N 27157
Score = 55.6 bits (115), Expect(7) = 2e-036
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2 / -1
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGISI 814
VGDDCI+I G+S + IT +TCGPGHGI +
Sbjct: 27093 VGDDCIAISAGSSVIKITAITCGPGHGIRL 27004
Score = 53.3 bits (110), Expect(7) = 2e-036
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +2 / -1
Query: 1052 VTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGS 1231
+ V DVT++ I+GTS T +A++L C V C+ + D V V + K + C NA G
Sbjct: 26451 IKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRVYVRSAVPKMKVFSFCHNAHGR 26272
Query: 1232 TKGCLKELAC 1261
L C
Sbjct: 26271 ASHTKPILNC 26242
Score = 46.0 bits (94), Expect(7) = 2e-036
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2 / -1
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIK 910
SIGSLG D V D++VK+CTL +T+ GVRIK
Sbjct: 26913 SIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIK 26812
Score = 36.3 bits (73), Expect(7) = 2e-036
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2 / -1
Query: 947 KIHYENIKMEDSANPIFIDMKYCPNKLCTAN 1039
+I +ENIK + NPI+ID YC N++ N
Sbjct: 26640 RITFENIKFVRAHNPIWIDQFYCVNQMVCRN 26548
Score = 34.5 bits (69), Expect(7) = 2e-036
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2 / -3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSK 478
WI V+ L+I+GKG +DG+G W +
Sbjct: 27733 WIGFSFVNGLIISGKGTVDGRGSMWWKQ 27650
Score = 28.1 bits (55), Expect(7) = 2e-036
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / -1
Query: 127 CESVRAWWVLRHHQVGRLRQWQD 195
C S W +LR H + R+ W D
Sbjct: 53427 CASALCWILLREHHLCRILNWPD 53359
>gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-49n15, complete
sequence
Length = 113539
Score = 57.9 bits (120), Expect(7) = 7e-036
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +2 / -3
Query: 551 EVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVG 730
++ G T +N H+ + CK +I ++ + APG+SPNTDGI + S I + N+ I G
Sbjct: 60626 QIKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATG 60447
Query: 731 D 733
+
Sbjct: 60446 N 60444
Score = 55.6 bits (115), Expect(7) = 7e-036
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2 / -3
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGISI 814
VGDDCI+I G+S + IT +TCGPGHGI +
Sbjct: 60380 VGDDCIAISAGSSVIKITAITCGPGHGIRL 60291
Score = 53.3 bits (110), Expect(7) = 7e-036
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +2 / -3
Query: 1052 VTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGS 1231
+ V DVT++ I+GTS T +A++L C V C+ + D V V + K + C NA G
Sbjct: 59738 IKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRVYVRSAVPKMKVFSFCHNAHGR 59559
Query: 1232 TKGCLKELAC 1261
L C
Sbjct: 59558 ASHTKPILNC 59529
Score = 46.0 bits (94), Expect(7) = 7e-036
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2 / -3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIK 910
SIGSLG D V D++VK+CTL +T+ GVRIK
Sbjct: 60200 SIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIK 60099
Score = 36.3 bits (73), Expect(7) = 7e-036
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2 / -3
Query: 947 KIHYENIKMEDSANPIFIDMKYCPNKLCTAN 1039
+I +ENIK + NPI+ID YC N++ N
Sbjct: 59927 RITFENIKFVRAHNPIWIDQFYCVNQMVCRN 59835
Score = 34.5 bits (69), Expect(7) = 7e-036
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2 / -2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSK 478
WI V+ L+I+GKG +DG+G W +
Sbjct: 61020 WIGFSFVNGLIISGKGTVDGRGSMWWKQ 60937
Score = 28.1 bits (55), Expect(7) = 7e-036
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / -3
Query: 127 CESVRAWWVLRHHQVGRLRQWQD 195
C S W +LR H + R+ W D
Sbjct: 86714 CASALCWILLREHHLCRILNWPD 86646
>gb|AC144760.27| Medicago truncatula clone mth2-8p15, complete sequence
Length = 108569
Score = 88.1 bits (186), Expect(5) = 1e-034
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = +2 / -2
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVR 904
VGDDC+SI G S + + V CGPGHGISIGSLG+ + V+++ V+D TL+ T+ GVR
Sbjct: 33763 VGDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKENTKACVSNVTVRDVTLQNTLTGVR 33584
Query: 905 IKAYE 919
IK ++
Sbjct: 33583 IKTWQ 33569
Score = 68.4 bits (143), Expect(5) = 1e-034
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +2 / -1
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVG 730
VSG+T+ NS+ H+ C ++ + D+T ++PGDSPNTDGIH+ +S + I+ + + G
Sbjct: 34019 VSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVISGSTLSCG 33843
Score = 36.3 bits (73), Expect(5) = 1e-034
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2 / -3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWS 475
W+E +++ + I GKG +DGQG W+
Sbjct: 34650 WLEFTKLNKITIKGKGVIDGQGSVWWN 34570
Score = 34.5 bits (69), Expect(5) = 1e-034
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 1100 TPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNN 1195
T E + C+ +PC G+T+D + +E S +N
