TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478398.2.5
(1385 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula c... 363 e-119
gb|AC146572.11| Medicago truncatula clone mth2-104c10, comp... 144 e-105
gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Med... 140 6e-058
gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula c... 194 2e-051
gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula g... 145 7e-051
emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A1... 140 2e-050
gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Med... 186 4e-049
gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula ... 180 2e-047
gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cD... 154 1e-039
gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved l... 153 2e-039
gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower M... 151 9e-039
emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17... 145 2e-033
emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A1... 145 2e-033
emb|CR501194.1| mth2-178J6RM1 BAC end, cultivar Jemalong A1... 140 6e-032
emb|CR487557.1| mth2-156M4RM1 BAC end, cultivar Jemalong A1... 136 1e-030
gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating ... 125 2e-027
>gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula cDNA clone MTUS-37D6, mRNA
sequence
Length = 813
Score = 363 bits (788), Expect(2) = e-119
Identities = 146/159 (91%), Positives = 151/159 (94%)
Frame = +3 / -3
Query: 513 LSSQVPYYDYALDLILDIESSHGDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAML 692
LSSQVPYYDYALDLILD+ESSHGDMFTEEQNEL ESAAEMLYG+IHARYILTSKGLAAML
Sbjct: 679 LSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGLAAML 500
Query: 693 EKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAY 872
+KYKNYDFGRCPRVYC GQPCLPVGQSDI RSSTVKIYCP+CEDIYYPRSKYQGNIDGAY
Sbjct: 499 DKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAY 320
Query: 873 FGTTFPHLFLMTYEHLKPQKLSQRYVPRVFGFKLHKP*T 989
FGTTFPHL LMTY LKPQK SQ YVPRVFGFKLHKP*+
Sbjct: 319 FGTTFPHLLLMTYGQLKPQKPSQNYVPRVFGFKLHKP*S 203
Score = 185 bits (398), Expect(3) = 8e-061
Identities = 85/114 (74%), Positives = 92/114 (80%)
Frame = -2 / +3
Query: 991 EVHGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHL 812
+++GL SL PKT GT* C+ FCG C VI NR*GNVVPK APSMLP YLDRG**MSSHL
Sbjct: 201 QLYGL*SLNPKTLGT*FCDGFCGFSCP*VISNR*GNVVPK*APSMLP*YLDRG**MSSHL 380
Query: 811 GQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRA 650
GQYIFTVLD MSD PTGR G P+Q*T GH PKS*FLY SS+AASPLLV + RA
Sbjct: 381 GQYIFTVLDLGMSDWPTGRQGCPEQ*TLGHLPKS*FLYLSSMAASPLLVNI*RA 542
Score = 164 bits (353), Expect = 3e-039
Identities = 71/136 (52%), Positives = 100/136 (73%)
Frame = -1 / +2
Query: 983 WLVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGAV 804
WL++ E+K++RNI L LWL++ + HQ+Q+R+ K+ VDVAL+LGP +V+VFT A+
Sbjct: 209 WLMKFESKNSRNIVL*WFLWLQLSISHQQQVRKCSTKISPVDVALILGPRIVNVFTPRAI 388
Query: 803 YLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLC 624
YLH R +V L+NW+A L+ AVN+ A +VIVL+L+QH SQSF GQ ++ M+ IKHL
Sbjct: 389 YLHSARPRNVGLANWKARLSGAVNSWASTEVIVLVLVQHGSQSFAGQYITGMNHTIKHLR 568
Query: 623 S*FSELILFLSEHITM 576
*F LILFL +H+TM
