TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521569.2.1
(887 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC166046.6| Medicago truncatula clone mth2-6p7, WORKING ... 113 6e-074
gb|AC170856.1| Medicago truncatula chromosome 2 clone mth2-... 110 1e-072
gb|AL375054.1|AL375054 MtBB11A08F1 MtBB Medicago truncatula... 197 2e-072
gb|AL382395.1|AL382395 MtBC06E08F1 MtBC Medicago truncatula... 174 1e-066
gb|BG450908.1|BG450908 NF095E08DT1F1065 Drought Medicago tr... 220 6e-064
gb|BG448529.1|BG448529 NF036G02RT1F1017 Developing root Med... 225 4e-063
gb|AC138171.17| Medicago truncatula clone mth2-7f10, comple... 104 7e-057
gb|AL382396.1|AL382396 MtBC06E08R1 MtBC Medicago truncatula... 199 1e-052
gb|AW690621.2|AW690621 NF036F01ST1F1000 Developing stem Med... 207 2e-052
gb|AC147428.6| Medicago truncatula clone mth2-34i10, comple... 121 5e-052
gb|BG645345.1|BG645345 EST506964 KV3 Medicago truncatula cD... 194 1e-048
gb|AL375055.1|AL375055 MtBB11A08R1 MtBB Medicago truncatula... 177 2e-043
gb|AL385470.1|AL385470 MtBC28G06F1 MtBC Medicago truncatula... 171 2e-041
gb|CB894606.1|CB894606 EST647398 HOGA Medicago truncatula c... 129 5e-029
gb|AL385177.1|AL385177 MtBC26G12F1 MtBC Medicago truncatula... 122 1e-026
gb|BG453049.1|BG453049 NF091B08LF1F1062 Developing leaf Med... 108 2e-022
>gb|AC166046.6| Medicago truncatula clone mth2-6p7, WORKING DRAFT SEQUENCE, 8
unordered pieces
Length = 118925
Score = 113 bits (242), Expect(4) = 6e-074
Identities = 44/95 (46%), Positives = 69/95 (72%)
Frame = -1 / +3
Query: 887 EVGSGXTTRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAM 708
++G +S + ++ RSV+TIAF+F+YE+H++E+VA MARQYVR++++SVQRVA+
Sbjct: 7695 DIGPTGNRASSDNAGNSGCVRSVMTIAFEFAYESHMQENVACMARQYVRSIISSVQRVAL 7874
Query: 707 AIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRF 603
A++PS + ++ G+PEA TLA WI SYR+
Sbjct: 7875 ALSPSNLSSHAGLRSPLGTPEAQTLAHWICNSYRY 7979
Score = 99.1 bits (210), Expect(4) = 6e-074
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1 / +2
Query: 350 GFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
GFA L GG+C+SSMGRPVSYE+AVAWKVL+D+ HC+ FMFVNWSFV*
Sbjct: 9425 GFACLQGGICLSSMGRPVSYERAVAWKVLNDEQNAHCICFMFVNWSFV* 9571
Score = 98.2 bits (208), Expect(4) = 6e-074
Identities = 40/56 (71%), Positives = 50/56 (89%)
Frame = -1 / +2
Query: 503 KAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYL 336
+A PVFTF+NQAGLDMLETTL+ALQDISLEKI DD+GRK L +E+P+I+QQ + +L
Sbjct: 9116 QAMPVFTFSNQAGLDMLETTLVALQDISLEKIFDDNGRKTLFSEFPQIIQQVYNFL 9283
Score = 70.7 bits (148), Expect(3) = 8e-032
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = +1 / -3
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKP 351
TKDQFTN+K Q SS TF ATA SY+TGRPML+ PP R+AKP
Sbjct: 9567 TKDQFTNIKQIQ*AFCSSFSTFQATALSYETGRPMLERQIPPCRHAKP 9424
Score = 64.3 bits (134), Expect(3) = 8e-032
Identities = 31/50 (62%), Positives = 33/50 (66%)
Frame = +1 / -3
Query: 352 CCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAA 501
