TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521462.2.2
(1311 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula c... 342 e-111
gb|AC146572.11| Medicago truncatula clone mth2-104c10, comp... 138 1e-077
gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Med... 133 1e-053
gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula g... 138 8e-048
emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A1... 130 1e-046
gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula c... 185 2e-046
gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Med... 180 4e-045
gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula ... 170 7e-044
gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cD... 147 2e-035
gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved l... 143 3e-034
gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower M... 141 1e-033
emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17... 138 3e-031
emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A1... 138 3e-031
emb|CR501194.1| mth2-178J6RM1 BAC end, cultivar Jemalong A1... 130 4e-029
emb|CR487557.1| mth2-156M4RM1 BAC end, cultivar Jemalong A1... 125 2e-027
gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating ... 117 4e-025
>gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula cDNA clone MTUS-37D6, mRNA
sequence
Length = 813
Score = 342 bits (742), Expect(2) = e-111
Identities = 136/158 (86%), Positives = 144/158 (91%)
Frame = +1 / -3
Query: 556 LSNQVPYYDYALDLILDVESSHGDMLTEEQNELIESAAEMLYGLIHVRYIITSKGLSAML 735
LS+QVPYYDYALDLILDVESSHGDM TEEQNELIESAAEMLYG+IH RYI+TSKGL+AML
Sbjct: 679 LSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGLAAML 500
Query: 736 DKYRNVEFGRCPRVNCSGQPCLPVGQSDVPRSSTVKIYCPRCEDIYTPRSKYLSNIDGTY 915
DKY+N +FGRCPRV CSGQPCLPVGQSD+PRSSTVKIYCPRCEDIY PRSKY NIDG Y
Sbjct: 499 DKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAY 320
Query: 916 FGTTFPHLFLMTYPHLKPQKPLQQYVPRVFGFKIRKP* 1029
FGTTFPHL LMTY LKPQKP Q YVPRVFGFK+ KP*
Sbjct: 319 FGTTFPHLLLMTYGQLKPQKPSQNYVPRVFGFKLHKP* 206
Score = 165 bits (355), Expect(2) = 6e-046
Identities = 84/139 (60%), Positives = 88/139 (63%)
Frame = -2 / +3
Query: 1028 HGLRILNPNTLGTYCCSGFWGFKCGYVIRNKWGNVVPK*VPSMLLRYLDLGV*MSSHLGQ 849
+GL LNP TLGT C GF GF C VI N+ GNVVPK* PSML YLD G *MSSHLGQ
Sbjct: 207 YGL*SLNPKTLGT*FCDGFCGFSCP*VISNR*GNVVPK*APSMLP*YLDRG**MSSHLGQ 386
Query: 848 *IFTVLERGTSDCPTGRHGWPLQFTRGHLPNSTFLYLSSIADSPLLVIIYRT*INPXXXX 669
IFTVL+ G SD PTGR G P Q T GHLP S FLYLSS+A SPLLV I R *I P
Sbjct: 387 YIFTVLDLGMSDWPTGRQGCPEQ*TLGHLPKS*FLYLSSMAASPLLVNI*RA*IIP*SIS 566
Query: 668 XXXXXXXXXXXXXXSPWED 612
SPWED
Sbjct: 567 AADSINSFCSSVNMSPWED 623
Score = 148 bits (318), Expect(2) = 7e-041
Identities = 75/164 (45%), Positives = 100/164 (60%)
Frame = -1 / +2
Query: 1050 YIQPSNLSWLTDFEPKYPGNVLLQRLLGLQMRVCHQEQVGECCPKVSPVDVA*IFGSWSV 871
