TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448637.2.1
(1190 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC166046.6| Medicago truncatula clone mth2-6p7, WORKING ... 139 2e-073
gb|AC170856.1| Medicago truncatula chromosome 2 clone mth2-... 133 3e-070
gb|AC138171.17| Medicago truncatula clone mth2-7f10, comple... 114 1e-063
gb|AL375054.1|AL375054 MtBB11A08F1 MtBB Medicago truncatula... 165 1e-059
gb|BG448529.1|BG448529 NF036G02RT1F1017 Developing root Med... 201 4e-056
gb|AL382395.1|AL382395 MtBC06E08F1 MtBC Medicago truncatula... 141 8e-054
gb|AC147428.6| Medicago truncatula clone mth2-34i10, comple... 140 6e-053
gb|BG450908.1|BG450908 NF095E08DT1F1065 Drought Medicago tr... 188 9e-052
gb|AW690621.2|AW690621 NF036F01ST1F1000 Developing stem Med... 199 6e-050
gb|AL385470.1|AL385470 MtBC28G06F1 MtBC Medicago truncatula... 188 2e-046
gb|BG645345.1|BG645345 EST506964 KV3 Medicago truncatula cD... 163 2e-043
gb|AL382396.1|AL382396 MtBC06E08R1 MtBC Medicago truncatula... 169 4e-042
gb|AL375055.1|AL375055 MtBB11A08R1 MtBB Medicago truncatula... 152 1e-035
gb|AL385177.1|AL385177 MtBC26G12F1 MtBC Medicago truncatula... 146 6e-034
gb|CB894606.1|CB894606 EST647398 HOGA Medicago truncatula c... 128 1e-030
emb|CR351559.1| mte1-9G19RM1 BAC end, cultivar Jemalong A17... 106 2e-023
>gb|AC166046.6| Medicago truncatula clone mth2-6p7, WORKING DRAFT SEQUENCE, 8
unordered pieces
Length = 118925
Score = 139 bits (299), Expect(4) = 2e-073
Identities = 59/103 (57%), Positives = 77/103 (74%)
Frame = -3 / +3
Query: 1092 TLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVI 913
TLDLAS+LD+G +AS D + + +RSV+TIAF+F YE H+Q++VA MARQYVRS+I
Sbjct: 7671 TLDLASALDIGPTGNRASSDNAGNSGCVRSVMTIAFEFAYESHMQENVACMARQYVRSII 7850
Query: 912 SAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHY 784
S+VQRV++A+SPS +AG R G PEA TLA W+C SY Y
Sbjct: 7851 SSVQRVALALSPSNLSSHAGLRSPLGTPEAQTLAHWICNSYRY 7979
Score = 87.2 bits (184), Expect(4) = 2e-073
Identities = 33/53 (62%), Positives = 48/53 (90%)
Frame = -3 / +2
Query: 675 PMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYL 517
P+FTF+N+AGLDMLET+LVALQD++L+KIFD++GRK LFS+ ++++Q Y +L
Sbjct: 9125 PVFTFSNQAGLDMLETTLVALQDISLEKIFDDNGRKTLFSEFPQIIQQVYNFL 9283
Score = 84.0 bits (177), Expect(4) = 2e-073
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = -3 / +2
Query: 531 GYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
G+A L G+C+S MGR VS+++AVAWKVL ++ N HC+ F FVNWSFV*
Sbjct: 9425 GFACLQGGICLSSMGRPVSYERAVAWKVLNDEQNAHCICFMFVNWSFV* 9571
Score = 68.0 bits (142), Expect(3) = 1e-021
Identities = 41/101 (40%), Positives = 55/101 (54%)
Frame = +1 / -1
Query: 784 VVITLANPSSKCGSFREARKHPMPSI*TRLGGRYSHRHSLHSRNDTTNILTGHCCNAVLK 963
V IT+A+P SK FR + P PS+*T++ R R+ L +T NIL H C +L
Sbjct: 7979 VPITVADPMSKGLCFRGT*R*PQPSM*TQIRRRKC*RYPLD**YNTANILACHACYILLH 7800
Query: 964 VHLIRELKGDCQHRSQIAVIWRCIP*GLGCSRAHIKTRCQI 1086
+ I + K C HRS A I I * SRA++K RC+I