C II G S + F P SS IFSR +S A SVVSSMS PAW KVNTG A
Sbjct: 9267 C*IIWGNSEKRVFRPLSSNIFSRLISCNATSVVSSMSSPAWFEKVNTGIA 9118
Score = 60.2 bits (125), Expect(3) = 8e-032
Identities = 37/74 (50%), Positives = 40/74 (54%)
Frame = +1 / -2
Query: 607 L*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYCLAMAATLSRR* 786
L*LL I A VCASG P +C EG A ATL TD + TY AM AT S *
Sbjct: 7975 L*LLQIQ*ARVCASGVPSGDLSPACELRLEGESANATLWTDDIILRTYWRAMHATFSCI* 7796
Query: 787 FSYENWKAMVSTDL 828
SY N A+V TDL
Sbjct: 7795 LSYANSNAIVITDL 7754
Score = 52.4 bits (108), Expect(4) = 6e-074
Identities = 17/36 (47%), Positives = 29/36 (80%)
Frame = -1 / +3
Query: 608 RFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLK 501
R + G ELL+++T+ ++ LK+LW HSD+++CC+LK
Sbjct: 8622 RCYLGVELLKSNTEGKESVLKSLWHHSDAVLCCTLK 8729
>gb|AC170856.1| Medicago truncatula chromosome 2 clone mth2-13d14, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 101063
Score = 110 bits (234), Expect(4) = 1e-072
Identities = 42/74 (56%), Positives = 62/74 (83%)
Frame = -1 / -3
Query: 827 RSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSP 648
RSV+TIAF+F++E+H+++ VA+MARQYVR++++SVQRVA+A++PS + Q ++ G+P
Sbjct: 71682 RSVMTIAFEFAFESHMQDHVASMARQYVRSIISSVQRVALALSPSNLNSQGGLRTPLGTP 71503
Query: 647 EAHTLARWIGRSYR 606
EA TLARWI SYR
Sbjct: 71502 EAQTLARWISNSYR 71461
Score = 100 bits (212), Expect(4) = 1e-072
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = -1 / -1
Query: 506 LKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQ 351
L+A PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRK LC+E+P I+QQ
Sbjct: 70895 LQALPVFTFANQAGLDMLETTLVALQDIALEKIFDDHGRKILCSEFPLIIQQ 70740
Score = 97.7 bits (207), Expect(4) = 1e-072
Identities = 35/53 (66%), Positives = 46/53 (86%)
Frame = -1 / -3
Query: 362 IMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
++ QGFA L GG+C+SSMGRP+SYE+ VAWKVL++++ HC+ FMFVNWSFV*
Sbjct: 70578 LIWQGFACLQGGLCLSSMGRPISYERVVAWKVLNEEENAHCICFMFVNWSFV* 70420
Score = 73.9 bits (155), Expect(3) = 4e-033
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = +1 / +1
Query: 352 CCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQ 513
CCII G S F P SS IFS +S RA VVSSMS PAWLAKVNTG A + Q
Sbjct: 70741 CCIIRGNSEHRIFRPWSSNIFSNAISCRATKVVSSMSSPAWLAKVNTGNACKNQ 70902
Score = 69.3 bits (145), Expect(3) = 4e-033
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = +1 / +2
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCI 360
TKDQFTN+K Q SSS TF AT SY+ G PML+ PP R+AKPC I
Sbjct: 70424 TKDQFTNIKQIQ*AFSSSFSTFQATTLSYEIGLPMLERQRPP*RHAKPCQI 70576
Score = 56.1 bits (116), Expect(3) = 4e-033
Identities = 36/76 (47%), Positives = 41/76 (53%)
Frame = +1 / +2
Query: 604 NL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYCLAMAATLSRR 783
+L*LL I ASV ASG P C EG A ATL TD + TYC A+ AT S
Sbjct: 71459 HL*LLLIQRASV*ASGVPSGVLSPPCEFKLEGESANATLWTDDIMLRTYCRAIDATWSCI 71638
Query: 784 *FSYENWKAMVSTDLV 831
* S N A+V TDL+
