TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448569.2.1
(758 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA918790.1|CA918790 EST636508 MTUS Medicago truncatula c... 68 8e-031
gb|CX541958.1|CX541958 s13dNF84B06GS057_467224 Germinating ... 68 1e-030
gb|BQ153734.1|BQ153734 NF043H09IR1F1079 Irradiated Medicago... 109 1e-030
gb|BF637343.1|BF637343 NF025H11PL1F1094 Phosphate starved l... 110 1e-030
gb|CA922506.1|CA922506 EST640224 MTUS Medicago truncatula c... 68 1e-030
gb|BI269082.1|BI269082 NF006D09IR1F1077 Irradiated Medicago... 109 2e-030
gb|BQ156161.1|BQ156161 NF089G12IR1F1100 Irradiated Medicago... 109 2e-030
gb|BQ155519.1|BQ155519 NF081C06IR1F1050 Irradiated Medicago... 109 2e-030
gb|BI270982.1|BI270982 NF001B12FL1F1101 Developing flower M... 109 2e-030
gb|BQ155655.1|BQ155655 NF082G12IR1F1100 Irradiated Medicago... 109 2e-030
gb|AW775967.1|AW775967 EST335032 DSIL Medicago truncatula c... 109 2e-030
gb|BQ154256.1|BQ154256 NF056F12IR1F1102 Irradiated Medicago... 109 2e-030
gb|CX539800.1|CX539800 s13dNF0HC09GS066_462872 Germinating ... 109 2e-030
gb|CX538106.1|CX538106 s13dNF52A03GS017_459454 Germinating ... 109 8e-030
gb|BI268849.1|BI268849 NF020C04GS1F1033 Germinating Seed Me... 109 8e-030
gb|CX536945.1|CX536945 s13dNF20C04GS033_457074 Germinating ... 109 8e-030
gb|CX542311.1|CX542311 s13dNF82C11GS084_467938 Germinating ... 109 8e-030
gb|BQ153612.1|BQ153612 NF040D05IR1F1045 Irradiated Medicago... 102 2e-028
gb|BG647282.1|BG647282 EST508901 HOGA Medicago truncatula c... 65 3e-028
gb|CA920594.1|CA920594 EST638312 MTUS Medicago truncatula c... 60 3e-026
gb|BQ165643.1|BQ165643 EST611512 KVKC Medicago truncatula c... 58 3e-026
gb|CX522122.1|CX522122 s13dNF77D10VI080_470048 Virus-Infect... 58 3e-026
gb|BF003859.1|BF003859 EST432357 KV1 Medicago truncatula cD... 89 2e-024
gb|AC174353.4| Medicago truncatula clone mth2-8a15, WORKING... 68 1e-023
gb|BG583555.1|BG583555 EST485307 GVN Medicago truncatula cD... 68 1e-023
gb|CA921291.1|CA921291 EST639009 MTUS Medicago truncatula c... 68 1e-023
gb|AW299181.1|AW299181 EST305991 KV2 Medicago truncatula cD... 68 1e-023
gb|CX542367.1|CX542367 s13dNF84B06GS046_468050 Germinating ... 61 3e-023
gb|BQ156431.1|BQ156431 NF092G03IR1F1024 Irradiated Medicago... 110 4e-023
gb|BQ137690.1|BQ137690 NF003B05NR1F1000 Nodulated root Medi... 68 4e-023
gb|AW981218.1|AW981218 EST392308 DSIL Medicago truncatula c... 68 4e-023
gb|BE943409.1|BE943409 EST422988 MGHG Medicago truncatula c... 109 5e-023
gb|BQ152149.1|BQ152149 NF010H11IR1F1095 Irradiated Medicago... 109 5e-023
gb|BQ152835.1|BQ152835 NF025E08IR1F1067 Irradiated Medicago... 109 5e-023
gb|BQ153084.1|BQ153084 NF029E01IR1F1007 Irradiated Medicago... 109 5e-023
gb|BQ154979.1|BQ154979 NF074H09IR1F1080 Irradiated Medicago... 109 5e-023
gb|BQ155728.1|BQ155728 NF083F03IR1F1031 Irradiated Medicago... 109 5e-023
gb|BQ155905.1|BQ155905 NF085E08IR1F1067 Irradiated Medicago... 109 5e-023
gb|BQ157723.1|BQ157723 NF108E08IR1F1067 Irradiated Medicago... 109 5e-023
gb|BQ153381.1|BQ153381 NF035G02IR1F1018 Irradiated Medicago... 106 4e-022
gb|AC148761.1| Medicago truncatula chromosome 2 clone mth2-... 64 1e-021
gb|AL376239.1|AL376239 MtBB22C04R1 MtBB Medicago truncatula... 104 2e-021
emb|CR969619.1| mth4-23B8FM1 BAC end, cultivar Jemalong A17... 58 3e-021
gb|DW015682.1|DW015682 EST1224643 MTY Medicago truncatula c... 54 7e-021
gb|BQ155055.1|BQ155055 NF075G05IR1F1040 Irradiated Medicago... 54 7e-021
gb|BQ154454.1|BQ154454 NF071A09IR1F1069 Irradiated Medicago... 54 7e-021
emb|CR299174.1| mte1-17C1FM1 BAC end, cultivar Jemalong A17... 58 9e-021
>gb|CA918790.1|CA918790 EST636508 MTUS Medicago truncatula cDNA clone MTUS-3C4, mRNA
sequence
Length = 757
Score = 68.0 bits (142), Expect(3) = 8e-031
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = -2 / -3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W++++LD+ G ++W ++N+M YNYC+D RFPQGLP EC
Sbjct: 290 WLSQELDATGQGRLKWVQKNYMIYNYCKDTKRFPQGLPPEC 168
Score = 61.6 bits (128), Expect(3) = 8e-031
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = -2 / -3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DW+ APF SYR++