Sbjct: 7799 MTFICKFKCYCHHRSHTARISSIIT*CSVSSRANVKGRCKI 7677
Score = 52.8 bits (109), Expect(4) = 2e-073
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -3 / +3
Query: 783 HLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFK 682
+LG+ELL + E++LK LWHH DAVLCC+ K
Sbjct: 8628 YLGVELLKSNTEGKESVLKSLWHHSDAVLCCTLK 8729
Score = 51.9 bits (107), Expect(3) = 1e-021
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +2 / -3
Query: 533 CSISFEMSENSAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHR 700
C I + SE F P SS I S + SC+AT VS+MSSPA F VN G + Q R
Sbjct: 9267 C*IIWGNSEKRVFRPLSSNIFSRLISCNATSVVSSMSSPAWFEKVNTGIACLIQRR 9100
Score = 41.8 bits (85), Expect(3) = 1e-021
Identities = 23/48 (47%), Positives = 26/48 (54%)
Frame = +2 / -3
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*P 532
TKDQ T Q SS STF ATA S ET RP+ + P R+A P
Sbjct: 9567 TKDQFTNIKQIQ*AFCSSFSTFQATALSYETGRPMLERQIPPCRHAKP 9424
>gb|AC170856.1| Medicago truncatula chromosome 2 clone mth2-13d14, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 101063
Score = 133 bits (285), Expect(5) = 3e-070
Identities = 58/101 (57%), Positives = 74/101 (73%)
Frame = -3 / -3
Query: 1092 TLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVI 913
TLDL S+LD+G A +AS D S + +RSV+TIAF+F +E H+QD VA+MARQYVRS+I
Sbjct: 71766 TLDLTSALDIGPAGNKASNDYSGNSGCMRSVMTIAFEFAFESHMQDHVASMARQYVRSII 71587
Query: 912 SAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSY 790
S+VQRV++A+SPS G R G PEA TLARW+ SY
Sbjct: 71586 SSVQRVALALSPSNLNSQGGLRTPLGTPEAQTLARWISNSY 71464
Score = 85.4 bits (180), Expect(5) = 3e-070
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = -3 / -3
Query: 543 LMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
L+ QG+A L G+C+S MGR +S+++ VAWKVL E+ N HC+ F FVNWSFV*
Sbjct: 70578 LIWQGFACLQGGLCLSSMGRPISYERVVAWKVLNEEENAHCICFMFVNWSFV* 70420
Score = 77.6 bits (163), Expect(5) = 3e-070
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = -3 / -1
Query: 675 PMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQ 532
P+FTFAN+AGLDMLET+LVALQD+ L+KIFD+ GRK L S+ +++Q
Sbjct: 70883 PVFTFANQAGLDMLETTLVALQDIALEKIFDDHGRKILCSEFPLIIQQ 70740
Score = 53.8 bits (111), Expect(5) = 3e-070
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -3 / -1
Query: 780 LGMELLNQSDGAGEALLKMLWHHPDAVLCCSFK 682
LG ELL ++ E+LLK LWHH DA+LCC+ K
Sbjct: 71318 LGAELLKSNNEGSESLLKSLWHHTDAILCCTLK 71220
Score = 27.6 bits (54), Expect(5) = 3e-070
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3 / -1
Query: 1188 IDXXXXDDAPLIXXXXRVIXLD 1123
ID DDAPL+ R+I LD
Sbjct: 72002 IDASFADDAPLLPSGFRIIPLD 71937
>gb|AC138171.17| Medicago truncatula clone mth2-7f10, complete sequence
Length = 104336
Score = 114 bits (244), Expect(4) = 1e-063
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = -3 / +2
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
N R VLT+AFQFP+E LQD+VAAMARQYVR V+SAVQ V+ AISPS + G ++ G
Sbjct: 82124 NNRCVLTVAFQFPFESGLQDNVAAMARQYVRRVVSAVQAVATAISPSSVNTSGGAKLSPG 82303