Sbjct: 71639 *LSKANSNAIVITDLI 71686
Score = 50.6 bits (104), Expect(4) = 1e-072
Identities = 17/36 (47%), Positives = 29/36 (80%)
Frame = -1 / -1
Query: 608 RFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLK 501
R GAELL+++ + +++ LK+LW H+D+I+CC+LK
Sbjct: 71327 RCFLGAELLKSNNEGSESLLKSLWHHTDAILCCTLK 71220
>gb|AL375054.1|AL375054 MtBB11A08F1 MtBB Medicago truncatula cDNA clone MtBB11A08 T3, mRNA
sequence
Length = 492
Score = 197 bits (424), Expect(2) = 2e-072
Identities = 82/111 (73%), Positives = 93/111 (83%)
Frame = -1 / +1
Query: 833 NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPG 654
N RSVLTIAFQF++ENH R++VA+MARQYVR+VVASVQRVAMAIAPSR G QL K PG
Sbjct: 1 NLRSVLTIAFQFTFENHWRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPG 180
Query: 653 SPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLK 501
SPEAH LARWI RSYR HTGAEL R ++ +DA LK LW HSD+IMCCS+K
Sbjct: 181 SPEAHALARWISRSYRMHTGAELFRVESAASDAILKQLWHHSDAIMCCSVK 333
Score = 126 bits (269), Expect(2) = 3e-043
Identities = 66/109 (60%), Positives = 74/109 (67%)
Frame = +1 / -2
Query: 502 FREQHMIESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSC 681
F EQH+I SE C S F AS+ S +SSAPV L*LL IH A ASG+PG F S
Sbjct: 332 FTEQHIIASEWCQSCFSIASLAADSTLKSSAPVCIL*LLDIHRAKA*ASGEPGRDFGPS* 153
Query: 682 PPMREGAIAMATLCTDATTVLTYCLAMAATLSRR*FSYENWKAMVSTDL 828
P REGAIAMATL TDATT+ TY A+ ATLSR+*FS NW A+V TDL
Sbjct: 152 VPGREGAIAMATL*TDATTLRTYWRAIEATLSRQ*FSKVNWNAIVRTDL 6
Score = 97.7 bits (207), Expect(2) = 2e-072
Identities = 38/51 (74%), Positives = 47/51 (92%)
Frame = -1 / +1
Query: 500 AAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQG 348
A+P+FTF+NQAGLDMLETTL+ALQDI L+K+LD+ GRK LC+E+ KIMQQG
Sbjct: 340 ASPIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQG 492
Score = 71.2 bits (149), Expect(2) = 3e-043
Identities = 33/52 (63%), Positives = 35/52 (67%)
Frame = +1 / -2
Query: 349 PCCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAF 504
PCCIIL S Q FLP+SSR S +S RA VVSSMS PAW KVN G AF
Sbjct: 491 PCCIILENSEQRIFLPASSRTLSSIIS*RATRVVSSMSSPAWFEKVNIGDAF 336
>gb|AL382395.1|AL382395 MtBC06E08F1 MtBC Medicago truncatula cDNA clone MtBC06E08 T3, mRNA
sequence
Length = 481
Score = 174 bits (374), Expect(2) = 1e-066
Identities = 72/103 (69%), Positives = 83/103 (80%)
Frame = -1 / +3
Query: 809 AFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLA 630
AFQF++ENHLR++VA+MARQYVR+VVASVQRVAMAIAPSR G L K PGSPEAH LA
Sbjct: 3 AFQFTFENHLRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTXLGPKSLPGSPEAHALA 182
Query: 629 RWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLK 501
RWI R YR HTGA L R ++ +DA LK LW HS +IMCCS+K
Sbjct: 183 RWISRXYRMHTGAXLFRVESAXSDAILKQLWHHSXAIMCCSVK 311
Score = 110 bits (235), Expect(2) = 7e-039
Identities = 58/103 (56%), Positives = 65/103 (63%)
Frame = +1 / -1
Query: 502 FREQHMIESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSC 681
F EQH+I E C S F AS+ S +S APV L* L IH A ASG+PG F
