TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493751.2.1
(577 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC149641.1| Medicago truncatula chromosome 7 clone mth2-... 86 1e-029
gb|AC149579.11| Medicago truncatula clone mth2-99d8, comple... 86 1e-029
gb|CG943706.1|CG943706 MBEFP90TR mth2 Medicago truncatula g... 86 2e-029
gb|AC161031.11| Medicago truncatula clone mth2-65j10, WORKI... 84 3e-029
gb|AC146562.17| Medicago truncatula clone mth2-14d10, compl... 117 2e-028
emb|CR498056.1| mth2-174E12FM1 BAC end, cultivar Jemalong A... 73 1e-025
gb|AJ498519.1|AJ498519 AJ498519 MTPOSE Medicago truncatula ... 78 3e-025
emb|CR936328.1| Medicago truncatula chromosome 5 clone mth4... 80 7e-025
gb|AC137995.31| Medicago truncatula clone mth2-11j1, comple... 80 7e-025
gb|BF520734.1|BF520734 EST458207 DSIL Medicago truncatula c... 80 9e-025
gb|AC150204.20| Medicago truncatula clone mth2-69i3, WORKIN... 100 1e-024
emb|CR344839.1| mte1-78J7FM1 BAC end, cultivar Jemalong A17... 78 2e-024
emb|CR494458.1| mth2-168I11FM1 BAC end, cultivar Jemalong A... 79 4e-024
emb|CR482269.1| mth2-146C21FM1 BAC end, cultivar Jemalong A... 79 4e-024
gb|CA921855.1|CA921855 EST639573 MTUS Medicago truncatula c... 79 5e-024
gb|BQ148692.1|BQ148692 NF080E03FL1F1023 Developing flower M... 79 5e-024
gb|AC152919.12| Medicago truncatula clone mth2-21g11, WORKI... 73 9e-024
gb|AC144539.7| Medicago truncatula clone mth2-11o10, comple... 96 6e-023
gb|AC149491.2| Medicago truncatula chromosome 2 BAC clone m... 96 6e-023
gb|BG588681.1|BG588681 EST490490 MHRP- Medicago truncatula ... 96 7e-023
gb|BF644711.1|BF644711 NF019E05EC1F1038 Elicited cell cultu... 96 7e-023
gb|BQ750414.1|BQ750414 EST633150 KVKC Medicago truncatula c... 79 4e-022
gb|CX528976.1|CX528976 s13dNF26A12MJ085_244012 Methyl Jasmo... 80 4e-022
emb|CR349799.1| mte1-84D9FM1 BAC end, cultivar Jemalong A17... 65 6e-022
gb|BQ124114.1|BQ124114 EST609690 GLSD Medicago truncatula c... 73 8e-022
gb|BI273133.1|BI273133 NF092D11FL1F1093 Developing flower M... 73 8e-022
gb|BQ124200.1|BQ124200 EST609776 GLSD Medicago truncatula c... 73 8e-022
gb|AC171266.11| Medicago truncatula clone mth2-14o4, WORKIN... 55 2e-021
gb|AC136841.25| Medicago truncatula clone mth2-14n9, WORKIN... 55 2e-021
gb|AC166147.8| Medicago truncatula clone mth2-145g3, comple... 71 2e-021
gb|AC168149.7| Medicago truncatula clone mth2-84g4, complet... 71 2e-021
gb|AC149127.6| Medicago truncatula clone mth2-108o17, compl... 71 2e-021
gb|CG931405.1|CG931405 MBEII75TF mth2 Medicago truncatula g... 71 2e-021
gb|CG925742.1|CG925742 MBECQ83TR mth2 Medicago truncatula g... 71 2e-021
>gb|AC149641.1| Medicago truncatula chromosome 7 clone mth2-55l11, *** SEQUENCING IN
PROGRESS ***, 3 ordered pieces
Length = 117197
Score = 86.3 bits (182), Expect(3) = 1e-029
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +2 / +3
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
AT +NA YN + +R + GTP RPK V V++F L++E+ KPGP ERHFG+F DG
Sbjct: 33885 ATVKNAKTYNKNMRKRLLKRKGTPHRPKMLVRVYIFALFNENLKPGPGSERHFGLFNHDG 34064
Query: 407 SKAYDINF 430
S AYDI F
Sbjct: 34065 SIAYDIGF 34088
Score = 46.9 bits (96), Expect(3) = 1e-029
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2 / +3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+FDA VDA ALEK GF + V+ETGW + G
Sbjct: 33750 LHYDNMFDAQVDAAYFALEKFGFDKMEVIVSETGWASHG 33866
Score = 35.0 bits (70), Expect(3) = 1e-029
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / +3
Query: 5 AYPFISHVNDPANVQLAYALF 67
AYPF+++ NDP ++ + YALF
Sbjct: 33651 AYPFLAYKNDPQHIDINYALF 33713
>gb|AC149579.11| Medicago truncatula clone mth2-99d8, complete sequence
Length = 111010
Score = 86.3 bits (182), Expect(3) = 1e-029
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +2 / -2
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
AT +NA YN + +R + GTP RPK V V++F L++E+ KPGP ERHFG+F DG
Sbjct: 76944 ATVKNAKTYNKNMRKRLLKRKGTPHRPKMLVRVYIFALFNENLKPGPGSERHFGLFNHDG 76765