+I ++ WL FE K N++L L LQ+ + HQ+QV +C K+SPVDVA I G V
Sbjct: 185 HILSTSALWLMKFESKNSRNIVL*WFLWLQLSISHQQQVRKCSTKISPVDVALILGPRIV 364
Query: 870 DVFTSRAVNLHRT*TRNIRLPNRKAWLAAAIHSRASAELNVPVLIQHCGQPFTCNNIPNM 691
+VFT RA+ LH RN+ L N KA L+ A++S AS E+ V VL+QH Q F I M
Sbjct: 365 NVFTPRAIYLHSARPRNVGLANWKARLSGAVNSWASTEVIVLVLVQHGSQSFAGQYITGM 544
Query: 690 NQSIEHLSS*FNKFILLFCQHITMGRFNI*YQIKCIVIIWNLVA 559
N +I+HL *F+ IL +H+TMG NI IK I+II +L A
Sbjct: 545 NHTIKHLRC*FD*LILFLGKHVTMGGLNIQN*IKSIIIIRHLTA 676
Score = 143 bits (307), Expect(2) = 2e-035
Identities = 72/165 (43%), Positives = 97/165 (58%)
Frame = +3 / -2
Query: 558 KQPSSIL*LCT*SDIRC*IFPW*YVDRRAK*TY*ISC*DALWIDSCSVYYYK*RAVRNAG 737
+Q S++L*LC+* + C*+ PW*+V R K* IS DALW DSC +Y + R +AG
Sbjct: 677 EQSSALL*LCS*FNFGC*VLPW*HVYRGTK*VNRISSGDALWYDSCPLYIDQQRTGCHAG 498
Query: 738 *VQER*VRQMPSSELQRPTMPSCWAIGCSSFKYGEDLLP*M*RHLHSKIQISKQHRRDLL 917
VQE *+R MP S L R T+PS W + S + ED+LP +*RHL S +Q+S+QHRR L
Sbjct: 497 QVQEL*LR*MPKSLLLRTTLPSSWPVRHS*V*HCEDILPEV*RHLLSSVQVSRQHRRGLF 318
Query: 918 WDNIPPLVPDDIXXXXXXXXXXXIRSQGIWVQNP*AMTNLKVECI 1052
W I V DD+ + S+ W+Q *A+ EC+
Sbjct: 317 WYYISSPVADDLWTTEATETITELCSESFWIQTS*AIKLKLKECV 183
Score = 112 bits (239), Expect = 1e-023
Identities = 72/157 (45%), Positives = 86/157 (54%)
Frame = +2 / -1
Query: 557 *ATKFHIMTMHLI*Y*MLNLPMVIC*QKSKMNLLNQLLRCSMD*FMFGILLQVKGCPQCW 736
*A K IM M LI*+ ML+ PMV C ++KM+ NQ RC M *FM I K CW
Sbjct: 678 *AVKCLIMIMLLI*FWMLSPPMVTCLPRNKMS*SNQQRRCFMV*FMPVIY*PAKDWLPCW 499
Query: 737 ISTGTLSSADALE*IAAANHAFLLGNRMFLVQVR*RFTALDVKTSTLQDPNI*ATSTGLT 916
ST T++S DA E A N AF L + FL *R+ A VKT T+ P+I ATSTGL
Sbjct: 498 TSTRTMTSVDAQEFTAPDNLAFQLASPTFLGLAL*RYIARGVKTFTILGPSIKATSTGLI 319
Query: 917 LGQHSPTCS**HTRI*SPRSRCSNTFPGYLGSKSVSH 1027
L H TC ** *S R+ F +L S +SH
Sbjct: 318 LVLHFLTCC**LMDN*SHRNHHRTMFREFLDSNFISH 208
Score = 111 bits (237), Expect(2) = 3e-025
Identities = 54/120 (45%), Positives = 66/120 (55%)
Frame = -3 / +1
Query: 919 QSKSRRCCLDIWILECRCLHI*GSKSSPYLNEEHPIAQQEGMVGRCNSLEGICRTQRSCT 740
Q+K RRCCLD W + +CLH G+ SS E Q EG V R + L GI R+ SCT
Sbjct: 316 QNKPRRCCLDTWTEDSKCLHTSGNISSQC*T*ECRTGQLEGKVVRSSKLLGIYRSHSSCT 495
Query: 739 YPALRTALYL**YTEHESIHRASQQLIQ*VHFALLSTYHHGKIQHLISDQVHSHNMELGC 560
PA + L Y HES H+AS LI+ HF T HHG+ QH +Q H+HN L C
Sbjct: 496 CPAWQPVLCWSIYNGHESYHKASPLLIRLTHFVPR*TCHHGRTQHPKLNQEHNHNKALDC 675
Score = 80.8 bits (170), Expect(2) = e-111
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1 / -1
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLC 552
WISWFC+L+GNEFFCEVDDDYIQDDFNLC
Sbjct: 768 WISWFCNLRGNEFFCEVDDDYIQDDFNLC 682
Score = 41.4 bits (84), Expect(2) = 7e-041
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = -1 / +1
Query: 552 TEVEIILYVVIINLTEKFIAL*ATEP*NPRSIFPIRTTHI*FF 424
T++E+IL V+I+NLT++FI+ +P +PR I + +I F
Sbjct: 682 TQIEVILDVIIVNLTKEFISSQIAKPRDPRCIITVGNHYIRLF 810
