TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619423.2.1
(886 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI271440.1|BI271440 NF051H11FL1F1096 Developing flower M... 210 1e-076
gb|AC121233.16| Medicago truncatula clone mth2-14g13, compl... 103 2e-056
gb|AC160096.15| Medicago truncatula clone mth2-75a15, WORKI... 103 2e-056
gb|AW329542.2|AW329542 N200788e rootphos(-) Medicago trunca... 212 5e-054
gb|AL367901.1|AL367901 MtBA21A03R1 MtBA Medicago truncatula... 212 5e-054
gb|BI308216.1|BI308216 EST529626 GPOD Medicago truncatula c... 210 4e-053
gb|BQ144988.1|BQ144988 NF110D01DT1F1012 Drought Medicago tr... 204 2e-051
gb|CB892519.1|CB892519 EST649488 KV3 Medicago truncatula cD... 71 8e-044
gb|DW016121.1|DW016121 EST1225082 MTY Medicago truncatula c... 88 1e-036
gb|BG452347.1|BG452347 NF090A09LF1F1066 Developing leaf Med... 105 9e-033
gb|AL385082.1|AL385082 MtBC26C03F1 MtBC Medicago truncatula... 140 2e-032
gb|BQ147654.1|BQ147654 NF045B12FL1F1096 Developing flower M... 90 1e-030
gb|BQ155083.1|BQ155083 NF076B04IR1F1041 Irradiated Medicago... 103 5e-030
gb|AL382695.1|AL382695 MtBC09D11R1 MtBC Medicago truncatula... 132 7e-030
gb|AL385083.1|AL385083 MtBC26C03R1 MtBC Medicago truncatula... 127 2e-028
gb|AJ846059.1|AJ846059 AJ846059 MtSC4 Medicago truncatula c... 124 2e-027
gb|AC125477.13| Medicago truncatula clone mth2-12j8, comple... 90 3e-025
gb|AC125475.11| Medicago truncatula clone mth2-5j2, complet... 90 1e-024
gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone m... 59 2e-023
emb|CR320185.1| mte1-46O9FM1 BAC end, cultivar Jemalong A17... 59 3e-023
gb|CX531823.1|CX531823 s13dNF82A01MJ001_257588 Methyl Jasmo... 59 3e-023
gb|CA922914.1|CA922914 EST640632 MTUS Medicago truncatula c... 65 8e-023
gb|CA920664.1|CA920664 EST638382 MTUS Medicago truncatula c... 59 2e-022
gb|BG648125.1|BG648125 EST509744 HOGA Medicago truncatula c... 54 1e-021
gb|AW773767.1|AW773767 EST332753 KV3 Medicago truncatula cD... 105 1e-021
gb|CB894465.1|CB894465 EST647257 HOGA Medicago truncatula c... 105 1e-021
gb|BG647964.1|BG647964 EST509583 HOGA Medicago truncatula c... 53 2e-021
>gb|BI271440.1|BI271440 NF051H11FL1F1096 Developing flower Medicago truncatula cDNA clone
NF051H11FL 5', mRNA sequence
Length = 653
Score = 210 bits (452), Expect(2) = 1e-076
Identities = 80/108 (74%), Positives = 95/108 (87%)
Frame = +2 / +1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A+ I AL RMDN+Y RSALD+LELQPDL ALVRGAHTF+CPNLG+TSW RLPIHDADFG
Sbjct: 208 ASRIHNALSRMDNEYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFG 387
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI 547
WGRP+FMGPGGIAYEGL+F++PS+ DGSLS+AI+LQ EHM+ F+ +
Sbjct: 388 WGRPIFMGPGGIAYEGLSFIIPSSANDGSLSVAIALQHEHMKVFKDFL 531
Score = 98.7 bits (209), Expect(2) = 1e-076
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +2 / +3
Query: 26 VLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVT 205
+LA HVW+ V ARSLP +Q TKLY ATDGR LQPP P GYFGNVIFT TP+A AG +
Sbjct: 6 MLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAIAGDLM 185
Query: 206 SE 211
++
Sbjct: 186 TK 191
Score = 91.8 bits (194), Expect(2) = 1e-032
Identities = 47/98 (47%), Positives = 53/98 (54%)
Frame = -2 / -1
Query: 534 NFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQLVSP 355
N +CS IA D+LPS LG PS A+PPGPM G P PKSAS IG QLV P
Sbjct: 518 NTFICSC*RAIATDKLPSFAELGIMKESPS*AIPPGPMKIGLPQPKSASCIGSLAQLVIP 339
Query: 354 RFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSA 241
RFG KVCAP S A+ + SLSI +A
Sbjct: 338 RFGHLKVCAPRTRALRSGCSSRKSRADLKYSLSIRDNA 225
Score = 69.8 bits (146), Expect(2) = 1e-032
Identities = 32/56 (57%), Positives = 37/56 (66%)
Frame = -2 / -2