Query: 407 SKAYDINF 430
S AYDI F
Sbjct: 76764 SIAYDIGF 76741
Score = 46.9 bits (96), Expect(3) = 1e-029
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2 / -2
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+FDA VDA ALEK GF + V+ETGW + G
Sbjct: 77079 LHYDNMFDAQVDAAYFALEKFGFDKMEVIVSETGWASHG 76963
Score = 35.0 bits (70), Expect(3) = 1e-029
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / -2
Query: 5 AYPFISHVNDPANVQLAYALF 67
AYPF+++ NDP ++ + YALF
Sbjct: 77178 AYPFLAYKNDPQHIDINYALF 77116
>gb|CG943706.1|CG943706 MBEFP90TR mth2 Medicago truncatula genomic clone 45P12, DNA
sequence
Length = 920
Score = 86.3 bits (182), Expect(3) = 2e-029
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +2 / +3
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
AT +NA YN + +R + GTP RPK V V++F L++E+ KPGP ERHFG+F DG
Sbjct: 438 ATVKNAKTYNKNMRKRLLKRKGTPHRPKMLVRVYIFALFNENLKPGPGSERHFGLFNHDG 617
Query: 407 SKAYDINF 430
S AYDI F
Sbjct: 618 SIAYDIGF 641
Score = 46.9 bits (96), Expect(3) = 2e-029
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2 / +3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+FDA VDA ALEK GF + V+ETGW + G
Sbjct: 303 LHYDNMFDAQVDAAYFALEKFGFDKMEVIVSETGWASHG 419
Score = 35.0 bits (70), Expect(3) = 2e-029
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / +3
Query: 5 AYPFISHVNDPANVQLAYALF 67
AYPF+++ NDP ++ + YALF
Sbjct: 204 AYPFLAYKNDPQHIDINYALF 266
>gb|AC161031.11| Medicago truncatula clone mth2-65j10, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 102134
Score = 83.5 bits (176), Expect(3) = 3e-029
Identities = 30/68 (44%), Positives = 48/68 (70%)
Frame = +2 / -1
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
A NA YN + +R A+ GTP RPK+ ++ ++F +++ED KPGP ER++G+F+ADG
Sbjct: 90332 ANVTNARTYNYNLRKRLAKKKGTPHRPKDVLKAYIFAIFNEDSKPGPTSERNYGLFKADG 90153
Query: 407 SKAYDINF 430
S +Y++ F
Sbjct: 90152 SISYNVGF 90129
Score = 48.3 bits (99), Expect(3) = 3e-029
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +2 / -1
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNAT 247
L Y N+ DA +DA ALE GF + VTETGW +AG N T
Sbjct: 90467 LHYDNMLDAQIDAAYTALEDAGFHKMEVIVTETGWASAGDQNEVGANVT 90321
Score = 35.4 bits (71), Expect(3) = 3e-029
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2 / -1
Query: 5 AYPFISHVNDPANVQLAYALF 67
AYPF+ ++ DP N+ + YALF
Sbjct: 90566 AYPFLVYIGDPENIDINYALF 90504
>gb|AC146562.17| Medicago truncatula clone mth2-14d10, complete sequence
Length = 118505
Score = 117 bits (250), Expect(2) = 2e-028
Identities = 47/106 (44%), Positives = 68/106 (64%)
Frame = +2 / -1
Query: 92 DGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKIVE 271
+ A+ Y NLFDA +D++ AALEK G V V+E+GWP+AG AT +NA Y + ++
Sbjct: 29054 NNAVGYQNLFDAQLDSVYAALEKVGGSSVKIVVSESGWPSAGGDVATIENARTYYSNLIN 28875
Query: 272 RPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGS 409
G GTP RP + +E +LF ++DE+ KPG E+HFG+F G+
Sbjct: 28874 HANSGNGTPLRPGQAIETYLFAMFDENQKPGAATEQHFGLFNPVGT 28737
Score = 89.0 bits (188), Expect(2) = 1e-027
Identities = 37/93 (39%), Positives = 57/93 (61%)
Frame = +2 / +2
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
Y + S+++D ++ L++ALF + V DG Y NLFDAT+ AL AALEK G +
Sbjct: 64169 YTYFSYISDTKDIDLSFALFTSTTIKVHDGQYAYQNLFDATLGALYAALEKIGGANLEVV 64348
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+ G AA+ +NA Y+ +++ G
Sbjct: 64349 VSESGWPSDGGVAASIENAQIYHENLIKHVITG 64447
Score = 54.7 bits (113), Expect(2) = 1e-027
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2 / +2
Query: 290 GTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDI 424
GTP RP + +E +LF ++DE+ K E ERH+G+F D Y I
Sbjct: 64445 GTPNRPNQALETYLFAMFDENNKGPDETERHYGLFTPDKQIKYQI 64579
Score = 29.0 bits (57), Expect(2) = 2e-028
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 8 YPFISHVNDPANVQLAYALF 67
+P+ +++ DP N+ L +ALF
Sbjct: 29126 HPYFAYIGDPQNIPLDFALF 29067
>emb|CR498056.1| mth2-174E12FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 624