Score = 41.4 bits (84), Expect(2) = 6e-046
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3 / +3
Query: 559 LAHRG*NHLVCSHHQPHRKIHCPLSYRTMKSTKYLPHQNHSHLIL 425
L H *+HL C+H QPH++IH + +T +S Y + H L
Sbjct: 675 LKHTD*SHLGCNHRQPHKRIHFLSNCKTTRSKMYHHRRKPLHQTL 809
Score = 28.1 bits (55), Expect(2) = 2e-035
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3 / -3
Query: 459 YFVDFMVL*LKGQ*IFL*G***LHTR*FQ 545
Y +D +VL + +*I L*G* *LH R* Q
Sbjct: 775 YILDLVVLQFERK*ILL*G*R*LHPR*LQ 689
Score = 25.8 bits (50), Expect(2) = 3e-025
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2 / +2
Query: 548 RLKXXXXXXXXXXXXXSLPFKLQNHEIHE 462
RLK S P KLQNHEI +
Sbjct: 686 RLKSSWM*SSSTSQKNSFPLKLQNHEIQD 772
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence
Length = 109548
Score = 138 bits (296), Expect(4) = 1e-077
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = +1 / +2
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSHGDML 633
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVESSHG +L
Sbjct: 86291 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGKLL 86458
Score = 129 bits (277), Expect(4) = 1e-077
Identities = 49/62 (79%), Positives = 54/62 (87%)
Frame = +1 / +1
Query: 733 LDKYRNVEFGRCPRVNCSGQPCLPVGQSDVPRSSTVKIYCPRCEDIYTPRSKYLSNIDGT 912
LDKY+N +FGRCPRV CSGQPCLPVGQSD+PRSSTVKIYCPRCEDIY PRSKY +I
Sbjct: 86788 LDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGSILIQ 86967
Query: 913 YF 918
Y+
Sbjct: 86968 YY 86973
Score = 91.3 bits (193), Expect(3) = 3e-028
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +1 / +1
Query: 886 KYLSNIDGTYFGTTFPHLFLMTYPHLKPQKPLQQYVPRVFGFKIRKP* 1029
K + +IDG YFGTTFPHL LMTY LKPQKP Q YVPRVFGFK+ KP*
Sbjct: 88144 KSVLDIDGAYFGTTFPHLLLMTYGQLKPQKPSQNYVPRVFGFKLHKP* 88287
Score = 83.1 bits (175), Expect(4) = 8e-043
Identities = 39/53 (73%), Positives = 40/53 (75%)
Frame = -2 / -2
Query: 890 YLDLGV*MSSHLGQ*IFTVLERGTSDCPTGRHGWPLQFTRGHLPNSTFLYLSS 732
YLD G *MSSHLGQ IFTVL+ G SD PTGR G P Q T GHLP S FLYLSS
Sbjct: 86945 YLDRG**MSSHLGQYIFTVLDLGMSDWPTGRQGCPEQ*TLGHLPKS*FLYLSS 86787
Score = 81.3 bits (171), Expect(4) = 8e-043
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = -3 / -2
Query: 646 FALLSTYHHGKIQHLISDQVHSHNMELGCLAHRG*NHLVCSHHQPHRKIHCPLSYRTMKS 467
F L+ +HG+ QH +Q H+HN L C H *+HL C+H QPH++IH + +T +S
Sbjct: 86471 FKKLAKAYHGRTQHPKLNQEHNHNKALDCSNHTD*SHLGCNHRQPHKRIHFLSNCKTTRS 86292
Query: 466 TKYLPHQNHSHLILRCQFLI 407
Y +NH H L C F I
Sbjct: 86291 KMYHHRRNH*HQTLHCPFQI 86232
Score = 79.4 bits (167), Expect(4) = 1e-077
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +1 / +3
Query: 622 GDMLTEEQNELIESAAEMLYGLIHVRYIITSKGLSAML 735
GDM TEEQNELIESAAEMLYG+IH RYI+TSKGL+AM+
Sbjct: 86589 GDMFTEEQNELIESAAEMLYGMIHARYILTSKGLAAMV 86702
Score = 71.6 bits (150), Expect(4) = 5e-027
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = -1 / -3