Sbjct: 32862 TKEPIYFACSDSLPCKGITLDTIKLESSQNSN 32767
Score = 31.3 bits (62), Expect(5) = 1e-034
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2 / -2
Query: 206 KAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
+A ++AWA+AC ++ FLV ++F+GP
Sbjct: 35545 QAFEDAWAAACKMEASTMVVPSGSVFLVKPISFSGP 35438
>gb|BF645495.1|BF645495 NF020D02EC1F1025 Elicited cell culture Medicago truncatula cDNA
clone NF020D02EC 5', mRNA sequence
Length = 680
Score = 142 bits (304), Expect(2) = 2e-033
Identities = 58/121 (47%), Positives = 78/121 (64%)
Frame = +2 / +3
Query: 545 NGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIG 724
N V+G+T+ NS H+ C +L+ DVT+++PGDSPNTDGIH+ +S + I + +
Sbjct: 318 NPTVTGITIQNSPQCHLKFDNCNGVLVHDVTISSPGDSPNTDGIHLQNSRDVLIYKSTMA 497
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVR 904
GDDCISI G S V + V CGPGHGISIG LG+ V++I V+D + TM GVR
Sbjct: 498 CGDDCISIQTGCSNVYVHNVDCGPGHGISIGGLGKDNTRACVSNITVRDVNMHNTMNGVR 677
Query: 905 I 907
I
Sbjct: 678 I 680
Score = 26.7 bits (52), Expect(2) = 2e-033
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2 / +3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVW 472
W++ ++ I G G DG+G W
Sbjct: 84 WLDFTKLVGFTIQGNGIFDGRGSVWW 161
>gb|CX524955.1|CX524955 s13dNF13H06AT060_478544 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 542
Score = 144 bits (310), Expect = 3e-033
Identities = 62/146 (42%), Positives = 89/146 (60%)
Frame = +2 / +1
Query: 491 KKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTD 670
K CK P +L +D ++ +V G+T+ NS+ H + RC + I V V +PGDSPNTD
Sbjct: 55 KTNPCKGAPTALTIDTSSSIKVKGLTIQNSQQMHFTISRCDSVRILGVKVASPGDSPNTD 234
Query: 671 GIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDV 850
GIH+ +S+ + + + IG GDDCISI +S + + + CGPGHGISIGSLG+ V
Sbjct: 235 GIHISESTNVIVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTGVV 414
Query: 851 TDINVKDCTLKKTMFGVRIKAYEDAA 928
T + + LK T G+RIK ++ A
Sbjct: 415 TKVILDTAFLKGTTNGLRIKTWQGGA 492
>gb|BG588797.1|BG588797 EST490606 MHRP- Medicago truncatula cDNA clone pMHRP-57F15, mRNA
sequence
Length = 631
Score = 129 bits (276), Expect(3) = 4e-033
Identities = 55/122 (45%), Positives = 75/122 (61%)
Frame = +2 / +2
Query: 551 EVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVG 730
+V + +S+ H+ RC ++ + ++ V AP DSPNTDGIH+ ++ I I N IG G
Sbjct: 5 KVKNLRFKDSQQMHVVFERCFNVFVSNLIVRAPEDSPNTDGIHVAETQNIDIINCDIGTG 184
Query: 731 DDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIK 910
DDCISI G+ V +TCGPGHGISIGSLG E +V+++ V L T GVRIK
Sbjct: 185 DDCISIVSGSKNVRAIDITCGPGHGISIGSLGADNSEAEVSNVVVNRAALTGTTNGVRIK 364
Query: 911 AY 916
+
Sbjct: 365 TW 370
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2 / +1
Query: 1010 YCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAK 1135
YC V + V ++NI GTS++ A+ C+ K
Sbjct: 460 YCDQTEPCQERNKAVQLSQVLYQNIRGTSASEIAIKFNCSRK 585
Score = 26.3 bits (51), Expect(3) = 4e-033
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2 / +3
Query: 950 IHYENIKMEDSANPIFID 1003
I + NIKM++ NP+ ID
Sbjct: 399 IKFMNIKMQNVTNPVIID 452
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds
Length = 68460
Score = 53.8 bits (111), Expect(7) = 2e-031
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +2 / +2
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVG 730
+S + +NS H+++ CK+ I ++ +TAP SPNTDGI + S+ I I N+ I G
Sbjct: 49739 LSNLNHMNSPKNHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETG 49915
Score = 53.3 bits (110), Expect(7) = 2e-031
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / +2
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGISI 814
VGDDCI+I G+S + ITG CGPGHGI +
Sbjct: 50198 VGDDCIAINNGSSVITITGTFCGPGHGIRL 50287
Score = 46.9 bits (96), Expect(7) = 2e-031
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2 / +1
Query: 1037 NGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNV 1174
N S V + DVT+ NI GTS A+ L C + C + +D +N+
Sbjct: 50761 NADSAVEISDVTYSNIRGTSVGEYAIELKCELNIGCNNIVLDHINI 50898
Score = 42.3 bits (86), Expect(7) = 2e-031
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSK 478
WI+ ++ LV+ G+GN+DGQG W K
Sbjct: 49490 WIQFSKISGLVVNGEGNIDGQGSPWWDK 49573
Score = 38.2 bits (77), Expect(7) = 2e-031
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2 / +1
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
S+GSLG+ V D+ V++CT T G RIK +E
Sbjct: 50386 SVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIKTFE 50496
Score = 29.9 bits (59), Expect(7) = 2e-031
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 950 IHYENIKMEDSANPIFIDMKYCPN 1021
I YE+I + + NP+ ID Y PN
Sbjct: 50692 ITYEDIILNEVKNPVIIDQAYNPN 50763
Score = 27.2 bits (53), Expect(7) = 2e-031
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 146 GGSFDITKLGASGNGKTDST 205
G +FD+ GA G+G+TD +
Sbjct: 48331 GSTFDVLTYGAIGDGQTDDS 48390
>gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete sequence
Length = 100724
Score = 59.3 bits (123), Expect(8) = 2e-030