Sbjct: 506 VPFPKNQPMRIYSSLWNADNWATRGGLVKTDWTKAPFTASYRNF 375
Score = 43.7 bits (89), Expect(3) = 8e-031
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2 / -3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
HTY+IIWNP I+F VD IR FK + P
Sbjct: 599 HTYSIIWNPQRIIFSVDGTPIREFKNSETIGVP 501
>gb|CX541958.1|CX541958 s13dNF84B06GS057_467224 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 591
Score = 68.0 bits (142), Expect(3) = 1e-030
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W++++LD+ G ++W ++N+M YNYC+D RFPQGLP EC
Sbjct: 459 WLSQELDATGQGRLKWVQKNYMIYNYCKDTKRFPQGLPPEC 581
Score = 61.1 bits (127), Expect(3) = 1e-030
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = -2 / +3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DW+ APF SYR +
Sbjct: 243 VPFPKNQPMRIYSSLWNADNWATRGGLVKTDWTKAPFTASYRKF 374
Score = 43.7 bits (89), Expect(3) = 1e-030
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
HTY+IIWNP I+F VD IR FK + P
Sbjct: 150 HTYSIIWNPQRIIFSVDGTPIREFKNSETIGVP 248
>gb|BQ153734.1|BQ153734 NF043H09IR1F1079 Irradiated Medicago truncatula cDNA clone
NF043H09IR 5', mRNA sequence
Length = 592
Score = 109 bits (233), Expect(2) = 1e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 182 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 361
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 362 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 493
Score = 45.1 bits (92), Expect(2) = 1e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +2
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 77 TRNFHTYSIIWKPQHIIFXVDNMPIRVFKNVESIGVP 187
>gb|BF637343.1|BF637343 NF025H11PL1F1094 Phosphate starved leaf Medicago truncatula cDNA
clone NF025H11PL 5', mRNA sequence
Length = 555
Score = 110 bits (234), Expect(2) = 1e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 142 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 321
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 322 AEWQINELDAYGXRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 453
Score = 44.6 bits (91), Expect(2) = 1e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +1
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 37 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 147
>gb|CA922506.1|CA922506 EST640224 MTUS Medicago truncatula cDNA clone MTUS-54E11, mRNA
sequence
Length = 669
Score = 68.4 bits (143), Expect(3) = 1e-030
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2 / -2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W+++QLDS +RW ++N+M YNYC D RFPQGLP EC
Sbjct: 347 WLSQQLDSTGQQRLRWVQKNYMIYNYCSDKKRFPQGLPVEC 225
Score = 62.5 bits (130), Expect(3) = 1e-030
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = -2 / -2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DWS APF SYR++
Sbjct: 560 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTASYRNF 429
Score = 41.4 bits (84), Expect(3) = 1e-030
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2 / -2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTY+I+WNP I+F VD IR FK
Sbjct: 653 HTYSILWNPQRIVFSVDGTPIREFK 579
>gb|BI269082.1|BI269082 NF006D09IR1F1077 Irradiated Medicago truncatula cDNA clone
NF006D09IR 5', mRNA sequence
Length = 666
Score = 109 bits (233), Expect(2) = 2e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 183 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 362
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 363 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 494
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 78 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 188
>gb|BQ156161.1|BQ156161 NF089G12IR1F1100 Irradiated Medicago truncatula cDNA clone
NF089G12IR 5', mRNA sequence
Length = 668
Score = 109 bits (233), Expect(2) = 2e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 183 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 362
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 363 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 494
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 78 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 188