Query: 633 QHITMGRFNI*YQIKCIVIIWNLVA*PTEVEIILYVVIINLTEKFIAL*ATEP*NPRSIF 454
Q +TMG NI IK I+II +L A T++E+IL V+I+NLT++FI+ +P +PR I
Sbjct: 86458 QKLTMGGLNIQN*IKSIIIIRHLTAQTTQIEVILDVIIVNLTKEFISSQIAKPRDPRCII 86279
Query: 453 PIRTTHI*FFAVSF*F 406
+ TT+I F V F F
Sbjct: 86278 TVGTTNIRLFTVRFRF 86231
Score = 63.4 bits (132), Expect(3) = 3e-028
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +3 / +1
Query: 435 CEWF*WGRYFVDFMVL*LKGQ*IFL*G***LHTR*FQPLWAKQPSSIL*LCT*SDIRC*I 614
C WF Y +D +VL + +*I L*G* *LH R* Q +W +Q S++L*LC+* + C*+
Sbjct: 86260 C*WFRR**YILDLVVLQFERK*ILL*G*R*LHPR*LQSVWFEQSSALL*LCS*FNFGC*V 86439
Query: 615 FPW* 626
PW*
Sbjct: 86440 LPW* 86451
Score = 62.9 bits (131), Expect(4) = 8e-043
Identities = 28/43 (65%), Positives = 30/43 (69%)
Frame = -2 / -2
Query: 1028 HGLRILNPNTLGTYCCSGFWGFKCGYVIRNKWGNVVPK*VPSM 900
+GL LNP TLGT C GF GF C VI N+ GNVVPK* PSM
Sbjct: 88286 YGL*SLNPKTLGT*FCDGFCGFSCP*VISNR*GNVVPK*APSM 88158
Score = 53.8 bits (111), Expect(4) = 5e-027
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = -1 / -1
Query: 903 DVA*IFGSWSVDVFTSRAVNLHRT*TRNIRLPNRKAWLAAAIHSRASAELNVPVLIQ 733
D A I G V+VFT RA+ LH RN+ L N KA L+ A++S AS E+ V VL+Q
Sbjct: 86958 DTALILGPRIVNVFTPRAIYLHSARPRNVGLANWKARLSGAVNSWASTEVIVLVLVQ 86788
Score = 51.9 bits (107), Expect(4) = 5e-027
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -1 / -1
Query: 1026 WLTDFEPKYPGNVLLQRLLGLQMRVCHQEQVGECCPKVSPVDV 898
WL FE K N++L L LQ+ + HQ+QV +C K+SPVDV
Sbjct: 88284 WLMKFESKNSRNIVL*WFLWLQLSISHQQQVRKCSTKISPVDV 88156
Score = 33.1 bits (66), Expect(4) = 8e-043
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1 / -2
Query: 732 HCGQPFTCNNIPNMNQSIEHLSS*FNKFILLFCQHIT 622
H Q F I MN +I+HL *F+ IL +H+T
Sbjct: 86699 HGSQSFAGQYITGMNHTIKHLRC*FD*LILFLGKHVT 86589
Score = 30.4 bits (60), Expect(4) = 1e-077
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = +2 / +2
Query: 899 TSTGLTLGQHSPTCS**HTRI*SPRSRCSNTFPGYLGSKSVSH 1027
TSTGL L H TC ** *S R+ F +L S +SH
Sbjct: 88157 TSTGLILVLHFLTCC**LMDN*SHRNHHRTMFREFLDSNFISH 88285
Score = 30.4 bits (60), Expect(3) = 3e-028
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3 / +2
Query: 624 *YVDRRAK*TY*ISC*DALWIDSCSVY 704
*+V R K* IS DALW DSC +Y
Sbjct: 86591 *HVYRGTK*VNRISSGDALWYDSCPLY 86671
Score = 29.0 bits (57), Expect(4) = 5e-027
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3 / -1
Query: 703 YTEHESIHRASQQLIQ*VHFALLSTYH 623
Y HES H+AS LI+ HF T H
Sbjct: 86670 YNGHESYHKASPLLIRLTHFVPR*TCH 86590
>gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Medicago truncatula cDNA clone
NF020A01RT 5', mRNA sequence
Length = 390
Score = 133 bits (285), Expect(3) = 1e-053
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +1 / +3
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSH 621
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVESSH
Sbjct: 75 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSH 230