Sbjct: 569 C*FD*LILFLGKHVTM 616
Score = 162 bits (349), Expect(2) = 2e-040
Identities = 73/146 (50%), Positives = 97/146 (66%)
Frame = +2 / -2
Query: 554 HFRY*IISW*YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPAC 733
+F *++ W*+V+ GTK* RIS DALW D C ++ DQ RTGC+AG+V EL*L +P
Sbjct: 638 NFGC*VLPW*HVYRGTK*VNRISSGDALWYDSCPLYIDQQRTGCHAGQVQEL*LR*MPKS 459
Query: 734 LLLWSTMPASWTIRHPSI*YREDILPQV*RHLLPTVQVPRQHRRRILWDNVPSSVPDDIR 913
LLL +T+P+SW +RH +*+ EDILP+V*RHLL +VQV RQHRR + W + S V DD+
Sbjct: 458 LLLRTTLPSSWPVRHS*V*HCEDILPEV*RHLLSSVQVSRQHRRGLFWYYISSPVADDLW 279
Query: 914 APQATEXXXXXXXXXXWLQAPQAMNL 991
+ATE W+Q A+ L
Sbjct: 278 TTEATETITELCSESFWIQTS*AIKL 201
Score = 149 bits (321), Expect = 7e-035
Identities = 76/157 (48%), Positives = 86/157 (54%)
Frame = -3 / +1
Query: 987 FMACGA*SQRHEEHXXXXXXXXXXXXXXXGTDEGTLSQSMRRRCCLGTWTVGSRCLHTWG 808
FMA * Q+ EH T E Q+ RRCCL TWT S+CLHT G
Sbjct: 205 FMAYEV*IQKLSEHSSVMVSVASVVHKSSATGEEM*YQNKPRRCCLDTWTEDSKCLHTSG 384
Query: 807 SISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQPVLYWSECIVHGSAHKAS 628
+ISS+ * C QL G V SSK G +SHSS T PA QPVL WS H S HKAS
Sbjct: 385 NISSQC*T*ECRTGQLEGKVVRSSKLLGIYRSHSSCTCPAWQPVLCWSIYNGHESYHKAS 564
Query: 627 LQLILRAHFVPQ*TYHHEMIQYLK*DREHNHNKELGC 517
LI HFVP+*T HH Q+ K ++EHNHNK L C
Sbjct: 565 PLLIRLTHFVPR*TCHHGRTQHPKLNQEHNHNKALDC 675
Score = 111 bits (236), Expect = 4e-023
Identities = 58/107 (54%), Positives = 63/107 (58%)
Frame = +1 / -1
Query: 577 MVICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHA 756
MV C RNKMS NQ +RCFM * M +*P KDWL CW S RTMT A+ FTA N A
Sbjct: 615 MVTCLPRNKMS*SNQQRRCFMV*FMPVIY*PAKDWLPCWTSTRTMTSVDAQEFTAPDNLA 436
Query: 757 CQLDNQTSIDLVP*RYTAPSVKTSTTHGPSTKATSTAHTLGQRSLIC 897
QL + T + L *RY A VKT T GPS KATST L L C
Sbjct: 435 FQLASPTFLGLAL*RYIARGVKTFTILGPSIKATSTGLILVLHFLTC 295
Score = 87.2 bits (184), Expect(2) = e-119
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3 / -1
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 774 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLC 682
Score = 51.5 bits (106), Expect(3) = 8e-061
Identities = 24/38 (63%), Positives = 25/38 (65%)
Frame = -2 / +2
Query: 505 RLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLT 392
RLK SQKNSFPLKLQ HEI +VSSPSE T
Sbjct: 686 RLKSSWM*SSSTSQKNSFPLKLQNHEIQDVSSPSETTT 799
Score = 38.6 bits (78), Expect(3) = 8e-061
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = -2 / +3
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLR 512
VN+SP +DS SK++SRA*S**GT LL+
Sbjct: 600 VNMSPWEDSTSKIKSRA*S**GT*LLK 680
Score = 25.8 bits (50), Expect(2) = 2e-040
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2 / -3
Query: 416 HLVDFMVLQLKRE*VLL*SR**LH 487
+++D +VLQ +R+*+LL* *LH
Sbjct: 775 YILDLVVLQFERK*ILL*G*R*LH 704
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence
Length = 109548
Score = 144 bits (308), Expect(5) = e-105
Identities = 53/57 (92%), Positives = 56/57 (98%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDM 587
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ESSHG +
Sbjct: 86285 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGKL 86455
Score = 141 bits (303), Expect(5) = e-105