Sbjct: 310 FTEQHIIAXEWCQSCFSIASLXADSTLKSXAPVCIL*XLDIHRAKA*ASGEPGRDFGPX* 131
Query: 682 PPMREGAIAMATLCTDATTVLTYCLAMAATLSRR*FSYENWKA 810
P REGAIAMATL TDATT+ TY A+ ATLSR+*FS NW A
Sbjct: 130 VPGREGAIAMATL*TDATTLRTYWRAIEATLSRK*FSKVNWNA 2
Score = 101 bits (215), Expect(2) = 1e-066
Identities = 39/53 (73%), Positives = 49/53 (92%)
Frame = -1 / +3
Query: 500 AAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFA 342
A+P+FTF+NQAGLDMLETTL+ALQDI L+K+LD+ GRK LC+E+ KIMQQG+A
Sbjct: 318 ASPIFTFSNQAGLDMLETTLVALQDIMLDKVLDEXGRKILCSEFSKIMQQGYA 476
Score = 72.1 bits (151), Expect(2) = 7e-039
Identities = 35/56 (62%), Positives = 36/56 (64%)
Frame = +1 / -1
Query: 337 RYAKPCCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAF 504
R A PCCIIL S Q FLP SSR S +S RA VVSSMS PAW KVN G AF
Sbjct: 481 RDA*PCCIILENSEQRIFLPXSSRTLSSIIS*RATRVVSSMSSPAWFEKVNXGDAF 314
>gb|BG450908.1|BG450908 NF095E08DT1F1065 Drought Medicago truncatula cDNA clone NF095E08DT
5', mRNA sequence
Length = 694
Score = 220 bits (475), Expect(2) = 6e-064
Identities = 82/119 (68%), Positives = 106/119 (89%)
Frame = -1 / -1
Query: 560 DASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKAL 381
++ LK+L HSD++ CCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD+G+K L
Sbjct: 571 ESILKSLXHHSDAVXCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTL 392
Query: 380 CTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
C E+P+IMQQGF + GG+C+SSMGRP++YE+AVAWKVL+++++ HC+ FMF+NWSFV*
Sbjct: 391 CXEFPQIMQQGFMCIQGGICLSSMGRPITYERAVAWKVLNEEESAHCICFMFINWSFV* 215
Score = 127 bits (272), Expect(2) = 2e-032
Identities = 63/110 (57%), Positives = 66/110 (60%)
Frame = +1 / +3
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQ N+K Q SSS TFHATA S G PMLD PP + KPCCII G S
Sbjct: 219 TKDQLMNIKQMQ*ADSSSFNTFHATALS*VIGLPMLDKQIPP*IHMKPCCIIWGNSXHRV 398
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECC 537
F P SS IFSR MS A VVSSMS PA A V TG AF+EQH SE C
Sbjct: 399 FFPLSSNIFSRVMS*SATRVVSSMSSPA*FANVKTGNAFKEQHXTASE*C 548
Score = 46.0 bits (94), Expect(2) = 6e-064
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -1 / -1
Query: 689 IGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTD 573
IG Q PG+ EA TL RWI S RF+ GAELL+ +
Sbjct: 694 IGXQNXFPLPPGTXEAQTLTRWICNSXRFYLGAELLKCE 578
Score = 33.6 bits (67), Expect(2) = 2e-032
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +1 / +3
Query: 586 SSAPVWNL*LLPIHLASVCASGDPG 660
+SAP NL LL IH SVCAS PG
Sbjct: 591 NSAPK*NLXLLQIHRVSVCASXVPG 665
>gb|BG448529.1|BG448529 NF036G02RT1F1017 Developing root Medicago truncatula cDNA clone
NF036G02RT 5', mRNA sequence
Length = 468
Score = 225 bits (486), Expect(2) = 4e-063
Identities = 86/119 (72%), Positives = 106/119 (89%)
Frame = -1 / +1
Query: 560 DASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKAL 381
++ LK+LW HSD+++CC+LKA PVFTF+NQAGLDMLETTL+ALQDISLEKI DD+GRK L
Sbjct: 91 ESVLKSLWHHSDAVLCCTLKAMPVFTFSNQAGLDMLETTLVALQDISLEKIFDDNGRKTL 270