Score = 95.5 bits (202), Expect(3) = 4e-026
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = -3 / -1
Query: 622 HGKIQHLISDQVHSHNMELGCLAHRG*NHLVCSHHQPHRKIHCPLSYRTMKSTKYLPHQN 443
H +IQH S+Q H+H+ LGC H+G*+HL C+HHQPH++ H RTM+S HQN
Sbjct: 231 HERIQHPKSNQEHNHSKALGCSIHKG*SHLGCNHHQPHKRTHFL*DCRTMRSKMCPLHQN 52
Query: 442 HSHLILRCQF 413
HSHL L C F
Sbjct: 51 HSHLTLHCLF 22
Score = 68.0 bits (142), Expect(3) = 1e-053
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +1 / +3
Query: 637 EEQNELIESAAEMLYGLIHVRYIITSKGLSAM 732
EEQNELIESAAEMLYG+IH RYI+TSKG++AM
Sbjct: 231 EEQNELIESAAEMLYGMIHARYILTSKGMAAM 326
Score = 49.6 bits (102), Expect(3) = 1e-053
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 733 LDKYRNVEFGRCPRVNCSGQP 795
LDKY+N +FGRCPRV CSGQP
Sbjct: 328 LDKYKNYDFGRCPRVYCSGQP 390
Score = 31.3 bits (62), Expect(3) = 4e-026
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1 / -2
Query: 741 LIQHCGQPFTCNNIPNMNQSIEHLSS*FNKFIL 643
L +H F C + MN +I+HL FN +L
Sbjct: 335 LSRHSSHSFACQYVSRMNHTIKHLCCRFN*LVL 237
Score = 31.3 bits (62), Expect(3) = 4e-026
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -2 / -2
Query: 794 GWPLQFTRGHLPNSTFLYLS 735
G P Q T GHLP S FLYLS
Sbjct: 389 GCPEQ*TLGHLPKS*FLYLS 330
>gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula genomic clone 75B7, DNA sequence
Length = 906
Score = 138 bits (295), Expect(2) = 8e-048
Identities = 50/55 (90%), Positives = 55/55 (100%)
Frame = +1 / -2
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSHGDM 630
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVESSHG++
Sbjct: 524 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGEL 360
Score = 99.1 bits (210), Expect(2) = 2e-025
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = -3 / +2
Query: 625 HHGKIQHLISDQVHSHNMELGCLAHRG*NHLVCSHHQPHRKIHCPLSYRTMKSTKYLPHQ 446
HH +IQH S+Q H+H+ LGC H+G*+HL C+HHQPH++ H RTM+S HQ
Sbjct: 365 HHERIQHPKSNQEHNHSKALGCSIHKG*SHLGCNHHQPHKRTHFL*DCRTMRSKMCPLHQ 544
Query: 445 NHSHLILRCQF 413
NHSHL L C F
Sbjct: 545 NHSHLTLHCLF 577
Score = 78.5 bits (165), Expect(2) = 8e-048
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = +1 / -3
Query: 622 GDMLTEEQNELIESAAEMLYGLIHVRYIITSKGLSAML 735
GDM TEEQNELIESAAEMLYG+IH RYI+TSKG++AM+
Sbjct: 148 GDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMV 35
Score = 42.8 bits (87), Expect(2) = 2e-025
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1 / +2
Query: 732 HCGQPFTCNNIPNMNQSIEHLSS*FNKFILLFCQHIT 622
H F C + MN +I+HL FN +L C+HIT
Sbjct: 38 HSSHSFACQYVSRMNHTIKHLCCRFN*LVLFLCEHIT 148
>emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 624
Score = 130 bits (279), Expect(2) = 1e-046
Identities = 49/61 (80%), Positives = 54/61 (88%)
Frame = +1 / +1
Query: 733 LDKYRNVEFGRCPRVNCSGQPCLPVGQSDVPRSSTVKIYCPRCEDIYTPRSKYLSNIDGT 912
LDKY+N +FGRCPRV CSGQPCLPVGQSD+PRSSTVKIYCPRCED+Y PRSKY +I T