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3 / +1
Query: 690 LEKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGA 869
L+KYKNYDFGRCPRVYC GQPCLPVGQSDI RSSTVKIYCP+CEDIYYPRSKYQG+I
Sbjct: 86788 LDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGSILIQ 86967
Query: 870 YF 875
Y+
Sbjct: 86968 YY 86973
Score = 102 bits (217), Expect(3) = 1e-034
Identities = 47/66 (71%), Positives = 52/66 (78%)
Frame = -2 / -2
Query: 886 NVVPKYAPSMLPWYLDRG**MSSHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS* 707
+++ Y +LP YLDRG**MSSHLGQYIFTVLD MSD PTGR G P+Q*T GH PKS*
Sbjct: 86984 DIIK*Y*IRILP*YLDRG**MSSHLGQYIFTVLDLGMSDWPTGRQGCPEQ*TLGHLPKS* 86805
Query: 706 FLYFSS 689
FLY SS
Sbjct: 86804 FLYLSS 86787
Score = 95.5 bits (202), Expect(5) = e-105
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +3 / +1
Query: 855 NIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVFGFKLHKP*T 989
+IDGAYFGTTFPHL LMTY LKPQK SQ YVPRVFGFKLHKP*+
Sbjct: 88156 DIDGAYFGTTFPHLLLMTYGQLKPQKPSQNYVPRVFGFKLHKP*S 88290
Score = 89.5 bits (189), Expect(5) = 7e-047
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -2 / -1
Query: 580 P*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSE 401
P +DS SK++SRA*S**GT LL+P RLK SQKNSFPLKLQ HEI +VSSPSE
Sbjct: 86448 PWEDSTSKIKSRA*S**GT*LLKPHRLKSSWM*SSSTSQKNSFPLKLQNHEIQDVSSPSE 86269
Query: 400 PLT 392
PLT
Sbjct: 86268 PLT 86260
Score = 82.6 bits (174), Expect(5) = e-105
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +3 / +3
Query: 579 GDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAML 692
GDMFTEEQNEL ESAAEMLYG+IHARYILTSKGLAAM+
Sbjct: 86589 GDMFTEEQNELIESAAEMLYGMIHARYILTSKGLAAMV 86702
Score = 79.0 bits (166), Expect(2) = 9e-023
Identities = 37/66 (56%), Positives = 51/66 (77%)
Frame = +2 / +3
Query: 689 AGEV*EL*LWAVPACLLLWSTMPASWTIRHPSI*YREDILPQV*RHLLPTVQVPRQHRRR 868
AG+V EL*L +P LLL +T+P+SW +RH +*+ EDILP+V*RHLL +VQV RQ+
Sbjct: 86787 AGQVQEL*LR*MPKSLLLRTTLPSSWPVRHS*V*HCEDILPEV*RHLLSSVQVSRQYPYS 86966
Query: 869 ILWDNV 886
IL+++V
Sbjct: 86967 ILFNDV 86984
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = -1 / -1
Query: 860 DVALVLGPWVVDVFTLGAVYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCS 681
D AL+LGP +V+VFT A+YLH R +V L+NW+A L+ AVN+ A +VIVL+L+Q +
Sbjct: 86958 DTALILGPRIVNVFTPRAIYLHSARPRNVGLANWKARLSGAVNSWASTEVIVLVLVQLQN 86779
Query: 680 QSFTGQNVSC 651
+ Q+ C
Sbjct: 86778 LQYH*QDQPC 86749
Score = 69.3 bits (145), Expect(5) = 7e-047
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -2 / -2
Query: 991 EVHGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSM 857
+++GL SL PKT GT* C+ FCG C VI NR*GNVVPK APSM
Sbjct: 88292 QLYGL*SLNPKTLGT*FCDGFCGFSCP*VISNR*GNVVPK*APSM 88158
Score = 64.3 bits (134), Expect(5) = 7e-047
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = -3 / -3
Query: 855 CLGTWTVGSRCLHTWGSISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPA 688
CL TWT S+CLHT G+ISS+ * C QL G V SSK G +SHSS T PA
Sbjct: 86953 CLDTWTEDSKCLHTSGNISSQC*T*ECRTGQLEGKVVRSSKLLGIYRSHSSCTCPA 86786
Score = 61.1 bits (127), Expect(3) = 1e-034
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = -1 / -3