Query: 834 FPEAATLARWVCQSYHYHLGMELL 763
PEA TLA+W+CQSY L L+
Sbjct: 82304 TPEALTLAQWICQSYR*SLHESLM 82375
Score = 98.2 bits (208), Expect(4) = 1e-063
Identities = 34/50 (68%), Positives = 44/50 (88%)
Frame = -3 / +2
Query: 534 QGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
QG+A +P+G+CMS MGRH S+DQAVAWKV ED+++HCLAF F+NWSF+*
Sbjct: 82934 QGFACMPAGICMSTMGRHASYDQAVAWKVHAEDNSVHCLAFSFINWSFI* 83083
Score = 86.8 bits (183), Expect(4) = 1e-063
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = -3 / +2
Query: 696 CCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQ 532
C ++ P+F FAN+AGLDMLET+LVALQD+TLDKIFDES RK L + +KLM+Q
Sbjct: 82643 CLVLQQVPVFIFANQAGLDMLETTLVALQDITLDKIFDESARKNLIAYFAKLMQQ 82807
Score = 85.4 bits (180), Expect(5) = 9e-038
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = +2 / -3
Query: 791 *LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRTY*RAIAATLS*RCI 970
*LWQ H ASV+ASG P P +GDIA+ T CTAE T RTY*RA+AATLS R +
Sbjct: 82347 *LWQIH*ASVSASGVPGESFAPPEVLTLDGDIAVATACTAETTRRTY*RAMAATLSCRPL 82168
Query: 971 SYGN*KAIVST 1003
S GN*KA V+T
Sbjct: 82167 SKGN*KATVNT 82135
Score = 55.1 bits (114), Expect(5) = 9e-038
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +2 / -3
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*P 532
H DQL + A+Q LLSS TFHATA S E RPI DM P G A P
Sbjct: 83082 HINDQLMNEKAKQ*TLLSSACTFHATA*SYEACRPIVDMQIPAGIQANP 82936
Score = 52.4 bits (108), Expect(5) = 9e-038
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = +2 / -3
Query: 533 CSISFEMSENSAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLK 688
C I+F DSS ILSSV SC ATR VSNMS PA A +N G K
Sbjct: 82806 CCINFAKYAIKFLRADSSNILSSVISCRATRVVSNMSRPAWLAKMNTGTCCK 82651
Score = 40.9 bits (83), Expect(5) = 9e-038
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2 / -3
Query: 674 GFSLKEQHRTASG*CQSIFNNASPAPSD*LSNSIPR 781
G + KEQH+ ASG*C F++ SP LS+ PR
Sbjct: 82557 GHTFKEQHKIASG*CHKCFSSISPIRESDLSSCAPR 82450
Score = 33.1 bits (66), Expect(5) = 9e-038
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / -2
Query: 1027 RCIP*GLGCSRAHIKTRCQI 1086
RC+ + C RA+ KTRCQI
Sbjct: 82117 RCVSVSMSCCRAYFKTRCQI 82058
Score = 30.4 bits (60), Expect(4) = 1e-063
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3 / +2
Query: 1092 TLDLASSLDVGSAAPQASGDAS 1027
TLDL S L+V A A+GDAS
Sbjct: 82052 TLDLTSGLEVSPATAHANGDAS 82117
>gb|AL375054.1|AL375054 MtBB11A08F1 MtBB Medicago truncatula cDNA clone MtBB11A08 T3, mRNA
sequence
Length = 492
Score = 165 bits (355), Expect(2) = 1e-059
Identities = 66/111 (59%), Positives = 83/111 (74%)
Frame = -3 / +1
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF +E H +D+VA+MARQYVRSV+++VQRV+MAI+PS+ G G + L G
Sbjct: 1 NLRSVLTIAFQFTFENHWRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPG 180
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFK 682
PEA LARW+ +SY H G EL A +A+LK LWHH DA++CCS K
Sbjct: 181 SPEAHALARWISRSYRMHTGAELFRVESAASDAILKQLWHHSDAIMCCSVK 333