>gb|BQ155519.1|BQ155519 NF081C06IR1F1050 Irradiated Medicago truncatula cDNA clone
NF081C06IR 5', mRNA sequence
Length = 663
Score = 109 bits (233), Expect(2) = 2e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 309 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 488
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 489 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 620
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 204 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 314
>gb|BI270982.1|BI270982 NF001B12FL1F1101 Developing flower Medicago truncatula cDNA clone
NF001B12FL 5', mRNA sequence
Length = 647
Score = 109 bits (233), Expect(2) = 2e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 178 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 357
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 358 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 489
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +1
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 73 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 183
>gb|BQ155655.1|BQ155655 NF082G12IR1F1100 Irradiated Medicago truncatula cDNA clone
NF082G12IR 5', mRNA sequence
Length = 630
Score = 109 bits (233), Expect(2) = 2e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 183 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 362
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 363 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 494
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 78 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 188
>gb|AW775967.1|AW775967 EST335032 DSIL Medicago truncatula cDNA clone pDSIL-3L3, mRNA
sequence
Length = 614
Score = 109 bits (233), Expect(2) = 2e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / -1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 464 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 285
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 284 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 153
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / -1
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 569 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 459
>gb|BQ154256.1|BQ154256 NF056F12IR1F1102 Irradiated Medicago truncatula cDNA clone
NF056F12IR 5', mRNA sequence
Length = 598
Score = 109 bits (233), Expect(2) = 2e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 110 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 289
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 290 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 421
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +2
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 5 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 115
>gb|CX539800.1|CX539800 s13dNF0HC09GS066_462872 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 583
Score = 109 bits (233), Expect(2) = 2e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 176 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 355
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 356 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 487
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +2
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 71 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 181
>gb|CX538106.1|CX538106 s13dNF52A03GS017_459454 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 582
Score = 109 bits (233), Expect(2) = 8e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 119 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 298
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 299 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 430
Score = 42.3 bits (86), Expect(2) = 8e-030
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
HTY+IIW P I+F VD++ IR FK + P
Sbjct: 26 HTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 124
>gb|BI268849.1|BI268849 NF020C04GS1F1033 Germinating Seed Medicago truncatula cDNA clone
NF020C04GS 5', mRNA sequence
Length = 576