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAAS 28
PA A GV V +TLPK P G GGC++ RPSVA YNLV S G A +T QTC A+
Sbjct: 175 PAIAIGVVVNITLPK*PGGGGGCNLARPSVAIYNLVS*SSGNDLALQTLLQTCPAN 8
>gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete sequence
Length = 129617
Score = 103 bits (220), Expect(4) = 2e-056
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = +2 / -2
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
++TY +LA HVW+ V +ARSLP +Q TKLY TDGR LQPPLP GYFGNVIF+ TP+A
Sbjct: 107524 YTTYEMLAGHVWRSVCIARSLPNDQETKLYIPTDGRSRLQPPLPLGYFGNVIFSTTPIAL 107345
Query: 191 AGKVTSE 211
A + S+
Sbjct: 107344 ASDLISK 107324
Score = 71.2 bits (149), Expect(4) = 2e-056
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2 / -2
Query: 341 RCPNLGLTSWVRLPIHDADFGWGRPVFMGPG 433
+CPNL + SW + PI+DADFGWGRP+FMGPG
Sbjct: 107194 KCPNLAIISWAKFPIYDADFGWGRPIFMGPG 107102
Score = 57.9 bits (120), Expect(4) = 2e-056
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +2 / -2
Query: 434 GIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGEA*TVPTVEGGCY 589
G ++G F++PS+ DGSLS+ ISLQ EHME F++L+ + * +E C+
Sbjct: 107104 GADFDGQCFIIPSSTNDGSLSVVISLQHEHMEVFKELVYDI*RNKIIEVYCH 106949
Score = 45.1 bits (92), Expect(4) = 2e-056
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2 / -2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVR 325
A+ I AL RMD++Y +SA+DYLELQ D+ A+ R
Sbjct: 107308 ASRIHNALLRMDDEYMKSAIDYLELQHDIRAIPR 107207
>gb|AC160096.15| Medicago truncatula clone mth2-75a15, WORKING DRAFT SEQUENCE, 3 ordered
pieces
Length = 128175
Score = 103 bits (220), Expect(4) = 2e-056
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = +2 / -2
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
++TY +LA HVW+ V +ARSLP +Q TKLY TDGR LQPPLP GYFGNVIF+ TP+A
Sbjct: 12935 YTTYEMLAGHVWRSVCIARSLPNDQETKLYIPTDGRSRLQPPLPLGYFGNVIFSTTPIAL 12756
Query: 191 AGKVTSE 211
A + S+
Sbjct: 12755 ASDLISK 12735
Score = 71.2 bits (149), Expect(4) = 2e-056
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2 / -2
Query: 341 RCPNLGLTSWVRLPIHDADFGWGRPVFMGPG 433
+CPNL + SW + PI+DADFGWGRP+FMGPG
Sbjct: 12605 KCPNLAIISWAKFPIYDADFGWGRPIFMGPG 12513
Score = 57.9 bits (120), Expect(4) = 2e-056
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +2 / -2
Query: 434 GIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGEA*TVPTVEGGCY 589
G ++G F++PS+ DGSLS+ ISLQ EHME F++L+ + * +E C+
Sbjct: 12515 GADFDGQCFIIPSSTNDGSLSVVISLQHEHMEVFKELVYDI*RNKIIEVYCH 12360
Score = 45.1 bits (92), Expect(4) = 2e-056
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2 / -2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVR 325
A+ I AL RMD++Y +SA+DYLELQ D+ A+ R
Sbjct: 12719 ASRIHNALLRMDDEYMKSAIDYLELQHDIRAIPR 12618
>gb|AW329542.2|AW329542 N200788e rootphos(-) Medicago truncatula cDNA clone MHRP-21C8, mRNA
sequence
Length = 587
Score = 212 bits (458), Expect = 5e-054
Identities = 85/139 (61%), Positives = 103/139 (74%)
Frame = +2 / +1
Query: 131 PPLPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDL 310
PP P + + T +T A+ I AL RMDN+Y RSALD+LELQPDL
Sbjct: 121 PPPPGYFGNVIFTTTPIAIAGDLMTKPTWYAASRIHNALSRMDNEYLRSALDFLELQPDL 300
Query: 311 SALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGS 490
ALVRGAHTF+CPNLG+TSW RLPIHDADFGWGRP+FMGPGGIAYEGL+F++PS+ DGS
Sbjct: 301 KALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSANDGS 480
Query: 491 LSIAISLQAEHMEKFRKLI 547
LS+AI+LQ EHM+ F+ +
Sbjct: 481 LSVAIALQHEHMKVFKDFL 537
Score = 98.7 bits (209), Expect(2) = 1e-026
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 26 VLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVT 205
+LA HVW+ V ARSLP +Q TKLY ATDGR LQPP P GYFGNVIFT TP+A AG +
Sbjct: 13 MLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAIAGDLM 192