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2 / -1
Query: 542 NNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVI 721
+N V G+ + NS FH C+ + ++ + +TAP SPNTDGIH+ +++ + I N+V+
Sbjct: 91895 SNLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVV 91716
Query: 722 GVG 730
G
Sbjct: 91715 SNG 91707
Score = 53.3 bits (110), Expect(8) = 2e-030
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2 / -2
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGI 808
+GDDC+SIG G V+I +TCGPGHGI
Sbjct: 91615 IGDDCVSIGSGCYDVDIKNITCGPGHGI 91532
Score = 38.6 bits (78), Expect(8) = 2e-030
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / -1
Query: 149 GSFDITKLGASGNGKTDSTKAVQEAWASAC 238
G D+ K GA G+G TD T++ + AW +AC
Sbjct: 93161 GLLDVRKFGAIGDGITDDTESFKMAWDTAC 93072
Score = 35.9 bits (72), Expect(8) = 2e-030
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2 / -3
Query: 938 TVSKIHYENIKMEDSANPIFIDMKYCPNKLCT 1033
+VS + + NI M+ NPI ID YC +K C+
Sbjct: 91092 SVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCS 90997
Score = 35.9 bits (72), Expect(8) = 2e-030
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2 / -3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG + V++I V+D ++ + GVRIK ++
Sbjct: 91215 SIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTWQ 91105
Score = 30.9 bits (61), Expect(8) = 2e-030
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTK 1237
C+ +PCT +T+ D+ + S + C NA G+++
Sbjct: 90906 CSDSIPCTNLTLSDIELLPSQGDMLNDPFCWNAYGNSE 90793
Score = 30.4 bits (60), Expect(8) = 2e-030
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2 / -1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVW 472
W+ RV+ + + G G +DG+G W
Sbjct: 92255 WLVFYRVNGMSLEGSGTIDGRGQKWW 92178
Score = 29.9 bits (59), Expect(8) = 2e-030
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / -1
Query: 269 PKGDFLVGQLNFTGPCKGDVTIQV 340
P F+V FTGPCKG + ++V
Sbjct: 93035 PGFSFIVQSTIFTGPCKGGLVLKV 92964
>gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete sequence
Length = 106560
Score = 59.3 bits (123), Expect(8) = 3e-030
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2 / +2
Query: 542 NNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVI 721
+N V G+ + NS FH C+ + ++ + +TAP SPNTDGIH+ +++ + I N+V+
Sbjct: 10580 SNLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVV 10759
Query: 722 GVG 730
G
Sbjct: 10760 SNG 10768
Score = 53.3 bits (110), Expect(8) = 3e-030
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2 / +3
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGI 808
+GDDC+SIG G V+I +TCGPGHGI
Sbjct: 10860 IGDDCVSIGSGCYDVDIKNITCGPGHGI 10943
Score = 38.6 bits (78), Expect(8) = 3e-030
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 149 GSFDITKLGASGNGKTDSTKAVQEAWASAC 238
G D+ K GA G+G TD T++ + AW +AC
Sbjct: 9314 GLLDVRKFGAIGDGITDDTESFKMAWDTAC 9403
Score = 35.9 bits (72), Expect(8) = 3e-030
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2 / +1
Query: 938 TVSKIHYENIKMEDSANPIFIDMKYCPNKLCT 1033
+VS + + NI M+ NPI ID YC +K C+
Sbjct: 11383 SVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCS 11478
Score = 35.9 bits (72), Expect(8) = 3e-030
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2 / +1
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG + V++I V+D ++ + GVRIK ++
Sbjct: 11260 SIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTWQ 11370
Score = 30.9 bits (61), Expect(8) = 3e-030
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2 / +1
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTK 1237
C+ +PCT +T+ D+ + S + C NA G+++
Sbjct: 11569 CSDSIPCTNLTLSDIELLPSQGDMLNDPFCWNAYGNSE 11682
Score = 30.4 bits (60), Expect(8) = 3e-030
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVW 472
W+ RV+ + + G G +DG+G W
Sbjct: 10220 WLVFYRVNGMSLEGSGTIDGRGQKWW 10297
Score = 29.9 bits (59), Expect(8) = 3e-030
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / +2
Query: 269 PKGDFLVGQLNFTGPCKGDVTIQV 340
P F+V FTGPCKG + ++V
Sbjct: 9440 PGFSFIVQSTIFTGPCKGGLVLKV 9511
>emb|CT030211.4| M.truncatula DNA sequence from clone MTH2-85A3 on chromosome 3,
complete sequence
Length = 78707
Score = 68.4 bits (143), Expect(6) = 5e-030
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +2 / +3
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
++ D NN +V + N++ H+ + C ++ ++ VTAPG SPNTDGIH+ S +
Sbjct: 53088 AVTFDECNNLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAPGHSPNTDGIHITHSQNV 53267
Query: 701 TITNTVIGVG 730
ITN+ IG G
Sbjct: 53268 FITNSTIGTG 53297
Score = 51.9 bits (107), Expect(6) = 5e-030
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2 / +1
Query: 728 GDDCISIGPGTSKVNITGVTCGPGHGISIGSL 823
GDDCISI G+ V T +TCGPGHGI SL
Sbjct: 53770 GDDCISIVSGSKNVRATDITCGPGHGIRYHSL 53865
Score = 46.4 bits (95), Expect(6) = 5e-030
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2 / +3