Score = 109 bits (233), Expect(2) = 8e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 94 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 273
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 274 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 405
Score = 42.3 bits (86), Expect(2) = 8e-030
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
HTY+IIW P I+F VD++ IR FK + P
Sbjct: 1 HTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 99
>gb|CX536945.1|CX536945 s13dNF20C04GS033_457074 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 553
Score = 109 bits (233), Expect(2) = 8e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 95 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 274
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 275 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 406
Score = 42.3 bits (86), Expect(2) = 8e-030
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
HTY+IIW P I+F VD++ IR FK + P
Sbjct: 2 HTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 100
>gb|CX542311.1|CX542311 s13dNF82C11GS084_467938 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 526
Score = 109 bits (233), Expect(2) = 8e-030
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 103 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 282
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 283 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 414
Score = 42.3 bits (86), Expect(2) = 8e-030
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
HTY+IIW P I+F VD++ IR FK + P
Sbjct: 10 HTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 108
>gb|BQ153612.1|BQ153612 NF040D05IR1F1045 Irradiated Medicago truncatula cDNA clone
NF040D05IR 5', mRNA sequence
Length = 487
Score = 102 bits (218), Expect(2) = 2e-028
Identities = 37/100 (37%), Positives = 54/100 (54%)
Frame = -2 / +3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 183 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 362
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLP 350
W +LD+ +RW ++ FM YNYC D RFPQG+P
Sbjct: 363 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVP 482
Score = 44.6 bits (91), Expect(2) = 2e-028
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 78 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 188
>gb|BG647282.1|BG647282 EST508901 HOGA Medicago truncatula cDNA clone pHOGA-16O5 5' end,
mRNA sequence
Length = 759
Score = 64.8 bits (135), Expect(3) = 3e-028
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P S+PM ++++LW+ WAT G V DWS+APF SYR++
Sbjct: 424 VPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSNAPFTASYRNF 555
Score = 58.8 bits (122), Expect(3) = 3e-028
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAE 344
W + +LDS ++W ++N+M YNYC D RFPQGLP +
Sbjct: 625 WFSEELDSTSHERLKWVQKNYMIYNYCTDTKRFPQGLPQD 744
Score = 40.9 bits (83), Expect(3) = 3e-028
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTY+I+WNP I+F VD IR FK
Sbjct: 331 HTYSILWNPQRIVFSVDGSPIREFK 405
>gb|CA920594.1|CA920594 EST638312 MTUS Medicago truncatula cDNA clone MTUS-30A12, mRNA
sequence
Length = 815
Score = 60.2 bits (125), Expect(3) = 3e-026
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = -2 / -3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 510 IPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNF 379
Score = 56.1 bits (116), Expect(3) = 3e-026
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = -2 / -3
Query: 457 NRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECAR 335
+ +LD+ +RW ++ FM YNYC D RFP+G+PAEC R
Sbjct: 321 SNELDAYGRRRLRWVQKYFMIYNYCNDLKRFPEGIPAECKR 199
Score = 41.4 bits (84), Expect(3) = 3e-026
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2 / -3
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+++ HTY+IIW P I+F VD+ IR FK + P
Sbjct: 615 TKNFHTYSIIWKPQHIIFLVDNTPIRIFKNAESIGIP 505
>gb|BQ165643.1|BQ165643 EST611512 KVKC Medicago truncatula cDNA clone pKVKC-10F10, mRNA
sequence
Length = 800
Score = 58.3 bits (121), Expect(3) = 3e-026
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = -2 / -2
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P ++PM ++++LW+ WAT G V DW++APF SYR++