Score = 86.8 bits (183), Expect(2) = 1e-059
Identities = 34/49 (69%), Positives = 44/49 (89%)
Frame = -3 / +1
Query: 675 PMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQG 529
P+FTF+N+AGLDMLET+LVALQD+ LDK+ DE+GRK L S+ SK+M+QG
Sbjct: 346 PIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQG 492
Score = 81.7 bits (172), Expect(2) = 4e-027
Identities = 54/117 (46%), Positives = 62/117 (52%)
Frame = +2 / -2
Query: 662 NVNIGFSLKEQHRTASG*CQSIFNNASPAPSD*LSNSIPRW***LWQTHLASVAASGKPE 841
N+ F EQH AS CQS F+ AS A L +S P *L H A ASG+P
Sbjct: 353 NIGDAFVFTEQHIIASEWCQSCFSIASLAADSTLKSSAPVCIL*LLDIHRAKA*ASGEPG 174
Query: 842 SILCPAFRPDWEGDIAIDTLCTAEMTLRTY*RAIAATLS*RCISYGN*KAIVSTDLK 1012
P+ P EG IA+ TL T TLRTY RAI ATLS + S N AIV TDL+
Sbjct: 173 RDFGPS*VPGREGAIAMATL*TDATTLRTYWRAIEATLSRQ*FSKVNWNAIVRTDLR 3
Score = 62.0 bits (129), Expect(2) = 4e-027
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +2 / -2
Query: 530 PCSISFEMSENSAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIG 676
PC I E SE FLP SS+ LSS+ S ATR VS+MSSPA F VNIG
Sbjct: 491 PCCIILENSEQRIFLPASSRTLSSIIS*RATRVVSSMSSPAWFEKVNIG 345
>gb|BG448529.1|BG448529 NF036G02RT1F1017 Developing root Medicago truncatula cDNA clone
NF036G02RT 5', mRNA sequence
Length = 468
Score = 201 bits (433), Expect(2) = 4e-056
Identities = 74/119 (62%), Positives = 100/119 (84%)
Frame = -3 / +1
Query: 741 EALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKAL 562
E++LK LWHH DAVLCC+ K P+FTF+N+AGLDMLET+LVALQD++L+KIFD++GRK L
Sbjct: 91 ESVLKSLWHHSDAVLCCTLKAMPVFTFSNQAGLDMLETTLVALQDISLEKIFDDNGRKTL 270
Query: 561 FSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
FS+ ++++QG+A L G+C+S MGR VS+++AVAWKVL ++ N HC+ F FVNW FV*
Sbjct: 271 FSEFPQIIQQGFACLQGGICLSSMGRPVSYERAVAWKVLNDEQNAHCICFMFVNWXFV* 447
Score = 39.6 bits (80), Expect(2) = 4e-056
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3 / +3
Query: 828 EAATLARWVCQSYHYHLGMELLNQS 754
EA TLA W+C SY +LG+ELL +
Sbjct: 3 EAQTLAHWICNSYRCYLGVELLKSN 77
>gb|AL382395.1|AL382395 MtBC06E08F1 MtBC Medicago truncatula cDNA clone MtBC06E08 T3, mRNA
sequence
Length = 481
Score = 141 bits (303), Expect(2) = 8e-054
Identities = 55/103 (53%), Positives = 72/103 (69%)
Frame = -3 / +3
Query: 990 AFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLA 811
AFQF +E HL+D+VA+MARQYVRSV+++VQRV+MAI+PS+ G G + L G PEA LA
Sbjct: 3 AFQFTFENHLRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTXLGPKSLPGSPEAHALA 182
Query: 810 RWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFK 682
RW+ + Y H G L +A+LK LWHH A++CCS K
Sbjct: 183 RWISRXYRMHTGAXLFRVESAXSDAILKQLWHHSXAIMCCSVK 311
Score = 91.3 bits (193), Expect(2) = 8e-054
Identities = 36/51 (70%), Positives = 45/51 (88%)
Frame = -3 / +3
Query: 675 PMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYA 523
P+FTF+N+AGLDMLET+LVALQD+ LDK+ DE GRK L S+ SK+M+QGYA
Sbjct: 324 PIFTFSNQAGLDMLETTLVALQDIMLDKVLDEXGRKILCSEFSKIMQQGYA 476
Score = 63.4 bits (132), Expect(2) = 1e-021