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNV 1174
S V + +V ++NI GTS++ A+ L C+ VPC G+ + DV +
Sbjct: 55458 SAVELSNVMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVKI 55586
Score = 34.5 bits (69), Expect(6) = 5e-030
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / +3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG + +V+++ V TL T GVRIK ++
Sbjct: 53940 SIGSLGGGNTQAEVSNVEVNRATLIGTTNGVRIKTWQ 54050
Score = 31.8 bits (63), Expect(6) = 5e-030
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2 / +2
Query: 950 IHYENIKMEDSANPIFIDMKYCPNK 1024
I + NI + + NPI ID KYC K
Sbjct: 54788 IKFINIVVRNVTNPIIIDQKYCDQK 54862
Score = 31.8 bits (63), Expect(6) = 5e-030
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2 / +1
Query: 383 DHGNWIEILRVDNLVITGKGNLDGQGPAVWSKN 481
D WI+ V NL++ G G ++G G W +
Sbjct: 52327 DRKLWIKFENVTNLIVDGGGTINGNGRIWWENS 52425
>gb|AC155892.1| Medicago truncatula chromosome 7 clone mth2-52p13, *** SEQUENCING IN
PROGRESS ***, 7 unordered pieces
Length = 126906
Score = 59.3 bits (123), Expect(8) = 1e-029
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2 / +1
Query: 542 NNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVI 721
+N V G+ + NS FH C+ + ++ + +TAP SPNTDGIH+ +++ + I N+V+
Sbjct: 67177 SNLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVV 67356
Query: 722 GVG 730
G
Sbjct: 67357 SNG 67365
Score = 53.3 bits (110), Expect(8) = 1e-029
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2 / +2
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGI 808
+GDDC+SIG G V+I +TCGPGHGI
Sbjct: 67457 IGDDCVSIGSGCYDVDIKNITCGPGHGI 67540
Score = 38.6 bits (78), Expect(8) = 1e-029
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 149 GSFDITKLGASGNGKTDSTKAVQEAWASAC 238
G D+ K GA G+G TD T++ + AW +AC
Sbjct: 65911 GLLDVRKFGAIGDGITDDTESFKMAWDTAC 66000
Score = 35.9 bits (72), Expect(8) = 1e-029
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2 / +3
Query: 938 TVSKIHYENIKMEDSANPIFIDMKYCPNKLCT 1033
+VS + + NI M+ NPI ID YC +K C+
Sbjct: 67980 SVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCS 68075
Score = 35.9 bits (72), Expect(8) = 1e-029
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2 / +3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG + V++I V+D ++ + GVRIK ++
Sbjct: 67857 SIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTWQ 67967
Score = 30.9 bits (61), Expect(8) = 1e-029
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2 / +3
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTK 1237
C+ +PCT +T+ D+ + S + C NA G+++
Sbjct: 68166 CSDSIPCTNLTLSDIELLPSQGDMLNDPFCWNAYGNSE 68279
Score = 30.4 bits (60), Expect(8) = 1e-029
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVW 472
W+ RV+ + + G G +DG+G W
Sbjct: 66817 WLVFYRVNGMSLEGSGTIDGRGQKWW 66894
Score = 29.9 bits (59), Expect(8) = 1e-029
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 269 PKGDFLVGQLNFTGPCKGDVTIQV 340
P F+V FTGPCKG + ++V
Sbjct: 66037 PGFSFIVQSTIFTGPCKGGLVLKV 66108
>gb|AC124965.18| Medicago truncatula clone mth2-7h21, complete sequence
Length = 122160
Score = 68.4 bits (143), Expect(6) = 4e-029
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +2 / -3
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
++ D NN +V + N++ H+ + C ++ ++ VTAPG SPNTDGIH+ S +
Sbjct: 15640 AVTFDECNNLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAPGHSPNTDGIHITHSQNV 15461
Query: 701 TITNTVIGVG 730
ITN+ IG G
Sbjct: 15460 FITNSTIGTG 15431
Score = 51.9 bits (107), Expect(6) = 4e-029
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2 / -1
Query: 728 GDDCISIGPGTSKVNITGVTCGPGHGISIGSL 823
GDDCISI G+ V T +TCGPGHGI SL
Sbjct: 14958 GDDCISIVSGSKNVRATDITCGPGHGIRYHSL 14863
Score = 46.4 bits (95), Expect(6) = 4e-029
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2 / -2
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNV 1174
S V + +V ++NI GTS++ A+ L C+ VPC G+ + DV +
Sbjct: 13271 SAVELSNVMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVKI 13143
Score = 34.5 bits (69), Expect(6) = 4e-029
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / -3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG + +V+++ V TL T GVRIK ++
Sbjct: 14788 SIGSLGGGNTQAEVSNVEVNRATLIGTTNGVRIKTWQ 14678
Score = 31.8 bits (63), Expect(6) = 4e-029
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2 / -2
Query: 950 IHYENIKMEDSANPIFIDMKYCPNK 1024
I + NI + + NPI ID KYC K
Sbjct: 13940 IKFINIVVRNVTNPIIIDQKYCDQK 13866
Score = 31.8 bits (63), Expect(6) = 4e-029
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2 / -1
Query: 383 DHGNWIEILRVDNLVITGKGNLDGQGPAVWSKN 481
D WI+ V NL++ G G ++G G W +
Sbjct: 16401 DRKLWIKFENVTNLIVDGGGTINGNGRIWWENS 16303
>gb|AC166237.5| Medicago truncatula clone mth2-6a22, WORKING DRAFT SEQUENCE, 13 ordered
pieces
Length = 127651
Score = 53.8 bits (111), Expect(6) = 6e-029
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +2 / -2