Sbjct: 409 FPKNQPMRIYSSLWNADDWATRGGLVKTDWTNAPFTASYRNF 284
Score = 57.9 bits (120), Expect(3) = 3e-026
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = -2 / -2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
W +QLDS + ++N+M YNYC D RFPQGLP EC * S
Sbjct: 256 WFTQQLDSTSQQRLSEVQKNYMIYNYCTDIKRFPQGLPTECTAS*LIS 113
Score = 41.4 bits (84), Expect(3) = 3e-026
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2 / -2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTY+I+WNP I+F VD IR FK
Sbjct: 508 HTYSILWNPQRIVFSVDGTPIREFK 434
>gb|CX522122.1|CX522122 s13dNF77D10VI080_470048 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 607
Score = 58.3 bits (121), Expect(3) = 3e-026
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = -2 / +1
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P ++PM ++++LW+ WAT G V DW++APF SYR++
Sbjct: 166 FPKNQPMRIYSSLWNADDWATRGGLVKTDWTNAPFTASYRNF 291
Score = 57.9 bits (120), Expect(3) = 3e-026
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
W +QLDS + ++N+M YNYC D RFPQGLP EC * S
Sbjct: 319 WFTQQLDSTSQQRLSEVQKNYMIYNYCTDIKRFPQGLPTECTAS*LIS 462
Score = 41.4 bits (84), Expect(3) = 3e-026
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTY+I+WNP I+F VD IR FK
Sbjct: 67 HTYSILWNPQRIVFSVDGTPIREFK 141
>gb|BF003859.1|BF003859 EST432357 KV1 Medicago truncatula cDNA clone pKV1-13J24, mRNA
sequence
Length = 561
Score = 89.0 bits (188), Expect(2) = 2e-024
Identities = 31/91 (34%), Positives = 47/91 (51%)
Frame = -2 / +3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 288 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 467
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQD 377
W +LD+ +RW ++ FM YNYC D
Sbjct: 468 AEWQINELDAYGRRRLRWVQKYFMIYNYCND 560
Score = 44.6 bits (91), Expect(2) = 2e-024
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
+R+ HTY+IIW P I+F VD++ IR FK + P
Sbjct: 183 TRNFHTYSIIWKPQHIIFLVDNMPIRVFKNVESIGVP 293
>gb|AC174353.4| Medicago truncatula clone mth2-8a15, WORKING DRAFT SEQUENCE, 17
unordered pieces
Length = 101872
Score = 68.4 bits (143), Expect(2) = 1e-023
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2 / -2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W+++QLDS +RW ++N+M YNYC D RFPQGLP EC
Sbjct: 42204 WLSQQLDSTGQQRLRWVQKNYMIYNYCSDKKRFPQGLPVEC 42082
Score = 68.0 bits (142), Expect(2) = 3e-023
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = -2 / -1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W++++LD+ G ++W ++N+M YNYC+D RFPQGLP EC
Sbjct: 39079 WLSQELDATGQGRLKWVQKNYMIYNYCKDTKRFPQGLPPEC 38957
Score = 62.5 bits (130), Expect(2) = 1e-023
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = -2 / -2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DWS APF SYR++
Sbjct: 42417 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTASYRNF 42286
Score = 61.6 bits (128), Expect(2) = 3e-023
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = -2 / -1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DW+ APF SYR++
Sbjct: 39295 VPFPKNQPMRIYSSLWNADNWATRGGLVKTDWTKAPFTASYRNF 39164
>gb|BG583555.1|BG583555 EST485307 GVN Medicago truncatula cDNA clone pGVN-73N11 5' end,
mRNA sequence
Length = 720
Score = 68.4 bits (143), Expect(2) = 1e-023
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W+++QLDS +RW ++N+M YNYC D RFPQGLP EC
Sbjct: 377 WLSQQLDSTGQQRLRWVQKNYMIYNYCSDKKRFPQGLPVEC 499
Score = 62.5 bits (130), Expect(2) = 1e-023
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DWS APF SYR++
Sbjct: 164 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTASYRNF 295
>gb|CA921291.1|CA921291 EST639009 MTUS Medicago truncatula cDNA clone MTUS-38E9, mRNA
sequence
Length = 705
Score = 68.4 bits (143), Expect(2) = 1e-023
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2 / -2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W+++QLDS +RW ++N+M YNYC D RFPQGLP EC
Sbjct: 314 WLSQQLDSTGQQRLRWVQKNYMIYNYCSDKKRFPQGLPVEC 192
Score = 62.5 bits (130), Expect(2) = 1e-023
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = -2 / -2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DWS APF SYR++