Query: 206 SE 211
++
Sbjct: 193 TK 198
Score = 91.8 bits (194), Expect(2) = 7e-033
Identities = 47/98 (47%), Positives = 53/98 (54%)
Frame = -2 / -1
Query: 534 NFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQLVSP 355
N +CS IA D+LPS LG PS A+PPGPM G P PKSAS IG QLV P
Sbjct: 524 NTFICSC*RAIATDKLPSFAELGIMKESPS*AIPPGPMKIGLPQPKSASCIGSLAQLVIP 345
Query: 354 RFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSA 241
RFG KVCAP S A+ + SLSI +A
Sbjct: 344 RFGHLKVCAPRTRALRSGCSSRKSRADLKYSLSIRDNA 231
Score = 70.7 bits (148), Expect(2) = 7e-033
Identities = 34/69 (49%), Positives = 42/69 (60%)
Frame = -2 / -1
Query: 234 MTAAPSASSLVTLPASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARE 55
+ AA ++ PA A GV V +TLPK P G GGC++ RPSVA YNLV S G A +
Sbjct: 221 LLAAYHVGFVMRSPAIAIGVVVNITLPK*PGGGGGCNLARPSVAIYNLVS*SSGNDLALQ 42
Query: 54 THFQTCAAS 28
T QTC A+
Sbjct: 41 TLLQTCPAN 15
Score = 42.8 bits (87), Expect(2) = 1e-026
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +1 / +3
Query: 253 DGQRLLPLSVRLPGASTGSVSTCAWSAYLPLPEPRAHQLGAPSYP*C*LRMGPACVHGAR 432
+GQR+ +S A+T S +C+ Y + E + LG S *C* +G A HG
Sbjct: 243 NGQRVFEISS*FS*ATT*S*GSCSRCTYFQVSESWYY*LG*ASDT*C*FWLGKAYFHGTW 422
Query: 433 WHCV*RS 453
W C+*R+
Sbjct: 423 WDCL*RA 443
>gb|AL367901.1|AL367901 MtBA21A03R1 MtBA Medicago truncatula cDNA clone MtBA21A03 T7, mRNA
sequence
Length = 532
Score = 212 bits (458), Expect = 5e-054
Identities = 85/139 (61%), Positives = 103/139 (74%)
Frame = +2 / +1
Query: 131 PPLPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDL 310
PP P + + T +T A+ I AL RMDN+Y RSALD+LELQPDL
Sbjct: 34 PPPPGYFGNVIFTTTPIAIAGDLMTKPTWYAASRIHNALSRMDNEYLRSALDFLELQPDL 213
Query: 311 SALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGS 490
ALVRGAHTF+CPNLG+TSW RLPIHDADFGWGRP+FMGPGGIAYEGL+F++PS+ DGS
Sbjct: 214 KALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSANDGS 393
Query: 491 LSIAISLQAEHMEKFRKLI 547
LS+AI+LQ EHM+ F+ +
Sbjct: 394 LSVAIALQHEHMKVFKDFL 450
Score = 91.8 bits (194), Expect(2) = 2e-026
Identities = 47/98 (47%), Positives = 53/98 (54%)
Frame = -2 / -3
Query: 534 NFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQLVSP 355
N +CS IA D+LPS LG PS A+PPGPM G P PKSAS IG QLV P
Sbjct: 437 NTFICSC*RAIATDKLPSFAELGIMKESPS*AIPPGPMKIGLPQPKSASCIGSLAQLVIP 258
Query: 354 RFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSA 241
RFG KVCAP S A+ + SLSI +A
Sbjct: 257 RFGHLKVCAPRTRALRSGCSSRKSRADLKYSLSIRDNA 144
Score = 49.2 bits (101), Expect(2) = 2e-026
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = -2 / -3
Query: 234 MTAAPSASSLVTLPASASGVAVKMTLPKYPSGSGGCSV*RPSVA 103
+ AA ++ PA A GV V +TLPK P G GGC++ RPSVA
Sbjct: 134 LLAAYHVGFVMRSPAIAIGVVVNITLPK*PGGGGGCNLARPSVA 3
>gb|BI308216.1|BI308216 EST529626 GPOD Medicago truncatula cDNA clone pGPOD-2O18 5' end,
mRNA sequence
Length = 572
Score = 210 bits (452), Expect = 4e-053
Identities = 80/108 (74%), Positives = 95/108 (87%)
Frame = +2 / -1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A+ I AL RMDN+Y RSALD+LELQPDL ALVRGAHTF+CPNLG+TSW RLPIHDADFG
Sbjct: 524 ASRIHNALSRMDNEYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFG 345
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI 547
WGRP+FMGPGGIAYEGL+F++PS+ DGSLS+AI+LQ EHM+ F+ +
Sbjct: 344 WGRPIFMGPGGIAYEGLSFIIPSSANDGSLSVAIALQHEHMKVFKDFL 201
>gb|BQ144988.1|BQ144988 NF110D01DT1F1012 Drought Medicago truncatula cDNA clone NF110D01DT
5', mRNA sequence
Length = 586
Score = 204 bits (440), Expect = 2e-051
Identities = 77/102 (75%), Positives = 91/102 (89%)
Frame = +2 / -1
Query: 242 ALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVF 421
AL MDN+Y RSALD+LELQPDL ALVRGAHTF+CPNLG+TSW RLPIHDADFGWGRP+F