Score = 73.5 bits (154), Expect(3) = 1e-025
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +2 / +2
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
AT +NA YN + +R + GTP RPK V V++F L++E+ KPGP ERHFG+F DG
Sbjct: 443 ATVKNAKTYNKNMRKRLLKRKGTPHRPKMLVRVYIFALFNENLKPGPGSERHFGLFNHDG 622
Score = 46.9 bits (96), Expect(3) = 1e-025
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2 / +2
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+FDA VDA ALEK GF + V+ETGW + G
Sbjct: 308 LHYDNMFDAQVDAAYFALEKFGFDKMEVIVSETGWASHG 424
Score = 35.0 bits (70), Expect(3) = 1e-025
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / +2
Query: 5 AYPFISHVNDPANVQLAYALF 67
AYPF+++ NDP ++ + YALF
Sbjct: 209 AYPFLAYKNDPQHIDINYALF 271
>gb|AJ498519.1|AJ498519 AJ498519 MTPOSE Medicago truncatula cDNA clone mt--acc955205f10,
mRNA sequence
Length = 691
Score = 78.0 bits (164), Expect(3) = 3e-025
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = +2 / +3
Query: 236 QNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKA 415
+NA AYN ++ VGTP P ++V+ ++F LYDED KPGP ER FG+F+ D S +
Sbjct: 285 ENAKAYNGNLITHLRSLVGTPLIPGKSVDTYIFALYDEDLKPGPGSERAFGLFKTDLSMS 464
Query: 416 YDINFA 433
YDI A
Sbjct: 465 YDIGLA 482
Score = 48.7 bits (100), Expect(3) = 3e-025
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2 / +3
Query: 104 VYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
+YTN+FDA VDA+ +AL + + V ETGWP++G
Sbjct: 144 LYTNMFDAQVDAVHSALSAMSYEDIEIVVAETGWPSSG 257
Score = 26.7 bits (52), Expect(3) = 3e-025
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDG 97
YPF ++ +DP L + LF + V G
Sbjct: 45 YPFFAYQSDPRPETLTFCLFQPNSGRVDSG 134
>emb|CR936328.1| Medicago truncatula chromosome 5 clone mth4-1f18, COMPLETE SEQUENCE
Length = 194592
Score = 79.9 bits (168), Expect(3) = 7e-025
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +2 / -3
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
A+ +NA AYNA +V + GTP RPK + VFLF L++E+ KPGP ER+FG+F D
Sbjct: 41728 ASVENAAAYNANLVRKILTSKGTPLRPKADLTVFLFALFNENQKPGPTSERNFGLFYPDE 41549
Query: 407 SKAYDI 424
K Y++
Sbjct: 41548 KKVYNV 41531
Score = 48.3 bits (99), Expect(3) = 7e-025
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2 / -3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y NLFDA +DA+ AAL + + + V+ETGWP+ G
Sbjct: 41863 LRYLNLFDAQIDAVFAALSRLKYDDINVVVSETGWPSKG 41747
Score = 24.0 bits (46), Expect(3) = 7e-025
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2 / -3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDG 97
YPF ++ ++ + L YALF V G
Sbjct: 41959 YPFFAYESNADVISLDYALFRENPGQVDAG 41870
>gb|AC137995.31| Medicago truncatula clone mth2-11j1, complete sequence
Length = 146749
Score = 79.9 bits (168), Expect(3) = 7e-025
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +2 / -3
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
A+ +NA AYNA +V + GTP RPK + VFLF L++E+ KPGP ER+FG+F D
Sbjct: 130025 ASVENAAAYNANLVRKILTSKGTPLRPKADLTVFLFALFNENQKPGPTSERNFGLFYPDE 129846
Query: 407 SKAYDI 424
K Y++
Sbjct: 129845 KKVYNV 129828
Score = 48.3 bits (99), Expect(3) = 7e-025
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2 / -3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y NLFDA +DA+ AAL + + + V+ETGWP+ G
Sbjct: 130160 LRYLNLFDAQIDAVFAALSRLKYDDINVVVSETGWPSKG 130044
Score = 24.0 bits (46), Expect(3) = 7e-025
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2 / -3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDG 97
YPF ++ ++ + L YALF V G
Sbjct: 130256 YPFFAYESNADVISLDYALFRENPGQVDAG 130167
>gb|BF520734.1|BF520734 EST458207 DSIL Medicago truncatula cDNA clone pDSIL-39A20, mRNA
sequence
Length = 647
Score = 79.9 bits (168), Expect(3) = 9e-025
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +2 / +3
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
A+ +NA AYNA +V + GTP RPK + VFLF L++E+ KPGP ER+FG+F D
Sbjct: 366 ASVENAAAYNANLVRKILTSKGTPLRPKADLTVFLFALFNENQKPGPTSERNFGLFYPDE 545