Identities = 32/53 (60%), Positives = 35/53 (66%)
Frame = +2 / -1
Query: 518 RYA*PCSISFEMSENSAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIG 676
R A*PC I E SE FLP SS+ LSS+ S ATR VS+MSSPA F VN G
Sbjct: 481 RDA*PCCIILENSEQRIFLPXSSRTLSSIIS*RATRVVSSMSSPAWFEKVNXG 323
Score = 61.6 bits (128), Expect(2) = 1e-021
Identities = 42/99 (42%), Positives = 46/99 (46%)
Frame = +2 / -1
Query: 662 NVNIGFSLKEQHRTASG*CQSIFNNASPAPSD*LSNSIPRW***LWQTHLASVAASGKPE 841
N F EQH A CQS F+ AS L + P * H A ASG+P
Sbjct: 331 NXGDAFVFTEQHIIAXEWCQSCFSIASLXADSTLKSXAPVCIL*XLDIHRAKA*ASGEPG 152
Query: 842 SILCPAFRPDWEGDIAIDTLCTAEMTLRTY*RAIAATLS 958
P P EG IA+ TL T TLRTY RAI ATLS
Sbjct: 151 RDFGPX*VPGREGAIAMATL*TDATTLRTYWRAIEATLS 35
>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence
Length = 112873
Score = 140 bits (300), Expect(3) = 6e-053
Identities = 59/110 (53%), Positives = 77/110 (70%)
Frame = -3 / +1
Query: 1113 DGVXXGXTLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMAR 934
D TLDLAS+L+VG+ +A GD S +SV+TIAFQF +E HLQD++AAMAR
Sbjct: 44212 DAASPNRTLDLASALEVGTTGNKAGGDNSGHSGITKSVMTIAFQFAFEAHLQDNIAAMAR 44391
Query: 933 QYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHY 784
QYVRS++++VQRVS+A+SPS+ G + G PEA TL RW+C SY Y
Sbjct: 44392 QYVRSIVASVQRVSLALSPSRFGSQNAFPLPPGTPEAQTLTRWICNSYRY 44541
Score = 83.1 bits (175), Expect(3) = 6e-053
Identities = 32/48 (66%), Positives = 44/48 (91%)
Frame = -3 / +2
Query: 675 PMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQ 532
P+FTFAN+AGLDMLET+LVALQD+TL+KIFD++G+K L S+ ++M+Q
Sbjct: 44906 PVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQ 45049
Score = 44.6 bits (91), Expect(3) = 6e-053
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -3 / +1
Query: 741 EALLKMLWHHPDAVLCCSFK 682
E++LK LWHH DAVLCCS K
Sbjct: 44686 ESILKSLWHHSDAVLCCSLK 44745
>gb|BG450908.1|BG450908 NF095E08DT1F1065 Drought Medicago truncatula cDNA clone NF095E08DT
5', mRNA sequence
Length = 694
Score = 188 bits (404), Expect(2) = 9e-052
Identities = 69/119 (57%), Positives = 96/119 (80%)
Frame = -3 / -1
Query: 741 EALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKAL 562
E++LK L HH DAV CCS K P+FTFAN+AGLDMLET+LVALQD+TL+KIFD++G+K L
Sbjct: 571 ESILKSLXHHSDAVXCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTL 392
Query: 561 FSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+ ++M+QG+ + G+C+S MGR +++++AVAWKVL E+ + HC+ F F+NWSFV*
Sbjct: 391 CXEFPQIMQQGFMCIQGGICLSSMGRPITYERAVAWKVLNEEESAHCICFMFINWSFV* 215
Score = 38.2 bits (77), Expect(2) = 9e-052
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3 / -1
Query: 837 GFPEAATLARWVCQSYHYHLGMELL 763
G EA TL RW+C S ++LG ELL
Sbjct: 661 GTXEAQTLTRWICNSXRFYLGAELL 587
>gb|AW690621.2|AW690621 NF036F01ST1F1000 Developing stem Medicago truncatula cDNA clone
NF036F01ST 5', mRNA sequence
Length = 425
Score = 199 bits (430), Expect = 6e-050
Identities = 82/135 (60%), Positives = 103/135 (76%)
Frame = -3 / +1