Query: 380 CTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
+E+P+I+QQGFA L GG+C+SSMGRPVSYE+AVAWKVL+D+ HC+ FMFVNW FV*
Sbjct: 271 FSEFPQIIQQGFACLQGGICLSSMGRPVSYERAVAWKVLNDEQNAHCICFMFVNWXFV* 447
Score = 148 bits (317), Expect(2) = 9e-036
Identities = 68/111 (61%), Positives = 74/111 (66%)
Frame = +1 / -2
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TK QFTN+K Q SS TF ATA SY+TGRPML+ PP R+AKPC II G S +
Sbjct: 443 TKXQFTNIKQIQ*AFCSSFSTFQATALSYETGRPMLERQIPPCRHAKPC*IIWGNSEKRV 264
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCH 540
F P SS IFSR +S A SVVSSMS PAW KVNTG AFR QH SE CH
Sbjct: 263 FRPLSSNIFSRLISCNATSVVSSMSSPAWFEKVNTGIAFRVQHNTASEWCH 111
Score = 38.2 bits (77), Expect(2) = 4e-063
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -1 / +3
Query: 647 EAHTLARWIGRSYRFHTGAELLRTDT 570
EA TLA WI SYR + G ELL+++T
Sbjct: 3 EAQTLAHWICNSYRCYLGVELLKSNT 80
Score = 24.0 bits (46), Expect(2) = 9e-036
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1 / -3
Query: 586 SSAPVWNL*LLPIHLASVCAS 648
SS P +L*LL I A VCAS
Sbjct: 64 SSTPK*HL*LLQIQ*ARVCAS 2
>gb|AC138171.17| Medicago truncatula clone mth2-7f10, complete sequence
Length = 104336
Score = 104 bits (221), Expect(3) = 7e-057
Identities = 47/87 (54%), Positives = 63/87 (72%)
Frame = -1 / +2
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
T ++ S N R VLT+AFQF +E+ L+++VAAMARQYVR VV++VQ VA AI+PS +
Sbjct: 82091 TAHANGDASCPNNRCVLTVAFQFPFESGLQDNVAAMARQYVRRVVSAVQAVATAISPSSV 82270
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYR 606
K +PG+PEA TLA+WI +SYR
Sbjct: 82271 NTSGGAKLSPGTPEALTLAQWICQSYR 82351
Score = 90.9 bits (192), Expect(3) = 7e-057
Identities = 32/50 (64%), Positives = 43/50 (86%)
Frame = -1 / +2
Query: 353 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
QGFA +P G+C+S+MGR SY+QAVAWKV ++D++ HCLAF F+NWSF+*
Sbjct: 82934 QGFACMPAGICMSTMGRHASYDQAVAWKVHAEDNSVHCLAFSFINWSFI* 83083
Score = 84.5 bits (178), Expect(3) = 7e-057
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = -1 / +2
Query: 515 CCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQ 351
C L+ PVF FANQAGLDMLETTL+ALQDI+L+KI D+ RK L + K+MQQ
Sbjct: 82643 CLVLQQVPVFIFANQAGLDMLETTLVALQDITLDKIFDESARKNLIAYFAKLMQQ 82807
Score = 63.4 bits (132), Expect(4) = 9e-026
Identities = 40/76 (52%), Positives = 44/76 (57%)
Frame = +1 / -3
Query: 607 L*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYCLAMAATLSRR* 786
L*L IH ASV ASG PG F +G IA+AT CT TT TY AMAATLS R
Sbjct: 82350 L*LWQIH*ASVSASGVPGESFAPPEVLTLDGDIAVATACTAETTRRTY*RAMAATLSCRP 82171
Query: 787 FSYENWKAMVSTDLVL 834
S N KA V+T +L
Sbjct: 82170 LSKGN*KATVNTHRLL 82123
Score = 53.3 bits (110), Expect(4) = 9e-026
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = +1 / -3
Query: 352 CCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTG 495
CCI SS I S +S RA VVS+MSRPAWLAK+NTG
Sbjct: 82806 CCINFAKYAIKFLRADSSNILSSVISCRATRVVSNMSRPAWLAKMNTG 82663
Score = 52.8 bits (109), Expect(4) = 9e-026