Sbjct: 289 LDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGSILMT 468
Query: 913 Y 915
Y
Sbjct: 469 Y 471
Score = 78.5 bits (165), Expect(2) = 1e-046
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = +1 / +2
Query: 622 GDMLTEEQNELIESAAEMLYGLIHVRYIITSKGLSAML 735
GDM TEEQNELIESAAEMLYG+IH RYI+TSKG++AM+
Sbjct: 92 GDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMV 205
>gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula cDNA clone MTYB854, mRNA
sequence
Length = 792
Score = 185 bits (398), Expect(2) = 2e-046
Identities = 72/90 (80%), Positives = 78/90 (86%)
Frame = +1 / +3
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSHGDMLTEEQ 645
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVESSHGDM TEEQ
Sbjct: 432 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQ 611
Query: 646 NELIESAAEMLYGLIHVRYIITSKGLSAML 735
NELIES AEMLYG+IH + L+ L
Sbjct: 612 NELIESVAEMLYGMIHAQEFTAPDNLAFQL 701
Score = 105 bits (223), Expect(2) = 7e-042
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1 / +2
Query: 757 FGRCPRVNCSGQPCLPVGQSDVPRSSTVKIYCPRCEDIYTPRSKY 891
+ CPRV CSGQPCLPVGQSD+PRSSTV+IYCPRCEDIY PRSKY
Sbjct: 650 YDSCPRVYCSGQPCLPVGQSDIPRSSTVRIYCPRCEDIYYPRSKY 784
Score = 101 bits (216), Expect(2) = 4e-033
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = -3 / -1
Query: 694 HESIHRASQQLIQ*VHFALLSTYHHGKIQHLISDQVHSHNMELGCLAHRG*NHLVCSHHQ 515
HES H+AS LI+ HF T HHG+ QH +Q H+HN L C H *+HL C+H Q
Sbjct: 660 HESYHKASPLLIRLTHFVPR*TCHHGRTQHPKLNQEHNHNKALDCSNHTD*SHLGCNHRQ 481
Query: 514 PHRKIHCPLSYRTMKSTKYLPHQNHSHLILRCQFLI 407
PH++IH + +T +S Y +NH H L C F I
Sbjct: 480 PHKRIHFLSNCKTTRSKMYHHRRNH*HQTLNCPFQI 373
Score = 88.1 bits (186), Expect(2) = 7e-042
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +3 / +2
Query: 435 CEWF*WGRYFVDFMVL*LKGQ*IFL*G***LHTR*FQPLWAKQPSSIL*LCT*SDIRC*I 614
C WF Y +D +VL + +*I L*G* *LH R* Q +W +Q S++L*LC+* + C*+
Sbjct: 401 C*WFRR**YILDLVVLQFERK*ILL*G*R*LHPR*LQSVWFEQSSALL*LCS*FNFGC*V 580
Query: 615 FPW*YVDRRAK*TY*ISC*DALWIDSCSVYY 707
PW*+V R K* IS DALW DSC Y
Sbjct: 581 LPW*HVYRGTK*VNRISSGDALWYDSCPRVY 673
Score = 62.0 bits (129), Expect(2) = 4e-033
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -2 / -1
Query: 890 YLDLGV*MSSHLGQ*IFTVLERGTSDCPTGRHGWPLQFTRGH 765
YLD G *MSSHLGQ I TVL+ G SD PTGR G P Q T GH
Sbjct: 783 YLDRG**MSSHLGQYILTVLDLGMSDWPTGRQGCPEQ*TLGH 658
Score = 26.7 bits (52), Expect(2) = 2e-046
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 253 IGEPMDRSSPSTSWGFSGGREK 318
+ + ++RSSPSTS +GG+++
Sbjct: 225 LDKQLERSSPSTSRTINGGKDR 290
>gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Medicago truncatula cDNA clone
NF089F06LF 5', mRNA sequence
Length = 638
Score = 180 bits (387), Expect(2) = 4e-045
Identities = 69/75 (92%), Positives = 73/75 (97%)
Frame = +1 / +3
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSHGDMLTEEQ 645