Query: 407 SKAYDI 424
K Y++
Sbjct: 546 KKVYNV 563
Score = 48.3 bits (99), Expect(3) = 9e-025
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2 / +3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y NLFDA +DA+ AAL + + + V+ETGWP+ G
Sbjct: 231 LRYLNLFDAQIDAVFAALSRLKYDDINVVVSETGWPSKG 347
Score = 24.0 bits (46), Expect(3) = 9e-025
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDG 97
YPF ++ ++ + L YALF V G
Sbjct: 135 YPFFAYESNADVISLDYALFRENPGQVDAG 224
>gb|AC150204.20| Medicago truncatula clone mth2-69i3, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 113429
Score = 100 bits (213), Expect(2) = 1e-024
Identities = 41/89 (46%), Positives = 55/89 (61%)
Frame = +2 / +2
Query: 41 NVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGH 220
N +A F AAPV DG++ YTN+FDA D L++ALEK GFG + + E GWPT G
Sbjct: 57395 NFPKEFAFFDGSAAPVVDGSITYTNVFDANFDTLISALEKNGFGSMNVIIGEVGWPTDGT 57574
Query: 221 PAATPQNATAYNAKIVERPARGVGTPKRP 307
A ++A +N +V+R + GTPKRP
Sbjct: 57575 SNANIKSAQRFNQGLVDRIVKKQGTPKRP 57661
Score = 33.6 bits (67), Expect(2) = 1e-024
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 371 FERHFGIFRADGSKAYDIN 427
FERH+GIF DGS Y +N
Sbjct: 57728 FERHWGIFNFDGSMKYPLN 57784
>emb|CR344839.1| mte1-78J7FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 701
Score = 77.6 bits (163), Expect(3) = 2e-024
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2 / +1
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
A+PQNA YN +++R GTP P+ +EV+LF L++ED KPGP ER++G+FR D
Sbjct: 517 ASPQNAATYNRNLLKRQMANQGTPLNPRMRLEVYLFALFNEDLKPGPTSERNYGLFRPDE 696
Query: 407 S 409
S
Sbjct: 697 S 699
Score = 45.1 bits (92), Expect(3) = 2e-024
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2 / +1
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHP 223
L Y N+ A DA+ ++ K GF G+ V+ETGWP+ G P
Sbjct: 382 LHYDNMLYAMADAVSFSIAKMGFKGIEVRVSETGWPSRGDP 504
Score = 28.6 bits (56), Expect(3) = 2e-024
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 5 AYPFISHVNDPANVQLAYALF 67
AYP+ ++ +DP ++ L Y LF
Sbjct: 283 AYPYFAYKDDPDSIPLDYVLF 345
>emb|CR494458.1| mth2-168I11FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 726
Score = 78.5 bits (165), Expect(3) = 4e-024
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +2 / +3
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
ATPQNA YN ++ R GTP +P ++V++F L++ED KPGP ER++G++ DG
Sbjct: 399 ATPQNAKLYNGNLLRRIEEKQGTPGKPLVPIDVYVFALFNEDLKPGPASERNYGLYYPDG 578
Query: 407 SKAYDI 424
S Y+I
Sbjct: 579 SPVYNI 596
Score = 41.4 bits (84), Expect(3) = 4e-024
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2 / +3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+ A +DA+ AA++ G+ V V+ETGWP+ G
Sbjct: 264 LHYDNMLYAQIDAVYAAIKVIGYTNVEVKVSETGWPSNG 380
Score = 29.9 bits (59), Expect(3) = 4e-024
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 5 AYPFISHVNDPANVQLAYALF 67
AYPF ++ ++P V L YALF
Sbjct: 165 AYPFFAYKDNPNEVSLNYALF 227
>emb|CR482269.1| mth2-146C21FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 654
Score = 78.5 bits (165), Expect(3) = 4e-024
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +2 / +3
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
ATPQNA YN ++ R GTP +P ++V++F L++ED KPGP ER++G++ DG
Sbjct: 399 ATPQNAKLYNGNLLRRIEEKQGTPGKPLVPIDVYVFALFNEDLKPGPASERNYGLYYPDG 578
Query: 407 SKAYDI 424
S Y+I
Sbjct: 579 SPVYNI 596
Score = 41.4 bits (84), Expect(3) = 4e-024
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2 / +3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+ A +DA+ AA++ G+ V V+ETGWP+ G
Sbjct: 264 LHYDNMLYAQIDAVYAAIKVIGYTNVEVKVSETGWPSNG 380
Score = 29.9 bits (59), Expect(3) = 4e-024
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 5 AYPFISHVNDPANVQLAYALF 67
AYPF ++ ++P V L YALF
Sbjct: 165 AYPFFAYKDNPNEVSLNYALF 227
>gb|CA921855.1|CA921855 EST639573 MTUS Medicago truncatula cDNA clone MTUS-45C4, mRNA
sequence
Length = 743
Score = 79.0 bits (166), Expect(3) = 5e-024