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +1 / -3
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKP 351
H DQ N KA+Q + SS TFHATA SY+ RP++D P G A P
Sbjct: 83082 HINDQLMNEKAKQ*TLLSSACTFHATA*SYEACRPIVDMQIPAGIQANP 82936
Score = 29.5 bits (58), Expect(4) = 9e-026
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1 / -3
Query: 493 GAAFREQHMIESECCHSAFKEASVHWVSVRRSSAP 597
G F+EQH I S CH F S S S AP
Sbjct: 82557 GHTFKEQHKIASG*CHKCFSSISPIRESDLSSCAP 82453
>gb|AL382396.1|AL382396 MtBC06E08R1 MtBC Medicago truncatula cDNA clone MtBC06E08 T7, mRNA
sequence
Length = 526
Score = 199 bits (430), Expect(2) = 1e-052
Identities = 77/99 (77%), Positives = 91/99 (91%)
Frame = -1 / +1
Query: 500 AAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVC 321
A+P+FTF+NQAGLDMLETTL+ALQDI L+K+LD+ GRK LC+E+ KIMQQG+A LPGG+C
Sbjct: 40 ASPIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYASLPGGIC 219
Query: 320 VSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
VSSM RPVSYEQA+AWKVL+DDD HCLAFMF+NWSFV*
Sbjct: 220 VSSMNRPVSYEQAIAWKVLNDDDANHCLAFMFINWSFV* 336
Score = 138 bits (296), Expect = 1e-031
Identities = 66/99 (66%), Positives = 69/99 (69%)
Frame = +1 / -3
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQ NMKA+Q SSSLRTFHA ACS DTG MLDT PPGR A PCCIIL S Q
Sbjct: 332 TKDQLMNMKAKQ*LASSSLRTFHAMACS*DTGLFMLDTQIPPGRDA*PCCIILENSEQRI 153
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAF 504
FLP+SSR S +S RA VVSSMS PAW KVN G AF
Sbjct: 152 FLPASSRTLSSIIS*RATRVVSSMSSPAWFEKVNIGDAF 36
Score = 28.6 bits (56), Expect(2) = 1e-052
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -1 / +1
Query: 533 HSDSIMCCSLK 501
HSD+IMCCS+K
Sbjct: 1 HSDAIMCCSVK 33
>gb|AW690621.2|AW690621 NF036F01ST1F1000 Developing stem Medicago truncatula cDNA clone
NF036F01ST 5', mRNA sequence
Length = 425
Score = 207 bits (446), Expect = 2e-052
Identities = 80/137 (58%), Positives = 115/137 (83%)
Frame = -1 / +1
Query: 827 RSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSP 648
R+ +TIAF+F++E+H+++ VA+MARQYVR++++SVQRVA+A++PS + Q ++ G+P
Sbjct: 4 RAEMTIAFEFAFESHMQDHVASMARQYVRSIISSVQRVALALSPSNLNSQGGLRTPLGTP 183
Query: 647 EAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQA 468
EA TLARWI SYR GAELL+++ + +++ LK+LW H+D+I+CC+LKA PVFTFANQA
Sbjct: 184 EAQTLARWISNSYRCFLGAELLKSNNEGSESLLKSLWHHTDAILCCTLKALPVFTFANQA 363
Query: 467 GLDMLETTLIALQDISL 417
GLDMLETTL+ALQDI +
Sbjct: 364 GLDMLETTLVALQDIGI 414
Score = 106 bits (227), Expect = 4e-022
Identities = 65/131 (49%), Positives = 72/131 (54%)
Frame = +1 / -1
Query: 424 MSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVHWVSVRRSSAPVW 603
+S RA VVSSMS PAWLAKVNTG AFR Q I S CH S+ + SSAP
Sbjct: 407 ISCRATKVVSSMSSPAWLAKVNTGNAFRVQQSIASV*CHKDLSNDSLPSLLDLSSSAPKK 228
Query: 604 NL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYCLAMAATLSRR 783
+L*LL I ASV ASG P C EG A ATL TD + TYC A+ AT S
Sbjct: 227 HL*LLLIQRASV*ASGVPSGVLSPPCEFKLEGESANATLWTDDIMLRTYCRAIDATWSCI 48