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVESSHGDM TEEQ
Sbjct: 414 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQ 593
Query: 646 NELIESAAEMLYGLI 690
NELIES AEMLYG+I
Sbjct: 594 NELIESXAEMLYGMI 638
Score = 26.7 bits (52), Expect(2) = 4e-045
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 253 IGEPMDRSSPSTSWGFSGGREK 318
+ + ++RSSPSTS +GG+++
Sbjct: 207 LDKQLERSSPSTSRTINGGKDR 272
>gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula cDNA clone mt--acc955211g03, mRNA
sequence
Length = 551
Score = 170 bits (365), Expect(2) = 7e-044
Identities = 66/78 (84%), Positives = 68/78 (87%)
Frame = +1 / +1
Query: 796 CLPVGQSDVPRSSTVKIYCPRCEDIYTPRSKYLSNIDGTYFGTTFPHLFLMTYPHLKPQK 975
CLPVGQSD+PRSSTVKIYCPRCEDIY PRSKY NIDG YFGTTFPHL LMTY LKPQK
Sbjct: 34 CLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLLLMTYGQLKPQK 213
Query: 976 PLQQYVPRVFGFKIRKP* 1029
P Q YVPRVFGFK+ KP*
Sbjct: 214 PSQNYVPRVFGFKLHKP* 267
Score = 111 bits (237), Expect = 3e-023
Identities = 53/77 (68%), Positives = 56/77 (72%)
Frame = -2 / -1
Query: 1028 HGLRILNPNTLGTYCCSGFWGFKCGYVIRNKWGNVVPK*VPSMLLRYLDLGV*MSSHLGQ 849
+GL LNP TLGT C GF GF C VI N+ GNVVPK* PSML YLD G *MSSHLGQ
Sbjct: 266 YGL*SLNPKTLGT*FCDGFCGFSCP*VISNR*GNVVPK*APSMLP*YLDRG**MSSHLGQ 87
Query: 848 *IFTVLERGTSDCPTGR 798
IFTVL+ G SD PTGR
Sbjct: 86 YIFTVLDLGMSDWPTGR 36
Score = 29.9 bits (59), Expect(2) = 7e-044
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 763 RCPRVNCSGQP 795
RCPRV CSGQP
Sbjct: 2 RCPRVYCSGQP 34
>gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cDNA clone pKV1-18I24, mRNA
sequence
Length = 566
Score = 147 bits (316), Expect(2) = 2e-035
Identities = 55/59 (93%), Positives = 58/59 (98%)
Frame = +1 / +2
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSHGDMLTEE 642
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVESSHGDM TEE
Sbjct: 389 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMCTEE 565
Score = 26.7 bits (52), Expect(2) = 2e-035
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1 / +2
Query: 253 IGEPMDRSSPSTSWGFSGGREK 318
+ + ++RSSPSTS +GG+++
Sbjct: 182 LDKQLERSSPSTSRTINGGKDR 247
>gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved leaf Medicago truncatula cDNA
clone NF091D01PL 5', mRNA sequence
Length = 582
Score = 143 bits (307), Expect(2) = 3e-034
Identities = 53/57 (92%), Positives = 56/57 (98%)
Frame = +1 / +3
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSHGDMLT 636
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVESSHGDM T
Sbjct: 411 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFT 581
Score = 26.7 bits (52), Expect(2) = 3e-034
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 253 IGEPMDRSSPSTSWGFSGGREK 318
+ + ++RSSPSTS +GG+++
Sbjct: 204 LDKQLERSSPSTSRTINGGKDR 269
>gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower Medicago truncatula cDNA clone