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +2 / -3
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
A+PQNA AYN +V++ GTP RP + V+LF L++E+GK G ER+FG+F D
Sbjct: 462 ASPQNAAAYNGNLVKKILNNGGTPLRPNANLTVYLFALFNENGKVGLTSERNFGMFYPDM 283
Query: 407 SKAYDINF 430
K YD+ F
Sbjct: 282 KKVYDVPF 259
Score = 46.4 bits (95), Expect(3) = 5e-024
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2 / -3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+FDA +DA+ AAL + V V+ETGWP+ G
Sbjct: 597 LKYYNIFDAQIDAVFAALNVLQYDDVRVVVSETGWPSKG 481
Score = 24.0 bits (46), Expect(3) = 5e-024
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2 / -3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDG 97
YPF ++ ++ + L YALF V G
Sbjct: 693 YPFFAYESNADVISLNYALFRENPGNVDPG 604
>gb|BQ148692.1|BQ148692 NF080E03FL1F1023 Developing flower Medicago truncatula cDNA clone
NF080E03FL 5', mRNA sequence
Length = 616
Score = 79.0 bits (166), Expect(3) = 5e-024
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +2 / +3
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
A+PQNA AYN +V++ GTP RP + V+LF L++E+GK G ER+FG+F D
Sbjct: 237 ASPQNAAAYNGNLVKKILNNGGTPLRPNANLTVYLFALFNENGKVGLTSERNFGMFYPDM 416
Query: 407 SKAYDINF 430
K YD+ F
Sbjct: 417 KKVYDVPF 440
Score = 46.4 bits (95), Expect(3) = 5e-024
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2 / +3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+FDA +DA+ AAL + V V+ETGWP+ G
Sbjct: 102 LKYYNIFDAQIDAVFAALNVLQYDDVRVVVSETGWPSKG 218
Score = 24.0 bits (46), Expect(3) = 5e-024
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDG 97
YPF ++ ++ + L YALF V G
Sbjct: 6 YPFFAYESNADVISLNYALFRENPGNVDPG 95
>gb|AC152919.12| Medicago truncatula clone mth2-21g11, WORKING DRAFT SEQUENCE, 13
unordered pieces
Length = 167594
Score = 72.5 bits (152), Expect(3) = 9e-024
Identities = 26/69 (37%), Positives = 44/69 (63%)
Frame = +2 / +3
Query: 224 AATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRAD 403
AATP NA YN ++ GTP + + ++V++F L++E+ KPG E ER++G+F D
Sbjct: 34791 AATPDNAQTYNTNLIRHVINNTGTPAKLGQELDVYIFSLFNENRKPGLESERNWGLFYPD 34970
Query: 404 GSKAYDINF 430
+ Y+++F
Sbjct: 34971 QTSVYNLDF 34997
Score = 53.3 bits (110), Expect(3) = 9e-024
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2 / +3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHP 223
L+YTN+FDA +DA+ AL F + VTETGWP+ G P
Sbjct: 34659 LLYTNMFDAQIDAIYYALMALNFRTIKVMVTETGWPSKGSP 34781
Score = 22.6 bits (43), Expect(3) = 9e-024
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGA 79
YP+ ++ + V L YALF A +
Sbjct: 34563 YPYYAYRDSRNKVSLDYALFQASS 34634
>gb|AC144539.7| Medicago truncatula clone mth2-11o10, complete sequence
Length = 113167
Score = 95.9 bits (203), Expect(2) = 6e-023
Identities = 43/110 (39%), Positives = 60/110 (54%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ SHV +P ++ L YALF + VQDG Y NLFDA +D++ AAL+ G G V
Sbjct: 98418 YPYFSHVGNPRDISLPYALFTSPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVV 98597
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFD 337
V+E+GWP+ G A + NA Y ++ +G ET +FD
Sbjct: 98598 VSESGWPSDGGAATSYDNARIYLDNLIRHVGKGTPRRPWATETYIFAMFD 98747
Score = 32.2 bits (64), Expect(2) = 6e-023
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2 / +3
Query: 347 EDGKPGPEFERHFGIFRADGSKAYDINF 430
++ + PE E+HFG+F + K Y F
Sbjct: 98745 DENQKSPELEKHFGVFYPNKQKKYPFGF 98828
>gb|AC149491.2| Medicago truncatula chromosome 2 BAC clone mth2-46o19, complete
sequence
Length = 106587
Score = 95.9 bits (203), Expect(2) = 6e-023
Identities = 43/110 (39%), Positives = 60/110 (54%)
Frame = +2 / -3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ SHV +P ++ L YALF + VQDG Y NLFDA +D++ AAL+ G G V
Sbjct: 74404 YPYFSHVGNPRDISLPYALFTSPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVV 74225
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFD 337
V+E+GWP+ G A + NA Y ++ +G ET +FD
Sbjct: 74224 VSESGWPSDGGAATSYDNARIYLDNLIRHVGKGTPRRPWATETYIFAMFD 74075