Sbjct: 527 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTASYRNF 396
>gb|AW299181.1|AW299181 EST305991 KV2 Medicago truncatula cDNA clone KV2-9J15, mRNA
sequence
Length = 695
Score = 68.4 bits (143), Expect(2) = 1e-023
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W+++QLDS +RW ++N+M YNYC D RFPQGLP EC
Sbjct: 397 WLSQQLDSTGQQRLRWVQKNYMIYNYCSDKKRFPQGLPVEC 519
Score = 62.5 bits (130), Expect(2) = 1e-023
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DWS APF SYR++
Sbjct: 184 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTASYRNF 315
>gb|CX542367.1|CX542367 s13dNF84B06GS046_468050 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 540
Score = 61.1 bits (127), Expect(3) = 3e-023
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DW+ APF SYR +
Sbjct: 244 VPFPKNQPMRIYSSLWNADNWATRGGLVKTDWTKAPFTASYRKF 375
Score = 43.7 bits (89), Expect(3) = 3e-023
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
HTY+IIWNP I+F VD IR FK + P
Sbjct: 151 HTYSIIWNPQRIIFSVDGTPIREFKNSETIGVP 249
Score = 42.8 bits (87), Expect(3) = 3e-023
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYC 383
W++++LD+ G ++W ++N+M YNYC
Sbjct: 460 WLSQELDATGQGRLKWVQKNYMIYNYC 540
>gb|BQ156431.1|BQ156431 NF092G03IR1F1024 Irradiated Medicago truncatula cDNA clone
NF092G03IR 5', mRNA sequence
Length = 749
Score = 110 bits (234), Expect = 4e-023
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 178 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 357
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 358 AEWQINELDAYGXRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 489
>gb|BQ137690.1|BQ137690 NF003B05NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF003B05NR 5', mRNA sequence
Length = 1133
Score = 68.0 bits (142), Expect(2) = 4e-023
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W++++LD+ G ++W ++N+M YNYC+D RFPQGLP EC
Sbjct: 341 WLSQELDATGQGRLKWVQKNYMIYNYCKDTKRFPQGLPPEC 463
Score = 61.6 bits (128), Expect(2) = 4e-023
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DW+ APF SYR++
Sbjct: 125 VPFPKNQPMRIYSSLWNADNWATRGGLVKTDWTKAPFTASYRNF 256
>gb|AW981218.1|AW981218 EST392308 DSIL Medicago truncatula cDNA clone pDSIL-12C3, mRNA
sequence
Length = 570
Score = 68.0 bits (142), Expect(2) = 4e-023
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = -2 / -2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W++++LD+ G ++W ++N+M YNYC+D RFPQGLP EC
Sbjct: 314 WLSQELDATGQGRLKWVQKNYMIYNYCKDTKRFPQGLPPEC 192
Score = 61.6 bits (128), Expect(2) = 4e-023
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = -2 / -2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++PM ++++LW+ WAT G V DW+ APF SYR++
Sbjct: 530 VPFPKNQPMRIYSSLWNADNWATRGGLVKTDWTKAPFTASYRNF 399
>gb|BE943409.1|BE943409 EST422988 MGHG Medicago truncatula cDNA clone pMGHG-15N13, mRNA
sequence
Length = 494
Score = 109 bits (233), Expect = 5e-023
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / -1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 464 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 285
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 284 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 153
>gb|BQ152149.1|BQ152149 NF010H11IR1F1095 Irradiated Medicago truncatula cDNA clone
NF010H11IR 5', mRNA sequence
Length = 797
Score = 109 bits (233), Expect = 5e-023
Identities = 40/104 (38%), Positives = 58/104 (55%)
Frame = -2 / -1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 623 VPFPKNQPMRIYSSLWNXDDWATRGGLVKXDWSKAPFTAYYRNFKATQFSTKFSLSSNXD 444
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 443 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDXKRFPQGVPVECS 312
>gb|BQ152835.1|BQ152835 NF025E08IR1F1067 Irradiated Medicago truncatula cDNA clone
NF025E08IR 5', mRNA sequence
Length = 607
Score = 109 bits (233), Expect = 5e-023
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / -3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 479 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 300
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 299 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 168