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVG 730
+S + +NS H+++ CK+ I ++ +TAP SPNTDGI + S+ I I N+ I G
Sbjct: 115956 LSNLNHMNSPKNHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETG 115780
Score = 53.3 bits (110), Expect(6) = 6e-029
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -2
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGISI 814
VGDDCI+I G+S + ITG CGPGHGI +
Sbjct: 115497 VGDDCIAINNGSSVITITGTFCGPGHGIRL 115408
Score = 46.9 bits (96), Expect(6) = 6e-029
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2 / -1
Query: 1037 NGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNV 1174
N S V + DVT+ NI GTS A+ L C + C + +D +N+
Sbjct: 114934 NADSAVEISDVTYSNIRGTSVGEYAIELKCELNIGCNNIVLDHINI 114797
Score = 42.3 bits (86), Expect(6) = 6e-029
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2 / -2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSK 478
WI+ ++ LV+ G+GN+DGQG W K
Sbjct: 116205 WIQFSKISGLVVNGEGNIDGQGSPWWDK 116122
Score = 38.2 bits (77), Expect(6) = 6e-029
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
S+GSLG+ V D+ V++CT T G RIK +E
Sbjct: 115309 SVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIKTFE 115199
Score = 29.9 bits (59), Expect(6) = 6e-029
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / -1
Query: 950 IHYENIKMEDSANPIFIDMKYCPN 1021
I YE+I + + NP+ ID Y PN
Sbjct: 115003 ITYEDIILNEVKNPVIIDQAYNPN 114932
>gb|AJ388838.1|AJ388838 AJ388838 Medicago truncatula R108 Medicago truncatula cDNA clone
MtNo204 similar to polygalacturonase precursor
(pectinase), mRNA sequence
Length = 500
Score = 93.6 bits (198), Expect(3) = 4e-027
Identities = 38/89 (42%), Positives = 56/89 (62%)
Frame = +2 / +1
Query: 491 KKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTD 670
K CK P +L +D ++ +V G+T+ N++ H + RC + I V V +PGDSPNTD
Sbjct: 124 KTNPCKGAPTALTIDTSSSIKVKGLTIQNNQQMHFTISRCDSVRILGVKVASPGDSPNTD 303
Query: 671 GIHMGDSSGITITNTVIGVGDDCISIGPG 757
GIH+ +S+ + + + IG GDDCISI G
Sbjct: 304 GIHISESTNVIVQDCKIGTGDDCISIVNG 390
Score = 40.9 bits (83), Expect(3) = 4e-027
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 758 TSKVNITGVTCGPGHGISIGSLGR 829
+S + + + CGPGHGISIGSLG+
Sbjct: 392 SSNIKMKRIFCGPGHGISIGSLGK 463
Score = 27.2 bits (53), Expect(3) = 4e-027
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWS 475
W++ ++ V G G +DG G W+
Sbjct: 25 WLDFSKLKKAVFQGSGVIDGSGSKWWA 105
>gb|AC148969.4| Medicago truncatula chromosome 2 clone mth2-58p1, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 80270
Score = 57.9 bits (120), Expect(5) = 7e-027
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +2 / -3
Query: 551 EVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVG 730
++ G T +N H+ + CK +I ++ + APG+SPNTDGI + S I + N+ I G
Sbjct: 885 QIKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATG 706
Query: 731 D 733
+
Sbjct: 705 N 703
Score = 57.0 bits (118), Expect(6) = 7e-024
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +2 / +3
Query: 494 KYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDG 673
KY+ +L + +V +T+LNS+ H+ C ++ + V AP SPNTDG
Sbjct: 8955 KYEASFAM*ALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDG 9134
Query: 674 IHMGDSSGITITNTVIGVG 730
IH+ + G+ I +++I G
Sbjct: 9135 IHISATKGVEIRDSLIRTG 9191
Score = 55.6 bits (115), Expect(5) = 7e-027
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2 / -3
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGISI 814
VGDDCI+I G+S + IT +TCGPGHGI +
Sbjct: 639 VGDDCIAISAGSSVIKITAITCGPGHGIRL 550
Score = 46.0 bits (94), Expect(5) = 7e-027
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2 / -3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIK 910
SIGSLG D V D++VK+CTL +T+ GVRIK
Sbjct: 459 SIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIK 358
Score = 46.0 bits (94), Expect(6) = 7e-024
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2 / +2
Query: 728 GDDCISIGPGTSKVNITGVTCGPGHGI 808
GDDCISI +S+V I ++CGPGHGI
Sbjct: 9968 GDDCISIVRNSSRVWIRNISCGPGHGI 10048
Score = 43.7 bits (89), Expect(6) = 7e-024
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2 / +3
Query: 1028 CTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDV 1168
C S V V +++F NI GTS+T E + C+ PC G+ ++++
Sbjct: 10707 CIVMQTSAVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENI 10847
Score = 38.2 bits (77), Expect(6) = 7e-024
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNK 1024
SKI ++NI ME+ +NPI ID YC ++
Sbjct: 10356 SKITFQNILMENVSNPIIIDQYYCDSR 10436
Score = 36.3 bits (73), Expect(5) = 7e-027
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2 / -3
Query: 947 KIHYENIKMEDSANPIFIDMKYCPNKLCTAN 1039
+I +ENIK + NPI+ID YC N++ N
Sbjct: 186 RITFENIKFVRAHNPIWIDQFYCVNQMVCRN 94
Score = 34.5 bits (69), Expect(5) = 7e-027
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2 / -2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSK 478