Sbjct: 568 ALSXMDNEYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIF 389
Query: 422 MGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI 547
MGPGGIAYEGL+F++PS+ DGSLS+AI+LQ EHM+ F+ +
Sbjct: 388 MGPGGIAYEGLSFIIPSSANDGSLSVAIALQHEHMKVFKDFL 263
>gb|CB892519.1|CB892519 EST649488 KV3 Medicago truncatula cDNA clone KV3-54D22, mRNA
sequence
Length = 761
Score = 71.2 bits (149), Expect(4) = 8e-044
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2 / -3
Query: 341 RCPNLGLTSWVRLPIHDADFGWGRPVFMGPG 433
+CPNL + SW + PI+DADFGWGRP+FMGPG
Sbjct: 405 KCPNLAIISWAKFPIYDADFGWGRPIFMGPG 313
Score = 61.1 bits (127), Expect(4) = 8e-044
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +2 / -3
Query: 74 PPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSE 211
P +Q TKLY TDGR L PPLP FGNVIF+ TP+A A + S+
Sbjct: 672 PNDQETKLYIPTDGRSRLHPPLPWVTFGNVIFSTTPIALASDLISK 535
Score = 57.9 bits (120), Expect(4) = 8e-044
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +2 / -3
Query: 434 GIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGEA*TVPTVEGGCY 589
G ++G F++PS+ DGSLS+ ISLQ EHME F++L+ + * +E C+
Sbjct: 315 GADFDGQCFIIPSSTNDGSLSVVISLQHEHMEVFKELVYDI*RNKIIEVYCH 160
Score = 45.1 bits (92), Expect(4) = 8e-044
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2 / -3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVR 325
A+ I AL RMD++Y +SA+DYLELQ D+ A+ R
Sbjct: 519 ASRIHNALLRMDDEYMKSAIDYLELQHDIRAIPR 418
>gb|DW016121.1|DW016121 EST1225082 MTY Medicago truncatula cDNA clone MTYAD40, mRNA
sequence
Length = 884
Score = 87.7 bits (185), Expect(3) = 1e-036
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +2 / +1
Query: 314 ALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFM 424
ALVRGAHTF+CPNLG+TSW RLPIHDADFG G+P+FM
Sbjct: 772 ALVRGAHTFKCPNLGITSWARLPIHDADFGLGKPIFM 882
Score = 81.3 bits (171), Expect(3) = 1e-036
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = +2 / +2
Query: 65 RSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSE 211
RSLP +Q TKLY ATDGR LQPP P GYFGNVIFT TP+A AG + ++
Sbjct: 521 RSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAIAGDLMTK 667
Score = 24.4 bits (47), Expect(3) = 1e-036
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 7 PVQHICSASGTCLEMCL 57
P+Q + S TCLE CL
Sbjct: 464 PLQFL*DVSRTCLEKCL 514
>gb|BG452347.1|BG452347 NF090A09LF1F1066 Developing leaf Medicago truncatula cDNA clone
NF090A09LF 5', mRNA sequence
Length = 647
Score = 105 bits (223), Expect(2) = 9e-033
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +2 / +3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V ARSLP +Q TKLY ATDGR LQPP P GYFGNVIFT TP+A
Sbjct: 267 YSSYEMLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAI 446
Query: 191 AGKVTSE 211
AG + ++
Sbjct: 447 AGDLMTK 467
Score = 57.0 bits (118), Expect(2) = 9e-033
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2 / +2
Query: 323 RGAHTFRCPNLGLTSWVRLPIH 388
RGAHTF+CPNLG+TSW RLPIH
Sbjct: 581 RGAHTFKCPNLGITSWARLPIH 646
>gb|AL385082.1|AL385082 MtBC26C03F1 MtBC Medicago truncatula cDNA clone MtBC26C03 T3, mRNA
sequence
Length = 477
Score = 140 bits (301), Expect = 2e-032
Identities = 57/96 (59%), Positives = 66/96 (68%)
Frame = +2 / +1
Query: 131 PPLPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDL 310
PP P + + T +T A+ I AL RMDN+Y RSALD+LELQPDL
Sbjct: 190 PPPPGYFGNVIFTTTPIAIAGDLMTKPTWYAASRIHNALSRMDNEYLRSALDFLELQPDL 369
Query: 311 SALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPV 418
ALVRGAHTF+CPNLG+TSW RLPIHDADFGWGRP+
Sbjct: 370 KALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPI 477
Score = 105 bits (223), Expect = 1e-021
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +2 / +1