Query: 1008 RSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFP 829
R+ +TIAF+F +E H+QD VA+MARQYVRS+IS+VQRV++A+SPS G R G P
Sbjct: 4 RAEMTIAFEFAFESHMQDHVASMARQYVRSIISSVQRVALALSPSNLNSQGGLRTPLGTP 183
Query: 828 EAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKA 649
EA TLARW+ SY LG ELL ++ E+LLK LWHH DA+LCC+ K P+FTFAN+A
Sbjct: 184 EAQTLARWISNSYRCFLGAELLKSNNEGSESLLKSLWHHTDAILCCTLKALPVFTFANQA 363
Query: 648 GLDMLETSLVALQDL 604
GLDMLET+LVALQD+
Sbjct: 364 GLDMLETTLVALQDI 408
>gb|AL385470.1|AL385470 MtBC28G06F1 MtBC Medicago truncatula cDNA clone MtBC28G06 T3, mRNA
sequence
Length = 426
Score = 188 bits (405), Expect = 2e-046
Identities = 78/142 (54%), Positives = 101/142 (71%)
Frame = -3 / +1
Query: 1086 DLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISA 907
DL S+LD+G A +A+ D S + +RSV+TIAF+F +E H+QD VA+MARQYVRS+IS+
Sbjct: 1 DLTSALDIGPAGNKAANDCSGNSGCMRSVMTIAFEFAFESHMQDHVASMARQYVRSIISS 180
Query: 906 VQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLK 727
VQRV++A+SPS G R G PEA TLARW+ SY LG ELL ++ E+LLK
Sbjct: 181 VQRVALALSPSNLNSQGGLRTPLGTPEAQTLARWISNSYRCFLGAELLKSNNEGSESLLK 360
Query: 726 MLWHHPDAVLCCSFKEKPMFTF 661
LWHH DA+LCC+ K P+FTF
Sbjct: 361 SLWHHTDAILCCTLKALPVFTF 426
>gb|BG645345.1|BG645345 EST506964 KV3 Medicago truncatula cDNA clone pKV3-39P8 5' end, mRNA
sequence
Length = 801
Score = 163 bits (351), Expect(2) = 2e-043
Identities = 67/117 (57%), Positives = 85/117 (72%)
Frame = -3 / +2
Query: 1032 ASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAG 853
A + NLRSVLTIAFQF +E HL+D+VA+MARQYVRSV+++VQRV+MAI+PS+ G G
Sbjct: 437 AGSNGYNLRSVLTIAFQFTFENHLRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTQLG 616
Query: 852 HRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFK 682
+ L G PEA LARW+ +SY H G EL A +A+LK LWHH DA++C S K
Sbjct: 617 PKSLPGSPEAHALARWISRSYRMHTGAELFRVESAASDAILKQLWHHSDAIMCWSVK 787
Score = 34.5 bits (69), Expect(2) = 2e-043
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -3 / +2
Query: 1188 IDXXXXDDAPLIXXXXRVIXLDVXXDGVXXGXTLDL 1081
ID DDA L+ RVI LD DG TLDL
Sbjct: 290 IDESFADDALLLPSGFRVIPLDPKSDGPTTSRTLDL 397
>gb|AL382396.1|AL382396 MtBC06E08R1 MtBC Medicago truncatula cDNA clone MtBC06E08 T7, mRNA
sequence
Length = 526
Score = 169 bits (363), Expect(2) = 4e-042
Identities = 65/101 (64%), Positives = 85/101 (84%)
Frame = -3 / +1
Query: 675 PMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMS 496
P+FTF+N+AGLDMLET+LVALQD+ LDK+ DE+GRK L S+ SK+M+QGYA LP G+C+S
Sbjct: 46 PIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYASLPGGICVS 225
Query: 495 GMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV*LKSN 373
M R VS++QA+AWKVL +D HCLAF F+NWSFV* +++
Sbjct: 226 SMNRPVSYEQAIAWKVLNDDDANHCLAFMFINWSFV*WRNH 348
Score = 24.9 bits (48), Expect(2) = 4e-042
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / +1
Query: 714 HPDAVLCCSFK 682
H DA++CCS K
Sbjct: 1 HSDAIMCCSVK 33
>gb|AL375055.1|AL375055 MtBB11A08R1 MtBB Medicago truncatula cDNA clone MtBB11A08 T7, mRNA