WI V+ L+I+GKG +DG+G W +
Sbjct: 1279 WIGFSFVNGLIISGKGTVDGRGSMWWKQ 1196
Score = 30.9 bits (61), Expect(6) = 7e-024
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKN 481
WI V++L + G G +DG G WS++
Sbjct: 8653 WIYFHGVNHLSVEGGGRIDGMGQEWWSRS 8739
Score = 27.6 bits (54), Expect(6) = 7e-024
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2 / +3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG+ + + ++ V L T GVRIK ++
Sbjct: 10137 SIGSLGKSNVWEKIQNVIVDGAYLYNTDNGVRIKTWQ 10247
>gb|CB892670.1|CB892670 EST645462 HOGA Medicago truncatula cDNA clone HOGA-19M10, mRNA
sequence
Length = 786
Score = 72.1 bits (151), Expect(2) = 7e-027
Identities = 22/79 (27%), Positives = 52/79 (65%)
Frame = +2 / +1
Query: 941 VSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSL 1120
V + ++N+++E+ +NPI ID YC + N +S + + ++ ++N++GT+++ +A+
Sbjct: 208 VKGVRFQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISEIMYQNVSGTTNSAKAIKF 387
Query: 1121 LCTAKVPCTGVTMDDVNVE 1177
C+ VPC+ + + +V++E
Sbjct: 388 DCSDTVPCSNLVLSNVDLE 444
Score = 71.2 bits (149), Expect(2) = 7e-027
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2 / +1
Query: 728 GDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRI 907
GDDCISI +S + + + CGPGHGISIGSLG+ VT + + LK T G+RI
Sbjct: 1 GDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVILDTAFLKGTTNGLRI 180
Query: 908 KAYEDAA 928
K ++ A
Sbjct: 181 KTWQGGA 201
>gb|AC144805.7| Medicago truncatula clone mth2-72a11, complete sequence
Length = 78128
Score = 61.6 bits (128), Expect(5) = 7e-026
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2 / +3
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGI 808
+GDDCI++ GTS +NITGVTCGPGHGI
Sbjct: 56862 IGDDCIAMNNGTSNINITGVTCGPGHGI 56945
Score = 52.4 bits (108), Expect(5) = 7e-026
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +2 / +3
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
+L +D +N +++G LNS H+++ + I + +TAP +SPNTDGI +G SS +
Sbjct: 55662 ALHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHSSYV 55841
Query: 701 TITNTVIGVG 730
I ++ I G
Sbjct: 55842 LIQDSTIATG 55871
Score = 42.3 bits (86), Expect(5) = 7e-026
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2 / +2
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNV 1174
S+V + VT++++ GTS++ ++ L C CT + MD VN+
Sbjct: 57704 SEVQISGVTYRDVIGTSNSKTSIKLNCNKNSGCTDIFMDVVNI 57832
Score = 36.8 bits (74), Expect(5) = 7e-026
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2 / +3
Query: 380 KDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKN 481
+D+ WI + ++I G G +DGQG W N
Sbjct: 54084 EDYTKWIVFYYIHGIIIDGGGQIDGQGSTWWKTN 54185
Score = 33.6 bits (67), Expect(5) = 7e-026
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2 / +3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
S+GSLG + V + VK+CT +T G+RIK +
Sbjct: 57039 SVGSLGENGAYEIVEQVYVKNCTFIRTENGMRIKTW 57146
>gb|BI311148.1|BI311148 EST5312898 GESD Medicago truncatula cDNA clone pGESD10G3 5' end,
mRNA sequence
Length = 761
Score = 97.7 bits (207), Expect(2) = 2e-025
Identities = 39/105 (37%), Positives = 64/105 (60%)
Frame = +2 / +2
Query: 503 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHM 682
C +P +L D + +++G+T +N H+ + +D+ I + + +P S NTDGI +
Sbjct: 446 CPRIPTALQFDKCDGLQINGLTHINGPGAHIAVIDSQDITISHIHINSPKKSHNTDGIDL 625
Query: 683 GDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIG 817
+ G+ I + I GDDCI++ G+ VN++ VTCGPGHGIS+G
Sbjct: 626 TRTIGVNIHDIQIESGDDCIAVKGGSQFVNVSNVTCGPGHGISVG 760
Score = 44.1 bits (90), Expect(2) = 2e-025
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 152 SFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKG 277
+ ++ GA G+G+TD +KA +A+ + CGG T+++P G
Sbjct: 89 TLNVIHYGAKGDGRTDDSKAFVDAFKALCGGRYGNTLVVPNG 214
>gb|AC157892.2| Medicago truncatula chromosome 7 clone mte1-84h13, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 121593
Score = 55.1 bits (114), Expect(7) = 1e-024
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +2 / -3
Query: 542 NNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVI 721
+N V G+ + NS F+ C ++ I+ + +TAP SPNTDGIH+ ++ + I N+VI
Sbjct: 35977 SNLTVKGLKVKNSPQFNFRFDACNNVHIESIYITAPKISPNTDGIHLEYANDVKIYNSVI 35798
Query: 722 GVG 730
G
Sbjct: 35797 SNG 35789
Score = 51.5 bits (106), Expect(7) = 1e-024
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2 / -2
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGI 808
+GDDC+SIG G+ V+I +TCGP HGI
Sbjct: 35708 IGDDCVSIGTGSYDVDIKNITCGPSHGI 35625
Score = 36.8 bits (74), Expect(7) = 1e-024
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2 / -1
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG + + V++I V+D +K + G+RIK ++
Sbjct: 34938 SIGSLGNHNTKACVSNITVRDSIIKMSDNGIRIKTWQ 34828
Score = 36.3 bits (73), Expect(7) = 1e-024
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / -3
Query: 149 GSFDITKLGASGNGKTDSTKAVQEAWASAC 238
G FD+ GA G+G D T++ + AW +AC