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V ARSLP +Q TKLY ATDGR LQPP P GYFGNVIFT TP+A
Sbjct: 67 YSSYEMLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAI 246
Query: 191 AGKVTSE 211
AG + ++
Sbjct: 247 AGDLMTK 267
Score = 70.7 bits (148), Expect(2) = 7e-022
Identities = 34/69 (49%), Positives = 42/69 (60%)
Frame = -2 / -2
Query: 234 MTAAPSASSLVTLPASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARE 55
+ AA ++ PA A GV V +TLPK P G GGC++ RPSVA YNLV S G A +
Sbjct: 290 LLAAYHVGFVMRSPAIAIGVVVNITLPK*PGGGGGCNLARPSVAIYNLVS*SSGNDLALQ 111
Query: 54 THFQTCAAS 28
T QTC A+
Sbjct: 110 TLLQTCPAN 84
Score = 54.7 bits (113), Expect(2) = 7e-022
Identities = 28/58 (48%), Positives = 31/58 (53%)
Frame = -2 / -2
Query: 414 GRPHPKSASWIGRRTQLVSPRFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSA 241
G P PKSAS IG QLV PRFG KVCAP S A+ + SLSI +A
Sbjct: 473 GLPQPKSASCIGSLAQLVIPRFGHLKVCAPRTRALRSGCSSRKSRADLKYSLSIRDNA 300
>gb|BQ147654.1|BQ147654 NF045B12FL1F1096 Developing flower Medicago truncatula cDNA clone
NF045B12FL 5', mRNA sequence
Length = 701
Score = 89.5 bits (189), Expect(2) = 1e-030
Identities = 30/86 (34%), Positives = 57/86 (66%)
Frame = +2 / +3
Query: 269 CRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYE 448
C+ +LD++ + + A + PN+ +TSW+ +P+++ADFGWG+P+F GP + +
Sbjct: 432 CQESLDFIRTSIVENGKAKAATFYGNPNMNITSWMSMPVYEADFGWGKPLFFGPALVLPD 611
Query: 449 GLAFVLPSANGDGSLSIAISLQAEHM 526
G +++ S++G+GSL ++ LQ+ HM
Sbjct: 612 GRLYIMRSSSGNGSLLGSVHLQSRHM 689
Score = 67.5 bits (141), Expect(2) = 1e-030
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +2 / +3
Query: 8 RFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTA 175
RFSTY V+ H+W+C AR L QPT + D R + PPLP YFGN + A
Sbjct: 135 RFSTYEVVTTHLWRCACKARGLDDVQPTVIRLPGDIRNRINPPLPQNYFGNALAVA 302
>gb|BQ155083.1|BQ155083 NF076B04IR1F1041 Irradiated Medicago truncatula cDNA clone
NF076B04IR 5', mRNA sequence
Length = 517
Score = 103 bits (220), Expect(2) = 5e-030
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +2 / +3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ VS AR+LP +Q TKLY ATDGR LQP LP GYFGNVIFT TP+A
Sbjct: 216 YSSYEMLAGHVWRSVSKARALPVDQETKLYIATDGRSRLQPSLPQGYFGNVIFTTTPIAV 395
Query: 191 AGKVTSE 211
A + S+
Sbjct: 396 AVDLMSK 416
Score = 49.2 bits (101), Expect(2) = 5e-030
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2 / +3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPD 307
A+ I AL +MDNDY RSALDYLELQPD
Sbjct: 432 ASRIHNALLQMDNDYLRSALDYLELQPD 515
>gb|AL382695.1|AL382695 MtBC09D11R1 MtBC Medicago truncatula cDNA clone MtBC09D11 T7, mRNA
sequence
Length = 416
Score = 132 bits (283), Expect = 7e-030
Identities = 48/66 (72%), Positives = 59/66 (89%)
Frame = +2 / +1
Query: 350 NLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHME 529
NLG+TSW RLPIHDADFGWGRP+FMGPGGIAYEGL+F++PS+ DGSLS+AI+LQ EHM+
Sbjct: 1 NLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSANDGSLSVAIALQHEHMK 180
Query: 530 KFRKLI 547
F+ +
Sbjct: 181 VFKDFL 198
>gb|AL385083.1|AL385083 MtBC26C03R1 MtBC Medicago truncatula cDNA clone MtBC26C03 T7, mRNA
sequence
Length = 404
Score = 127 bits (273), Expect = 2e-028
Identities = 46/64 (71%), Positives = 57/64 (89%)
Frame = +2 / +1
Query: 356 GLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKF 535
G+TSW RLPIHDADFGWGRP+FMGPGGIAYEGL+F++PS+ DGSLS+AI+LQ EHM+ F
Sbjct: 1 GITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSANDGSLSVAIALQHEHMKVF 180
Query: 536 RKLI 547
+ +
Sbjct: 181 KDFL 192
>gb|AJ846059.1|AJ846059 AJ846059 MtSC4 Medicago truncatula cDNA clone MtC403E11N1, mRNA
sequence
Length = 242
Score = 124 bits (266), Expect = 2e-027
Identities = 45/64 (70%), Positives = 56/64 (87%)
Frame = +2 / -2