NF107D02FL 5', mRNA sequence
Length = 619
Score = 141 bits (303), Expect(2) = 1e-033
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +1 / +1
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSHGDMLT 636
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVES HGDM T
Sbjct: 430 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESXHGDMFT 600
Score = 26.7 bits (52), Expect(2) = 1e-033
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1 / +1
Query: 253 IGEPMDRSSPSTSWGFSGGREK 318
+ + ++RSSPSTS +GG+++
Sbjct: 223 LDKQLERSSPSTSRTINGGKDR 288
>emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 626
Score = 138 bits (295), Expect = 3e-031
Identities = 50/55 (90%), Positives = 55/55 (100%)
Frame = +1 / -2
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSHGDM 630
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVESSHG++
Sbjct: 457 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGEL 293
>emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 560
Score = 138 bits (295), Expect = 3e-031
Identities = 50/55 (90%), Positives = 55/55 (100%)
Frame = +1 / -2
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLILDVESSHGDM 630
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLILDVESSHG++
Sbjct: 289 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGEL 125
>emb|CR501194.1| mth2-178J6RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 805
Score = 130 bits (279), Expect = 4e-029
Identities = 49/61 (80%), Positives = 54/61 (88%)
Frame = +1 / +2
Query: 733 LDKYRNVEFGRCPRVNCSGQPCLPVGQSDVPRSSTVKIYCPRCEDIYTPRSKYLSNIDGT 912
LDKY+N +FGRCPRV CSGQPCLPVGQSD+PRSSTVKIYCPRCED+Y PRSKY +I T
Sbjct: 50 LDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGSILMT 229
Query: 913 Y 915
Y
Sbjct: 230 Y 232
>emb|CR487557.1| mth2-156M4RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 165
Score = 125 bits (267), Expect = 2e-027
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +1 / +3
Query: 736 DKYRNVEFGRCPRVNCSGQPCLPVGQSDVPRSSTVKIYCPRCEDIYTPRSKY 891
DKY+N +FGRCPRV CSGQPCLPVGQSD+PRSSTVKIYCPRCED+Y PRSKY
Sbjct: 3 DKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKY 158
>gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 620
Score = 117 bits (250), Expect = 4e-025
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +1 / +1
Query: 466 WISWFCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYALDLI 600
WISWFC+L+GNEFFCEVDDDYIQDDFNLCGLS+QVPYYDYALDLI
Sbjct: 484 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLI 618
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,211,865,261
Number of Sequences: 392609
Number of extensions: 17256390
Number of successful extensions: 69374
Number of sequences better than 1.0e-020: 18
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 47598126260
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)