Query: 530 RNLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIR 366
R+L A+ T++EV+L+V+I++ T+E I S +A P +PR + ++ TNI FT+R R
Sbjct: 86398 RHLTAQTTQIEVILDVIIVNLTKEFISSQIAKPRDPRCIITVGTTNIRLFTVRFR 86234
Score = 51.5 bits (106), Expect(3) = 1e-022
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = -1 / -1
Query: 983 WLVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDV 855
WL++ E+K++RNI L LWL++ + HQ+Q+R+ K+ VDV
Sbjct: 88284 WLMKFESKNSRNIVL*WFLWLQLSISHQQQVRKCSTKISPVDV 88156
Score = 50.1 bits (103), Expect(2) = 9e-023
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 581 *YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCN 688
*+V+ GTK* RIS DALW D C ++ DQ RTGC+
Sbjct: 86591 *HVYRGTK*VNRISSGDALWYDSCPLYIDQQRTGCH 86698
Score = 47.8 bits (98), Expect(5) = 7e-047
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -1 / -2
Query: 689 HCSQSFTGQNVSCMDQPIKHLCS*FSELILFLSEHIT 579
H SQSF GQ ++ M+ IKHL *F LILFL +H+T
Sbjct: 86699 HGSQSFAGQYITGMNHTIKHLRC*FD*LILFLGKHVT 86589
Score = 43.2 bits (88), Expect(3) = 1e-034
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -3 / -1
Query: 684 QPVLYWSECIVHGSAHKASLQLILRAHFVPQ*TYH 580
QPVL WS H S HKAS LI HFVP+*T H
Sbjct: 86694 QPVLCWSIYNGHESYHKASPLLIRLTHFVPR*TCH 86590
Score = 41.8 bits (85), Expect(3) = 1e-022
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3 / -2
Query: 582 HHEMIQYLK*DREHNHNKELGC*GHKG*SRLECXXXXXXXXXXXXXSCNTMKS 424
+H Q+ K ++EHNHNK L C H *S L C +C T +S
Sbjct: 86450 YHGRTQHPKLNQEHNHNKALDCSNHTD*SHLGCNHRQPHKRIHFLSNCKTTRS 86292
Score = 34.1 bits (68), Expect(5) = e-105
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3 / +2
Query: 189 AGLDRKRISDALDKHLEKAVASPS 260
A +DRKRI+D LDK LE++ S S
Sbjct: 85190 ASVDRKRINDVLDKQLERSSPSTS 85261
Score = 29.0 bits (57), Expect(5) = 7e-047
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / -1
Query: 238 SRCLSSASLIRFRSRPAPTPAPP 170
S CLS SLIRFRS A + P
Sbjct: 85239 SSCLSRTSLIRFRSTDATSALDP 85171
>gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Medicago truncatula cDNA clone
NF020A01RT 5', mRNA sequence
Length = 390
Score = 140 bits (301), Expect(3) = 6e-058
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +3 / +3
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSH 578
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ESSH
Sbjct: 69 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSH 230
Score = 96.8 bits (205), Expect(3) = 2e-031
Identities = 45/64 (70%), Positives = 50/64 (78%)
Frame = -2 / -3
Query: 583 SP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPS 404
S *+DS SK++SRA*S**GTWLL PQRLK SQKNSFPL+LQ HEI +VSSPS
Sbjct: 235 SS*EDSTSKIKSRA*S**GTWLLNPQRLKSSWM*SSSTSQKNSFPLRLQNHEIQDVSSPS 56
Query: 403 EPLT 392
EPLT
Sbjct: 55 EPLT 44
Score = 68.4 bits (143), Expect(3) = 6e-058
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3 / +3
Query: 594 EEQNELGESAAEMLYGLIHARYILTSKGLAAM 689
EEQNEL ESAAEMLYG+IHARYILTSKG+AAM
Sbjct: 231 EEQNELIESAAEMLYGMIHARYILTSKGMAAM 326
Score = 56.5 bits (117), Expect(3) = 6e-058
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 690 LEKYKNYDFGRCPRVYCCGQP 752
L+KYKNYDFGRCPRVYC GQP
Sbjct: 328 LDKYKNYDFGRCPRVYCSGQP 390
Score = 44.6 bits (91), Expect(3) = 2e-031