Query: 356 GLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKF 535
G+TSW RLPIHD DFGWGRP+FMGPGGIAYEGL+F++PS+ DGSLS+AI+LQ EHM+ F
Sbjct: 238 GITSWGRLPIHDGDFGWGRPIFMGPGGIAYEGLSFIIPSSANDGSLSVAIALQHEHMKVF 59
Query: 536 RKLI 547
+ +
Sbjct: 58 KDFL 47
>gb|AC125477.13| Medicago truncatula clone mth2-12j8, complete sequence
Length = 127843
Score = 89.5 bits (189), Expect(3) = 3e-025
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = +2 / -3
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHM 526
PNLG+ SW+ LPI+ DFGWG+ V+MGPG +G + +LPS + DGSL +AI LQ HM
Sbjct: 79124 PNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHDSDGDSLLLPSYDDDGSLLVAICLQEVHM 78945
Query: 527 EKFRK 541
+ F++
Sbjct: 78944 DAFKR 78930
Score = 55.6 bits (115), Expect(3) = 3e-025
Identities = 24/67 (35%), Positives = 33/67 (49%)
Frame = +2 / -3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
++ Y L HVW+ S AR +Q T L D R ++P LP GYFGN +
Sbjct: 79490 YTRYETLTGHVWRSASKARGHANDQQTSLGVCVDWRNRVEPNLPKGYFGNGTLDVVATSL 79311
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 79310 AGDLISK 79290
Score = 28.1 bits (55), Expect(3) = 3e-025
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -1
Query: 533 FRKLIGEA*TVPTVEGGCYWARRIMLCPN 619
+R + GE VP GG +W R CP+
Sbjct: 16066 WRGVAGEVVEVPGCGGGAFWLGRKRRCPS 15980
>gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete sequence
Length = 165679
Score = 89.5 bits (189), Expect(2) = 1e-024
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = +2 / +2
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHM 526
PNLG+ SW+ LPI+ DFGWG+ V+MGPG +G + +LPS + DGSL +AI LQ HM
Sbjct: 8828 PNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHDSDGDSLLLPSYDDDGSLLVAICLQEVHM 9007
Query: 527 EKFRK 541
+ F++
Sbjct: 9008 DAFKR 9022
Score = 55.6 bits (115), Expect(2) = 1e-024
Identities = 24/67 (35%), Positives = 33/67 (49%)
Frame = +2 / +2
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
++ Y L HVW+ S AR +Q T L D R ++P LP GYFGN +
Sbjct: 8462 YTRYETLTGHVWRSASKARGHANDQQTSLGVCVDWRNRVEPNLPKGYFGNGTLDVVATSL 8641
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 8642 AGDLISK 8662
>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete
sequence
Length = 123655
Score = 59.3 bits (123), Expect(4) = 2e-023
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2 / +3
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISL 511
PN+ + SW+ DADFG G PV+ GPG + EG AFV+ + GD ++I++ +
Sbjct: 49491 PNIFVVSWMNFSYKDADFGLGEPVYFGPGYMDSEGKAFVMNNNGGDIVVAISLEV 49655
Score = 40.0 bits (81), Expect(4) = 2e-023
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 80 EQPTKLYCATDGRQTLQPPLPDGYFGNVIF 169
+QPT+L + R L+PPLP GY GN F
Sbjct: 49188 DQPTRLSTLVNCRNRLKPPLPSGYAGNAAF 49277
Score = 32.7 bits (65), Expect(4) = 2e-023
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2 / +3
Query: 212 LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAH 334
L + + AL+R+ +Y SALDY++ + D+ L H
Sbjct: 49326 LGDAVEDVHKALERVTEEYVMSALDYIDREKDMDLLRYNFH 49448
Score = 32.7 bits (65), Expect(4) = 2e-023
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2 / +3
Query: 11 FSTYAVLAAHVWKCVSLARSL 73
+ST+ V+A ++W+CVS AR +
Sbjct: 49116 YSTFEVIAGYLWRCVSKARCM 49178
>emb|CR320185.1| mte1-46O9FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 778
Score = 59.3 bits (123), Expect(4) = 3e-023
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2 / +1
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISL 511
PN+ + SW+ DADFG G PV+ GPG + EG AFV+ + GD ++I++ +
Sbjct: 610 PNIFVVSWMNFSYKDADFGLGEPVYFGPGYMDSEGKAFVMNNNGGDIVVAISLEV 774
Score = 40.0 bits (81), Expect(4) = 3e-023
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 80 EQPTKLYCATDGRQTLQPPLPDGYFGNVIF 169