Sbjct: 36919 GIFDVRSFGAIGDGIEDDTESFKMAWDTAC 36830
Score = 35.9 bits (72), Expect(7) = 1e-024
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2 / -1
Query: 938 TVSKIHYENIKMEDSANPIFIDMKYCPNKLCT 1033
+VS + + NI M NPI ID YC K CT
Sbjct: 34815 SVSGVTFNNIHMISVRNPIIIDQYYCLTKDCT 34720
Score = 28.6 bits (56), Expect(7) = 1e-024
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2 / -1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVW 472
W+ R+ + + G G++DG+G W
Sbjct: 36294 WLVFYRMKGMSLEGSGSIDGRGQKWW 36217
Score = 28.1 bits (55), Expect(7) = 1e-024
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2 / -3
Query: 281 FLVGQLNFTGPCKGDVTIQV 340
F++ FTGPC+GD+ +V
Sbjct: 36781 FVIQSTIFTGPCQGDLIFKV 36722
>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete
sequence
Length = 128810
Score = 56.1 bits (116), Expect(4) = 8e-024
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2 / +2
Query: 572 LNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVG 730
+NS H+++ C D LI ++ + AP DSPNTDGI + S+ I++ +++I G
Sbjct: 25433 INSPRNHISIVGCNDALISNLHIIAPKDSPNTDGIDISTSTNISVQHSIISTG 25591
Score = 50.1 bits (103), Expect(4) = 8e-024
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2 / +1
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGISI 814
+GDDCI+I GT + IT + CGPGHGI +
Sbjct: 25693 IGDDCIAINNGTEFIYITDIQCGPGHGIRL 25782
Score = 35.9 bits (72), Expect(4) = 8e-024
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2 / +1
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
S+GSLG+ D V +I+V + T ++T G RIK +
Sbjct: 25873 SVGSLGKDGDYSTVEEIHVSNITFRETTNGARIKTW 25980
Score = 25.4 bits (49), Expect(4) = 8e-024
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 947 KIHYENIKMEDSANPIFIDMKY 1012
KI YE+I + NP+ ID +Y
Sbjct: 26102 KITYEDIIVFKVENPVIIDQQY 26167
>gb|CA989936.1|CA989936 EST643444 GESD Medicago truncatula cDNA clone GESD-21D12, mRNA
sequence
Length = 724
Score = 113 bits (241), Expect = 9e-024
Identities = 47/121 (38%), Positives = 74/121 (61%)
Frame = +2 / +1
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGD 733
++G+T +N H+ + +D+ I + + +P S NTDGI + + G+ I + I GD
Sbjct: 1 INGLTHINGPGAHIAVIDSQDITISHIHINSPKKSHNTDGIDLTRTIGVNIHDIQIESGD 180
Query: 734 DCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKA 913
DCI++ G+ VN++ VTCGPGHGIS+GSLG + E+ V +VK+CT V+IK
Sbjct: 181 DCIAVKGGSQFVNVSNVTCGPGHGISVGSLGGHGSEEFVQHFSVKNCTFNGADSAVKIKT 360
Query: 914 Y 916
+
Sbjct: 361 W 363
>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete
sequence
Length = 105618
Score = 57.0 bits (118), Expect(6) = 2e-023
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +2 / +3
Query: 494 KYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDG 673
KY+ +L + +V +T+LNS+ H+ C ++ + V AP SPNTDG
Sbjct: 71214 KYEASFAM*ALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDG 71393
Query: 674 IHMGDSSGITITNTVIGVG 730
IH+ + G+ I +++I G
Sbjct: 71394 IHISATKGVEIRDSLIRTG 71450
Score = 46.0 bits (94), Expect(6) = 2e-023
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2 / +2
Query: 728 GDDCISIGPGTSKVNITGVTCGPGHGI 808
GDDCISI +S+V I ++CGPGHGI
Sbjct: 72227 GDDCISIVRNSSRVWIRNISCGPGHGI 72307
Score = 43.7 bits (89), Expect(6) = 2e-023
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2 / +3
Query: 1028 CTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDV 1168
C S V V +++F NI GTS+T E + C+ PC G+ ++++
Sbjct: 72966 CIVMQTSAVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENI 73106
Score = 38.2 bits (77), Expect(6) = 2e-023
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNK 1024
SKI ++NI ME+ +NPI ID YC ++
Sbjct: 72615 SKITFQNILMENVSNPIIIDQYYCDSR 72695
Score = 30.9 bits (61), Expect(6) = 2e-023
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKN 481
WI V++L + G G +DG G WS++
Sbjct: 70912 WIYFHGVNHLSVEGGGRIDGMGQEWWSRS 70998
Score = 27.6 bits (54), Expect(6) = 2e-023
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2 / +3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG+ + + ++ V L T GVRIK ++
Sbjct: 72396 SIGSLGKSNVWEKIQNVIVDGAYLYNTDNGVRIKTWQ 72506
>gb|CG919844.1|CG919844 MBEGX10TF mth2 Medicago truncatula genomic clone 53B20, DNA
sequence
Length = 762
Score = 109 bits (232), Expect = 2e-022
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +2 / +3
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGD 733
++G+T LNS+ FH+ + C+++ + V + AP +SPNTDGIH+ SS ITI I GD
Sbjct: 426 ITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIRTGD 605
Query: 734 DCISIGPGTSKVNITGVTCGPGHGI 808
DCISIGP T + I V CGPGHGI
Sbjct: 606 DCISIGPSTRNLWIEHVECGPGHGI 680
>gb|CG932911.1|CG932911 MBEAS01TR mth2 Medicago truncatula genomic clone 15B1, DNA sequence
Length = 771
Score = 109 bits (232), Expect = 2e-022
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +2 / +3
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGD 733
++G+T LNS+ FH+ + C+++ + V + AP +SPNTDGIH+ SS ITI I GD