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = -1 / -2
Query: 719 PKVIVLILLQHCSQSFTGQNVSCMDQPIKHLCS*FSELILFL 594
PK L L +H S SF Q VS M+ IKHLC F+ L+LFL
Sbjct: 356 PKS*FLYLSRHSSHSFACQYVSRMNHTIKHLCCRFN*LVLFL 231
Score = 35.0 bits (70), Expect(3) = 2e-031
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2 / -2
Query: 751 G*PQQ*TRGHRPKS*FLYFS 692
G P+Q*T GH PKS*FLY S
Sbjct: 389 GCPEQ*TLGHLPKS*FLYLS 330
>gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula cDNA clone MTYB854, mRNA
sequence
Length = 792
Score = 194 bits (419), Expect(2) = 2e-051
Identities = 77/92 (83%), Positives = 81/92 (88%)
Frame = +3 / +3
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ESSHGDMFTE
Sbjct: 426 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTE 605
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAML 692
EQNEL ES AEMLYG+IHA+ LA L
Sbjct: 606 EQNELIESVAEMLYGMIHAQEFTAPDNLAFQL 701
Score = 108 bits (230), Expect(3) = 1e-032
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +3 / +2
Query: 714 FGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQ 851
+ CPRVYC GQPCLPVGQSDI RSSTV+IYCP+CEDIYYPRSKYQ
Sbjct: 650 YDSCPRVYCSGQPCLPVGQSDIPRSSTVRIYCPRCEDIYYPRSKYQ 787
Score = 96.4 bits (204), Expect(4) = 5e-042
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = -2 / -3
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
VN+SP +DS SK++SRA*S**GT LL+P RLK SQKNSFPLKLQ HEI +VS
Sbjct: 601 VNMSPWEDSTSKIKSRA*S**GT*LLKPHRLKSSWM*SSSTSQKNSFPLKLQNHEIQDVS 422
Query: 412 SPSEPLT 392
SPSEPLT
Sbjct: 421 SPSEPLT 401
Score = 77.1 bits (162), Expect(4) = 5e-042
Identities = 34/42 (80%), Positives = 35/42 (83%)
Frame = -2 / -1
Query: 847 YLDRG**MSSHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGH 722
YLDRG**MSSHLGQYI TVLD MSD PTGR G P+Q*T GH
Sbjct: 783 YLDRG**MSSHLGQYILTVLDLGMSDWPTGRQGCPEQ*TLGH 658
Score = 43.2 bits (88), Expect(3) = 1e-032
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2 / +2
Query: 554 HFRY*IISW*YVH*GTK*ARRISCRDALWADPC 652
+F *++ W*+V+ GTK* RIS DALW D C
Sbjct: 563 NFGC*VLPW*HVYRGTK*VNRISSGDALWYDSC 661
Score = 34.1 bits (68), Expect(2) = 2e-051
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 189 AGLDRKRISDALDKHLEKAVASPS 260
A +DRKRI+D LDK LE++ S S
Sbjct: 192 ASVDRKRINDVLDKQLERSSPSTS 263
Score = 34.1 bits (68), Expect(4) = 5e-042
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / -2
Query: 650 MDQPIKHLCS*FSELILFLSEHITM 576
M+ IKHL *F LILFL +H+TM
Sbjct: 659 MNHTIKHLRY*FD*LILFLGKHVTM 585
Score = 29.0 bits (57), Expect(4) = 5e-042
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / -3
Query: 238 SRCLSSASLIRFRSRPAPTPAPP 170
S CLS SLIRFRS A + P
Sbjct: 241 SSCLSRTSLIRFRSTDATSALDP 173
Score = 28.6 bits (56), Expect(3) = 1e-032
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2 / +2
Query: 392 C*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
C*W +++D +VLQ +R+*+LL* *LH
Sbjct: 401 C*WFRR**YILDLVVLQFERK*ILL*G*R*LH 496
>gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula genomic clone 75B7, DNA sequence
Length = 906
Score = 145 bits (311), Expect(2) = 7e-051
Identities = 53/57 (92%), Positives = 57/57 (100%)