Query: 784 *FSYENWKAMV 816
* S N A+V
Sbjct: 47 *LSKANSNAIV 15
>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence
Length = 112873
Score = 121 bits (259), Expect(3) = 5e-052
Identities = 50/95 (52%), Positives = 69/95 (72%)
Frame = -1 / +1
Query: 887 EVGSGXTTRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAM 708
EVG+ + + T+SV+TIAFQF++E HL++++AAMARQYVR++VASVQRV++
Sbjct: 44257 EVGTTGNKAGGDNSGHSGITKSVMTIAFQFAFEAHLQDNIAAMARQYVRSIVASVQRVSL 44436
Query: 707 AIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRF 603
A++PSR G Q PG+PEA TL RWI SYR+
Sbjct: 44437 ALSPSRFGSQNAFPLPPGTPEAQTLTRWICNSYRY 44541
Score = 101 bits (215), Expect(3) = 5e-052
Identities = 40/51 (78%), Positives = 48/51 (94%)
Frame = -1 / +2
Query: 503 KAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQ 351
+A PVFTFANQAGLDMLETTL+ALQDI+LEKI DD+G+K LC+E+P+IMQQ
Sbjct: 44897 QALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQ 45049
Score = 40.5 bits (82), Expect(3) = 5e-052
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = -1 / +1
Query: 563 TDASLKALWQHSDSIMCCSLK 501
+++ LK+LW HSD+++CCSLK
Sbjct: 44683 SESILKSLWHHSDAVLCCSLK 44745
>gb|BG645345.1|BG645345 EST506964 KV3 Medicago truncatula cDNA clone pKV3-39P8 5' end, mRNA
sequence
Length = 801
Score = 194 bits (419), Expect = 1e-048
Identities = 82/111 (73%), Positives = 93/111 (83%)
Frame = -1 / +2
Query: 833 NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPG 654
N RSVLTIAFQF++ENHLR++VA+MARQYVR+VVASVQRVAMAIAPSR G QL K PG
Sbjct: 455 NLRSVLTIAFQFTFENHLRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPG 634
Query: 653 SPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLK 501
SPEAH LARWI RSYR HTGAEL R ++ +DA LK LW HSD+IMC S+K
Sbjct: 635 SPEAHALARWISRSYRMHTGAELFRVESAASDAILKQLWHHSDAIMCWSVK 787
Score = 125 bits (268), Expect = 9e-028
Identities = 66/111 (59%), Positives = 75/111 (67%)
Frame = +1 / -1
Query: 502 FREQHMIESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSC 681
F +QH+I SE C S F AS+ S +SSAPV L*LL IH A ASG+PG F S
Sbjct: 786 FTDQHIIASEWCQSCFSIASLAADSTLKSSAPVCIL*LLDIHRAKA*ASGEPGRDFGPS* 607
Query: 682 PPMREGAIAMATLCTDATTVLTYCLAMAATLSRR*FSYENWKAMVSTDLVL 834
P REGAIAMATL TDATT+ TY A+ ATLSR+*FS NW A+V TDL L
Sbjct: 606 VPGREGAIAMATL*TDATTLRTYWRAIEATLSRK*FSKVNWNAIVRTDLRL 454
>gb|AL375055.1|AL375055 MtBB11A08R1 MtBB Medicago truncatula cDNA clone MtBB11A08 T7, mRNA
sequence
Length = 535
Score = 177 bits (382), Expect = 2e-043
Identities = 69/88 (78%), Positives = 80/88 (90%)
Frame = -1 / +1
Query: 467 GLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYE 288
GLDMLETTL+ALQDI L+K+LD+ GRK LC+E+ KIMQQG+A LPGG+CVSSM RPVSYE
Sbjct: 1 GLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYASLPGGICVSSMNRPVSYE 180
Query: 287 QAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
QA+AWKVL+DDD HCLAFMF+NWSFV*
Sbjct: 181 QAIAWKVLNDDDANHCLAFMFINWSFV* 264
Score = 116 bits (248), Expect = 5e-025
Identities = 57/85 (67%), Positives = 60/85 (70%)