>gb|BQ153084.1|BQ153084 NF029E01IR1F1007 Irradiated Medicago truncatula cDNA clone
NF029E01IR 5', mRNA sequence
Length = 556
Score = 109 bits (233), Expect = 5e-023
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 70 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 249
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 250 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 381
>gb|BQ154979.1|BQ154979 NF074H09IR1F1080 Irradiated Medicago truncatula cDNA clone
NF074H09IR 5', mRNA sequence
Length = 489
Score = 109 bits (233), Expect = 5e-023
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 61 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 240
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 241 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 372
>gb|BQ155728.1|BQ155728 NF083F03IR1F1031 Irradiated Medicago truncatula cDNA clone
NF083F03IR 5', mRNA sequence
Length = 627
Score = 109 bits (233), Expect = 5e-023
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 76 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 255
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 256 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 387
>gb|BQ155905.1|BQ155905 NF085E08IR1F1067 Irradiated Medicago truncatula cDNA clone
NF085E08IR 5', mRNA sequence
Length = 577
Score = 109 bits (233), Expect = 5e-023
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 90 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 269
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 270 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 401
>gb|BQ157723.1|BQ157723 NF108E08IR1F1067 Irradiated Medicago truncatula cDNA clone
NF108E08IR 5', mRNA sequence
Length = 556
Score = 109 bits (233), Expect = 5e-023
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 70 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 249
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 250 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 381
>gb|BQ153381.1|BQ153381 NF035G02IR1F1018 Irradiated Medicago truncatula cDNA clone
NF035G02IR 5', mRNA sequence
Length = 538
Score = 106 bits (226), Expect = 4e-022
Identities = 38/104 (36%), Positives = 56/104 (53%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXX 470
+P+P ++PM ++++LW+ WAT G V DWS APF YR++
Sbjct: 116 VPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSD 295
Query: 469 XGWMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W +LD+ +RW ++ FM YNYC D RFPQ +P EC+
Sbjct: 296 AEWQINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQXVPVECS 427
>gb|AC148761.1| Medicago truncatula chromosome 2 clone mth2-19h23, *** SEQUENCING IN
PROGRESS ***, 14 unordered pieces
Length = 125354
Score = 64.3 bits (134), Expect(2) = 1e-021
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W+ LDS +RW ++N+M YNYC D RFPQG PAEC
Sbjct: 67099 WLRESLDSKGIRKIRWVQKNYMIYNYCTDYKRFPQGFPAEC 67221
Score = 59.7 bits (124), Expect(2) = 1e-021
Identities = 18/44 (40%), Positives = 32/44 (72%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P ++ M ++++LW+ WAT G V DW++APF+ SYR++
Sbjct: 66883 VPFPKNQAMRIYSSLWNADNWATRGGIVKTDWTNAPFIASYRNF 67014
>gb|AL376239.1|AL376239 MtBB22C04R1 MtBB Medicago truncatula cDNA clone MtBB22C04 T7, mRNA
sequence
Length = 488
Score = 104 bits (221), Expect = 2e-021
Identities = 38/101 (37%), Positives = 54/101 (53%)
Frame = -2 / +3
Query: 640 PSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYYXXXXXXXXXXXXXXXXGW 461
P ++PM ++++LW+ WAT G V DWS APF YR++ W
Sbjct: 3 PKNQPMRIYSSLWNADDWATTGGLVKTDWSKAPFTAYYRNFKATQFSTKSSLSSNSDAEW 182
Query: 460 MNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
+LD+ +RW ++ FM YNYC D RFPQG+P EC+
Sbjct: 183 QINELDAYGRRRLRWVQKYFMIYNYCNDLKRFPQGVPVECS 305
>emb|CR969619.1| mth4-23B8FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 772
Score = 58.3 bits (121), Expect(3) = 3e-021
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = -2 / -3
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P ++PM ++++LW+ WAT G V DW++APF SYR++
Sbjct: 443 FPKNQPMRIYSSLWNADDWATRGGLVKTDWTNAPFTASYRNF 318