Frame = +3 / -2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDM 587
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ESSHG++
Sbjct: 530 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGEL 360
Score = 100 bits (213), Expect(2) = 8e-028
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -2 / +1
Query: 583 SP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPS 404
SP*+DS SK++SRA*S**GTWLL PQRLK SQKNSFPL+LQ HEI +VSSPS
Sbjct: 364 SP*EDSTSKIKSRA*S**GTWLLNPQRLKSSWM*SSSTSQKNSFPLRLQNHEIQDVSSPS 543
Query: 403 EPLT 392
EPLT
Sbjct: 544 EPLT 555
Score = 81.7 bits (172), Expect(2) = 7e-051
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = +3 / -3
Query: 579 GDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAML 692
GDMFTEEQNEL ESAAEMLYG+IHARYILTSKG+AAM+
Sbjct: 148 GDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMV 35
Score = 49.2 bits (101), Expect(2) = 8e-028
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = -1 / +2
Query: 689 HCSQSFTGQNVSCMDQPIKHLCS*FSELILFLSEHIT 579
H S SF Q VS M+ IKHLC F+ L+LFL EHIT
Sbjct: 38 HSSHSFACQYVSRMNHTIKHLCCRFN*LVLFLCEHIT 148
>emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 624
Score = 140 bits (300), Expect(2) = 2e-050
Identities = 51/57 (89%), Positives = 55/57 (96%)
Frame = +3 / +1
Query: 690 LEKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNI 860
L+KYKNYDFGRCPRVYC GQPCLPVGQSDI RSSTVKIYCP+CED+YYPRSKYQG+I
Sbjct: 289 LDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGSI 459
Score = 99.6 bits (211), Expect(2) = 1e-028
Identities = 46/61 (75%), Positives = 48/61 (78%)
Frame = -2 / -2
Query: 871 YAPSMLPWYLDRG**MSSHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFS 692
Y +LP YLDRG** SSHLGQYIFTVLD MSD PTGR G P+Q*T GH PKS*FLY S
Sbjct: 470 YVIRILP*YLDRG**RSSHLGQYIFTVLDLGMSD*PTGRQGCPEQ*TLGHLPKS*FLYLS 291
Query: 691 S 689
S
Sbjct: 290 S 288
Score = 81.7 bits (172), Expect(2) = 2e-050
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = +3 / +2
Query: 579 GDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAML 692
GDMFTEEQNEL ESAAEMLYG+IHARYILTSKG+AAM+
Sbjct: 92 GDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMV 205
Score = 49.2 bits (101), Expect(2) = 1e-028
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = -1 / -3
Query: 689 HCSQSFTGQNVSCMDQPIKHLCS*FSELILFLSEHIT 579
H S SF Q VS M+ IKHLC F+ L+LFL EHIT
Sbjct: 202 HSSHSFACQYVSRMNHTIKHLCCRFN*LVLFLCEHIT 92
>gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Medicago truncatula cDNA clone
NF089F06LF 5', mRNA sequence
Length = 638
Score = 186 bits (401), Expect(2) = 4e-049
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +3 / +3
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ESSHGDMFTE
Sbjct: 408 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTE 587
Query: 597 EQNELGESAAEMLYGLI 647
EQNEL ES AEMLYG+I
Sbjct: 588 EQNELIESXAEMLYGMI 638
Score = 96.4 bits (204), Expect(3) = 1e-024
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = -2 / -2
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
VN+SP +DS SK++SRA*S**GT LL+P RLK SQKNSFPLKLQ HEI +VS
Sbjct: 583 VNMSPWEDSTSKIKSRA*S**GT*LLKPHRLKSSWM*SSSTSQKNSFPLKLQNHEIQDVS 404
Query: 412 SPSEPLT 392
SPSEPLT