+QPT+L + R L+PPLP GY GN F
Sbjct: 307 DQPTRLSTLVNCRNRLKPPLPSGYAGNAAF 396
Score = 32.7 bits (65), Expect(4) = 3e-023
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2 / +1
Query: 212 LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAH 334
L + + AL+R+ +Y SALDY++ + D+ L H
Sbjct: 445 LGDAVEDVHKALERVTEEYVMSALDYIDREKDMDLLRYNFH 567
Score = 32.7 bits (65), Expect(4) = 3e-023
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 11 FSTYAVLAAHVWKCVSLARSL 73
+ST+ V+A ++W+CVS AR +
Sbjct: 235 YSTFEVIAGYLWRCVSKARCM 297
>gb|CX531823.1|CX531823 s13dNF82A01MJ001_257588 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 615
Score = 59.3 bits (123), Expect(4) = 3e-023
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2 / +1
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISL 511
PN+ + SW+ DADFG G PV+ GPG + EG AFV+ + GD ++I++ +
Sbjct: 439 PNIFVVSWMNFSYKDADFGLGEPVYFGPGYMDSEGKAFVMNNNGGDIVVAISLEV 603
Score = 40.0 bits (81), Expect(4) = 3e-023
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 80 EQPTKLYCATDGRQTLQPPLPDGYFGNVIF 169
+QPT+L + R L+PPLP GY GN F
Sbjct: 136 DQPTRLSTLVNCRNRLKPPLPSGYAGNAAF 225
Score = 32.7 bits (65), Expect(4) = 3e-023
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2 / +1
Query: 212 LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAH 334
L + + AL+R+ +Y SALDY++ + D+ L H
Sbjct: 274 LGDAVEDVHKALERVTEEYVMSALDYIDREKDMDLLRYNFH 396
Score = 32.7 bits (65), Expect(4) = 3e-023
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 11 FSTYAVLAAHVWKCVSLARSL 73
+ST+ V+A ++W+CVS AR +
Sbjct: 64 YSTFEVIAGYLWRCVSKARCM 126
>gb|CA922914.1|CA922914 EST640632 MTUS Medicago truncatula cDNA clone MTUS-60B6, mRNA
sequence
Length = 756
Score = 65.2 bits (136), Expect(3) = 8e-023
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = +2 / -2
Query: 14 STYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEA 193
ST+ L+A VW+ + A + P Q TKL A DGR PP+P GYFGN I L +A
Sbjct: 698 STFEALSAFVWRTRTSALKMHPNQQTKLLFAVDGRPRFIPPIPKGYFGNAIVLTNSLCKA 519
Query: 194 GKV 202
++
Sbjct: 518 NEL 510
Score = 53.3 bits (110), Expect(3) = 8e-023
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2 / -2
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W +L DFGWG P+ GP + + L G +S+ + L A ME+F
Sbjct: 374 ITTWTKLSFDTTDFGWGEPLCSGPVTLPNTEVILFLSHGQGRKGISVLLGLPASAMERFE 195
Query: 539 KLI 547
+L+
Sbjct: 194 ELV 186
Score = 27.6 bits (54), Expect(3) = 8e-023
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2 / -2
Query: 230 VIQGALDRMDNDYCRSALDYLEL 298
++ A+D + + Y RSA+DY E+
Sbjct: 479 LVHKAIDMVTDSYMRSAIDYFEV 411
>gb|CA920664.1|CA920664 EST638382 MTUS Medicago truncatula cDNA clone MTUS-30H2, mRNA
sequence
Length = 661
Score = 59.3 bits (123), Expect(4) = 2e-022
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2 / -2
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISL 511
PN+ + SW+ DADFG G PV+ GPG + EG AFV+ + GD ++I++ +
Sbjct: 255 PNIFVVSWMNFSYKDADFGLGEPVYFGPGYMDSEGKAFVMNNNGGDIVVAISLEV 91
Score = 40.0 bits (81), Expect(4) = 2e-022
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / -2
Query: 80 EQPTKLYCATDGRQTLQPPLPDGYFGNVIF 169
+QPT+L + R L+PPLP GY GN F
Sbjct: 558 DQPTRLSTLVNCRNRLKPPLPSGYAGNAAF 469
Score = 32.7 bits (65), Expect(4) = 2e-022
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2 / -2
Query: 212 LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAH 334
L + + AL+R+ +Y SALDY++ + D+ L H
Sbjct: 420 LGDAVEDVHKALERVTEEYVMSALDYIDREKDMDLLRYNFH 298
Score = 29.9 bits (59), Expect(4) = 2e-022
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2 / -2
Query: 11 FSTYAVLAAHVWKCVSLARSL 73
+S + V+A ++W+CVS AR +
Sbjct: 630 YSLFEVIAGYLWRCVSKARCM 568