Score = 32.2 bits (64), Expect(2) = 6e-023
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2 / -3
Query: 347 EDGKPGPEFERHFGIFRADGSKAYDINF 430
++ + PE E+HFG+F + K Y F
Sbjct: 74077 DENQKSPELEKHFGVFYPNKQKKYPFGF 73994
>gb|BG588681.1|BG588681 EST490490 MHRP- Medicago truncatula cDNA clone pMHRP-57O11, mRNA
sequence
Length = 718
Score = 95.9 bits (203), Expect(2) = 7e-023
Identities = 43/110 (39%), Positives = 60/110 (54%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ SHV +P ++ L YALF + VQDG Y NLFDA +D++ AAL+ G G V
Sbjct: 78 YPYFSHVGNPRDISLPYALFTSPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVV 257
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFD 337
V+E+GWP+ G A + NA Y ++ +G ET +FD
Sbjct: 258 VSESGWPSDGGAATSYDNARIYLDNLIRHVGKGTPRRPWATETYIFAMFD 407
Score = 32.2 bits (64), Expect(2) = 7e-023
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2 / +3
Query: 347 EDGKPGPEFERHFGIFRADGSKAYDINF 430
++ + PE E+HFG+F + K Y F
Sbjct: 405 DENQKSPELEKHFGVFYPNKQKKYPFGF 488
>gb|BF644711.1|BF644711 NF019E05EC1F1038 Elicited cell culture Medicago truncatula cDNA
clone NF019E05EC 5', mRNA sequence
Length = 675
Score = 95.9 bits (203), Expect(2) = 7e-023
Identities = 43/110 (39%), Positives = 60/110 (54%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ SHV +P ++ L YALF + VQDG Y NLFDA +D++ AAL+ G G V
Sbjct: 123 YPYFSHVGNPRDISLPYALFTSPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVV 302
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFD 337
V+E+GWP+ G A + NA Y ++ +G ET +FD
Sbjct: 303 VSESGWPSDGGAATSYDNARIYLDNLIRHVGKGTPRRPWATETYIFAMFD 452
Score = 32.2 bits (64), Expect(2) = 7e-023
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2 / +3
Query: 347 EDGKPGPEFERHFGIFRADGSKAYDINF 430
++ + PE E+HFG+F + K Y F
Sbjct: 450 DENQKSPELEKHFGVFYPNKQKKYPFGF 533
>gb|BQ750414.1|BQ750414 EST633150 KVKC Medicago truncatula cDNA, mRNA sequence
Length = 764
Score = 79.0 bits (166), Expect(2) = 4e-022
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +2 / -2
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
A+PQNA AYN +V++ GTP RP + V+LF L++E+GK G ER+FG+F D
Sbjct: 505 ASPQNAAAYNGNLVKKILNNGGTPLRPNANLTVYLFALFNENGKVGLTSERNFGMFYPDM 326
Query: 407 SKAYDINF 430
K YD+ F
Sbjct: 325 KKVYDVPF 302
Score = 46.4 bits (95), Expect(2) = 4e-022
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2 / -2
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+FDA +DA+ AAL + V V+ETGWP+ G
Sbjct: 640 LKYYNIFDAQIDAVFAALNVLQYDDVRVVVSETGWPSKG 524
>gb|CX528976.1|CX528976 s13dNF26A12MJ085_244012 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 633
Score = 80.3 bits (169), Expect(2) = 4e-022
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = +2 / +2
Query: 212 AGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGI 391
+ P ATP NA YN+ ++ GTPK+PK TV ++++LY+ED + GP E ++G+
Sbjct: 317 SSEPDATPDNANTYNSNLIRHVLNNTGTPKQPKVTVSTYIYELYNEDLRSGPASESNWGL 496
Query: 392 FRADGSKAYDIN 427
F A+G+ Y ++
Sbjct: 497 FYANGAPVYTLH 532
Score = 45.1 bits (92), Expect(2) = 4e-022
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2 / +2
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L YTN+FDA +DA A+ F + VTE+GWP+ G
Sbjct: 197 LHYTNVFDAVIDAAYFAMSYLKFTNIPILVTESGWPSKG 313
>emb|CR349799.1| mte1-84D9FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 720
Score = 64.8 bits (135), Expect(3) = 6e-022
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +2 / +2
Query: 227 ATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADG 406
A+ +NA YN ++ R + GTP P+ +E +LF L++E+ K GP ER++G+F D
Sbjct: 518 ASLKNAEIYNKNLLRRQMKNEGTPLNPRMRLESYLFALFNENMKNGPTSERNYGLFEPDE 697
Query: 407 SKAYDI 424
S Y++
Sbjct: 698 SMTYNV 715
Score = 46.9 bits (96), Expect(3) = 6e-022
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2 / +2
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
L Y N+ A VDA+ A+ K GF G+ V+ETGWP+ G
Sbjct: 383 LHYDNMLYAMVDAVTFAIAKLGFNGIEVRVSETGWPSKG 499