Sbjct: 403 SPSEPLT 383
Score = 34.1 bits (68), Expect(2) = 4e-049
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 189 AGLDRKRISDALDKHLEKAVASPS 260
A +DRKRI+D LDK LE++ S S
Sbjct: 174 ASVDRKRINDVLDKQLERSSPSTS 245
Score = 32.7 bits (65), Expect(3) = 1e-024
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1 / -1
Query: 638 IKHLCS*FSELILFLSEHITM 576
IKHL *F LILFL +H+TM
Sbjct: 629 IKHLRX*FD*LILFLGKHVTM 567
Score = 29.0 bits (57), Expect(3) = 1e-024
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 238 SRCLSSASLIRFRSRPAPTPAPP 170
S CLS SLIRFRS A + P
Sbjct: 223 SSCLSRTSLIRFRSTDATSALDP 155
>gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula cDNA clone mt--acc955211g03,
mRNA sequence
Length = 551
Score = 180 bits (387), Expect(2) = 2e-047
Identities = 71/79 (89%), Positives = 73/79 (92%)
Frame = +3 / +1
Query: 753 CLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQK 932
CLPVGQSDI RSSTVKIYCP+CEDIYYPRSKYQGNIDGAYFGTTFPHL LMTY LKPQK
Sbjct: 34 CLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLLLMTYGQLKPQK 213
Query: 933 LSQRYVPRVFGFKLHKP*T 989
SQ YVPRVFGFKLHKP*+
Sbjct: 214 PSQNYVPRVFGFKLHKP*S 270
Score = 133 bits (286), Expect = 5e-030
Identities = 60/79 (75%), Positives = 64/79 (81%)
Frame = -2 / -1
Query: 991 EVHGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHL 812
+++GL SL PKT GT* C+ FCG C VI NR*GNVVPK APSMLP YLDRG**MSSHL
Sbjct: 272 QLYGL*SLNPKTLGT*FCDGFCGFSCP*VISNR*GNVVPK*APSMLP*YLDRG**MSSHL 93
Query: 811 GQYIFTVLDRWMSDCPTGR 755
GQYIFTVLD MSD PTGR
Sbjct: 92 GQYIFTVLDLGMSDWPTGR 36
Score = 31.8 bits (63), Expect(2) = 2e-047
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 720 RCPRVYCCGQP 752
RCPRVYC GQP
Sbjct: 2 RCPRVYCSGQP 34
>gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cDNA clone pKV1-18I24, mRNA
sequence
Length = 566
Score = 154 bits (331), Expect(2) = 1e-039
Identities = 58/61 (95%), Positives = 60/61 (98%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ESSHGDM TE
Sbjct: 383 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMCTE 562
Query: 597 E 599
E
Sbjct: 563 E 565
Score = 34.1 bits (68), Expect(2) = 1e-039
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3 / +2
Query: 189 AGLDRKRISDALDKHLEKAVASPS 260
A +DRKRI+D LDK LE++ S S
Sbjct: 149 ASVDRKRINDVLDKQLERSSPSTS 220
>gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved leaf Medicago truncatula cDNA
clone NF091D01PL 5', mRNA sequence
Length = 582
Score = 153 bits (329), Expect(2) = 2e-039
Identities = 57/59 (96%), Positives = 59/59 (100%)
Frame = +3 / +3
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFT 593
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ESSHGDMFT
Sbjct: 405 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFT 581
Score = 96.4 bits (204), Expect(2) = 8e-021
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = -2 / -3
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
VN+SP +DS SK++SRA*S**GT LL+P RLK SQKNSFPLKLQ HEI +VS
Sbjct: 580 VNMSPWEDSTSKIKSRA*S**GT*LLKPHRLKSSWM*SSSTSQKNSFPLKLQNHEIQDVS 401
Query: 412 SPSEPLT 392
SPSEPLT
Sbjct: 400 SPSEPLT 380
Score = 34.1 bits (68), Expect(2) = 2e-039