sequence
Length = 535
Score = 152 bits (326), Expect = 1e-035
Identities = 59/92 (64%), Positives = 76/92 (82%)
Frame = -3 / +1
Query: 648 GLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFD 469
GLDMLET+LVALQD+ LDK+ DE+GRK L S+ SK+M+QGYA LP G+C+S M R VS++
Sbjct: 1 GLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYASLPGGICVSSMNRPVSYE 180
Query: 468 QAVAWKVLGEDSNIHCLAFCFVNWSFV*LKSN 373
QA+AWKVL +D HCLAF F+NWSFV* +++
Sbjct: 181 QAIAWKVLNDDDANHCLAFMFINWSFV*WRNH 276
>gb|AL385177.1|AL385177 MtBC26G12F1 MtBC Medicago truncatula cDNA clone MtBC26G12 T3, mRNA
sequence
Length = 408
Score = 146 bits (314), Expect = 6e-034
Identities = 65/120 (54%), Positives = 84/120 (70%)
Frame = -3 / +2
Query: 1092 TLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVI 913
TLDL S+LD+G A +AS D S + +RSV+TIAF+F +E H+QD VA+MARQYVRS+I
Sbjct: 47 TLDLTSALDIGPAGNKASNDYSGNSGCMRSVMTIAFEFAFESHMQDHVASMARQYVRSII 226
Query: 912 SAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEAL 733
S+VQRV++A+SPS G R G PEA TLARW+ SY LG ELL ++ E+L
Sbjct: 227 SSVQRVALALSPSNLNSQGGLRTPLGTPEAQTLARWISNSYRCFLGAELLKSNNEGSESL 406
>gb|CB894606.1|CB894606 EST647398 HOGA Medicago truncatula cDNA clone HOGA-31D6, mRNA
sequence
Length = 897
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 57/99 (57%), Positives = 70/99 (70%)
Frame = -3 / +1
Query: 1059 SAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAIS 880
S A G S N RSVLTIAFQFP++ +QD+V MARQYVRSVI++VQRV+MAIS
Sbjct: 601 SPATTHGGADSSSSQNTRSVLTIAFQFPFDSTMQDNVVIMARQYVRSVIASVQRVAMAIS 780
Query: 879 PSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELL 763
PS G ++ G PEA TLA+W+CQSY Y+LG +LL
Sbjct: 781 PSGINPAVGAKLSPGSPEAVTLAQWICQSYSYYLGTDLL 897
Score = 26.3 bits (51), Expect(2) = 1e-030
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3 / +1
Query: 1188 IDXXXXDDAPLIXXXXRVIXLD 1123
ID DDAPL+ R+I LD
Sbjct: 463 IDEMFPDDAPLVPSGFRIIPLD 528
>emb|CR351559.1| mte1-9G19RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 680
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 45/73 (61%), Positives = 60/73 (82%)
Frame = -3 / -2
Query: 1092 TLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVI 913
TLDL S+LD+G A +AS D S + +RSV+TIAF+F +E H+QD VA+MARQYVRS+I
Sbjct: 229 TLDLTSALDIGPAGNKASNDYSGNSGCMRSVMTIAFEFAFESHMQDHVASMARQYVRSII 50
Query: 912 SAVQRVSMAISPS 874
S+VQRV++A+SPS
Sbjct: 49 SSVQRVALALSPS 11
Score = 27.6 bits (54), Expect(2) = 2e-023
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3 / -3
Query: 1188 IDXXXXDDAPLIXXXXRVIXLD 1123
ID DDAPL+ R+I LD
Sbjct: 465 IDASFADDAPLLPSGFRIIPLD 400
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,251,260,834
Number of Sequences: 392609
Number of extensions: 18920672
Number of successful extensions: 72271
Number of sequences better than 1.0e-020: 21
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 42846935076
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)