Frame = +1 / -3
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQ NMKA+Q SSSLRTFHA ACS DTG MLDT PPGR A PCCIIL S Q
Sbjct: 260 TKDQLMNMKAKQ*LASSSLRTFHAMACS*DTGLFMLDTQIPPGRDA*PCCIILENSEQRI 81
Query: 388 FLPSSSRIFSREMSWRAISVVSSMS 462
FLP+SSR S +S RA VVSSMS
Sbjct: 80 FLPASSRTLSSIIS*RATRVVSSMS 6
>gb|AL385470.1|AL385470 MtBC28G06F1 MtBC Medicago truncatula cDNA clone MtBC28G06 T3, mRNA
sequence
Length = 426
Score = 171 bits (367), Expect = 2e-041
Identities = 66/136 (48%), Positives = 103/136 (75%)
Frame = -1 / +1
Query: 887 EVGSGXTTRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAM 708
++G A+ ++ RSV+TIAF+F++E+H+++ VA+MARQYVR++++SVQRVA+
Sbjct: 19 DIGPAGNKAANDCSGNSGCMRSVMTIAFEFAFESHMQDHVASMARQYVRSIISSVQRVAL 198
Query: 707 AIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHS 528
A++PS + Q ++ G+PEA TLARWI SYR GAELL+++ + +++ LK+LW H+
Sbjct: 199 ALSPSNLNSQGGLRTPLGTPEAQTLARWISNSYRCFLGAELLKSNNEGSESLLKSLWHHT 378
Query: 527 DSIMCCSLKAAPVFTF 480
D+I+CC+LKA PVFTF
Sbjct: 379 DAILCCTLKALPVFTF 426
>gb|CB894606.1|CB894606 EST647398 HOGA Medicago truncatula cDNA clone HOGA-31D6, mRNA
sequence
Length = 897
Score = 129 bits (277), Expect = 5e-029
Identities = 56/99 (56%), Positives = 75/99 (75%)
Frame = -1 / +1
Query: 878 SGXTTRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIA 699
S TT +D S+ NTRSVLTIAFQF +++ ++++V MARQYVR+V+ASVQRVAMAI+
Sbjct: 601 SPATTHGGADSSSSQNTRSVLTIAFQFPFDSTMQDNVVIMARQYVRSVIASVQRVAMAIS 780
Query: 698 PSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELL 582
PS I + K +PGSPEA TLA+WI +SY ++ G +LL
Sbjct: 781 PSGINPAVGAKLSPGSPEAVTLAQWICQSYSYYLGTDLL 897
>gb|AL385177.1|AL385177 MtBC26G12F1 MtBC Medicago truncatula cDNA clone MtBC26G12 T3, mRNA
sequence
Length = 408
Score = 122 bits (260), Expect = 1e-026
Identities = 47/91 (51%), Positives = 74/91 (81%)
Frame = -1 / +2
Query: 827 RSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSP 648
RSV+TIAF+F++E+H+++ VA+MARQYVR++++SVQRVA+A++PS + Q ++ G+P
Sbjct: 131 RSVMTIAFEFAFESHMQDHVASMARQYVRSIISSVQRVALALSPSNLNSQGGLRTPLGTP 310
Query: 647 EAHTLARWIGRSYRFHTGAELLRTDTQCTDA 555
EA TLARWI SYR GAELL+++ + +++
Sbjct: 311 EAQTLARWISNSYRCFLGAELLKSNNEGSES 403
>gb|BG453049.1|BG453049 NF091B08LF1F1062 Developing leaf Medicago truncatula cDNA clone
NF091B08LF 5', mRNA sequence
Length = 346
Score = 108 bits (230), Expect = 2e-022
Identities = 39/58 (67%), Positives = 51/58 (87%)
Frame = -1 / +1
Query: 377 TEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
+E+P I+QQGFA L GG+C+SSMGRP+SYE+ VAWKVL++++ HC+ FMFVNWSFV*
Sbjct: 1 SEFPLIIQQGFACLQGGLCLSSMGRPISYERVVAWKVLNEEENAHCICFMFVNWSFV* 174
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 836,058,365
Number of Sequences: 392609
Number of extensions: 11478627
Number of successful extensions: 50382
Number of sequences better than 1.0e-020: 21
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 30156200640
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)