Sbjct: 384 ITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIRTGD 563
Query: 734 DCISIGPGTSKVNITGVTCGPGHGI 808
DCISIGP T + I V CGPGHGI
Sbjct: 564 DCISIGPSTRNLWIEHVECGPGHGI 638
>gb|CG946149.1|CG946149 MBENN54TR mth2 Medicago truncatula genomic clone 9I12, DNA sequence
Length = 910
Score = 109 bits (232), Expect = 2e-022
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +2 / +3
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGD 733
++G+T LNS+ FH+ + C+++ + V + AP +SPNTDGIH+ SS ITI I GD
Sbjct: 420 ITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIRTGD 599
Query: 734 DCISIGPGTSKVNITGVTCGPGHGI 808
DCISIGP T + I V CGPGHGI
Sbjct: 600 DCISIGPSTRNLWIEHVECGPGHGI 674
>gb|CG963606.1|CG963606 MBEID55TF mth2 Medicago truncatula genomic clone 60J14, DNA
sequence
Length = 915
Score = 109 bits (232), Expect = 2e-022
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +2 / +3
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGD 733
++G+T LNS+ FH+ + C+++ + V + AP +SPNTDGIH+ SS ITI I GD
Sbjct: 426 ITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIRTGD 605
Query: 734 DCISIGPGTSKVNITGVTCGPGHGI 808
DCISIGP T + I V CGPGHGI
Sbjct: 606 DCISIGPSTRNLWIEHVECGPGHGI 680
>gb|DW016712.1|DW016712 EST1225673 MTY Medicago truncatula cDNA clone MTYAK65, mRNA
sequence
Length = 658
Score = 94.5 bits (200), Expect(2) = 8e-022
Identities = 37/99 (37%), Positives = 55/99 (55%)
Frame = +2 / +3
Query: 182 GNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLAT 361
G +D T A+ AW AC T I+IP G + +G + GPCK + +QVDG + A
Sbjct: 186 GAPNSDITLALGNAWKEACASTTASKIVIPGGTYKMGGIELKGPCKAPIEVQVDGTIQAP 365
Query: 362 TDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSK 478
D SQ K W++ L +++L ++GKG DGQG + +
Sbjct: 366 ADPSQIKAADQWVKFLYMEHLTLSGKGVFDGQGATAYKQ 482
Score = 31.8 bits (63), Expect(2) = 8e-022
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2 / +3
Query: 539 VNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTV 640
VNN V+GVT +SK FH+ + C + TV
Sbjct: 555 VNNSMVTGVTSKDSKNFHVMVLGCNNFTFDGFTV 656
>gb|DW015100.1|DW015100 EST1224061 MTY Medicago truncatula cDNA clone MTYA092, mRNA
sequence
Length = 502
Score = 39.1 bits (79), Expect(5) = 3e-021
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2 / +3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSC 487
W + +D LV+ G G DGQG W N C
Sbjct: 237 WFQFENIDGLVLKGSGVFDGQGSISWPLNDC 329
Score = 38.6 bits (78), Expect(5) = 3e-021
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2 / +2
Query: 545 NGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDS 658
N V VT LNS FH +++ C ++ ++ +TAPG+S
Sbjct: 389 NAIVQDVTSLNSMQFHFHLHGCSNISFTNLHITAPGNS 502
Score = 36.3 bits (73), Expect(5) = 3e-021
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVD 343
T+LIP G F+ GQ F GPC I V+
Sbjct: 96 TVLIPAGTFVTGQTLFAGPCTSPKPITVE 182
Score = 34.1 bits (68), Expect(5) = 3e-021
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2 / +3
Query: 167 KLGASGNGKTDSTKAVQEAWASAC 238
K GA +GKTD+ + ++ AW +AC
Sbjct: 3 KFGAVADGKTDNVEKIRAAWQAAC 74
Score = 27.2 bits (53), Expect(5) = 3e-021
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 326 VTIQVDGNLLATTDLSQY 379
+T+++ G ATTDLS+Y
Sbjct: 171 ITVEIVGKAQATTDLSEY 224
>gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete sequence
Length = 106528
Score = 59.3 bits (123), Expect(5) = 4e-021
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2 / -3
Query: 542 NNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVI 721
+N V G+ + NS FH C+ + ++ + +TAP SPNTDGIH+ +++ + I N+V+
Sbjct: 584 SNLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVV 405
Query: 722 GVG 730
G
Sbjct: 404 SNG 396
Score = 53.3 bits (110), Expect(5) = 4e-021
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2 / -1
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGI 808
+GDDC+SIG G V+I +TCGPGHGI
Sbjct: 304 IGDDCVSIGSGCYDVDIKNITCGPGHGI 221
Score = 38.6 bits (78), Expect(5) = 4e-021
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / -3
Query: 149 GSFDITKLGASGNGKTDSTKAVQEAWASAC 238
G D+ K GA G+G TD T++ + AW +AC
Sbjct: 1850 GLLDVRKFGAIGDGITDDTESFKMAWDTAC 1761
Score = 30.4 bits (60), Expect(5) = 4e-021
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2 / -3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVW 472
W+ RV+ + + G G +DG+G W
Sbjct: 944 WLVFYRVNGMSLEGSGTIDGRGQKWW 867
Score = 29.9 bits (59), Expect(5) = 4e-021
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / -3
Query: 269 PKGDFLVGQLNFTGPCKGDVTIQV 340
P F+V FTGPCKG + ++V
Sbjct: 1724 PGFSFIVQSTIFTGPCKGGLVLKV 1653
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,326,681,206
Number of Sequences: 392609
Number of extensions: 17493524
Number of successful extensions: 75387
Number of sequences better than 1.0e-020: 50
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 60875498322
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)