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 189 AGLDRKRISDALDKHLEKAVASPS 260
A +DRKRI+D LDK LE++ S S
Sbjct: 171 ASVDRKRINDVLDKQLERSSPSTS 242
Score = 29.0 bits (57), Expect(2) = 8e-021
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / -3
Query: 238 SRCLSSASLIRFRSRPAPTPAPP 170
S CLS SLIRFRS A + P
Sbjct: 220 SSCLSRTSLIRFRSTDATSALDP 152
>gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower Medicago truncatula cDNA clone
NF107D02FL 5', mRNA sequence
Length = 619
Score = 151 bits (325), Expect(2) = 9e-039
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = +3 / +1
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFT 593
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ES HGDMFT
Sbjct: 424 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESXHGDMFT 600
Score = 34.1 bits (68), Expect(2) = 9e-039
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 189 AGLDRKRISDALDKHLEKAVASPS 260
A +DRKRI+D LDK LE++ S S
Sbjct: 190 ASVDRKRINDVLDKQLERSSPSTS 261
>emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 626
Score = 145 bits (311), Expect = 2e-033
Identities = 53/57 (92%), Positives = 57/57 (100%)
Frame = +3 / -2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDM 587
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ESSHG++
Sbjct: 463 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGEL 293
>emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 560
Score = 145 bits (311), Expect = 2e-033
Identities = 53/57 (92%), Positives = 57/57 (100%)
Frame = +3 / -2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDM 587
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILD+ESSHG++
Sbjct: 295 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGEL 125
>emb|CR501194.1| mth2-178J6RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 805
Score = 140 bits (300), Expect = 6e-032
Identities = 51/57 (89%), Positives = 55/57 (96%)
Frame = +3 / +2
Query: 690 LEKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNI 860
L+KYKNYDFGRCPRVYC GQPCLPVGQSDI RSSTVKIYCP+CED+YYPRSKYQG+I
Sbjct: 50 LDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGSI 220
>emb|CR487557.1| mth2-156M4RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 165
Score = 136 bits (291), Expect = 1e-030
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +3 / +3
Query: 693 EKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQG 854
+KYKNYDFGRCPRVYC GQPCLPVGQSDI RSSTVKIYCP+CED+YYPRSKYQG
Sbjct: 3 DKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQG 164
>gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 620
Score = 125 bits (267), Expect = 2e-027
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +3 / +1
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLI 557
TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLI
Sbjct: 478 TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLI 618
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,205,298,275
Number of Sequences: 392609
Number of extensions: 16434813
Number of successful extensions: 50538
Number of sequences better than 1.0e-020: 18
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 50729581935
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)