Score = 30.9 bits (61), Expect(3) = 6e-022
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 5 AYPFISHVNDPANVQLAYALF 67
AYP+ ++ NDP + L Y LF
Sbjct: 284 AYPYFAYKNDPNQISLDYVLF 346
>gb|BQ124114.1|BQ124114 EST609690 GLSD Medicago truncatula cDNA clone pGLSD-34G24, mRNA
sequence
Length = 752
Score = 72.5 bits (152), Expect(2) = 8e-022
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +2 / +1
Query: 215 GHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIF 394
G A + NA +YN +++ G GTP P E FLF L++E+ KPGP ER++G+F
Sbjct: 328 GWDACSVANAQSYNGELIRHLEAGRGTPLMPNRRFETFLFALFNENQKPGPIAERNWGLF 507
Query: 395 RADGSKAYD 421
R D S YD
Sbjct: 508 RPDFSPVYD 534
Score = 51.9 bits (107), Expect(2) = 8e-022
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPT 211
L YTN FDA +DA+ +A++ GFG V AV ETGWP+
Sbjct: 208 LTYTNQFDALMDAVYSAMKGLGFGDVDIAVGETGWPS 318
>gb|BI273133.1|BI273133 NF092D11FL1F1093 Developing flower Medicago truncatula cDNA clone
NF092D11FL 5', mRNA sequence
Length = 659
Score = 72.5 bits (152), Expect(2) = 8e-022
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +2 / +1
Query: 215 GHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIF 394
G A + NA +YN +++ G GTP P E FLF L++E+ KPGP ER++G+F
Sbjct: 286 GWDACSVANAQSYNGELIRHLEAGRGTPLMPNRRFETFLFALFNENQKPGPIAERNWGLF 465
Query: 395 RADGSKAYD 421
R D S YD
Sbjct: 466 RPDFSPVYD 492
Score = 51.9 bits (107), Expect(2) = 8e-022
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPT 211
L YTN FDA +DA+ +A++ GFG V AV ETGWP+
Sbjct: 166 LTYTNQFDALMDAVYSAMKGLGFGDVDIAVGETGWPS 276
>gb|BQ124200.1|BQ124200 EST609776 GLSD Medicago truncatula cDNA clone pGLSD-34H23, mRNA
sequence
Length = 631
Score = 72.5 bits (152), Expect(2) = 8e-022
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +2 / +1
Query: 215 GHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIF 394
G A + NA +YN +++ G GTP P E FLF L++E+ KPGP ER++G+F
Sbjct: 328 GWDACSVANAQSYNGELIRHLEAGRGTPLMPNRRFETFLFALFNENQKPGPIAERNWGLF 507
Query: 395 RADGSKAYD 421
R D S YD
Sbjct: 508 RPDFSPVYD 534
Score = 51.9 bits (107), Expect(2) = 8e-022
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPT 211
L YTN FDA +DA+ +A++ GFG V AV ETGWP+
Sbjct: 208 LTYTNQFDALMDAVYSAMKGLGFGDVDIAVGETGWPS 318
>gb|AC171266.11| Medicago truncatula clone mth2-14o4, WORKING DRAFT SEQUENCE, 5
unordered pieces
Length = 138309
Score = 54.7 bits (113), Expect(3) = 2e-021
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +2 / -2
Query: 287 VGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA 433
VGTP RP + F+F LY+E+ K G ERHFG+ +GS+ Y+I+ +
Sbjct: 79568 VGTPARPGSILPSFIFALYNENLKTGLGTERHFGLLYPNGSRIYEIDLS 79422
Score = 52.4 bits (108), Expect(3) = 2e-021
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2 / -2
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
LVYTNLFD VDA+ A+E+ G+ + + ETGWP G
Sbjct: 79769 LVYTNLFDQMVDAVYFAMERLGYPDIQIFIAETGWPNDG 79653
Score = 33.6 bits (67), Expect(3) = 2e-021
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / -2
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQD 94
YPF + +DP N+ L YALF + V D
Sbjct: 79868 YPFFAWTSDPININLDYALFESDNITVTD 79782
>gb|AC136841.25| Medicago truncatula clone mth2-14n9, WORKING DRAFT SEQUENCE
Length = 125970
Score = 54.7 bits (113), Expect(3) = 2e-021
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +2 / +3
Query: 287 VGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA 433
VGTP RP + F+F LY+E+ K G ERHFG+ +GS+ Y+I+ +
Sbjct: 46779 VGTPARPGSILPSFIFALYNENLKTGLGTERHFGLLYPNGSRIYEIDLS 46925
Score = 52.4 bits (108), Expect(3) = 2e-021
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2 / +3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
LVYTNLFD VDA+ A+E+ G+ + + ETGWP G
Sbjct: 46578 LVYTNLFDQMVDAVYFAMERLGYPDIQIFIAETGWPNDG 46694
Score = 33.6 bits (67), Expect(3) = 2e-021
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQD 94
YPF + +DP N+ L YALF + V D