>gb|BG648125.1|BG648125 EST509744 HOGA Medicago truncatula cDNA clone pHOGA-18L12 5' end,
mRNA sequence
Length = 591
Score = 53.8 bits (111), Expect(4) = 1e-021
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2 / +1
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGD 484
PN+ + SW+ DADFG G PV+ GPG + E AFV+ + GD
Sbjct: 427 PNIFVVSWMNFSYKDADFGLGEPVYFGPGYMDSERKAFVMNNNGGD 564
Score = 40.0 bits (81), Expect(4) = 1e-021
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 80 EQPTKLYCATDGRQTLQPPLPDGYFGNVIF 169
+QPT+L + R L+PPLP GY GN F
Sbjct: 124 DQPTRLSTLVNCRNRLKPPLPSGYAGNAAF 213
Score = 32.7 bits (65), Expect(4) = 1e-021
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2 / +1
Query: 212 LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAH 334
L + + AL+R+ +Y SALDY++ + D+ L H
Sbjct: 262 LGDAVEDVHKALERVTEEYVMSALDYIDREKDMDLLRYNFH 384
Score = 32.7 bits (65), Expect(4) = 1e-021
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 11 FSTYAVLAAHVWKCVSLARSL 73
+ST+ V+A ++W+CVS AR +
Sbjct: 52 YSTFEVIAGYLWRCVSKARCM 114
>gb|AW773767.1|AW773767 EST332753 KV3 Medicago truncatula cDNA clone pKV3-15H16, mRNA
sequence
Length = 519
Score = 105 bits (223), Expect = 1e-021
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +2 / +1
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V ARSLP +Q TKLY ATDGR LQPP P GYFGNVIFT TP+A
Sbjct: 262 YSSYEMLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAI 441
Query: 191 AGKVTSE 211
AG + ++
Sbjct: 442 AGDLMTK 462
>gb|CB894465.1|CB894465 EST647257 HOGA Medicago truncatula cDNA clone HOGA-31E16, mRNA
sequence
Length = 413
Score = 105 bits (223), Expect = 1e-021
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +2 / +3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V ARSLP +Q TKLY ATDGR LQPP P GYFGNVIFT TP+A
Sbjct: 42 YSSYEMLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAI 221
Query: 191 AGKVTSE 211
AG + ++
Sbjct: 222 AGDLMTK 242
Score = 104 bits (222), Expect = 2e-021
Identities = 45/83 (54%), Positives = 53/83 (63%)
Frame = +2 / +3
Query: 131 PPLPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDL 310
PP P + + T +T A+ I AL RMDN+Y RSALD+LELQPDL
Sbjct: 165 PPPPGYFGNVIFTTTPIAIAGDLMTKPTWYAASRIHNALSRMDNEYLRSALDFLELQPDL 344
Query: 311 SALVRGAHTFRCPNLGLTSWVRL 379
ALVRGAHTF+CPNLG+TSW RL
Sbjct: 345 KALVRGAHTFKCPNLGITSWARL 413
>gb|BG647964.1|BG647964 EST509583 HOGA Medicago truncatula cDNA clone pHOGA-18M2 5' end,
mRNA sequence
Length = 574
Score = 53.3 bits (110), Expect(4) = 2e-021
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +2 / +1
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVL 466
PN+ + SW+ DADFG G PV+ GPG + EG AFV+
Sbjct: 427 PNIFVVSWMNFSYKDADFGLGEPVYFGPGYMDSEGKAFVM 546
Score = 40.0 bits (81), Expect(4) = 2e-021
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 80 EQPTKLYCATDGRQTLQPPLPDGYFGNVIF 169
+QPT+L + R L+PPLP GY GN F
Sbjct: 124 DQPTRLSTLVNCRNRLKPPLPSGYAGNAAF 213
Score = 32.7 bits (65), Expect(4) = 2e-021
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2 / +1
Query: 212 LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAH 334
L + + AL+R+ +Y SALDY++ + D+ L H
Sbjct: 262 LGDAVEDVHKALERVTEEYVMSALDYIDREKDMDLLRYNFH 384
Score = 32.7 bits (65), Expect(4) = 2e-021
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 11 FSTYAVLAAHVWKCVSLARSL 73
+ST+ V+A ++W+CVS AR +
Sbjct: 52 YSTFEVIAGYLWRCVSKARCM 114
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 883,172,216
Number of Sequences: 392609
Number of extensions: 12109584
Number of successful extensions: 51680
Number of sequences better than 1.0e-020: 32
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 30030549804
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)