Score = 57.9 bits (120), Expect(3) = 3e-021
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = -2 / -3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
W +QLDS + ++N+M YNYC D RFPQGLP EC * S
Sbjct: 290 WFTQQLDSTSQQRLSEVQKNYMIYNYCTDIKRFPQGLPTECTAS*LIS 147
Score = 27.6 bits (54), Expect(3) = 3e-021
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 736 HTYTIIWNPTSIL 698
HTY+I+WNP I+
Sbjct: 710 HTYSILWNPQRIV 672
>gb|DW015682.1|DW015682 EST1224643 MTY Medicago truncatula cDNA clone MTYA835, mRNA
sequence
Length = 893
Score = 53.8 bits (111), Expect(3) = 7e-021
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = -2 / +1
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYY 515
+P +PM ++ +LW+ WAT G DWS APF+ Y+S++
Sbjct: 577 FPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAGYKSFH 705
Score = 45.5 bits (93), Expect(3) = 7e-021
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 454 RQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQ 359
R LD+A+W +RW + + YNYC D R PQ
Sbjct: 784 RDLDAAQWRRLRWVRQKYTIYNYCTDRKRLPQ 879
Score = 40.0 bits (81), Expect(3) = 7e-021
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / +1
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADL 647
++ H Y+I+WN I+F VDD+ IR FK DL
Sbjct: 466 TKEFHRYSILWNMYQIVFFVDDVPIRVFKNSKDL 567
>gb|BQ155055.1|BQ155055 NF075G05IR1F1040 Irradiated Medicago truncatula cDNA clone
NF075G05IR 5', mRNA sequence
Length = 627
Score = 53.8 bits (111), Expect(3) = 7e-021
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = -2 / +1
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYY 515
+P +PM ++ +LW+ WAT G DWS APF+ Y+S++
Sbjct: 145 FPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAGYKSFH 273
Score = 45.5 bits (93), Expect(3) = 7e-021
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 454 RQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQ 359
R LD+A+W +RW + + YNYC D R PQ
Sbjct: 352 RDLDAAQWRRLRWVRQKYTIYNYCTDRKRLPQ 447
Score = 40.0 bits (81), Expect(3) = 7e-021
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / +1
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADL 647
++ H Y+I+WN I+F VDD+ IR FK DL
Sbjct: 34 TKEFHRYSILWNMYQIVFFVDDVPIRVFKNSKDL 135
>gb|BQ154454.1|BQ154454 NF071A09IR1F1069 Irradiated Medicago truncatula cDNA clone
NF071A09IR 5', mRNA sequence
Length = 596
Score = 53.8 bits (111), Expect(3) = 7e-021
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = -2 / +1
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSYY 515
+P +PM ++ +LW+ WAT G DWS APF+ Y+S++
Sbjct: 145 FPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAGYKSFH 273
Score = 45.5 bits (93), Expect(3) = 7e-021
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 454 RQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQ 359
R LD+A+W +RW + + YNYC D R PQ
Sbjct: 352 RDLDAAQWRRLRWVRQKYTIYNYCTDRKRLPQ 447
Score = 40.0 bits (81), Expect(3) = 7e-021
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / +1
Query: 748 SRHTHTYTIIWNPTSILFKVDDLFIRSFKRYADL 647
++ H Y+I+WN I+F VDD+ IR FK DL
Sbjct: 34 TKEFHRYSILWNMYQIVFFVDDVPIRVFKNSKDL 135
>emb|CR299174.1| mte1-17C1FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 722
Score = 58.3 bits (121), Expect(3) = 9e-021
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = -2 / +1
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P ++PM ++++LW+ WAT G V DW++APF SYR++
Sbjct: 397 FPKNQPMRIYSSLWNADDWATRGGLVKTDWTNAPFTASYRNF 522
Score = 56.1 bits (116), Expect(3) = 9e-021
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
W +QLDS + ++N+M YNYC D RFPQGLP +C * S
Sbjct: 550 WFTQQLDSTSQQRLSEVQKNYMIYNYCTDIKRFPQGLPTKCTAS*LIS 693
Score = 27.6 bits (54), Expect(3) = 9e-021
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSIL 698
HTY+I+WNP I+
Sbjct: 130 HTYSILWNPQRIV 168
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 595,603,547
Number of Sequences: 392609
Number of extensions: 8045687
Number of successful extensions: 51696
Number of sequences better than 1.0e-020: 60
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 24956602110
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)