Sbjct: 46479 YPFFAWTSDPININLDYALFESDNITVTD 46565
>gb|AC166147.8| Medicago truncatula clone mth2-145g3, complete sequence
Length = 126336
Score = 71.2 bits (149), Expect(2) = 2e-021
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2 / +1
Query: 239 NATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAY 418
+A+ YN ++ GVGTP P T E ++F L+DE+ KPGP ER+FG+FR + + Y
Sbjct: 113284 SASDYNGNLIRHVTSGVGTPLMPNRTFETYIFALFDENLKPGPICERNFGLFRPNMTLVY 113463
Query: 419 D 421
D
Sbjct: 113464 D 113466
Score = 51.9 bits (107), Expect(2) = 2e-021
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +2 / +1
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPA 226
L YTN+FDA +DA+ +A++ GF V + ETGWPT G A
Sbjct: 113137 LHYTNMFDAQLDAVYSAMKVLGFEDVEIVIGETGWPTIGDSA 113262
>gb|AC168149.7| Medicago truncatula clone mth2-84g4, complete sequence
Length = 122726
Score = 71.2 bits (149), Expect(2) = 2e-021
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2 / +2
Query: 239 NATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAY 418
+A+ YN ++ GVGTP P T E ++F L+DE+ KPGP ER+FG+FR + + Y
Sbjct: 74183 SASDYNGNLIRHVTSGVGTPLMPNRTFETYIFALFDENLKPGPICERNFGLFRPNMTLVY 74362
Query: 419 D 421
D
Sbjct: 74363 D 74365
Score = 51.9 bits (107), Expect(2) = 2e-021
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +2 / +2
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPA 226
L YTN+FDA +DA+ +A++ GF V + ETGWPT G A
Sbjct: 74036 LHYTNMFDAQLDAVYSAMKVLGFEDVEIVIGETGWPTIGDSA 74161
>gb|AC149127.6| Medicago truncatula clone mth2-108o17, complete sequence
Length = 92727
Score = 71.2 bits (149), Expect(2) = 2e-021
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2 / -3
Query: 239 NATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAY 418
+A+ YN ++ GVGTP P T E ++F L+DE+ KPGP ER+FG+FR + + Y
Sbjct: 84268 SASDYNGNLIRHVTSGVGTPLMPNRTFETYIFALFDENLKPGPICERNFGLFRPNMTLVY 84089
Query: 419 D 421
D
Sbjct: 84088 D 84086
Score = 51.9 bits (107), Expect(2) = 2e-021
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +2 / -3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPA 226
L YTN+FDA +DA+ +A++ GF V + ETGWPT G A
Sbjct: 84415 LHYTNMFDAQLDAVYSAMKVLGFEDVEIVIGETGWPTIGDSA 84290
>gb|CG931405.1|CG931405 MBEII75TF mth2 Medicago truncatula genomic clone 62M5, DNA sequence
Length = 893
Score = 71.2 bits (149), Expect(2) = 2e-021
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2 / +3
Query: 239 NATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAY 418
+A+ YN ++ GVGTP P T E ++F L+DE+ KPGP ER+FG+FR + + Y
Sbjct: 459 SASDYNGNLIRHVTSGVGTPLMPNRTFETYIFALFDENLKPGPICERNFGLFRPNMTLVY 638
Query: 419 D 421
D
Sbjct: 639 D 641
Score = 51.9 bits (107), Expect(2) = 2e-021
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +2 / +3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPA 226
L YTN+FDA +DA+ +A++ GF V + ETGWPT G A
Sbjct: 312 LHYTNMFDAQLDAVYSAMKVLGFEDVEIVIGETGWPTIGDSA 437
>gb|CG925742.1|CG925742 MBECQ83TR mth2 Medicago truncatula genomic clone 28M21, DNA
sequence
Length = 725
Score = 71.2 bits (149), Expect(2) = 2e-021
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2 / +1
Query: 239 NATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAY 418
+A+ YN ++ GVGTP P T E ++F L+DE+ KPGP ER+FG+FR + + Y
Sbjct: 418 SASDYNGNLIRHVTSGVGTPLMPNRTFETYIFALFDENLKPGPICERNFGLFRPNMTLVY 597
Query: 419 D 421
D
Sbjct: 598 D 600
Score = 51.9 bits (107), Expect(2) = 2e-021
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +2 / +1
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPA 226
L YTN+FDA +DA+ +A++ GF V + ETGWPT G A
Sbjct: 271 LHYTNMFDAQLDAVYSAMKVLGFEDVEIVIGETGWPTIGDSA 396
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 377,521,321
Number of Sequences: 392609
Number of extensions: 3713906
Number of successful extensions: 27991
Number of sequences better than 1.0e-020: 42
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 17448175452
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)